CmaCh14G011420 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G011420
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr14: 8930913 .. 8932220 (+)
RNA-Seq Expression	CmaCh14G011420
Synteny	CmaCh14G011420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGGATCTCACTCTTTTCCCCTCCTTCCATCAAACAACCCAAACTGACCCAAGATGAAGAACATCACCACCATCTTCTTCACCTTACCCATCTTCCTTCTCTCTCTCTCCCATGCTCTCCAAGGTATTACACAACTTACTTTCTTTATTCTTTCCTTAAAATCCACTTTTTTTCTCAAATCTCCCGCTTTGTAGATCACATTGATGCACCATTGCTGACTATTGGAGCTCAATTTTCTGAATCGTCCCTTCAAAAGGTGATTAATTAACCTCTCTTTCACTAATTTTACAATTTGGAAAACAAATACTCTAATTATTTTATTTCTTTTATTTTTAGCAGGAAACCCTTGTGGGATTTGATGCCATGAACATGAGGAAAATGGGGAGTGGAAGAATGAGAGTGGCAGTAAAGAGGATAATGAGGAGAGAGAGTACTGCAAATGATGAGAGAGAAGAAGAAGATCAAGAAAGCTCAGGAATTTCAGGTGTCAAAAATTGTAACTTGGAAGATGAAAAGGGTGATTTTGGAGATGGTAGTGTAAAAAATTGTAAGAATGGTGGTAGGAAGCTCAATGTTGCTGGCTTTGTAACATTTGGTGCAGATTACAAAGGGCCTCTACACCACCCTCCTAAACATAATTAATCACACCCCTTTTTATAGGATCTTTTTTTGGTTTTGTGTTAGCTACTTAAATGGGTCCAAATATATATACATATAATATTTTGTAATATCATCAAACAACAAAAAGAGTACTCAAAATCAATGGCTTGTAAGTATTTAGCAATTCATATGGTTTCATGCAGGACAAAAGACAAAGAGTTCGAACAAGTTTCATCAAACCTCTCAACTTAACCATCAGGTCTCTCTCTTTCCCTCTCTCAATTTTGTTTTCCCACTTCAATTCTAAGCTCACATTTGTTGTGCAGGACACTCGTGAGGCAAAAAGATGGAAGAATTCAAGCATCTCCAAGAGGGTATCCACGAGGGAGGAAGAAACTCAAAGGCTTGTGAAGGCAGCCAGAGAGATAGCCAATTTGATGCACAAAGATTATAAGGATTGGGGTCACCGCAAGCCACCAATCAACAATCGTGAACCATTGCATTAAGTGTTTGAAATGGCTTAGCTTAGATTTATAGAAAATTTAGGCCTCAATTTGCATACCCTTTCTTTAGCGTAGCTACAATATGATATAGACATGTATAAGTACAAGAAGTTATCCTCCAAGTACCTTTTTTTTTTTTCCTTCTTCTAGTTAGTTATATATTATATTACATAGAATGCGACACAAGGAACTACAAGAACAAGC

mRNA sequence

CATGGATCTCACTCTTTTCCCCTCCTTCCATCAAACAACCCAAACTGACCCAAGATGAAGAACATCACCACCATCTTCTTCACCTTACCCATCTTCCTTCTCTCTCTCTCCCATGCTCTCCAAGATCACATTGATGCACCATTGCTGACTATTGGAGCTCAATTTTCTGAATCGTCCCTTCAAAAGCAGGAAACCCTTGTGGGATTTGATGCCATGAACATGAGGAAAATGGGGAGTGGAAGAATGAGAGTGGCAGTAAAGAGGATAATGAGGAGAGAGAGTACTGCAAATGATGAGAGAGAAGAAGAAGATCAAGAAAGCTCAGGAATTTCAGGTGTCAAAAATTGTAACTTGGAAGATGAAAAGGGTGATTTTGGAGATGGTAGTGTAAAAAATTGACAAAAGACAAAGAGTTCGAACAAGTTTCATCAAACCTCTCAACTTAACCATCAGGACACTCGTGAGGCAAAAAGATGGAAGAATTCAAGCATCTCCAAGAGGGTATCCACGAGGGAGGAAGAAACTCAAAGGCTTGTGAAGGCAGCCAGAGAGATAGCCAATTTGATGCACAAAGATTATAAGGATTGGGGTCACCGCAAGCCACCAATCAACAATCGTGAACCATTGCATTAAGTGTTTGAAATGGCTTAGCTTAGATTTATAGAAAATTTAGGCCTCAATTTGCATACCCTTTCTTTAGCGTAGCTACAATATGATATAGACATGTATAAGTACAAGAAGTTATCCTCCAAGTACCTTTTTTTTTTTTCCTTCTTCTAGTTAGTTATATATTATATTACATAGAATGCGACACAAGGAACTACAAGAACAAGC

