CmaCh16G010050 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G010050
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	F-box protein PP2-A12-like
Location	Cma_Chr16: 7742864 .. 7745147 (+)
RNA-Seq Expression	CmaCh16G010050
Synteny	CmaCh16G010050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAATAGCGGCAAGGAGAAGCAGCCATGGATTTTAGATATATAAATATTTGAGGTTTTGGAGCAAAAAAGATTCGATTCCGCCTTCAAATTCCTCCGCCCACTTCGATTTTTAATCCCCAAACCCCAAATATCTACAATAATCATCATTCCTCGCTGTTTTCCTTCACTTTCTCACTAAACAAACACCCGCTTGATTCTTGTTTTCTCAAAAAACCGACGAATCCAAGCAACCCATCTCCTTAATTCTCTCTTTTTTTCGTATTCAATCAACCCCTTTTGATTTTTCTCTCATGATCTTCTTCCTTCTCTAATGGGTCTTAATTTCTCTTCGTTTTTTTGCCTCCGTAATGGCTCTCACCCACCGTCGCCACCGCCGTATCCCGGCCTCGGGGACTTGCCGGAGAACTGCGTGGCGGATGTTTTGGGGCATTTGAGTCCGGTGGAGATTTGTAGACTTGCGAGGTTGAATCGGGCCTTTCGTGGGGCTTCCTGGGCTGATTTCGTTTGGGATTCCAAATTGCCGTCTAATTATAGGGTTCTTGTTCAACGATTGTTTGGTGATTTTGTTCAGATTATGAGTAAAAGAGAGATTTATACGAAGCTTTGTCAACAGAATCCATTGGATGGTGGAAATAAGGTAAACTTAATTTCGAAATTAGGGCTTTGATTTCGTTGGTTTCTCTTCTGCATTGTTGATTTTGTTTTCGCTCTCGTTTCAGAAAGTTTGGCTGGATAAACATTCTGGTGGTGTTTGTTTATCGATTTCTTCCATGGATTTGAGGATTACTGGGATTGATGATCGGAGGTATTGGAATCGCATCTCCACTGAAGAATCGAGGTCAGTCAGATTCATTGGAATGAATATTTTGAATCAATCTATGCTTGTTCTTATCATTATTGTTTGAGTTTTTGCTTGCTGAATTCATGGAACATGGTTGAATGGATCTTGTTGTTCTATATTAACAGAATTATTCCAAGTTTGGTAAGAACAATGATTTGTTTTGGATATAAGTTCTTCCCTGGATTCATGTGGGAAATATGTCTGCCTCCAAAACGTATAGTTGGGGAGGAGAACCAAACATTCATTATAAGGGTGTAGAAACCTCTCCGTAGTAGTAGCGTTTTAAAAACCTTGAAGGGAAAGCCCGAAAAGGACAATATCTGCTAGCGATGCGATGGGCTTGGGCAAGCTGAGCCTTGAAGGAGGGTGGACACGAGGTAGTGTGCCAGCGATGACGTTGGGGCCCGAAGGAGGGTGGATTGTGAGAACCCATATCGGTTGGGGAGGAGAATAAAACATTATTTATAAAAGCGGGGAAACCTCTCCCTAATAGACGCGTTTTAAAAACGTTGTGGGCAAGCTTATCAAAGCGCTATAGTTATGGAATGCTTATCAAAGCGTTTTGCACATAAATTGTGTCGAAAAACAATCTTTTATGCGTATTGGTATCGGTTTCAGTTGTGTTCTTGATCAACTCATTGATATTTGAAGATCTTTTGAGGCTGATGGAACTGAAAGGATGTATATAAGTTAGTGTAATCAGTGAACTCTGTGATTTTGTCGTCTGCATCGTTGAGAGGGAACGAACTGATATCGATTTTTTCATTTTCTTGCTTAGATTCCACACTGTTGCATATCTTCAGCAAGTATGGTGGTTTGAAGTTGGTGGAGAGGTCGACTTTCCGTTTCCACCGGGAAGTTACAGTCTATACTTCAGGTTACAATTGGGTCGGACATCGAAGAGGTTTGGGCGTCGAATCTGTAACCTCGAGCACGTTCATGGTTGGAACATAAAGCCTGTGCAATTCCAGCTTTGGACTTCAGATGGTCAGCATGCTAAAACTCGATGCTATTTAGTGGAATCTGGGAAATGGACTCTGTATCGTGCAGGTAACTTCAATGTCGATGCTCGAAATGAATCGACAAGGGTCAAATTCTCTATGACTCAGATCGACTGCACGCACACGAAAGGCGGGCTGTGTTTAGATGCAGTGATGATCTGCCCGGTCGAGTACGAACAGATATCCCAGTGTCGTTGACTCGTTCGGTCTGCATTTTGTTGTAGTTAGAAAATGTGTAAAAAAACATAGGTGAGTAAGAGAGAAGAAGATTATATTTTTGATGATAGCTTCTCAAATGATGATTGGCTTTGTTTTTTGGTAAGCCTATAGTAGTTTGGGTTGGAAACGAGGGAATATTTATCGTTTTTGTTCGATAATTGTTTGATATTTTAATTTTAGATTCGATGATGATTTCACTTCATTTTCATTCTTTCGATTTA

