CmaCh16G008100 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G008100
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Cyclic nucleotide-gated ion channel, putative
Location	Cma_Chr16: 4474722 .. 4478607 (+)
RNA-Seq Expression	CmaCh16G008100
Synteny	CmaCh16G008100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGTCAATTAAGACCAAAATTGTCTTTATGGATGAAATCAGTGAAGGGTTTGGCTGTACTTCCCCTCTTGTAATAATTCATCCTTGTCGATTATGCCCTCCACGCCAAACTGACACTCTCACATACAACACCACACAACAACAACAAACAAATCACTACACGTCTCTCCAATCTCCTCCTCCCTCCTCCCATGGCCACCTCCGACGACGACGAAGTAGAAAAAGAATTACAAGAACACGATGGTGGCTTCTGCCGGAGCCTCTACGGAGTCGGCTCGGTTCTCGACCCGAGAGCCAAATGGGTCCGAGAATGGAACCGGGTCTTCCTCCTCGTCTCCGCCGCTGGCCTCTTCGTGGACCCTCTCTTCCTCTACACGCTCTCCATAAGCGAGTCATGGATGTGCTTGTTTGTTGATGGGTGGTTAGCCATCACCGTCACCGTCCTCCGCTGCACCGCCGACGCCTTCCACCTTTGGAACATGTGGCTCCAGCTCAAGACTGCCACAAGATACTCCTTCGCCGGTGGAGCTGGCACCGCAGCCACGCCGGAGAATAGAGGCCTTAGAGATTCCACCCCACGCGCCGTCGCTCTCCGCTACTTCAAATCCAAAAAAGGCTTCTTCTTTGATCTCTTCGTTATTCTTCCACTTCCACAGGTATCATGCATATAATAATATAAATAAATTTCATAACCAACAATCTTTAGGAATGTTTTTACTTTTATTTTAATAAAATACTATCCAAATTTAAAATTTGCTAAACATAATAAATAATTGTTAGAAAAAAAACTGAAAAATGTCTAGAATTAAATAAATTTTTTCTTTTATTTTATTTATTTACATGAATTAATAGAATGTGGTGTTTATGAAACTCTGATTCTGGGCAGACGAACATGTGATTCTGGGCAGACGAATATAATTATGTTTTTTTTTTTAATTCGGGAATCTATTGGGATTCGATCTTTTTTTTAAAAAATTTAATTTTAAAATCTGTGAAGAATTCCTGACCGTTGGATAATCAATCATTTTTAATATAAATATATTTTCAAAAATTAATATTAATTTAAAATTTTTAGAATAAGTAAAAATGTGCATATTTGCAGGTGGTATTATGGGTAGTAATTCCAAGAATAATGAAAGAAGGATCAGTGACATTGGTGATGACAGTTTTGCTAATAGTATTTCTATTTCAATACTTACCCAAATTGTACCACTCGGTATGCCTGCTGCGGCGCCTCCAAAACCTGTCGGGGTTCATCTTTGGCACGGTCTGGTGGGGCATTGCCCTCAATCTCATTGCTTACTTTGTTGCTGCTCACGTAAGTGAATAATATCATATCATTATGGAGATTTGTGATTCATAACACGATTCTTATTAAACTTGTCTGAATGCAGGCTGCAGGCGCATGCTGGTACCTGTTGGGTGTGCAAAGAGCAGCCAAGTGCCTTAAAGAGCAATGCAGAGCCACGAGCAGCTGTGGGGTGAGGCTGTTGTCATGCAAAGATCGTATCTTTTATGGAGCCACCAAGATGGGAATGGGGAGAGACAGTGCAAGATTTGATTGGGCGAATAACAGGCAACCGAAATTCATGTGTTTGGATACTGCTGACAACTTTAATTATGGAGCTTATAAATGGACTGTTCAGCTTGTTGTCAACCAAAGTCGCTTGGAGAAGATCCTTTTTCCTATCTTTTGGGGTCTCATGACTCTTAGGTACTTCGCGCTTTTCTTCTAAACTTTTATGAAAGTTTACTAGGAGTCTAAGCTCTCGTGACTTTGCTTATAGTTTCTCCAAAAAAAAACTTCGTACCAATAGAGATATATTCCGTACTTATCAATCCATGATCATTTCTTAAATTAGCCAATGTAGGACTCTCTCCCAACAATCCTCCCATCGAACAAAGTATACTATAGAGCCTCCTTTGAGGTTTATGAAGCACTCGAACAACCTCACTTTAATCGAGGTTTAACTCCTTCTCTGGAGTCCTCAAATAAAGTACACCATTTGGTTGACACTTTTGACTATACCTTCGAGACTCAACTTCTTTGTTCGACATTTGAGAATTTTATTGACATGGTTAAGTTAAGGGCATTGTTATGATACCATGTCAGGAATCACGAACCTCTACAATGGTATGATATTGTCCACTTTGAGTATAAGTTTTCTTGTTTTGCTTTTAGTTTCCCCAAAATGCCACATACCAATGGAGATGTATTCCTTACTTATAAACGCATGATTATTTATTTAATTAGCCAATGTGTGACTCCCTACCAACAATCCTCAATAATACTTGTTTCATTATCGTCTTATCGTTGTTCTCACAAATTGTTTTGAAGAAAACTTTACAAAGTGATAACTTATTTTATTTACTAAACAGTACCTTTGGGAACTTGGAGAGCACCACGGAATGGCTGGAAGTTGTGTTCAATATCATTGTTCTCACCAGTGGACTCTTATTAGTCACCATGTTGATAGGAAATATCAAGGTAACCTCTTCAAGTTCGGATGGAAACTCAAAAATGGATCGTTATAATAAATTCCGTAGTATTGTATGTTGAGAATTGTTGAGAGAGGAATTCCATATCGACTAATTAAGGAGTTGATCATGGGTTTATAAGTAGGAATACTATCTCTAATAGTCATAAGAGTTTATGCTCAAAGTAGACAATATTATATCATTGTGGAGATTCGTAATTCTTAACCTTAAATGTGTGCGCAGGTGTTTTTGCATGCAACCACGTCAAAGAAACAAGGAATGCAACTAAAGATGAGGAATCTAGAGTTGTGGATGAGAAAGCGACATCTTCCACAAGGCTTCCGACAGCGTGTTCGGAACTACGAACGGCAACGTTGGGCAGCGATGCGCGGAGTTGACGAGTGCGAGATGATTAAAAACCTACCAGAAGGACTCCGGCGAGAGATAAAGTATCACCTTTGCTTGGATCTAGTTAGGCAGGTGCCATTGTTTCAACACATGGATGATCTTGTTCTTGAGAACATTTGTGACCGTGTCAAGTCCCTCATCTTCACCAAGGGCGAAACCGTAAGTTCTAACAACAAAACCTTTCATTTCCAATGATTATTATTAGATGAAAGTCTCACGTCCCCTAATTTAAAAAATGATCATAGGTTTATAATAAAAAAATACTTTTTCTATTGTTACGAGAGTTTATTCTCAAAGTGGACAAAAAGTCGTGTTGATCTAACCATTATAATTATGCCCAGATAACAAGAGAGGGCGACCCAGTTCAAAGAATGCTGTTTGTCGTTCGAGGGCATCTCCAAAGCAGCCAAGTCTTACGCGACGGCGTCAAAAGCTGCTGCATGTTGGGGCCAGGCAACTTTAGCGGCGACGAGCTTCTATCCTGGTGTCTCCGCCGCCCCTTCATAGAGCGCCTTCCGCCGTCCTCTTGCACTTTGGTGACATTGGAGACGACGGAGGCGTTTGGGTTGGAGGCGGAGGATGTCAAGTACGTAACCCAGCACTTTCGCTACACATTCGTCAACGACAAGGTCAAACGTAGCGCCCGCTACTACTCCCCTGGGTGGCGTACTTGGGCTGCCGTTGCCATCCAGCTTGCCTGGCGTCGTTACCGCCACCGGCTTACGTTAACGTCGTTGTCGTTTATTCGGCCTCGGCGACCCTTGTCGCGGTGCTCTTCCTTGGGGGAGGATCGCCTCCGCCTCTACACGGCGTTGCTTACTTCTCCCAAGCCCAATCAGGATCACTTCGATTTTTGAATCCATGTTGTGCATTTTTCTAATTATCTCGACTTCGAACTTGGAATTGATTGAATTTTCTGTTCTTTGGGTTGGTGGTACAAATTGAAATTATTGCCAGAGAATTTGTCAAGCTGGTTTATTATAATGGTTAGAATCGCAC

