CmaCh18G001580 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G001580
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Location	Cma_Chr18: 798276 .. 801266 (+)
RNA-Seq Expression	CmaCh18G001580
Synteny	CmaCh18G001580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATCTTGTTGGGATAGGGTGGAAGAACGGTGGACATATGTATTTGAGGATGATCATTTAGATTTGGGACAAGTAATTGAAAAAAAAGAACAAAATAAATAAAGCAAATGGAAATAGTTGGATTCGAACACAAGAACGCGACGCAGATTGGGTTACGACCTGATAGTTAGGGCTAAATATCCATCTTCTCAATCACCAGATTTCTTCAGCTGGTTCAGTTTTTTTTTACTCTCTCGACATTCTGTCTTGCATCCACCTCCCAGTAGAACGAAGGTAATGATCTTTACTGTTCATCTTTAAAATCTACCTTCTTTCAATTTTACGATTTTTTTTTTTTGTTTAGATCTAGAATTTTCTCTGGAGTTCTTGAGTAATTCTATTCGCAGTCGCATACTTCAGATCGGATGTACTGATTCGATGTGTTTTGCTATTTCCATCTCTTTATCCCACTTATGAACGAAGAAGTTTTCGATTTTTCATGATATTTGTTTATCTTTGATGATATCGATACATGCTTTTGTGAGATTCTGCAAAATACGTGACCAATAAGACCTTCATTAGTTTTTTTTTGTACTCTTGGTTCCTTGTGTGATTCGCATCTTACATTGGAAAAAATTAGGTTCAGTAGGTTTCACTTTGTTATTTGAATGCAAGTTCTTCATTTATAACCTGGCGTCTGATTTATAAATCTTTTTTTTTACTGATTAATGGGATGTATTGCTGATTTTTGTTGAATTCTACATCCTTATACAGTTCAAACTTTGTGATGGCAACTGAATCCAAAACCGCTACTGAGGAAGTTAAGATTGATCTCTTTGAAGATGATGATGAGTTCGAAGAGTTTGAGATTAATGAAGGTATGGTTTATGATCTTACTACTTTCTTTCTTAATTCCTCCAAGTTCTTTACTACTGGTTCCACACTTCCAGCGTATATTATTTTTCATACATGGTTTCCCGACGTGCAATCAATAATGGTCTGGGTGTGATTTTGATTGATAAATTGTGGTCTTGGTTTCTTTGTTTCTAAATTCTAATTTTTAGATTCAAATAAAGGGGGAGAGAGATAGAGAGAGGCAAAATCCTTTTGCTGTTTAACAATTTCTAATTGTTGTAGACTCAAATGGTGGATATGCATTGATCTTGATATGCTCTCAAGGAAAGAAATAGAAATTCATGTTTTATAGATTGAGATGCGGGTGACGAAGCATGTTTTTTGTTGCTTGATTGGAAAATTTTGATGGGCAATACATCTGTGCTTTGAGGGAAAGAGATTAGAGGCATAAGGCCATGGATAAGACCATGGTTGAACCATCATTTTTCATGGTTTGCAGTTGATCCGTTCCATTATGTTTTAGAACGTGGTTAGAGTCGATGATTATCAATTGGAATGTGGTTAAAGGGACTTCCATATTCCGGGAGCAATAAGATATCTTCAAATTAAGCATCCAAATCATATGACTGGTCACTTGATGACATCTCATCTAGTTCTTGGACCCTTGAACTCTACTTATCCTTATACATAAAAAGCTAGAGTGATGTGGAAATGTTGGAGTTGTTTATAGATACGTAGCATTGTGAATAATTGTGCTCGAGATAGCTATGTTTGTCTCTTGATCTGTATATATTAAGTCCTTGTACGTGTCCATTTTGCTCGATATCTCCAGTTAATTTTTCTCCGAATTTTTGAACTCCACATAGATGTGTCATTGCTGGTGCCTTGGACTCTCGCTTGTGGCTTAGTAAGATCATATGTCTGCTCATTTCATTTTCACAATTAGAACATTACATGTCTTGAGCTCTTGAAGGATGTATGTGCTAAAGTTGCTGACTGACGTGTAGTGTCTTGATAATAAAATTGCTTGTAAAGGTTGGAAGTGATGTATAGGCATGCTAACGTGAATAGATTGTTTCGAGTACCTTCATCACTTAAGAACAAAGTGGTTAGAGACAGAAAGAGACAGAGCTTCTCGTTCAGGCACTTACTTTTTAACGGTTCTGGCAGTTAGTTACTGGGTTGATTTTCATACAAGTGAAGCACTGTGATACTCTCTGATGTGTGTCTAGCCTAGTAAATCGATTCTAATCACAAGTAACTTGAGCTCATTTCTCAGAGACCTCTCTCTTAGATGCTGATGTAGAGCTTGTTACGCGCAGCTTCTTGTTCATCCTCTCTCTCCTCTCCCTCACTGATAAAAAAAGAAAAACGAATCTGCTTCTTGATCTTTATGGGTTTGATAGAAATTTGGTTCCAATAGATATACTAATCTAAGCATTCTGTTATCATAGACGTTTCTGATGTTATTAACGATCATGTCAATGACAGAGTGGGAAGTCAAAGAAGAAGGGAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGATGACGATGATGTCAATGACGACTTCTCGTTGCAGCTTAGGAGAGAATTGGAGAGCTATACCGAGAAGAAATGAGAAGAAGTTTTGTCCTTAAATGTTTTCATCTTCAAGATCTCATGTTTTAACCAGGTCTTTTGATCCCATGTACATGATGGTATTATGAAACATTCTTAGGAGCCTAAAACATTGTTACCTTTCAGATCAGAACATTGGAAAATCGAGACGTTCGGCACCAAAGAAAACTTCATTTTCTTGTTGGCACGGAACATGATCTTCGTTCACGAATCTTGCTATGGTTTGCTTGAGATTTATAAGATGTTTCGTTCTGAATATTGGCAGGAATAGAAAACTAAGTTTGTACGTGGTGGTGCACTTTTATTGTTTTCCTTCAAAGAACACATGATGAGTCGACCAATTCTCTCGAGGATCAACAGATTTGAAATCCTTCTTTCTTTTGTATTCTTCTTTCTTTGGGTCTAGACCTGGCATATGTCTGTGTATACTGGTATCTACCCCTTCGATGTACATGACCATCGACAACCACGGTACATCTTGTTCTCGTGTTTGAGAATTCAATGAACATCGTGACATAGTCTTTACCACAAGA

