CmaCh14G007530 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATGTTCTCTGATTGTTCCACACTTTTGCGTACCTATTTTATCCGACGGCTCCTTCTTCTGAAAGTCCCATTTCGTCTCGGCCGATCATCTATCTCTGTGGCCTAATCCTGACGATTTCATGGCGAATCTGATTCAGGCTCGTTTGATCCATCTCCTCCTGGCTTTGCTGTTCGTCTCGTCAACGATCGCAAGCTCCGATGTCCCGTTCATTGTCGCGCACAAGAAGGCGACGCTCACTCGTCTCAAATCCGGCGTCGAACGCGTCTCGGTCTCAATCGAAATTTACAATCAGGGATCTTCGTATGTTTTGTTTAATTCGTTTAATCTGATTTCGCTTTTGTTTTCTGGATTGAGCTTTACTCATCAAGTGGCCTCTGGGATGTAGATCGAATCGTTGTTTGCGCATGCGTGATTTGATTCATATCTTTTGTTCTGGATCTAAATTGGTTTTGTTTGTACGTTCTTTTTTCTTTTTTTTTTCGCTTCCTTCTGTGCTTGTGATTGGTTTTAAGTTGTCGTCTCGGGGATATAAATGTTAGATTCAGGCGTCAGGAAAATGTTCCCAATGATACAAGATTAGATGCTTTCATGGCTGTGAAATTTGGTGCATTTGTATTTTATGAATTGTGGAAAAAGTTCGCAATGTCTTGGTTCTTGGTTTGACACAAAGATCTTGAATGCTACTATGAACTCGAACCAGGCGTAGCTCTCCTGGCTGCATCAATAAATTCTGTATTTTGGATTTTCTATGTAAGTTTCGCAAAAGGGTTGGCCAGGTCACTTTATTTTGATGAATACTACATTGTCAGTCAGAATATTCGATCAGCCATGATATTTGTTGCCATTCCAGGAGTTAGTGCCTAGATCTTGTTTCACTTTAAAAATTTGTTCATTAGGGCTGCTACATTTGCCCTGCAACGGGAAGATATAAACCGTTCTTCCAGTGATATTTTGTAGAAATTTTACAATTTGATGTAATTTTATTTGTTTATAAACGGTAGCCGTGGTGAGAGGAGGGCTGTGTGTGTGTGTGTGATGAGCATTAACTGGTATTAGAAACTGTCTAGATTAAAGTAGCAGAATTATCTACTTGTCTTGCATGATACAAATCATGAGAAGCTTGGAAGGGGATTCCCAAGATGTTTTTTGACATGTTTCCTATCTTATAATCCCTGATTTGAAGGAATCTTTTCTTTTATCCCGTTGCTCTGTTGCCTTCTATATATTTTCATTTCTAAGTAGCCTGGTTTCTGATTTTCACCCTCTTTTTGGTATTTTCACTTATAACGATTACAGGACCGCATATGATGTTACTCTGAACGATGCAAGCTGGCCAGGAGATGTCTTTGATATTGTCAGTGGCGAGACATCCAAATCGTGGGAAAGACTCGATGCGTAAGTGATATGATTTGTTTAGTATTCTTTCCTATATGCCATGGTGTACCCTCCATTGGGTTTTCGTACCACTAACACAAAAATCTGCTGTTTGACAGTGGTGGTCATTTATCTCATTCATTTGAATTAGAAGCAAAAACAAAAGGAATGTTCCATGGTTCACCTGCTGTTATCACGTTCCGTGTCCCTACGAAGTCTGCTTTACAGGTCAAATATCCTTTCAATAATGATTTTAGTCTGGTTACGTAAGGTTCCAGTCGTTTTACCGTGTTCTTCTTGATTGCTGTAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTCGCTGATAGGCCACCAGAGAAGAAGTTTGAGTGGGTAAGTTCATCCCTTATTTTTTTTTCCCTACTTCAAGCTTAATGATGTATTCTTTTCAATTTGGTTTACTGTAACAATCTTTTTGCCTTTGCATGGAATTTATCTTTCACCCGGGCGTAATTTCAACAGTTTAAGGTACGATCCATTCCGTGCTCTCAATTCTTCTATAAAACTTGAGTTGTATAAGAAAATAGAATGAATGTCTGTCTTTTTATTCATACAAGATTCTTTTTTGCTCCCTGCAGAGGCTGCTCGCTAAGTATGGCTCCCTGATCTCGGTGGTCTCCTTCGTCGTTCTGTTCGTCTATCTTGTGGCCAGCCCATCGAAATCTGCTGCAAAAGGAAGCAAGAAGAAGCGTTAATCGCTGACTGGGAAGTAGTTCTTAGCTGTGTTTTACTTTTGATCCGCCACCCAAATTGAGAATATGTTTGGTTGATATATTTGTTGGGTTAGCACAAAGGTACAGAAACTTCTTGAGTTGATAGTTTTTGTTCATCCCTAATGAGTAGTAGAGCCGGAGGAAACAGAGCTAATTATAGACACGCACGAGAGTCAGTTAAACACATGGTCCAGTAGTTGAGCTGTTTGTTTTAAAGTCATGTCGGATTTGTTCATCATATTACTCACTTGTTTCTTCTTTCCTAGACATGATTCTGAATCCCATTTTCTTTGCCTTATGTTCGTTCTGGACAAATCTGAGGGGGATCATTCTCGGGGCGGTCGATGATGACTTCCCGTTCCTATTTGCCCCTCGTCCAATTCCCCGTTAAATTGTATGATCGGTTCCCGCCCCTGTTATTGTCTTGCCCCTCGTCCAATTCCCCGTTAAATTGTATGATCAGTTCCCATCCCTATTATTGTCTTGCCCCTTGTCTATTTCCCATTAAATTGTAGGATCGTTCCCGATCTTGCCTTGCCCCTCATTTGATTCCCTGTTGAGACCGTTGGATTGGTGTGATGACAATTCCCCGTTACCTCTTCCGACGACGACAATGATTTCTTAACATTCGGACGACAATGGTGTGGTTTAGGGTTCAACTTTTCAGCAATCAATTCCTCCTTAAATTAATGCTAACAATGTGAAATTTATACTCAATTGTCGACACTTTTTTTTTAATTCCTTTTTCTATAAAT ATATGTTCTCTGATTGTTCCACACTTTTGCGTACCTATTTTATCCGACGGCTCCTTCTTCTGAAAGTCCCATTTCGTCTCGGCCGATCATCTATCTCTGTGGCCTAATCCTGACGATTTCATGGCGAATCTGATTCAGGCTCGTTTGATCCATCTCCTCCTGGCTTTGCTGTTCGTCTCGTCAACGATCGCAAGCTCCGATGTCCCGTTCATTGTCGCGCACAAGAAGGCGACGCTCACTCGTCTCAAATCCGGCGTCGAACGCGTCTCGGTCTCAATCGAAATTTACAATCAGGGATCTTCGACCGCATATGATGTTACTCTGAACGATGCAAGCTGGCCAGGAGATGTCTTTGATATTGTCAGTGGCGAGACATCCAAATCGTGGGAAAGACTCGATGCTGGTGGTCATTTATCTCATTCATTTGAATTAGAAGCAAAAACAAAAGGAATGTTCCATGGTTCACCTGCTGTTATCACGTTCCGTGTCCCTACGAAGTCTGCTTTACAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTCGCTGATAGGCCACCAGAGAAGAAGTTTGAGTGGTTTAAGAGGCTGCTCGCTAAGTATGGCTCCCTGATCTCGGTGGTCTCCTTCGTCGTTCTGTTCGTCTATCTTGTGGCCAGCCCATCGAAATCTGCTGCAAAAGGAAGCAAGAAGAAGCGTTAATCGCTGACTGGGAAGTAGTTCTTAGCTGTGTTTTACTTTTGATCCGCCACCCAAATTGAGAATATGTTTGGTTGATATATTTGTTGGGTTAGCACAAAGGTACAGAAACTTCTTGAGTTGATAGTTTTTGTTCATCCCTAATGAGTAGTAGAGCCGGAGGAAACAGAGCTAATTATAGACACGCACGAGAGTCAGTTAAACACATGGTCCAGTAGTTGAGCTGTTTGTTTTAAAGTCATGTCGGATTTGTTCATCATATTACTCACTTGTTTCTTCTTTCCTAGACATGATTCTGAATCCCATTTTCTTTGCCTTATGTTCGTTCTGGACAAATCTGAGGGGGATCATTCTCGGGGCGGTCGATGATGACTTCCCGTTCCTATTTGCCCCTCGTCCAATTCCCCGTTAAATTGTATGATCGGTTCCCGCCCCTGTTATTGTCTTGCCCCTCGTCCAATTCCCCGTTAAATTGTATGATCAGTTCCCATCCCTATTATTGTCTTGCCCCTTGTCTATTTCCCATTAAATTGTAGGATCGTTCCCGATCTTGCCTTGCCCCTCATTTGATTCCCTGTTGAGACCGTTGGATTGGTGTGATGACAATTCCCCGTTACCTCTTCCGACGACGACAATGATTTCTTAACATTCGGACGACAATGGTGTGGTTTAGGGTTCAACTTTTCAGCAATCAATTCCTCCTTAAATTAATGCTAACAATGTGAAATTTATACTCAATTGTCGACACTTTTTTTTTAATTCCTTTTTCTATAAAT ATGGCGAATCTGATTCAGGCTCGTTTGATCCATCTCCTCCTGGCTTTGCTGTTCGTCTCGTCAACGATCGCAAGCTCCGATGTCCCGTTCATTGTCGCGCACAAGAAGGCGACGCTCACTCGTCTCAAATCCGGCGTCGAACGCGTCTCGGTCTCAATCGAAATTTACAATCAGGGATCTTCGACCGCATATGATGTTACTCTGAACGATGCAAGCTGGCCAGGAGATGTCTTTGATATTGTCAGTGGCGAGACATCCAAATCGTGGGAAAGACTCGATGCTGGTGGTCATTTATCTCATTCATTTGAATTAGAAGCAAAAACAAAAGGAATGTTCCATGGTTCACCTGCTGTTATCACGTTCCGTGTCCCTACGAAGTCTGCTTTACAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTCGCTGATAGGCCACCAGAGAAGAAGTTTGAGTGGTTTAAGAGGCTGCTCGCTAAGTATGGCTCCCTGATCTCGGTGGTCTCCTTCGTCGTTCTGTTCGTCTATCTTGTGGCCAGCCCATCGAAATCTGCTGCAAAAGGAAGCAAGAAGAAGCGTTAA MANLIQARLIHLLLALLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGSSTAYDVTLNDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWFKRLLAKYGSLISVVSFVVLFVYLVASPSKSAAKGSKKKR Homology