mRNA sequence

ATTGGTCAATTAAGACCAAAATTGTCTTTATGGATGAAATCAGTGAAGGGTTTGGCTGTACTTCCCCTCTTGTAATAATTCATCCTTGTCGATTATGCCCTCCACGCCAAACTGACACTCTCACATACAACACCACACAACAACAACAAACAAATCACTACACGTCTCTCCAATCTCCTCCTCCCTCCTCCCATGGCCACCTCCGACGACGACGAAGTAGAAAAAGAATTACAAGAACACGATGGTGGCTTCTGCCGGAGCCTCTACGGAGTCGGCTCGGTTCTCGACCCGAGAGCCAAATGGGTCCGAGAATGGAACCGGGTCTTCCTCCTCGTCTCCGCCGCTGGCCTCTTCGTGGACCCTCTCTTCCTCTACACGCTCTCCATAAGCGAGTCATGGATGTGCTTGTTTGTTGATGGGTGGTTAGCCATCACCGTCACCGTCCTCCGCTGCACCGCCGACGCCTTCCACCTTTGGAACATGTGGCTCCAGCTCAAGACTGCCACAAGATACTCCTTCGCCGGTGGAGCTGGCACCGCAGCCACGCCGGAGAATAGAGGCCTTAGAGATTCCACCCCACGCGCCGTCGCTCTCCGCTACTTCAAATCCAAAAAAGGCTTCTTCTTTGATCTCTTCGTTATTCTTCCACTTCCACAGGTGGTATTATGGGTAGTAATTCCAAGAATAATGAAAGAAGGATCAGTGACATTGGTGATGACAGTTTTGCTAATAGTATTTCTATTTCAATACTTACCCAAATTGTACCACTCGGTATGCCTGCTGCGGCGCCTCCAAAACCTGTCGGGGTTCATCTTTGGCACGGTCTGGTGGGGCATTGCCCTCAATCTCATTGCTTACTTTGTTGCTGCTCACGCTGCAGGCGCATGCTGGTACCTGTTGGGTGTGCAAAGAGCAGCCAAGTGCCTTAAAGAGCAATGCAGAGCCACGAGCAGCTGTGGGGTGAGGCTGTTGTCATGCAAAGATCGTATCTTTTATGGAGCCACCAAGATGGGAATGGGGAGAGACAGTGCAAGATTTGATTGGGCGAATAACAGGCAACCGAAATTCATGTGTTTGGATACTGCTGACAACTTTAATTATGGAGCTTATAAATGGACTGTTCAGCTTGTTGTCAACCAAAGTCGCTTGGAGAAGATCCTTTTTCCTATCTTTTGGGGTCTCATGACTCTTAGTACCTTTGGGAACTTGGAGAGCACCACGGAATGGCTGGAAGTTGTGTTCAATATCATTGTTCTCACCAGTGGACTCTTATTAGTCACCATGTTGATAGGAAATATCAAGGTGTTTTTGCATGCAACCACGTCAAAGAAACAAGGAATGCAACTAAAGATGAGGAATCTAGAGTTGTGGATGAGAAAGCGACATCTTCCACAAGGCTTCCGACAGCGTGTTCGGAACTACGAACGGCAACGTTGGGCAGCGATGCGCGGAGTTGACGAGTGCGAGATGATTAAAAACCTACCAGAAGGACTCCGGCGAGAGATAAAGTATCACCTTTGCTTGGATCTAGTTAGGCAGGTGCCATTGTTTCAACACATGGATGATCTTGTTCTTGAGAACATTTGTGACCGTGTCAAGTCCCTCATCTTCACCAAGGGCGAAACCATAACAAGAGAGGGCGACCCAGTTCAAAGAATGCTGTTTGTCGTTCGAGGGCATCTCCAAAGCAGCCAAGTCTTACGCGACGGCGTCAAAAGCTGCTGCATGTTGGGGCCAGGCAACTTTAGCGGCGACGAGCTTCTATCCTGGTGTCTCCGCCGCCCCTTCATAGAGCGCCTTCCGCCGTCCTCTTGCACTTTGGTGACATTGGAGACGACGGAGGCGTTTGGGTTGGAGGCGGAGGATGTCAAGTACGTAACCCAGCACTTTCGCTACACATTCGTCAACGACAAGGTCAAACGTAGCGCCCGCTACTACTCCCCTGGGTGGCGTACTTGGGCTGCCGTTGCCATCCAGCTTGCCTGGCGTCGTTACCGCCACCGGCTTACGTTAACGTCGTTGTCGTTTATTCGGCCTCGGCGACCCTTGTCGCGGTGCTCTTCCTTGGGGGAGGATCGCCTCCGCCTCTACACGGCGTTGCTTACTTCTCCCAAGCCCAATCAGGATCACTTCGATTTTTGAATCCATGTTGTGCATTTTTCTAATTATCTCGACTTCGAACTTGGAATTGATTGAATTTTCTGTTCTTTGGGTTGGTGGTACAAATTGAAATTATTGCCAGAGAATTTGTCAAGCTGGTTTATTATAATGGTTAGAATCGCAC