mRNA sequence

GCAAATAGCGGCAAGGAGAAGCAGCCATGGATTTTAGATATATAAATATTTGAGGTTTTGGAGCAAAAAAGATTCGATTCCGCCTTCAAATTCCTCCGCCCACTTCGATTTTTAATCCCCAAACCCCAAATATCTACAATAATCATCATTCCTCGCTGTTTTCCTTCACTTTCTCACTAAACAAACACCCGCTTGATTCTTGTTTTCTCAAAAAACCGACGAATCCAAGCAACCCATCTCCTTAATTCTCTCTTTTTTTCGTATTCAATCAACCCCTTTTGATTTTTCTCTCATGATCTTCTTCCTTCTCTAATGGGTCTTAATTTCTCTTCGTTTTTTTGCCTCCGTAATGGCTCTCACCCACCGTCGCCACCGCCGTATCCCGGCCTCGGGGACTTGCCGGAGAACTGCGTGGCGGATGTTTTGGGGCATTTGAGTCCGGTGGAGATTTGTAGACTTGCGAGGTTGAATCGGGCCTTTCGTGGGGCTTCCTGGGCTGATTTCGTTTGGGATTCCAAATTGCCGTCTAATTATAGGGTTCTTGTTCAACGATTGTTTGGTGATTTTGTTCAGATTATGAGTAAAAGAGAGATTTATACGAAGCTTTGTCAACAGAATCCATTGGATGGTGGAAATAAGAAAGTTTGGCTGGATAAACATTCTGGTGGTGTTTGTTTATCGATTTCTTCCATGGATTTGAGGATTACTGGGATTGATGATCGGAGGTATTGGAATCGCATCTCCACTGAAGAATCGAGATTCCACACTGTTGCATATCTTCAGCAAGTATGGTGGTTTGAAGTTGGTGGAGAGGTCGACTTTCCGTTTCCACCGGGAAGTTACAGTCTATACTTCAGGTTACAATTGGGTCGGACATCGAAGAGGTTTGGGCGTCGAATCTGTAACCTCGAGCACGTTCATGGTTGGAACATAAAGCCTGTGCAATTCCAGCTTTGGACTTCAGATGGTCAGCATGCTAAAACTCGATGCTATTTAGTGGAATCTGGGAAATGGACTCTGTATCGTGCAGGTAACTTCAATGTCGATGCTCGAAATGAATCGACAAGGGTCAAATTCTCTATGACTCAGATCGACTGCACGCACACGAAAGGCGGGCTGTGTTTAGATGCAGTGATGATCTGCCCGGTCGAGTACGAACAGATATCCCAGTGTCGTTGACTCGTTCGGTCTGCATTTTGTTGTAGTTAGAAAATGTGTAAAAAAACATAGGTGAGTAAGAGAGAAGAAGATTATATTTTTGATGATAGCTTCTCAAATGATGATTGGCTTTGTTTTTTGGTAAGCCTATAGTAGTTTGGGTTGGAAACGAGGGAATATTTATCGTTTTTGTTCGATAATTGTTTGATATTTTAATTTTAGATTCGATGATGATTTCACTTCATTTTCATTCTTTCGATTTA

Coding sequence (CDS)