BLAST of CmaCh14G007530 vs. ExPASy Swiss-Prot
Match: Q5E9E4 (Translocon-associated protein subunit beta OS=Bos taurus OX=9913 GN=SSR2 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.6e-07 Identity = 34/117 (29.06%), Postives = 58/117 (49.57%), Query Frame = 0
BLAST of CmaCh14G007530 vs. ExPASy Swiss-Prot
Match: P23438 (Translocon-associated protein subunit beta OS=Canis lupus familiaris OX=9615 GN=SSR2 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06 Identity = 37/143 (25.87%), Postives = 69/143 (48.25%), Query Frame = 0
BLAST of CmaCh14G007530 vs. ExPASy Swiss-Prot
Match: Q9CPW5 (Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06 Identity = 33/112 (29.46%), Postives = 57/112 (50.89%), Query Frame = 0
BLAST of CmaCh14G007530 vs. ExPASy Swiss-Prot
Match: P43308 (Translocon-associated protein subunit beta OS=Homo sapiens OX=9606 GN=SSR2 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.0e-06 Identity = 35/114 (30.70%), Postives = 58/114 (50.88%), Query Frame = 0
BLAST of CmaCh14G007530 vs. ExPASy TrEMBL
Match: A0A6J1J5V1 (Translocon-associated protein subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111482040 PE=3 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of CmaCh14G007530 vs. ExPASy TrEMBL
Match: A0A6J1J7C6 (Translocon-associated protein subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111482040 PE=3 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 7.8e-98 Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of CmaCh14G007530 vs. ExPASy TrEMBL
Match: A0A6J1FAK9 (Translocon-associated protein subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111442301 PE=3 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 2.3e-97 Identity = 192/194 (98.97%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of CmaCh14G007530 vs. ExPASy TrEMBL
Match: A0A6J1DQQ5 (Translocon-associated protein subunit beta OS=Momordica charantia OX=3673 GN=LOC111023364 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 8.7e-89 Identity = 176/194 (90.72%), Postives = 184/194 (94.85%), Query Frame = 0
BLAST of CmaCh14G007530 vs. ExPASy TrEMBL
Match: A0A0A0LBA3 (Translocon-associated protein subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G597330 PE=3 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 4.8e-87 Identity = 168/186 (90.32%), Postives = 180/186 (96.77%), Query Frame = 0
BLAST of CmaCh14G007530 vs. NCBI nr
Match: XP_022983435.1 (translocon-associated protein subunit beta isoform X2 [Cucurbita maxima]) HSP 1 Score: 369.0 bits (946), Expect = 2.5e-98 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of CmaCh14G007530 vs. NCBI nr
Match: XP_022983434.1 (translocon-associated protein subunit beta isoform X1 [Cucurbita maxima]) HSP 1 Score: 366.3 bits (939), Expect = 1.6e-97 Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of CmaCh14G007530 vs. NCBI nr
Match: XP_022935419.1 (translocon-associated protein subunit beta isoform X1 [Cucurbita moschata] >XP_022935420.1 translocon-associated protein subunit beta isoform X2 [Cucurbita moschata]) HSP 1 Score: 364.8 bits (935), Expect = 4.7e-97 Identity = 192/194 (98.97%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of CmaCh14G007530 vs. NCBI nr
Match: KAG6581125.1 (Translocon-associated protein subunit beta, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 362.8 bits (930), Expect = 1.8e-96 Identity = 191/194 (98.45%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of CmaCh14G007530 vs. NCBI nr
Match: KAG7017859.1 (Translocon-associated protein subunit beta [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 358.2 bits (918), Expect = 4.4e-95 Identity = 191/194 (98.45%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of CmaCh14G007530 vs. TAIR 10
Match: AT5G14030.1 (translocon-associated protein beta (TRAPB) family protein ) HSP 1 Score: 248.1 bits (632), Expect = 6.0e-66 Identity = 125/194 (64.43%), Postives = 154/194 (79.38%), Query Frame = 0
BLAST of CmaCh14G007530 vs. TAIR 10
Match: AT5G14030.2 (translocon-associated protein beta (TRAPB) family protein ) HSP 1 Score: 248.1 bits (632), Expect = 6.0e-66 Identity = 125/194 (64.43%), Postives = 154/194 (79.38%), Query Frame = 0
BLAST of CmaCh14G007530 vs. TAIR 10
Match: AT5G14030.3 (translocon-associated protein beta (TRAPB) family protein ) HSP 1 Score: 248.1 bits (632), Expect = 6.0e-66 Identity = 125/194 (64.43%), Postives = 154/194 (79.38%), Query Frame = 0
BLAST of CmaCh14G007530 vs. TAIR 10
Match: AT5G14030.4 (translocon-associated protein beta (TRAPB) family protein ) HSP 1 Score: 248.1 bits (632), Expect = 6.0e-66 Identity = 125/194 (64.43%), Postives = 154/194 (79.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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