mRNA sequence

ATGAGATCTTGTTGGGATAGGGTGGAAGAACGGTGGACATATGTATTTGAGGATGATCATTTAGATTTGGGACAAATTTCTTCAGCTGGTTCAGTTTTTTTTTACTCTCTCGACATTCTGTCTTGCATCCACCTCCCAGTAGAACGAAGTTCAAACTTTGTGATGGCAACTGAATCCAAAACCGCTACTGAGGAAGTTAAGATTGATCTCTTTGAAGATGATGATGAGTTCGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAAGAAGAAGGGAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGATGACGATGATGTCAATGACGACTTCTCGTTGCAGCTTAGGAGAGAATTGGAGAGCTATACCGAGAAGAAATGAGAAGAAGTTTTGTCCTTAAATGTTTTCATCTTCAAGATCTCATGTTTTAACCAGATCAGAACATTGGAAAATCGAGACGTTCGGCACCAAAGAAAACTTCATTTTCTTGTTGGCACGGAACATGATCTTCGTTCACGAATCTTGCTATGGTTTGCTTGAGATTTATAAGATGTTTCGTTCTGAATATTGGCAGGAATAGAAAACTAAGTTTGTACGTGGTGGTGCACTTTTATTGTTTTCCTTCAAAGAACACATGATGAGTCGACCAATTCTCTCGAGGATCAACAGATTTGAAATCCTTCTTTCTTTTGTATTCTTCTTTCTTTGGGTCTAGACCTGGCATATGTCTGTGTATACTGGTATCTACCCCTTCGATGTACATGACCATCGACAACCACGGTACATCTTGTTCTCGTGTTTGAGAATTCAATGAACATCGTGACATAGTCTTTACCACAAGA