ATGGGTCTTAATTTCTCTTCGTTTTTTTGCCTCCGTAATGGCTCTCACCCACCGTCGCCACCGCCGTATCCCGGCCTCGGGGACTTGCCGGAGAACTGCGTGGCGGATGTTTTGGGGCATTTGAGTCCGGTGGAGATTTGTAGACTTGCGAGGTTGAATCGGGCCTTTCGTGGGGCTTCCTGGGCTGATTTCGTTTGGGATTCCAAATTGCCGTCTAATTATAGGGTTCTTGTTCAACGATTGTTTGGTGATTTTGTTCAGATTATGAGTAAAAGAGAGATTTATACGAAGCTTTGTCAACAGAATCCATTGGATGGTGGAAATAAGAAAGTTTGGCTGGATAAACATTCTGGTGGTGTTTGTTTATCGATTTCTTCCATGGATTTGAGGATTACTGGGATTGATGATCGGAGGTATTGGAATCGCATCTCCACTGAAGAATCGAGATTCCACACTGTTGCATATCTTCAGCAAGTATGGTGGTTTGAAGTTGGTGGAGAGGTCGACTTTCCGTTTCCACCGGGAAGTTACAGTCTATACTTCAGGTTACAATTGGGTCGGACATCGAAGAGGTTTGGGCGTCGAATCTGTAACCTCGAGCACGTTCATGGTTGGAACATAAAGCCTGTGCAATTCCAGCTTTGGACTTCAGATGGTCAGCATGCTAAAACTCGATGCTATTTAGTGGAATCTGGGAAATGGACTCTGTATCGTGCAGGTAACTTCAATGTCGATGCTCGAAATGAATCGACAAGGGTCAAATTCTCTATGACTCAGATCGACTGCACGCACACGAAAGGCGGGCTGTGTTTAGATGCAGTGATGATCTGCCCGGTCGAGTACGAACAGATATCCCAGTGTCGTTGA

Protein sequence

MGLNFSSFFCLRNGSHPPSPPPYPGLGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFGDFVQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRISTEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVHGWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAGNFNVDARNESTRVKFSMTQIDCTHTKGGLCLDAVMICPVEYEQISQCR

Homology

[Close]

BLAST of CmaCh16G010050 vs. ExPASy Swiss-Prot
Match: Q9LN77 (F-box protein PP2-A12 OS=Arabidopsis thaliana OX=3702 GN=P2A12 PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-100
Identity = 160/256 (62.50%), Postives = 202/256 (78.91%), Query Frame = 0


Query: 24  PGLGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFG 83
           PGLGDLPE CVA ++ +L PVEICR ++LNRAFRGASWAD VW+SKLP NYR +++++ G
Sbjct: 26  PGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILG 85

Query: 84  DFVQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRI 143
            F + + KR +Y  L + N  D   KKVW+DK + GVCLSIS+  L ITGIDDRRYW+ I
Sbjct: 86  GFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHI 145

Query: 144 STEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVH 203
            T+ESRF +VAYLQQ+WWFEV GE+DFPFP G+YS++FRLQLGR+ K FGRR+CN E VH
Sbjct: 146 PTDESRFSSVAYLQQIWWFEVDGEIDFPFPVGTYSIFFRLQLGRSGKWFGRRVCNTEQVH 205

Query: 204 GWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAGNFNV-DARNESTRVKFSMTQIDC 263
           GW+IKPV+FQLWT DGQ++ ++C L E G W  Y AG+  V ++   ST++KFSMTQIDC
Sbjct: 206 GWDIKPVRFQLWTEDGQYSSSQCMLTERGNWIHYHAGDVVVRESNRSSTKIKFSMTQIDC 265

Query: 264 THTKGGLCLDAVMICP 279
           THTKGGL LD+V++ P
Sbjct: 266 THTKGGLSLDSVVVYP 281

[Close]

BLAST of CmaCh16G010050 vs. ExPASy Swiss-Prot
Match: Q9CAN4 (F-box protein PP2-A11 OS=Arabidopsis thaliana OX=3702 GN=PP2A11 PE=1 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 5.9e-99
Identity = 158/279 (56.63%), Postives = 213/279 (76.34%), Query Frame = 0


Query: 1   MGLNFSSFFCLRNGSHPPSPPPYPGLGDLPENCVADVLGHLSPVEICRLARLNRAFRGAS 60
           MG  FS F    +  +       PGLGDLPE+CVA +L +L PVEICR ++LN AF GAS
Sbjct: 1   MGSGFSLFQKNLSSCYGDRDLLQPGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGAS 60