Coding sequence (CDS)

ATGGCCACCTCCGACGACGACGAAGTAGAAAAAGAATTACAAGAACACGATGGTGGCTTCTGCCGGAGCCTCTACGGAGTCGGCTCGGTTCTCGACCCGAGAGCCAAATGGGTCCGAGAATGGAACCGGGTCTTCCTCCTCGTCTCCGCCGCTGGCCTCTTCGTGGACCCTCTCTTCCTCTACACGCTCTCCATAAGCGAGTCATGGATGTGCTTGTTTGTTGATGGGTGGTTAGCCATCACCGTCACCGTCCTCCGCTGCACCGCCGACGCCTTCCACCTTTGGAACATGTGGCTCCAGCTCAAGACTGCCACAAGATACTCCTTCGCCGGTGGAGCTGGCACCGCAGCCACGCCGGAGAATAGAGGCCTTAGAGATTCCACCCCACGCGCCGTCGCTCTCCGCTACTTCAAATCCAAAAAAGGCTTCTTCTTTGATCTCTTCGTTATTCTTCCACTTCCACAGGTGGTATTATGGGTAGTAATTCCAAGAATAATGAAAGAAGGATCAGTGACATTGGTGATGACAGTTTTGCTAATAGTATTTCTATTTCAATACTTACCCAAATTGTACCACTCGGTATGCCTGCTGCGGCGCCTCCAAAACCTGTCGGGGTTCATCTTTGGCACGGTCTGGTGGGGCATTGCCCTCAATCTCATTGCTTACTTTGTTGCTGCTCACGCTGCAGGCGCATGCTGGTACCTGTTGGGTGTGCAAAGAGCAGCCAAGTGCCTTAAAGAGCAATGCAGAGCCACGAGCAGCTGTGGGGTGAGGCTGTTGTCATGCAAAGATCGTATCTTTTATGGAGCCACCAAGATGGGAATGGGGAGAGACAGTGCAAGATTTGATTGGGCGAATAACAGGCAACCGAAATTCATGTGTTTGGATACTGCTGACAACTTTAATTATGGAGCTTATAAATGGACTGTTCAGCTTGTTGTCAACCAAAGTCGCTTGGAGAAGATCCTTTTTCCTATCTTTTGGGGTCTCATGACTCTTAGTACCTTTGGGAACTTGGAGAGCACCACGGAATGGCTGGAAGTTGTGTTCAATATCATTGTTCTCACCAGTGGACTCTTATTAGTCACCATGTTGATAGGAAATATCAAGGTGTTTTTGCATGCAACCACGTCAAAGAAACAAGGAATGCAACTAAAGATGAGGAATCTAGAGTTGTGGATGAGAAAGCGACATCTTCCACAAGGCTTCCGACAGCGTGTTCGGAACTACGAACGGCAACGTTGGGCAGCGATGCGCGGAGTTGACGAGTGCGAGATGATTAAAAACCTACCAGAAGGACTCCGGCGAGAGATAAAGTATCACCTTTGCTTGGATCTAGTTAGGCAGGTGCCATTGTTTCAACACATGGATGATCTTGTTCTTGAGAACATTTGTGACCGTGTCAAGTCCCTCATCTTCACCAAGGGCGAAACCATAACAAGAGAGGGCGACCCAGTTCAAAGAATGCTGTTTGTCGTTCGAGGGCATCTCCAAAGCAGCCAAGTCTTACGCGACGGCGTCAAAAGCTGCTGCATGTTGGGGCCAGGCAACTTTAGCGGCGACGAGCTTCTATCCTGGTGTCTCCGCCGCCCCTTCATAGAGCGCCTTCCGCCGTCCTCTTGCACTTTGGTGACATTGGAGACGACGGAGGCGTTTGGGTTGGAGGCGGAGGATGTCAAGTACGTAACCCAGCACTTTCGCTACACATTCGTCAACGACAAGGTCAAACGTAGCGCCCGCTACTACTCCCCTGGGTGGCGTACTTGGGCTGCCGTTGCCATCCAGCTTGCCTGGCGTCGTTACCGCCACCGGCTTACGTTAACGTCGTTGTCGTTTATTCGGCCTCGGCGACCCTTGTCGCGGTGCTCTTCCTTGGGGGAGGATCGCCTCCGCCTCTACACGGCGTTGCTTACTTCTCCCAAGCCCAATCAGGATCACTTCGATTTTTGA

Protein sequence

MATSDDDEVEKELQEHDGGFCRSLYGVGSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLRCTADAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFDLFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGFIFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDRIFYGATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLKMRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQDHFDF

Homology

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BLAST of CmaCh16G008100 vs. ExPASy Swiss-Prot
Match: Q94AS9 (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana OX=3702 GN=CNGC4 PE=2 SV=2)

HSP 1 Score: 1007.7 bits (2604), Expect = 6.1e-293
Identity = 495/622 (79.58%), Postives = 546/622 (87.78%), Query Frame = 0


Query: 27  VGSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLR 86
           +G +LDPR+KWVREWN+VFLLV A GLFVDPLFLYTLS+S++ MCL VDGWLA+TVT LR
Sbjct: 76  LGRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDTCMCLLVDGWLALTVTALR 135

Query: 87  CTADAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFD 146
              D  HLWN+W+Q K A R+ + GG     T +  G R ST   VA  Y K K GFFFD
Sbjct: 136 SMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGST--RVAPPYVK-KNGFFFD 195