Coding sequence (CDS)

ATGAGATCTTGTTGGGATAGGGTGGAAGAACGGTGGACATATGTATTTGAGGATGATCATTTAGATTTGGGACAAATTTCTTCAGCTGGTTCAGTTTTTTTTTACTCTCTCGACATTCTGTCTTGCATCCACCTCCCAGTAGAACGAAGTTCAAACTTTGTGATGGCAACTGAATCCAAAACCGCTACTGAGGAAGTTAAGATTGATCTCTTTGAAGATGATGATGAGTTCGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAAGAAGAAGGGAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGATGACGATGATGTCAATGACGACTTCTCGTTGCAGCTTAGGAGAGAATTGGAGAGCTATACCGAGAAGAAATGA

Protein sequence

MRSCWDRVEERWTYVFEDDHLDLGQISSAGSVFFYSLDILSCIHLPVERSSNFVMATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK

Homology

[Close]

BLAST of CmaCh18G001580 vs. ExPASy Swiss-Prot
Match: Q9XIR8 (Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1(I) PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.8e-22
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 55  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFS 114
           MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS
Sbjct: 1   MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 115 LQLRRELESYTEKK 128
            QLR+ELE+ T+KK
Sbjct: 61  RQLRKELENGTDKK 74

[Close]

BLAST of CmaCh18G001580 vs. ExPASy Swiss-Prot
Match: Q9FL96 (Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.7e-21
Identity = 53/73 (72.60%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 55  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 114
           MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1   MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 115 QLRRELESYTEKK 128
           QL++ELE+ +EKK
Sbjct: 61  QLKKELENASEKK 73

[Close]

BLAST of CmaCh18G001580 vs. ExPASy Swiss-Prot
Match: Q3ZBR6 (26S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 64  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESY 123
           + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +
Sbjct: 6   QPVDLGLLEEDDEFEEFPA-EDWAGLDEDED-AHVWEDNWDDDNVEDDFSNQLRAELEKH 65

Query: 124 TEK 127
             K
Sbjct: 66  GYK 66

[Close]

BLAST of CmaCh18G001580 vs. ExPASy Swiss-Prot
Match: P60896 (26S proteasome complex subunit SEM1 OS=Homo sapiens OX=9606 GN=SEM1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 64  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESY 123
           + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +
Sbjct: 6   QPVDLGLLEEDDEFEEFPA-EDWAGLDEDED-AHVWEDNWDDDNVEDDFSNQLRAELEKH 65

Query: 124 TEK 127
             K
Sbjct: 66  GYK 66

[Close]

BLAST of CmaCh18G001580 vs. ExPASy Swiss-Prot
Match: P60897 (26S proteasome complex subunit SEM1 OS=Mus musculus OX=10090 GN=Sem1 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 64  EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESY 123
           + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +
Sbjct: 6   QPVDLGLLEEDDEFEEFPA-EDWAGLDEDED-AHVWEDNWDDDNVEDDFSNQLRAELEKH 65

Query: 124 TEK 127
             K
Sbjct: 66  GYK 66

[Close]

BLAST of CmaCh18G001580 vs. ExPASy TrEMBL
Match: A0A6J1GSC9 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita moschata OX=3662 GN=LOC111457056 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.6e-30
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 55  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 114
           MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1   MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 115 QLRRELESYTEKK 128
           QLRRELESYTEKK
Sbjct: 61  QLRRELESYTEKK 73

[Close]

BLAST of CmaCh18G001580 vs. ExPASy TrEMBL
Match: A0A6J1KGG4 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC111495037 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 55  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 114
           MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1   MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 115 QLRRELESYTEKK 128
           QLRRELES TEKK
Sbjct: 61  QLRRELESNTEKK 73

[Close]

BLAST of CmaCh18G001580 vs. ExPASy TrEMBL
Match: A0A6J1ECF8 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita moschata OX=3662 GN=LOC111431292 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 55  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 114
           MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1   MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 115 QLRRELESYTEKK 128
           QLRRELES TEKK
Sbjct: 61  QLRRELESNTEKK 73