Query: 61  WADFVWDSKLPSNYRVLVQRLFGDFVQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGV 120
           WADFVW+SKLP +Y+++++++ G F   + KR+I+T L + N  D GNKK W+DK +GG+
Sbjct: 61  WADFVWESKLPPDYKLILEKILGSFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGL 120

Query: 121 CLSISSMDLRITGIDDRRYWNRISTEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLY 180
           CL  S+  L ITGIDDRRYW+ I +++SRF +VAY+QQ+WWF+V GE+DFPFP G+YS+Y
Sbjct: 121 CLCTSAKGLSITGIDDRRYWSHIPSDDSRFASVAYVQQIWWFQVDGEIDFPFPAGTYSVY 180

Query: 181 FRLQLGRTSKRFGRRICNLEHVHGWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAG 240
           FRLQLG+  KRFG ++ + E VHGWNIKPV+FQL T DGQH+ ++C L E+G W+ Y AG
Sbjct: 181 FRLQLGKPGKRFGWKVVDTEQVHGWNIKPVRFQLSTEDGQHSSSQCMLTEAGNWSHYHAG 240

Query: 241 NFNV-DARNESTRVKFSMTQIDCTHTKGGLCLDAVMICP 279
           +F V  +++ ST++KFSMTQIDCTHTKGGLC+D+V++ P
Sbjct: 241 DFVVGKSKSSSTKIKFSMTQIDCTHTKGGLCVDSVVVYP 279

[Close]

BLAST of CmaCh16G010050 vs. ExPASy Swiss-Prot
Match: Q9LEX0 (F-box protein PP2-A13 OS=Arabidopsis thaliana OX=3702 GN=PP2A13 PE=1 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.8e-95
Identity = 158/257 (61.48%), Postives = 200/257 (77.82%), Query Frame = 0


Query: 26  LGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFGDF 85
           L DLPENCVA ++  L P EICRLARLNR FR AS ADF+W+SKLP+NYRV+  ++F + 
Sbjct: 25  LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEI 84

Query: 86  -VQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRIS 145
            +  + K+++Y KL Q N  D G K++W+DK++G +CLSISS  LRITGIDDRRYW+ I 
Sbjct: 85  TLTKLIKKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIP 144

Query: 146 TEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVHG 205
           T+ESRF + AY+QQ+WWFEVGGE +  FP G+YSL+FR+QLG+TSKR GRRICN EH+HG
Sbjct: 145 TDESRFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIHG 204

Query: 206 WNIKPVQFQLWTSDGQHAKTRCYLVES-GKWTLYRAGNFNVDARNESTRVKFSMTQIDCT 265
           W+IKPV+FQL TSD Q A + CYL  + G W+ Y  G+F V   + ST +KFSMTQIDCT
Sbjct: 205 WDIKPVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDCT 264

Query: 266 HTKGGLCLDAVMICPVE 281
           HTKGGLC+D+V+I P E
Sbjct: 265 HTKGGLCIDSVLILPKE 281

[Close]

BLAST of CmaCh16G010050 vs. ExPASy Swiss-Prot
Match: Q9FJ80 (F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3702 GN=PP2A14 PE=1 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.3e-85
Identity = 143/264 (54.17%), Postives = 189/264 (71.59%), Query Frame = 0


Query: 25  GLGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFGD 84
           GL D+PENC+  +  ++ P EIC LAR+N++F  AS +D VW+ KLPSNY+ LV+R+  D
Sbjct: 20  GLEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILED 79

Query: 85  FVQ-------IMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDR 144
             Q       I  K+EIY +LC+ N  D G K+ WLDK SG V L+IS   ++ITGIDDR
Sbjct: 80  QQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDR 139

Query: 145 RYWNRISTEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRIC 204
           RYW  IS++ESRF ++ YL+Q+WW E  G++ F F PG YSL F++QLG+  ++ GR+ C
Sbjct: 140 RYWEHISSDESRFGSITYLRQIWWLEAVGKIRFEFAPGKYSLLFKIQLGKPIRKCGRKTC 199

