CmaCh17G000670 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTGTATCATACTAGGCGCTCTCTCTCATTCTCCCCCAAATCTATCGAATTCGAACTGGAATTCATTTCTCTATGAGGACCGGAATGCGGTATTACGCCGGCGGCGAGGATCATCGGCAGGAATCTCATTTCCTCGAAGCTTGTTTTCTCTGCCGGAGGCCGCTCGGATTCAACAGAGACATTTTCATGTACAGGTGAGTGACTGCGATTCGAATTCGATTAATCGCTTCTCGATTTCAATTTCTAGGTTTTTTGTTTTTGAATTTCGTTACTGACGGATTGGATTGGATTTCAGAGGAAATACGCCGTTCTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAGATCGACGAAGCAAAGGAGAAGAGCCGGAGAATCTCGTCTTCGTCGTCGTCGTCGTCGTCGTCTTCGGCGGATAAAACTGCGGCGTCTAGTAAGAAGAATGTGCGAACGGATACAGTTGCAGTGGCGTGAGATTCAATGAAGAAATTTTGCGAAAAGTTTTCGAATGCGAGAGGAAAAGGTTTTTTTCTTCTTCAGATTGAGTGCAGATTGTGGAGATTGAGAAACGTTTGAAATCTCTTCCTGTGGAGAAGATCGGATTGGCAGACGCTATACAGAACTGTTCTGCTTTCAATCTATTTTTCCTTTTTTTTTTAGGGTTTATGAAGATATTGCTCTGTTTACTATTTCTGTGGAAAAGAAATTGATGATCTGCCATGGAAATTCTCTTCAAAATTTTACGAAATTATTAAACTGGAGACATTATTGCAAATAATCATTATTTATTTATTTATTCTCTCTTTTTTTTGGG CTTTGTATCATACTAGGCGCTCTCTCTCATTCTCCCCCAAATCTATCGAATTCGAACTGGAATTCATTTCTCTATGAGGACCGGAATGCGGTATTACGCCGGCGGCGAGGATCATCGGCAGGAATCTCATTTCCTCGAAGCTTGTTTTCTCTGCCGGAGGCCGCTCGGATTCAACAGAGACATTTTCATGTACAGAGGAAATACGCCGTTCTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAGATCGACGAAGCAAAGGAGAAGAGCCGGAGAATCTCGTCTTCGTCGTCGTCGTCGTCGTCGTCTTCGGCGGATAAAACTGCGGCGTCTAGTAAGAAGAATGTGCGAACGGATACAGTTGCAGTGGCGTGAGATTCAATGAAGAAATTTTGCGAAAAGTTTTCGAATGCGAGAGGAAAAGGTTTTTTTCTTCTTCAGATTGAGTGCAGATTGTGGAGATTGAGAAACGTTTGAAATCTCTTCCTGTGGAGAAGATCGGATTGGCAGACGCTATACAGAACTGTTCTGCTTTCAATCTATTTTTCCTTTTTTTTTTAGGGTTTATGAAGATATTGCTCTGTTTACTATTTCTGTGGAAAAGAAATTGATGATCTGCCATGGAAATTCTCTTCAAAATTTTACGAAATTATTAAACTGGAGACATTATTGCAAATAATCATTATTTATTTATTTATTCTCTCTTTTTTTTGGG ATGAGGACCGGAATGCGGTATTACGCCGGCGGCGAGGATCATCGGCAGGAATCTCATTTCCTCGAAGCTTGTTTTCTCTGCCGGAGGCCGCTCGGATTCAACAGAGACATTTTCATGTACAGAGGAAATACGCCGTTCTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAGATCGACGAAGCAAAGGAGAAGAGCCGGAGAATCTCGTCTTCGTCGTCGTCGTCGTCGTCGTCTTCGGCGGATAAAACTGCGGCGTCTAGTAAGAAGAATGTGCGAACGGATACAGTTGCAGTGGCGTGA MRTGMRYYAGGEDHRQESHFLEACFLCRRPLGFNRDIFMYRGNTPFCSKECRQEQIEIDEAKEKSRRISSSSSSSSSSSADKTAASSKKNVRTDTVAVA Homology
BLAST of CmaCh17G000670 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 8.2e-16 Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 0
BLAST of CmaCh17G000670 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.8e-15 Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of CmaCh17G000670 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 4.1e-15 Identity = 50/95 (52.63%), Postives = 62/95 (65.26%), Query Frame = 0
BLAST of CmaCh17G000670 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 8.8e-10 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of CmaCh17G000670 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.0e-09 Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 0
BLAST of CmaCh17G000670 vs. ExPASy TrEMBL
Match: A0A6J1L079 (uncharacterized protein LOC111499186 OS=Cucurbita maxima OX=3661 GN=LOC111499186 PE=3 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 5.1e-45 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of CmaCh17G000670 vs. ExPASy TrEMBL
Match: A0A6J1H3Y3 (uncharacterized protein LOC111460275 OS=Cucurbita moschata OX=3662 GN=LOC111460275 PE=3 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 5.0e-40 Identity = 91/99 (91.92%), Postives = 94/99 (94.95%), Query Frame = 0
BLAST of CmaCh17G000670 vs. ExPASy TrEMBL
Match: A0A0A0LHK0 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G118280 PE=3 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 4.6e-38 Identity = 87/99 (87.88%), Postives = 93/99 (93.94%), Query Frame = 0
BLAST of CmaCh17G000670 vs. ExPASy TrEMBL
Match: A0A6J1KJX8 (uncharacterized protein LOC111494701 OS=Cucurbita maxima OX=3661 GN=LOC111494701 PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.7e-36 Identity = 82/99 (82.83%), Postives = 88/99 (88.89%), Query Frame = 0
BLAST of CmaCh17G000670 vs. ExPASy TrEMBL
Match: A0A6J1HKB3 (uncharacterized protein LOC111464337 OS=Cucurbita moschata OX=3662 GN=LOC111464337 PE=3 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35 Identity = 81/99 (81.82%), Postives = 88/99 (88.89%), Query Frame = 0
BLAST of CmaCh17G000670 vs. NCBI nr
Match: XP_023006470.1 (uncharacterized protein LOC111499186 [Cucurbita maxima]) HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of CmaCh17G000670 vs. NCBI nr
Match: XP_023548734.1 (uncharacterized protein LOC111807300 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 178.7 bits (452), Expect = 2.4e-41 Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0
BLAST of CmaCh17G000670 vs. NCBI nr
Match: KAG6574826.1 (FCS-Like Zinc finger 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 178.3 bits (451), Expect = 3.2e-41 Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0
BLAST of CmaCh17G000670 vs. NCBI nr
Match: KAG7013404.1 (hypothetical protein SDJN02_23570 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 177.9 bits (450), Expect = 4.2e-41 Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of CmaCh17G000670 vs. NCBI nr
Match: XP_022959227.1 (uncharacterized protein LOC111460275 [Cucurbita moschata]) HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39 Identity = 91/99 (91.92%), Postives = 94/99 (94.95%), Query Frame = 0
BLAST of CmaCh17G000670 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 84.3 bits (207), Expect = 5.8e-17 Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 0
BLAST of CmaCh17G000670 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 83.2 bits (204), Expect = 1.3e-16 Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of CmaCh17G000670 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 82.0 bits (201), Expect = 2.9e-16 Identity = 50/95 (52.63%), Postives = 62/95 (65.26%), Query Frame = 0
BLAST of CmaCh17G000670 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 64.3 bits (155), Expect = 6.3e-11 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of CmaCh17G000670 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-10 Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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