[Close]

BLAST of CmaCh18G001580 vs. ExPASy TrEMBL
Match: A0A5A7UJ57 (Putative 26S proteasome complex subunit sem1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00610 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 55  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 114
           MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1   MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 115 QLRRELESYTEKK 128
           QLRRELES TEKK
Sbjct: 61  QLRRELESNTEKK 73

[Close]

BLAST of CmaCh18G001580 vs. ExPASy TrEMBL
Match: A0A0A0LU33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046000 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 55  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 114
           MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1   MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 115 QLRRELESYTEKK 128
           QLRRELES TEKK
Sbjct: 61  QLRRELESNTEKK 73

[Close]

BLAST of CmaCh18G001580 vs. NCBI nr
Match: KAG6573049.1 (Protein DELETION OF SUV3 SUPPRESSOR 1(I), partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168.3 bits (425), Expect = 4.2e-38
Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 35  YSLDILSCIHLPVERSSNFVMATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKE 94
           + + ILSC+HL VERSSNFVMATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKE
Sbjct: 15  FVIRILSCVHLLVERSSNFVMATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKE 74

Query: 95  ITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK 128
           ITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
Sbjct: 75  ITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK 107

[Close]

BLAST of CmaCh18G001580 vs. NCBI nr
Match: XP_022954951.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata] >KAG7012237.1 Protein DELETION OF SUV3 SUPPRESSOR 1(I), partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140.6 bits (353), Expect = 9.5e-30
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 55  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 114
           MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1   MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 115 QLRRELESYTEKK 128
           QLRRELESYTEKK
Sbjct: 61  QLRRELESYTEKK 73

[Close]

BLAST of CmaCh18G001580 vs. NCBI nr
Match: XP_022923645.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata] >XP_022923646.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata] >XP_023000666.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima] >XP_023000667.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima] >XP_023519106.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita pepo subsp. pepo] >XP_023519107.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.0 bits (341), Expect = 2.3e-28
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 55  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 114
           MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1   MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 115 QLRRELESYTEKK 128
           QLRRELES TEKK
Sbjct: 61  QLRRELESNTEKK 73

[Close]

BLAST of CmaCh18G001580 vs. NCBI nr
Match: XP_004152470.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I) [Cucumis sativus] >XP_008438249.1 PREDICTED: protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucumis melo] >KAA0055220.1 putative 26S proteasome complex subunit sem1-1 [Cucumis melo var. makuwa] >KGN64302.1 hypothetical protein Csa_013524 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 2.3e-28
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 55  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 114
           MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1   MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 115 QLRRELESYTEKK 128
           QLRRELES TEKK
Sbjct: 61  QLRRELESNTEKK 73

[Close]

BLAST of CmaCh18G001580 vs. NCBI nr
Match: XP_038893721.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Benincasa hispida] >XP_038893722.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Benincasa hispida])

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-27
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 55  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 114
           MATESKTATEEVK+DLFEDDDEFEEFEINEEWEVKEEGKE+TQQWEDDWDDDDVNDDFSL
Sbjct: 1   MATESKTATEEVKMDLFEDDDEFEEFEINEEWEVKEEGKEVTQQWEDDWDDDDVNDDFSL 60

Query: 115 QLRRELESYTEKK 128
           QLRRELES  EKK
Sbjct: 61  QLRRELESNAEKK 73

[Close]

BLAST of CmaCh18G001580 vs. TAIR 10
Match: AT1G64750.1 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 105.1 bits (261), Expect = 4.1e-23
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 55  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFS 114
           MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS
Sbjct: 1   MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 115 LQLRRELESYTEKK 128
            QLR+ELE+ T+KK
Sbjct: 61  RQLRKELENGTDKK 74

[Close]

BLAST of CmaCh18G001580 vs. TAIR 10
Match: AT1G64750.2 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 105.1 bits (261), Expect = 4.1e-23
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 55  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFS 114
           MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS
Sbjct: 1   MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 115 LQLRRELESYTEKK 128
            QLR+ELE+ T+KK
Sbjct: 61  RQLRKELENGTDKK 74