Query: 205 NLEHVHGWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAGNFNVDARNESTRVKFSM 264
           +L+ VHGW+IKPV+FQL TSDGQ A +  +L ESG+W  + AG+F V+ +N    VKFSM
Sbjct: 200 SLDQVHGWDIKPVRFQLSTSDGQCAMSERHLDESGRWVYHHAGDFVVENQNSPVWVKFSM 259

Query: 265 TQIDCTHTKGGLCLDAVMICPVEY 282
            QIDCTHTKGGLCLD V+ICP EY
Sbjct: 260 LQIDCTHTKGGLCLDCVIICPFEY 283

[Close]

BLAST of CmaCh16G010050 vs. ExPASy Swiss-Prot
Match: Q9LF92 (F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3702 GN=PP2A15 PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 3.5e-83
Identity = 143/267 (53.56%), Postives = 185/267 (69.29%), Query Frame = 0


Query: 24  PGLGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFG 83
           PGLGD+PE+CVA V  +L+P EIC LA LNR+FRGA+ +D VW+ KLP NY+ L+  L  
Sbjct: 19  PGLGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLLPP 78

Query: 84  DFVQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRI 143
           +    +SK++I+  L +  P D  NK+VW+D+ +G VC++IS+  + ITGI+DRRYWN I
Sbjct: 79  ERYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWI 138

Query: 144 STEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVH 203
            TEESRFH VAYLQQ+WWFEV G V F  PPG YSL FR+ LGR +KR GRR+C+ E  H
Sbjct: 139 PTEESRFHVVAYLQQIWWFEVDGTVRFHLPPGVYSLSFRIHLGRFTKRLGRRVCHFELTH 198

Query: 204 GWNIKPVQFQLWTSDGQHAKTRCYLVE-----------SGKWTLYRAGNFNVDARNESTR 263
           GW++KPV+F L TSDGQ A    YL +            G W  YR G F V+    ST 
Sbjct: 199 GWDLKPVRFSLSTSDGQEASCEYYLDDVERNEALGKHKRGYWIEYRVGEFIVNGSEPSTE 258

Query: 264 VKFSMTQIDCTHTKGGLCLDAVMICPV 280
           +++SM QIDCTH+KGGLC+D+V I P+
Sbjct: 259 IQWSMKQIDCTHSKGGLCVDSVFINPI 285

[Close]

BLAST of CmaCh16G010050 vs. TAIR 10
Match: AT1G12710.1 (phloem protein 2-A12 )

HSP 1 Score: 367.5 bits (942), Expect = 1.0e-101
Identity = 160/256 (62.50%), Postives = 202/256 (78.91%), Query Frame = 0


Query: 24  PGLGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFG 83
           PGLGDLPE CVA ++ +L PVEICR ++LNRAFRGASWAD VW+SKLP NYR +++++ G
Sbjct: 26  PGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILG 85

Query: 84  DFVQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRI 143
            F + + KR +Y  L + N  D   KKVW+DK + GVCLSIS+  L ITGIDDRRYW+ I
Sbjct: 86  GFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHI 145

Query: 144 STEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVH 203
            T+ESRF +VAYLQQ+WWFEV GE+DFPFP G+YS++FRLQLGR+ K FGRR+CN E VH
Sbjct: 146 PTDESRFSSVAYLQQIWWFEVDGEIDFPFPVGTYSIFFRLQLGRSGKWFGRRVCNTEQVH 205

Query: 204 GWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAGNFNV-DARNESTRVKFSMTQIDC 263
           GW+IKPV+FQLWT DGQ++ ++C L E G W  Y AG+  V ++   ST++KFSMTQIDC
Sbjct: 206 GWDIKPVRFQLWTEDGQYSSSQCMLTERGNWIHYHAGDVVVRESNRSSTKIKFSMTQIDC 265

Query: 264 THTKGGLCLDAVMICP 279
           THTKGGL LD+V++ P
Sbjct: 266 THTKGGLSLDSVVVYP 281

[Close]

BLAST of CmaCh16G010050 vs. TAIR 10
Match: AT1G63090.1 (phloem protein 2-A11 )

HSP 1 Score: 362.1 bits (928), Expect = 4.2e-100
Identity = 158/279 (56.63%), Postives = 213/279 (76.34%), Query Frame = 0


Query: 1   MGLNFSSFFCLRNGSHPPSPPPYPGLGDLPENCVADVLGHLSPVEICRLARLNRAFRGAS 60
           MG  FS F    +  +       PGLGDLPE+CVA +L +L PVEICR ++LN AF GAS
Sbjct: 1   MGSGFSLFQKNLSSCYGDRDLLQPGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGAS 60