Query: 147 LFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGF 206
           LFVILPLPQVVLWVVIP ++K GSVTLV++VLL+ FLFQYLPK+YHS+  LRR   LSG+
Sbjct: 196 LFVILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGY 255

Query: 207 IFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDRI 266
           IFGTVWWGIALN+IAYFVAAHAAGACWYLLGVQR+AKCLKEQC  T  C +R+LSCK+ +
Sbjct: 256 IFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPV 315

Query: 267 FYGATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRLEKILFPI 326
           +YG T M +  D AR  WA N Q + +CLD   N+ YGAY+WT+QLV ++SRLEKILFPI
Sbjct: 316 YYGTTVMVL--DRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSESRLEKILFPI 375

Query: 327 FWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLK 386
           FWGLMTLSTFGNLESTTEW EVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQ M LK
Sbjct: 376 FWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMHLK 435

Query: 387 MRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDL 446
           MRN+E WM+KRHLP GFRQRVRNYERQRWAAMRGVDECEM++NLPEGLRR+IKYHLCLDL
Sbjct: 436 MRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDL 495

Query: 447 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDG 506
           VRQVPLFQHMDDLVLENICDRVKSLIFTKGETI +EGD VQRMLFVVRGHLQSSQ+LRDG
Sbjct: 496 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDG 555

Query: 507 VKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHF 566
           VKSCCMLGPGNFSGDELLSWCLRRPF+ERLPPSS TLVTLETTEAFGL+AEDVKYVTQHF
Sbjct: 556 VKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHF 615

Query: 567 RYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLG 626
           RYTFVN+KVKRSARYYSPGWRTWAAVA+QLAWRRY+HRLTLTSLSFIRPRRPLSRC+SLG
Sbjct: 616 RYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRCASLG 675

Query: 627 EDRLRLYTALLTSPKPNQDHFD 649
           ED+LRLY A+LTSPKPN D FD
Sbjct: 676 EDKLRLYAAILTSPKPNPDDFD 692

[Close]

BLAST of CmaCh16G008100 vs. ExPASy Swiss-Prot
Match: O65718 (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana OX=3702 GN=CNGC2 PE=1 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 3.3e-182
Identity = 327/632 (51.74%), Postives = 435/632 (68.83%), Query Frame = 0


Query: 28  GSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESW--MCLFVDGWLAITVTVL 87
           G VLDPR+K V+ WNR  LL     L VDPLF Y LSI  +    CL++DG  A  VTVL
Sbjct: 111 GEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAAVVTVL 170

Query: 88  RCTADAFHLWNMWLQLKTA--TRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGF 147
           R   DA HLW++WLQ + A  +R S   G G              PRA+A  Y +S  GF
Sbjct: 171 RTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVW---------DPRAIASHYARSLTGF 230

Query: 148 FFDLFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNL 207
           +FD+ VILP+PQ V W+V+P++++E  V L+MT+LL++FLFQ+LPK+YH +CL+RR+Q +
Sbjct: 231 WFDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKV 290

Query: 208 SGFIFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCK 267
           +G+IFGT+WWG ALNLIAYF+A+H AG CWY+L +QR A C+++QC  T +C +  L+CK
Sbjct: 291 TGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTGNCNLS-LACK 350

Query: 268 DRIFY----GATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRL 327
           + + Y      + +G    S       N   K MCLD+   F YG Y+W + ++ + S  
Sbjct: 351 EEVCYQFVSPTSTVGYPCLSGNLTSVVN---KPMCLDSNGPFRYGIYRWALPVISSNSLA 410

Query: 328 EKILFPIFWGLMTLSTFGN-LESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTS 387
            KIL+PIFWGLMTLSTF N LE T+ WLEV+F+I+++ SGLLL T+LIGNI+VFLHA  +
Sbjct: 411 VKILYPIFWGLMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIGNIQVFLHAVMA 470

Query: 388 KKQGMQLKMRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREI 447
           KK+ MQ++ R++E WM++R LP   RQRVR +ERQRW A+ G DE E+I +LP GLRR+I
Sbjct: 471 KKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWNALGGEDELELIHDLPPGLRRDI 530

Query: 448 KYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQ 507
           K +LC DL+ +VPLF+ MDDL+L+NICDR K  +F+K E I REGDPVQRM+F++RG ++
Sbjct: 531 KRYLCFDLINKVPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRVK 590

Query: 508 SSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAED 567
             Q L  GV +   L PG + GDELLSWCLRRPF++RLPPSS T V LE  EAF L +ED
Sbjct: 591 RIQSLSKGVLATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIEAFSLGSED 650

Query: 568 VKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRP 627
           ++Y+T HFRY F N+++KR+ARYYS  WRTWAAV IQ+AWRR R R    ++       P
Sbjct: 651 LRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRGENIG--GSMSP 710

Query: 628 LSRCSSLG--EDRLRLYTALLTSPKPNQDHFD 649
           +S  S  G  E RL  Y A+  S +P+ DH +
Sbjct: 711 VSENSIEGNSERRLLQYAAMFMSIRPH-DHLE 726

[Close]

BLAST of CmaCh16G008100 vs. ExPASy Swiss-Prot
Match: Q9SL29 (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana OX=3702 GN=CNGC15 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.3e-103
Identity = 216/586 (36.86%), Postives = 336/586 (57.34%), Query Frame = 0


Query: 30  VLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLRCTA 89
           +LDPR + +R WN++FL+     LFVDPLF + L +  +  C+ +   L + +T++R  A
Sbjct: 68  ILDPRGQTIRRWNKIFLIACLVSLFVDPLFFF-LPVMRNEACITIGVRLEVVLTLIRSLA 127

Query: 90  DAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFDLFV 149
           DAF++  + ++ +TA            +    RG      R +A RY    K F+  L  
Sbjct: 128 DAFYIAQILIRFRTAY-------IAPPSRVFGRGELVIDSRKIAWRYL--HKSFWIHLVA 187

Query: 150 ILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGFIFG 209
            LPLPQV++W++IP  ++   +T    VL  + +FQY+P+++    L R++   +G +  
Sbjct: 188 ALPLPQVLIWIIIPN-LRGSPMTNTKNVLRFIIIFQYVPRMFLIFPLSRQIIKATGVVTE 247