[Close]

BLAST of CmaCh18G001580 vs. TAIR 10
Match: AT5G45010.1 (DSS1 homolog on chromosome V )

HSP 1 Score: 102.4 bits (254), Expect = 2.7e-22
Identity = 53/73 (72.60%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 55  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 114
           MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1   MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 115 QLRRELESYTEKK 128
           QL++ELE+ +EKK
Sbjct: 61  QLKKELENASEKK 73

[Close]

BLAST of CmaCh18G001580 vs. TAIR 10
Match: AT1G64750.3 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 85.1 bits (209), Expect = 4.4e-17
Identity = 57/115 (49.57%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 55  MATESKTATEE-VKIDLFEDDDEFEEFEINE----------------------------- 114
           MA E K AT E VK+DLFEDDDEFEEFEINE                             
Sbjct: 1   MAAEPKAATAEVVKMDLFEDDDEFEEFEINEVDSSDLTSSCIERIDKDGLVYELSRSDMK 60

Query: 115 ------------EWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK 128
                       +W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Sbjct: 61  TNLFDVNFRCEIDWLEKEEVKEVSQQWEDDWDDDDVNDDFSRQLRKELENGTDKK 115

The following BLAST results are available for this feature:

BLAST of CmaCh18G001580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIR8	5.8e-22	77.03	Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1...	[more]
Q9FL96	3.7e-21	72.60	Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) ...	[more]
Q3ZBR6	2.2e-05	50.79	26S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1	[more]
P60896	2.2e-05	50.79	26S proteasome complex subunit SEM1 OS=Homo sapiens OX=9606 GN=SEM1 PE=1 SV=1	[more]
P60897	2.2e-05	50.79	26S proteasome complex subunit SEM1 OS=Mus musculus OX=10090 GN=Sem1 PE=3 SV=1	[more]

BLAST of CmaCh18G001580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GSC9	4.6e-30	100.00	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1KGG4	1.1e-28	97.26	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1ECF8	1.1e-28	97.26	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5A7UJ57	1.1e-28	97.26	Putative 26S proteasome complex subunit sem1-1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0LU33	1.1e-28	97.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046000 PE=4 SV=1	[more]

BLAST of CmaCh18G001580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573049.1	4.2e-38	93.55	Protein DELETION OF SUV3 SUPPRESSOR 1(I), partial [Cucurbita argyrosperma subsp....	[more]
XP_022954951.1	9.5e-30	100.00	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata] >KAG7012237.1...	[more]
XP_022923645.1	2.3e-28	97.26	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata] >XP_022923646...	[more]
XP_004152470.1	2.3e-28	97.26	protein DELETION OF SUV3 SUPPRESSOR 1(I) [Cucumis sativus] >XP_008438249.1 PREDI...	[more]
XP_038893721.1	1.2e-27	94.52	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Benincasa hispida] >XP_038893722....	[more]

BLAST of CmaCh18G001580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64750.1	4.1e-23	77.03	deletion of SUV3 suppressor 1(I)	[more]
AT1G64750.2	4.1e-23	77.03	deletion of SUV3 suppressor 1(I)	[more]
AT5G45010.1	2.7e-22	72.60	DSS1 homolog on chromosome V	[more]
AT1G64750.3	4.4e-17	49.57	deletion of SUV3 suppressor 1(I)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007834	DSS1/SEM1	SMART	SM01385	DSS1_SEM1_2	coord: 63..122 e-value: 8.1E-23 score: 91.8
IPR007834	DSS1/SEM1	PFAM	PF05160	DSS1_SEM1	coord: 64..121 e-value: 4.6E-17 score: 61.9
IPR007834	DSS1/SEM1	PANTHER	PTHR16771	26 PROTEASOME COMPLEX SUBUNIT DSS1	coord: 54..127
None	No IPR available	PANTHER	PTHR16771:SF8	OS01G0316800 PROTEIN	coord: 54..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G001580.1	CmaCh18G001580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0043248	proteasome assembly
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0008541	proteasome regulatory particle, lid subcomplex
molecular_function	GO:0004842	ubiquitin-protein transferase activity