Query: 61  WADFVWDSKLPSNYRVLVQRLFGDFVQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGV 120
           WADFVW+SKLP +Y+++++++ G F   + KR+I+T L + N  D GNKK W+DK +GG+
Sbjct: 61  WADFVWESKLPPDYKLILEKILGSFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGL 120

Query: 121 CLSISSMDLRITGIDDRRYWNRISTEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLY 180
           CL  S+  L ITGIDDRRYW+ I +++SRF +VAY+QQ+WWF+V GE+DFPFP G+YS+Y
Sbjct: 121 CLCTSAKGLSITGIDDRRYWSHIPSDDSRFASVAYVQQIWWFQVDGEIDFPFPAGTYSVY 180

Query: 181 FRLQLGRTSKRFGRRICNLEHVHGWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAG 240
           FRLQLG+  KRFG ++ + E VHGWNIKPV+FQL T DGQH+ ++C L E+G W+ Y AG
Sbjct: 181 FRLQLGKPGKRFGWKVVDTEQVHGWNIKPVRFQLSTEDGQHSSSQCMLTEAGNWSHYHAG 240

Query: 241 NFNV-DARNESTRVKFSMTQIDCTHTKGGLCLDAVMICP 279
           +F V  +++ ST++KFSMTQIDCTHTKGGLC+D+V++ P
Sbjct: 241 DFVVGKSKSSSTKIKFSMTQIDCTHTKGGLCVDSVVVYP 279

[Close]

BLAST of CmaCh16G010050 vs. TAIR 10
Match: AT3G61060.1 (phloem protein 2-A13 )

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-96
Identity = 158/257 (61.48%), Postives = 200/257 (77.82%), Query Frame = 0


Query: 26  LGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFGDF 85
           L DLPENCVA ++  L P EICRLARLNR FR AS ADF+W+SKLP+NYRV+  ++F + 
Sbjct: 25  LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEI 84

Query: 86  -VQIMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRIS 145
            +  + K+++Y KL Q N  D G K++W+DK++G +CLSISS  LRITGIDDRRYW+ I 
Sbjct: 85  TLTKLIKKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIP 144

Query: 146 TEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVHG 205
           T+ESRF + AY+QQ+WWFEVGGE +  FP G+YSL+FR+QLG+TSKR GRRICN EH+HG
Sbjct: 145 TDESRFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIHG 204

Query: 206 WNIKPVQFQLWTSDGQHAKTRCYLVES-GKWTLYRAGNFNVDARNESTRVKFSMTQIDCT 265
           W+IKPV+FQL TSD Q A + CYL  + G W+ Y  G+F V   + ST +KFSMTQIDCT
Sbjct: 205 WDIKPVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDCT 264

Query: 266 HTKGGLCLDAVMICPVE 281
           HTKGGLC+D+V+I P E
Sbjct: 265 HTKGGLCIDSVLILPKE 281

[Close]

BLAST of CmaCh16G010050 vs. TAIR 10
Match: AT3G61060.2 (phloem protein 2-A13 )

HSP 1 Score: 345.9 bits (886), Expect = 3.1e-95
Identity = 158/258 (61.24%), Postives = 200/258 (77.52%), Query Frame = 0


Query: 26  LGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFGDF 85
           L DLPENCVA ++  L P EICRLARLNR FR AS ADF+W+SKLP+NYRV+  ++F + 
Sbjct: 25  LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEI 84

Query: 86  -VQIMSKREIYTKLCQQNPLDGGNK-KVWLDKHSGGVCLSISSMDLRITGIDDRRYWNRI 145
            +  + K+++Y KL Q N  D G K ++W+DK++G +CLSISS  LRITGIDDRRYW+ I
Sbjct: 85  TLTKLIKKDLYAKLSQPNLFDDGTKQELWIDKNTGRLCLSISSKALRITGIDDRRYWSHI 144

Query: 146 STEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRICNLEHVH 205
            T+ESRF + AY+QQ+WWFEVGGE +  FP G+YSL+FR+QLG+TSKR GRRICN EH+H
Sbjct: 145 PTDESRFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIH 204