Query: 210 TVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSS-CGVRLLSCKDRIFY 269
           T W G A NL+ Y +A+H  GACWYLL V+R   C +  C      C  R   C+     
Sbjct: 248 TAWAGAAYNLMLYMLASHVLGACWYLLAVERQEACWRHACNIEKQICQYRFFECR----- 307

Query: 270 GATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSR-LEKILFPIF 329
              ++   + ++ F+W+N      +C   +  + +G +   V   V  S+ + K  + ++
Sbjct: 308 ---RLEDPQRNSWFEWSNITT---ICKPASKFYEFGIFGDAVTSTVTSSKFINKYFYCLW 367

Query: 330 WGLMTLSTFG-NLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLK 389
           WGL  LS+ G NL ++T   E++F II+ T GL+L  +LIGN++ +L +TT + +  +++
Sbjct: 368 WGLKNLSSLGQNLATSTYAGEILFAIIIATLGLVLFALLIGNMQTYLQSTTMRLEEWRIR 427

Query: 390 MRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDL 449
             + E WM  R LP   RQ VR Y++ +W A RGVDE  ++ +LP  LRR+IK HLC DL
Sbjct: 428 RTDTEQWMHHRQLPPELRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDL 487

Query: 450 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQS--SQVLR 509
           VR+VPLF  MD+ +L+ IC+R+K  + T+G  + REGDPV  MLF++RGHL S  +   R
Sbjct: 488 VRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGR 547

Query: 510 DGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQ 569
            G  + C++GPG+F G+ELL+W L    +  LP S+ T+  +   EAF L+AED+++V  
Sbjct: 548 TGFFNSCLIGPGDFCGEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAEDLQFVAS 607

Query: 570 HFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSL 611
            FR      +++   R+YS  WRTWAA  IQ AWRR+R R   T L
Sbjct: 608 QFRRLHTK-QLRHKFRFYSHQWRTWAACFIQAAWRRHRKRKYKTEL 630

[Close]

BLAST of CmaCh16G008100 vs. ExPASy Swiss-Prot
Match: Q9SJA4 (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana OX=3702 GN=CNGC14 PE=2 SV=2)

HSP 1 Score: 369.0 bits (946), Expect = 1.1e-100
Identity = 236/592 (39.86%), Postives = 336/592 (56.76%), Query Frame = 0


Query: 30  VLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISE--SWMCLFVDGWLAITVTVLRC 89
           +LDP    V +WNRVFL      L+VDPLF +  S+       C+  D  L I +T  R 
Sbjct: 72  ILDPGGDAVLQWNRVFLFWCLVALYVDPLFFFLSSVKRIGRSSCMTTDLKLGIVITFFRT 131

Query: 90  TADAFHLWNMWLQLKTA--TRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFF 149
            AD F++ ++ ++ +TA  +R S   G         RG     P+ +A RY +S   F  
Sbjct: 132 LADLFYVLHIVIKFRTAYVSRTSRVFG---------RGELVKDPKLIARRYLRS--DFIV 191

Query: 150 DLFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSG 209
           DL   LPLPQ+V W ++P I    S      ++LIV L QY+P+LY    L   +   +G
Sbjct: 192 DLIACLPLPQIVSWFILPSIRSSHSDHTTNALVLIV-LVQYIPRLYLIFPLSAEIIKATG 251

Query: 210 FIFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDR 269
            +  T W G A NL+ Y +A+H  G+ WYLL ++R A C K +C   S      L C   
Sbjct: 252 VVTTTAWAGAAYNLLQYMLASHILGSAWYLLSIERQATCWKAECHKESV----PLQCVTD 311

Query: 270 IFYGATKMGMGRDSARFDWANNRQPKFMCLDTADN--FNYGAYKWTV-QLVVNQSRLEKI 329
            F   T   + RD  R +W N       C D ++N  F +G +   + + VV+   LEK 
Sbjct: 312 FFDCGT---LHRDD-RNNWQNTTVVFSNC-DPSNNIQFTFGIFADALTKNVVSSPFLEKY 371

Query: 330 LFPIFWGLMTLSTFG-NLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQ 389
           L+ +++GL  LS++G NL ++T  LE +F I+V   GL+L  +LIGN++ +L + T + +
Sbjct: 372 LYCLWFGLQNLSSYGQNLSTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSITVRLE 431

Query: 390 GMQLKMRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYH 449
             +LK R+ E WM  R LPQ  R+RVR + + +W A RGVDE  ++ +LP  LRR+I+ H
Sbjct: 432 EWRLKRRDTEEWMGHRLLPQNLRERVRRFVQYKWLATRGVDEETILHSLPADLRRDIQRH 491

Query: 450 LCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQ 509
           LCLDLVR+VPLF  MDD +L+ IC+R+ S + T+G  I REGDPV  MLF++RG L+SS 
Sbjct: 492 LCLDLVRRVPLFAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLFIIRGKLESST 551

Query: 510 VL--RDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDV 569
               R G  +   L PG+F G+ELL+W L       LP S+ T+  LE  EAF L+A D+
Sbjct: 552 TNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTVNLPSSTRTVRALEEVEAFALQAGDL 611

Query: 570 KYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLS 612
           K+V   FR    + K++ + RYYS  WRTWAA  +Q+AWRRY+ +    SLS
Sbjct: 612 KFVANQFR-RLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAKSLS 641

[Close]

BLAST of CmaCh16G008100 vs. ExPASy Swiss-Prot
Match: A0A072VMJ3 (Protein CNGC15c OS=Medicago truncatula OX=3880 GN=CNGC15C PE=1 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.4e-100
Identity = 218/580 (37.59%), Postives = 326/580 (56.21%), Query Frame = 0


Query: 30  VLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLRCTA 89
           VLDPR + +  WN++FL+     LFVDPLF Y L +    +C+ +   L + +TV+R   
Sbjct: 77  VLDPRGQLIHRWNKIFLVACLVSLFVDPLFFY-LPVVREEVCIDIGKTLEVILTVVRSFG 136

Query: 90  DAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFDLFV 149
           D F++  + ++ +TA           ++    RG    T   +ALRYF   KGF+ D   
Sbjct: 137 DLFYIVQICMKFRTAY-------VAPSSKVFGRGELVLTYSKIALRYF--SKGFWLDFIA 196

Query: 150 ILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGFIFG 209
            LPLPQV++W++IP  ++  ++     VL    +FQY+P+LY    L  ++   +G +  
Sbjct: 197 ALPLPQVLIWIIIP-TLRGSTMANTKNVLRFFIIFQYIPRLYLIFPLSSQIVKATGVVTE 256

Query: 210 TVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDRIFYG 269
           T W G A NL+ Y +A+H  GACWYLL ++R   C K  C    S      +C+    YG
Sbjct: 257 TAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWKSVCNMEKS------NCQ----YG 316

Query: 270 ATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSR-LEKILFPIFW 329
                  +D+ R  W        +C   A  + +G Y   +   V  S    K  + ++W
Sbjct: 317 FFNCHSIKDAPRVAWFIASNVTNLCSPNAGFYPFGIYADAMTSKVTSSPFFNKYFYCLWW 376

Query: 330 GLMTLSTFGNLESTTEWL-EVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLKM 389
           GL  LS+ G    T+ ++ E++  I+V T GL+L  +LIGN++ +L + T + +  ++K 
Sbjct: 377 GLRNLSSLGQGLLTSTFIGEIMVAIVVATLGLVLFALLIGNMQTYLQSITVRLEEWRVKR 436

Query: 390 RNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDLV 449
            + E WM  R LP   R+ +R Y + +W A RGV+E +++K LP  LRREIK HLCL+LV
Sbjct: 437 TDTEQWMHHRQLPPELRESIRKYNQYKWVATRGVEEEDLLKGLPLDLRREIKRHLCLELV 496

Query: 450 RQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQS--SQVLRD 509
           R VPLF  MD+ +L+ IC+R+K  + T+G  + REGDPV  MLF++RGHL S  +   RD
Sbjct: 497 RGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRD 556

Query: 510 GVKSCCMLGPGNFSGDELLSWCL-RRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQ 569
           G  + C +GPG+F G+ELL+W L  RP +  LP S+ T+      EAF L AED+K+V  
Sbjct: 557 GFFNSCRIGPGDFCGEELLTWALDPRPSV-ILPSSTRTVKAFSEVEAFALIAEDLKFVAS 616

Query: 570 HFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHR 605
            FR    + +++   R+YS  WRTWAA  IQ AWRR++ R
Sbjct: 617 QFR-RLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKR 633

[Close]

BLAST of CmaCh16G008100 vs. TAIR 10
Match: AT5G54250.1 (cyclic nucleotide-gated cation channel 4 )

HSP 1 Score: 1007.7 bits (2604), Expect = 4.3e-294
Identity = 495/622 (79.58%), Postives = 546/622 (87.78%), Query Frame = 0


Query: 27  VGSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLR 86
           +G +LDPR+KWVREWN+VFLLV A GLFVDPLFLYTLS+S++ MCL VDGWLA+TVT LR
Sbjct: 76  LGRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDTCMCLLVDGWLALTVTALR 135

Query: 87  CTADAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFD 146
              D  HLWN+W+Q K A R+ + GG     T +  G R ST   VA  Y K K GFFFD
Sbjct: 136 SMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGST--RVAPPYVK-KNGFFFD 195

Query: 147 LFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGF 206
           LFVILPLPQVVLWVVIP ++K GSVTLV++VLL+ FLFQYLPK+YHS+  LRR   LSG+
Sbjct: 196 LFVILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGY 255

Query: 207 IFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDRI 266
           IFGTVWWGIALN+IAYFVAAHAAGACWYLLGVQR+AKCLKEQC  T  C +R+LSCK+ +
Sbjct: 256 IFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPV 315

Query: 267 FYGATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRLEKILFPI 326
           +YG T M +  D AR  WA N Q + +CLD   N+ YGAY+WT+QLV ++SRLEKILFPI
Sbjct: 316 YYGTTVMVL--DRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSESRLEKILFPI 375

Query: 327 FWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLK 386
           FWGLMTLSTFGNLESTTEW EVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQ M LK
Sbjct: 376 FWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMHLK 435

Query: 387 MRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDL 446
           MRN+E WM+KRHLP GFRQRVRNYERQRWAAMRGVDECEM++NLPEGLRR+IKYHLCLDL
Sbjct: 436 MRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDL 495

Query: 447 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDG 506
           VRQVPLFQHMDDLVLENICDRVKSLIFTKGETI +EGD VQRMLFVVRGHLQSSQ+LRDG
Sbjct: 496 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDG 555

Query: 507 VKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHF 566
           VKSCCMLGPGNFSGDELLSWCLRRPF+ERLPPSS TLVTLETTEAFGL+AEDVKYVTQHF
Sbjct: 556 VKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHF 615

Query: 567 RYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLG 626
           RYTFVN+KVKRSARYYSPGWRTWAAVA+QLAWRRY+HRLTLTSLSFIRPRRPLSRC+SLG
Sbjct: 616 RYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRCASLG 675

Query: 627 EDRLRLYTALLTSPKPNQDHFD 649
           ED+LRLY A+LTSPKPN D FD
Sbjct: 676 EDKLRLYAAILTSPKPNPDDFD 692

[Close]

BLAST of CmaCh16G008100 vs. TAIR 10
Match: AT5G54250.2 (cyclic nucleotide-gated cation channel 4 )

HSP 1 Score: 1007.7 bits (2604), Expect = 4.3e-294
Identity = 495/622 (79.58%), Postives = 546/622 (87.78%), Query Frame = 0


Query: 27  VGSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLR 86
           +G +LDPR+KWVREWN+VFLLV A GLFVDPLFLYTLS+S++ MCL VDGWLA+TVT LR
Sbjct: 76  LGRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDTCMCLLVDGWLALTVTALR 135

Query: 87  CTADAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFD 146
              D  HLWN+W+Q K A R+ + GG     T +  G R ST   VA  Y K K GFFFD
Sbjct: 136 SMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGST--RVAPPYVK-KNGFFFD 195

Query: 147 LFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGF 206
           LFVILPLPQVVLWVVIP ++K GSVTLV++VLL+ FLFQYLPK+YHS+  LRR   LSG+
Sbjct: 196 LFVILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGY 255

Query: 207 IFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDRI 266
           IFGTVWWGIALN+IAYFVAAHAAGACWYLLGVQR+AKCLKEQC  T  C +R+LSCK+ +
Sbjct: 256 IFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPV 315

Query: 267 FYGATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRLEKILFPI 326
           +YG T M +  D AR  WA N Q + +CLD   N+ YGAY+WT+QLV ++SRLEKILFPI
Sbjct: 316 YYGTTVMVL--DRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSESRLEKILFPI 375

Query: 327 FWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLK 386
           FWGLMTLSTFGNLESTTEW EVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQ M LK
Sbjct: 376 FWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMHLK 435

Query: 387 MRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDL 446
           MRN+E WM+KRHLP GFRQRVRNYERQRWAAMRGVDECEM++NLPEGLRR+IKYHLCLDL
Sbjct: 436 MRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDL 495

Query: 447 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDG 506
           VRQVPLFQHMDDLVLENICDRVKSLIFTKGETI +EGD VQRMLFVVRGHLQSSQ+LRDG
Sbjct: 496 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDG 555

Query: 507 VKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHF 566
           VKSCCMLGPGNFSGDELLSWCLRRPF+ERLPPSS TLVTLETTEAFGL+AEDVKYVTQHF
Sbjct: 556 VKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHF 615

Query: 567 RYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLG 626
           RYTFVN+KVKRSARYYSPGWRTWAAVA+QLAWRRY+HRLTLTSLSFIRPRRPLSRC+SLG
Sbjct: 616 RYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRCASLG 675

Query: 627 EDRLRLYTALLTSPKPNQDHFD 649
           ED+LRLY A+LTSPKPN D FD
Sbjct: 676 EDKLRLYAAILTSPKPNPDDFD 692

[Close]

BLAST of CmaCh16G008100 vs. TAIR 10
Match: AT5G54250.3 (cyclic nucleotide-gated cation channel 4 )

HSP 1 Score: 991.9 bits (2563), Expect = 2.4e-289
Identity = 490/622 (78.78%), Postives = 541/622 (86.98%), Query Frame = 0


Query: 27  VGSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLR 86
           +G +LDPR+KWVREWN+VFLLV A GLFVDPLFLYTLS+S++ MCL VDGWLA+TVT LR
Sbjct: 76  LGRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDTCMCLLVDGWLALTVTALR 135

Query: 87  CTADAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFD 146
              D  HLWN+W+Q K A R+ + GG     T +  G R ST   VA  Y K K GFFFD
Sbjct: 136 SMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGST--RVAPPYVK-KNGFFFD 195

Query: 147 LFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGF 206
           LFVILPLPQVVLWVVIP ++K GSVTLV++VLL+ FLFQYLPK+YHS+  LRR   LSG+
Sbjct: 196 LFVILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGY 255

Query: 207 IFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDRI 266
           IFGTVWWGIALN+IAYFVAAHAAGACWYLLGVQR+AKCLKEQC  T  C +R+LSCK+ +
Sbjct: 256 IFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPV 315

Query: 267 FYGATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRLEKILFPI 326
           +YG T M +  D AR  WA N Q + +CLD   N+ YGAY+WT+QLV ++SRLEKILFPI
Sbjct: 316 YYGTTVMVL--DRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSESRLEKILFPI 375

Query: 327 FWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLK 386
           FWGLMTLSTFGNLESTTEW EVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQ M LK
Sbjct: 376 FWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMHLK 435

Query: 387 MRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDL 446
           MRN+E WM+KRHLP GFRQRVRNYERQRWAAMRGVDECEM++NLPEGLRR+IKYHLCLDL
Sbjct: 436 MRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDL 495

Query: 447 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDG 506
           VR     QHMDDLVLENICDRVKSLIFTKGETI +EGD VQRMLFVVRGHLQSSQ+LRDG
Sbjct: 496 VR-----QHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDG 555

Query: 507 VKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHF 566
           VKSCCMLGPGNFSGDELLSWCLRRPF+ERLPPSS TLVTLETTEAFGL+AEDVKYVTQHF
Sbjct: 556 VKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHF 615

Query: 567 RYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLG 626
           RYTFVN+KVKRSARYYSPGWRTWAAVA+QLAWRRY+HRLTLTSLSFIRPRRPLSRC+SLG
Sbjct: 616 RYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRCASLG 675

Query: 627 EDRLRLYTALLTSPKPNQDHFD 649
           ED+LRLY A+LTSPKPN D FD
Sbjct: 676 EDKLRLYAAILTSPKPNPDDFD 687

[Close]

BLAST of CmaCh16G008100 vs. TAIR 10
Match: AT5G15410.2 (Cyclic nucleotide-regulated ion channel family protein )

HSP 1 Score: 639.8 bits (1649), Expect = 2.4e-183
Identity = 327/632 (51.74%), Postives = 435/632 (68.83%), Query Frame = 0


Query: 28  GSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESW--MCLFVDGWLAITVTVL 87
           G VLDPR+K V+ WNR  LL     L VDPLF Y LSI  +    CL++DG  A  VTVL
Sbjct: 110 GEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAAVVTVL 169

Query: 88  RCTADAFHLWNMWLQLKTA--TRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGF 147
           R   DA HLW++WLQ + A  +R S   G G              PRA+A  Y +S  GF
Sbjct: 170 RTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVW---------DPRAIASHYARSLTGF 229

Query: 148 FFDLFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNL 207
           +FD+ VILP+PQ V W+V+P++++E  V L+MT+LL++FLFQ+LPK+YH +CL+RR+Q +
Sbjct: 230 WFDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKV 289

Query: 208 SGFIFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCK 267
           +G+IFGT+WWG ALNLIAYF+A+H AG CWY+L +QR A C+++QC  T +C +  L+CK
Sbjct: 290 TGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTGNCNLS-LACK 349

Query: 268 DRIFY----GATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRL 327
           + + Y      + +G    S       N   K MCLD+   F YG Y+W + ++ + S  
Sbjct: 350 EEVCYQFVSPTSTVGYPCLSGNLTSVVN---KPMCLDSNGPFRYGIYRWALPVISSNSLA 409

Query: 328 EKILFPIFWGLMTLSTFGN-LESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTS 387
            KIL+PIFWGLMTLSTF N LE T+ WLEV+F+I+++ SGLLL T+LIGNI+VFLHA  +
Sbjct: 410 VKILYPIFWGLMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIGNIQVFLHAVMA 469

Query: 388 KKQGMQLKMRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREI 447
           KK+ MQ++ R++E WM++R LP   RQRVR +ERQRW A+ G DE E+I +LP GLRR+I
Sbjct: 470 KKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWNALGGEDELELIHDLPPGLRRDI 529

Query: 448 KYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQ 507
           K +LC DL+ +VPLF+ MDDL+L+NICDR K  +F+K E I REGDPVQRM+F++RG ++
Sbjct: 530 KRYLCFDLINKVPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRVK 589

Query: 508 SSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAED 567
             Q L  GV +   L PG + GDELLSWCLRRPF++RLPPSS T V LE  EAF L +ED
Sbjct: 590 RIQSLSKGVLATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIEAFSLGSED 649

Query: 568 VKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRP 627
           ++Y+T HFRY F N+++KR+ARYYS  WRTWAAV IQ+AWRR R R    ++       P
Sbjct: 650 LRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRGENIG--GSMSP 709

Query: 628 LSRCSSLG--EDRLRLYTALLTSPKPNQDHFD 649
           +S  S  G  E RL  Y A+  S +P+ DH +
Sbjct: 710 VSENSIEGNSERRLLQYAAMFMSIRPH-DHLE 725

[Close]

BLAST of CmaCh16G008100 vs. TAIR 10
Match: AT5G15410.1 (Cyclic nucleotide-regulated ion channel family protein )

HSP 1 Score: 639.8 bits (1649), Expect = 2.4e-183
Identity = 327/632 (51.74%), Postives = 435/632 (68.83%), Query Frame = 0


Query: 28  GSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESW--MCLFVDGWLAITVTVL 87
           G VLDPR+K V+ WNR  LL     L VDPLF Y LSI  +    CL++DG  A  VTVL
Sbjct: 111 GEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAAVVTVL 170

Query: 88  RCTADAFHLWNMWLQLKTA--TRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGF 147
           R   DA HLW++WLQ + A  +R S   G G              PRA+A  Y +S  GF
Sbjct: 171 RTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVW---------DPRAIASHYARSLTGF 230

Query: 148 FFDLFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNL 207
           +FD+ VILP+PQ V W+V+P++++E  V L+MT+LL++FLFQ+LPK+YH +CL+RR+Q +
Sbjct: 231 WFDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKV 290

Query: 208 SGFIFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCK 267
           +G+IFGT+WWG ALNLIAYF+A+H AG CWY+L +QR A C+++QC  T +C +  L+CK
Sbjct: 291 TGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTGNCNLS-LACK 350

Query: 268 DRIFY----GATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRL 327
           + + Y      + +G    S       N   K MCLD+   F YG Y+W + ++ + S  
Sbjct: 351 EEVCYQFVSPTSTVGYPCLSGNLTSVVN---KPMCLDSNGPFRYGIYRWALPVISSNSLA 410

Query: 328 EKILFPIFWGLMTLSTFGN-LESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTS 387
            KIL+PIFWGLMTLSTF N LE T+ WLEV+F+I+++ SGLLL T+LIGNI+VFLHA  +
Sbjct: 411 VKILYPIFWGLMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIGNIQVFLHAVMA 470

Query: 388 KKQGMQLKMRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREI 447
           KK+ MQ++ R++E WM++R LP   RQRVR +ERQRW A+ G DE E+I +LP GLRR+I
Sbjct: 471 KKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWNALGGEDELELIHDLPPGLRRDI 530

Query: 448 KYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQ 507
           K +LC DL+ +VPLF+ MDDL+L+NICDR K  +F+K E I REGDPVQRM+F++RG ++
Sbjct: 531 KRYLCFDLINKVPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRVK 590

Query: 508 SSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAED 567
             Q L  GV +   L PG + GDELLSWCLRRPF++RLPPSS T V LE  EAF L +ED
Sbjct: 591 RIQSLSKGVLATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIEAFSLGSED 650

Query: 568 VKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRP 627
           ++Y+T HFRY F N+++KR+ARYYS  WRTWAAV IQ+AWRR R R    ++       P
Sbjct: 651 LRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRGENIG--GSMSP 710

Query: 628 LSRCSSLG--EDRLRLYTALLTSPKPNQDHFD 649
           +S  S  G  E RL  Y A+  S +P+ DH +
Sbjct: 711 VSENSIEGNSERRLLQYAAMFMSIRPH-DHLE 726

The following BLAST results are available for this feature:

BLAST of CmaCh16G008100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AS9	6.1e-293	79.58	Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana OX=3702 GN=CNGC4 P...	[more]
O65718	3.3e-182	51.74	Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana OX=3702 GN=CNGC2 P...	[more]
Q9SL29	5.3e-103	36.86	Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SJA4	1.1e-100	39.86	Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana OX=3702 ...	[more]
A0A072VMJ3	1.4e-100	37.59	Protein CNGC15c OS=Medicago truncatula OX=3880 GN=CNGC15C PE=1 SV=1	[more]

BLAST of CmaCh16G008100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54250.1	4.3e-294	79.58	cyclic nucleotide-gated cation channel 4	[more]
AT5G54250.2	4.3e-294	79.58	cyclic nucleotide-gated cation channel 4	[more]
AT5G54250.3	2.4e-289	78.78	cyclic nucleotide-gated cation channel 4	[more]
AT5G15410.2	2.4e-183	51.74	Cyclic nucleotide-regulated ion channel family protein	[more]
AT5G15410.1	2.4e-183	51.74	Cyclic nucleotide-regulated ion channel family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000595	Cyclic nucleotide-binding domain	PFAM	PF00027	cNMP_binding	coord: 473..560 e-value: 2.1E-7 score: 30.9
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 452..531 score: 11.6696
IPR000595	Cyclic nucleotide-binding domain	CDD	cd00038	CAP_ED	coord: 452..558 e-value: 1.9071E-15 score: 70.8178
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 450..568 e-value: 9.1E-28 score: 98.5
IPR005821	Ion transport domain	PFAM	PF00520	Ion_trans	coord: 41..369 e-value: 3.5E-10 score: 39.5
None	No IPR available	GENE3D	1.10.287.630	Helix hairpin bin	coord: 377..443 e-value: 2.9E-16 score: 61.6
None	No IPR available	PANTHER	PTHR45651	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	coord: 23..646
None	No IPR available	PANTHER	PTHR45651:SF14	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 4	coord: 23..646
None	No IPR available	SUPERFAMILY	81324	Voltage-gated potassium channels	coord: 33..373
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 378..566

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G008100.1	CmaCh16G008100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098655	cation transmembrane transport
biological_process	GO:0009626	plant-type hypersensitive response
biological_process	GO:0006811	ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008324	cation transmembrane transporter activity
molecular_function	GO:0005216	ion channel activity