Coding sequence (CDS)

ATGAAGAACATCACCACCATCTTCTTCACCTTACCCATCTTCCTTCTCTCTCTCTCCCATGCTCTCCAAGATCACATTGATGCACCATTGCTGACTATTGGAGCTCAATTTTCTGAATCGTCCCTTCAAAAGCAGGAAACCCTTGTGGGATTTGATGCCATGAACATGAGGAAAATGGGGAGTGGAAGAATGAGAGTGGCAGTAAAGAGGATAATGAGGAGAGAGAGTACTGCAAATGATGAGAGAGAAGAAGAAGATCAAGAAAGCTCAGGAATTTCAGGTGTCAAAAATTGTAACTTGGAAGATGAAAAGGGTGATTTTGGAGATGGTAGTGTAAAAAATTGA

Protein sequence

MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMGSGRMRVAVKRIMRRESTANDEREEEDQESSGISGVKNCNLEDEKGDFGDGSVKN

Homology

[Close]

BLAST of CmaCh14G011420 vs. ExPASy TrEMBL
Match: A0A6J1IUE5 (uncharacterized protein LOC111480014 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480014 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.2e-41
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMG 60
          MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMG
Sbjct: 1  MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMG 60

Query: 61 SGRMRVAVKRIMRRESTANDEREEEDQESSGISGVK 97
          SGRMRVAVKRIMRRESTANDEREEEDQESSGISG K
Sbjct: 61 SGRMRVAVKRIMRRESTANDEREEEDQESSGISGQK 96

[Close]

BLAST of CmaCh14G011420 vs. ExPASy TrEMBL
Match: A0A6J1IS34 (uncharacterized protein LOC111480014 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480014 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.8e-39
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMG 60
          MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQK ETLVGFDAMNMRKMG
Sbjct: 1  MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQK-ETLVGFDAMNMRKMG 60

Query: 61 SGRMRVAVKRIMRRESTANDEREEEDQESSGISGVK 97
          SGRMRVAVKRIMRRESTANDEREEEDQESSGISG K
Sbjct: 61 SGRMRVAVKRIMRRESTANDEREEEDQESSGISGQK 95

[Close]

BLAST of CmaCh14G011420 vs. ExPASy TrEMBL
Match: A0A6J1GY35 (uncharacterized protein LOC111457897 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457897 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.5e-35
Identity = 86/95 (90.53%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMG 60
          MKNITTIFF LPIFLLSLSHALQDHI APLL+IGAQFSESSLQK+ETLVGFDAMNMRKMG
Sbjct: 1  MKNITTIFFILPIFLLSLSHALQDHIGAPLLSIGAQFSESSLQKEETLVGFDAMNMRKMG 60

Query: 61 SGRMRVAVKRIMRRESTANDER-EEEDQESSGISG 95
          +GRMRVA+KRIMRREST NDER EEEDQESS ISG
Sbjct: 61 NGRMRVAIKRIMRRESTTNDEREEEEDQESSRISG 95

[Close]

BLAST of CmaCh14G011420 vs. ExPASy TrEMBL
Match: A0A6J1GWX0 (uncharacterized protein LOC111457897 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457897 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.3e-33
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMG 60
          MKNITTIFF LPIFLLSLSHALQDHI APLL+IGAQFSESSLQK ETLVGFDAMNMRKMG
Sbjct: 1  MKNITTIFFILPIFLLSLSHALQDHIGAPLLSIGAQFSESSLQK-ETLVGFDAMNMRKMG 60

Query: 61 SGRMRVAVKRIMRRESTANDER-EEEDQESSGISG 95
          +GRMRVA+KRIMRREST NDER EEEDQESS ISG
Sbjct: 61 NGRMRVAIKRIMRRESTTNDEREEEEDQESSRISG 94

[Close]

BLAST of CmaCh14G011420 vs. ExPASy TrEMBL
Match: A0A0A0L0U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G124880 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.7e-15
Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 8   FFTLPIFLL--------SLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKM 67
           F +L I+LL        SLSHALQD+ D P L IGA+ SESSL +++ LVGFDA+ +RKM
Sbjct: 9   FLSLTIWLLFLISPLSHSLSHALQDYTDEPFLPIGAELSESSLDEEKNLVGFDAIGLRKM 68

Query: 68  GSGRMRVAVKRIMRRESTANDEREEEDQESSGISGV 96
           GSGR RV VKRI+++E T  ++  +ED+E+S ISG+
Sbjct: 69  GSGRKRVEVKRIVKKEITTTNDGRQEDEENSRISGL 104

[Close]

BLAST of CmaCh14G011420 vs. NCBI nr
Match: KAG7018189.1 (hypothetical protein SDJN02_20057, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 108/115 (93.91%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 1   MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMG 60
           MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQK+ETLVGFDAMNMRKMG
Sbjct: 1   MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKEETLVGFDAMNMRKMG 60

Query: 61  SGRMRVAVKRIMRRESTANDER-EEEDQESSGISGVKNCNLEDEKGDFGDGSVKN 115
           +GRMRVA+KRIMRREST NDER EEEDQESS ISGVKNCNLEDEKGDFG GSVKN
Sbjct: 61  NGRMRVAIKRIMRRESTTNDEREEEEDQESSRISGVKNCNLEDEKGDFGVGSVKN 115

[Close]

BLAST of CmaCh14G011420 vs. NCBI nr
Match: XP_022980731.1 (uncharacterized protein LOC111480014 isoform X1 [Cucurbita maxima])

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-40
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMG 60
          MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMG
Sbjct: 1  MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMG 60

Query: 61 SGRMRVAVKRIMRRESTANDEREEEDQESSGISGVK 97
          SGRMRVAVKRIMRRESTANDEREEEDQESSGISG K
Sbjct: 61 SGRMRVAVKRIMRRESTANDEREEEDQESSGISGQK 96

[Close]

BLAST of CmaCh14G011420 vs. NCBI nr
Match: XP_022980732.1 (uncharacterized protein LOC111480014 isoform X2 [Cucurbita maxima])

HSP 1 Score: 170.2 bits (430), Expect = 1.0e-38
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMG 60
          MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQK ETLVGFDAMNMRKMG
Sbjct: 1  MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQK-ETLVGFDAMNMRKMG 60

Query: 61 SGRMRVAVKRIMRRESTANDEREEEDQESSGISGVK 97
          SGRMRVAVKRIMRRESTANDEREEEDQESSGISG K
Sbjct: 61 SGRMRVAVKRIMRRESTANDEREEEDQESSGISGQK 95

[Close]

BLAST of CmaCh14G011420 vs. NCBI nr
Match: XP_022956104.1 (uncharacterized protein LOC111457897 isoform X1 [Cucurbita moschata])

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-34
Identity = 86/95 (90.53%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MKNITTIFFTLPIFLLSLSHALQDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMG 60
          MKNITTIFF LPIFLLSLSHALQDHI APLL+IGAQFSESSLQK+ETLVGFDAMNMRKMG
Sbjct: 1  MKNITTIFFILPIFLLSLSHALQDHIGAPLLSIGAQFSESSLQKEETLVGFDAMNMRKMG 60

Query: 61 SGRMRVAVKRIMRRESTANDER-EEEDQESSGISG 95
          +GRMRVA+KRIMRREST NDER EEEDQESS ISG
Sbjct: 61 NGRMRVAIKRIMRRESTTNDEREEEEDQESSRISG 95

[Close]

BLAST of CmaCh14G011420 vs. NCBI nr
Match: KAG6581710.1 (hypothetical protein SDJN03_21712, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.4 bits (381), Expect = 4.8e-33
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 23  QDHIDAPLLTIGAQFSESSLQKQETLVGFDAMNMRKMGSGRMRVAVKRIMRRESTANDER 82
           +DHIDAPLLTIGAQFSESSLQK+ETLVGFDAMNMRKMG+GRMRVA+KRIMRREST NDER
Sbjct: 14  KDHIDAPLLTIGAQFSESSLQKEETLVGFDAMNMRKMGNGRMRVAIKRIMRRESTTNDER 73

Query: 83  -EEEDQESSGISGVKNCNLEDEKGDFGDG 111
            EEEDQESS ISGVKNCNLEDEKGDFG G
Sbjct: 74  EEEEDQESSRISGVKNCNLEDEKGDFGVG 102

The following BLAST results are available for this feature:

BLAST of CmaCh14G011420 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G011420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUE5	5.2e-41	98.96	uncharacterized protein LOC111480014 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IS34	4.8e-39	97.92	uncharacterized protein LOC111480014 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GY35	5.5e-35	90.53	uncharacterized protein LOC111457897 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GWX0	2.3e-33	90.53	uncharacterized protein LOC111457897 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0L0U7	1.7e-15	54.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G124880 PE=4 SV=1	[more]

BLAST of CmaCh14G011420 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018189.1	1.5e-47	93.91	hypothetical protein SDJN02_20057, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022980731.1	1.1e-40	98.96	uncharacterized protein LOC111480014 isoform X1 [Cucurbita maxima]	[more]
XP_022980732.1	1.0e-38	97.92	uncharacterized protein LOC111480014 isoform X2 [Cucurbita maxima]	[more]
XP_022956104.1	1.1e-34	90.53	uncharacterized protein LOC111457897 isoform X1 [Cucurbita moschata]	[more]
KAG6581710.1	4.8e-33	91.01	hypothetical protein SDJN03_21712, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmaCh14G011420 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G011420.1	CmaCh14G011420.1	mRNA