Query: 206 GWNIKPVQFQLWTSDGQHAKTRCYLVES-GKWTLYRAGNFNVDARNESTRVKFSMTQIDC 265
           GW+IKPV+FQL TSD Q A + CYL  + G W+ Y  G+F V   + ST +KFSMTQIDC
Sbjct: 205 GWDIKPVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDC 264

Query: 266 THTKGGLCLDAVMICPVE 281
           THTKGGLC+D+V+I P E
Sbjct: 265 THTKGGLCIDSVLILPKE 282

[Close]

BLAST of CmaCh16G010050 vs. TAIR 10
Match: AT5G52120.1 (phloem protein 2-A14 )

HSP 1 Score: 317.8 bits (813), Expect = 9.1e-87
Identity = 143/264 (54.17%), Postives = 189/264 (71.59%), Query Frame = 0


Query: 25  GLGDLPENCVADVLGHLSPVEICRLARLNRAFRGASWADFVWDSKLPSNYRVLVQRLFGD 84
           GL D+PENC+  +  ++ P EIC LAR+N++F  AS +D VW+ KLPSNY+ LV+R+  D
Sbjct: 20  GLEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILED 79

Query: 85  FVQ-------IMSKREIYTKLCQQNPLDGGNKKVWLDKHSGGVCLSISSMDLRITGIDDR 144
             Q       I  K+EIY +LC+ N  D G K+ WLDK SG V L+IS   ++ITGIDDR
Sbjct: 80  QQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDR 139

Query: 145 RYWNRISTEESRFHTVAYLQQVWWFEVGGEVDFPFPPGSYSLYFRLQLGRTSKRFGRRIC 204
           RYW  IS++ESRF ++ YL+Q+WW E  G++ F F PG YSL F++QLG+  ++ GR+ C
Sbjct: 140 RYWEHISSDESRFGSITYLRQIWWLEAVGKIRFEFAPGKYSLLFKIQLGKPIRKCGRKTC 199

Query: 205 NLEHVHGWNIKPVQFQLWTSDGQHAKTRCYLVESGKWTLYRAGNFNVDARNESTRVKFSM 264
           +L+ VHGW+IKPV+FQL TSDGQ A +  +L ESG+W  + AG+F V+ +N    VKFSM
Sbjct: 200 SLDQVHGWDIKPVRFQLSTSDGQCAMSERHLDESGRWVYHHAGDFVVENQNSPVWVKFSM 259

Query: 265 TQIDCTHTKGGLCLDAVMICPVEY 282
            QIDCTHTKGGLCLD V+ICP EY
Sbjct: 260 LQIDCTHTKGGLCLDCVIICPFEY 283

The following BLAST results are available for this feature:

BLAST of CmaCh16G010050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LN77	1.4e-100	62.50	F-box protein PP2-A12 OS=Arabidopsis thaliana OX=3702 GN=P2A12 PE=2 SV=1	[more]
Q9CAN4	5.9e-99	56.63	F-box protein PP2-A11 OS=Arabidopsis thaliana OX=3702 GN=PP2A11 PE=1 SV=1	[more]
Q9LEX0	1.8e-95	61.48	F-box protein PP2-A13 OS=Arabidopsis thaliana OX=3702 GN=PP2A13 PE=1 SV=1	[more]
Q9FJ80	1.3e-85	54.17	F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3702 GN=PP2A14 PE=1 SV=1	[more]
Q9LF92	3.5e-83	53.56	F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3702 GN=PP2A15 PE=2 SV=1	[more]

BLAST of CmaCh16G010050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12710.1	1.0e-101	62.50	phloem protein 2-A12	[more]
AT1G63090.1	4.2e-100	56.63	phloem protein 2-A11	[more]
AT3G61060.1	1.3e-96	61.48	phloem protein 2-A13	[more]
AT3G61060.2	3.1e-95	61.24	phloem protein 2-A13	[more]
AT5G52120.1	9.1e-87	54.17	phloem protein 2-A14	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 120..278 e-value: 6.6E-38 score: 130.0
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 28..57 e-value: 0.0023 score: 17.8
None	No IPR available	PANTHER	PTHR31960	F-BOX PROTEIN PP2-A15	coord: 1..284
None	No IPR available	PANTHER	PTHR31960:SF22	F-BOX PROTEIN PP2-A12	coord: 1..284
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 17..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G010050.1	CmaCh16G010050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding