CmaCh12G008640 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGGTCAATGCTCCCAAGAGACGTGAAAAAAAGGGAGGATCTGTGTCCAAAACTTCCTCAAGATAACAAGATGATGACAAAACCCATTGACTTCCCTTCATCTCTAAGAAGTGGCATATTTCTTGCCTTTCCCTCCCCTTTGCTCATACAATGCTGTCACCATTATTCTATTCATATTCATTTCTTGGCTTCAATTATATATTAACTTCCCCATCCACCACCTACCATACCCATCACTTCCTCCATTTTCTCATACTCTTTTCTTCTCAATCATGAAGCTACCTCTCCCTGCTCTGTTTGCTGCACCTCTTGCCTTCTTATTCGCCGTCGCCATCGCCGATCCCGACTTGCTTCAAGACGTTTGCGTCGCCGATCTCACTTCAGGTACCTACTTCAAGTGTTCTAGCTCTGTTCTTTCAAGTTCTTAGGTCTCCCCAATTCTCTAACAGTTGCATAATCATTGGTTTCTAATTTGGGGTTCTGGGTTAAGGTTGTGTGGTTCTAGAGTTGTTTTTTGTTTTCGCTCAAAATGTCTCGTAGTAATAGAAATGTTGTCAAGTTAGAAATGCGAACGATATTCCACAGCAAGAACGAGACGTTGCTCTCTTCTTCAAATCGGAGGTGAATTCGAACTACATTCTAACTTTGACAACATTGATATTGGAAAGTAAACAGAGGAAGAACACAAGATTCAATGATTCTTCTATGTTCTAATCCACGTGGAACAGTTTTCACATCCCTAACCTAACAATATCAAGCAAAATATGCAAGATTCAATGATTCTCCTGTGTTCTAATCCATGTAGAACAGTTCACATCCCTAACCTAACAATATCAAGCAAAATCTGCAAGATTCAATGATTCTCCTATGTTCTAATCCATGTAGAACAGTTTTCACATCCCTAACCTAACAATATCAAGCAAAATCTTCAAGATTCAAAGGTTCTCCTTTGTTCTAATCCATGTGGAACAGTTCTCACATCCCTAACTTAACAATATCAAGCAAAATCTTCAAGTTCAAGCTCAAACTAGGCAAGATCATGGCAGTTCCAAACAGTTTATTTTTCCAGATATTAACATTTGAATCAAAACAGGAATCAAAGTAAACGGATTCACCTGCAAGTCAAATTTCTCAGCGGACGATTTCTTCTTCAATGGATTGGCCAAAGCAGGGCTAACAAACAACACCCAAGGCTCGCGAGTAACTGGCGCCAATGTCCAATCTATCCCCGGCCTGAACACGCTCGGCGTTTCCCTAGCGCGGATCGACTACGCCCCCGGTGGCTTGAATCCACCTCACACACACCCGCGCGCCACCGAGATTGTGTTCGTCATCGAAGGCCAACTCGACGTCGGCTTCATAACCACCGCGAATGTCCTCGTCTCGAAGACGATCAAGACTGGCGAGATCTTCGTGTTCCCCAAGGGATTGGTCCACTTCCAGAAGAACAATGGAAAGGTTCCAGCGGCGGTGATTGCAGCGTTCAACAGTCAGTTGCCTGGTACTCAATCGATTGCAGCGACACTTTTCGCCGCATCTCCGCCGGTGCCGGATAACGTGTTGACGAAGGCGTTTCAAATAGGGACTAAAGAGGTTAAGAAGATCAAATCGAGACTTGCGCCAAAATAAGAGAGGCAAATCAATAGCAGTTTCCGTGAATCGAAATCGAAATCGAAGATTGTGTTTGGAATTGAGTTTGATTTGATTTGATTTTGATTTGGCTGTTGTGTTGTGTTTGTATTGTGATTTGTATCATTGCATTTCTGGGTTCCTTGGTTTCACTGATAATTTGAATAAGAATTGAGATTTGGGGATTTGTTCTTCATTTCTCTCTCCCTTCATTATTTTGGAATCATTTTTTTGATAATGTAGATTGTATAATATTTTTTATTCGAATCAATTTTCTTTTTA TTTGGTCAATGCTCCCAAGAGACGTGAAAAAAAGGGAGGATCTGTGTCCAAAACTTCCTCAAGATAACAAGATGATGACAAAACCCATTGACTTCCCTTCATCTCTAAGAAGTGGCATATTTCTTGCCTTTCCCTCCCCTTTGCTCATACAATGCTGTCACCATTATTCTATTCATATTCATTTCTTGGCTTCAATTATATATTAACTTCCCCATCCACCACCTACCATACCCATCACTTCCTCCATTTTCTCATACTCTTTTCTTCTCAATCATGAAGCTACCTCTCCCTGCTCTGTTTGCTGCACCTCTTGCCTTCTTATTCGCCGTCGCCATCGCCGATCCCGACTTGCTTCAAGACGTTTGCGTCGCCGATCTCACTTCAGGAATCAAAGTAAACGGATTCACCTGCAAGTCAAATTTCTCAGCGGACGATTTCTTCTTCAATGGATTGGCCAAAGCAGGGCTAACAAACAACACCCAAGGCTCGCGAGTAACTGGCGCCAATGTCCAATCTATCCCCGGCCTGAACACGCTCGGCGTTTCCCTAGCGCGGATCGACTACGCCCCCGGTGGCTTGAATCCACCTCACACACACCCGCGCGCCACCGAGATTGTGTTCGTCATCGAAGGCCAACTCGACGTCGGCTTCATAACCACCGCGAATGTCCTCGTCTCGAAGACGATCAAGACTGGCGAGATCTTCGTGTTCCCCAAGGGATTGGTCCACTTCCAGAAGAACAATGGAAAGGTTCCAGCGGCGGTGATTGCAGCGTTCAACAGTCAGTTGCCTGGTACTCAATCGATTGCAGCGACACTTTTCGCCGCATCTCCGCCGGTGCCGGATAACGTGTTGACGAAGGCGTTTCAAATAGGGACTAAAGAGGTTAAGAAGATCAAATCGAGACTTGCGCCAAAATAAGAGAGGCAAATCAATAGCAGTTTCCGTGAATCGAAATCGAAATCGAAGATTGTGTTTGGAATTGAGTTTGATTTGATTTGATTTTGATTTGGCTGTTGTGTTGTGTTTGTATTGTGATTTGTATCATTGCATTTCTGGGTTCCTTGGTTTCACTGATAATTTGAATAAGAATTGAGATTTGGGGATTTGTTCTTCATTTCTCTCTCCCTTCATTATTTTGGAATCATTTTTTTGATAATGTAGATTGTATAATATTTTTTATTCGAATCAATTTTCTTTTTA ATGAAGCTACCTCTCCCTGCTCTGTTTGCTGCACCTCTTGCCTTCTTATTCGCCGTCGCCATCGCCGATCCCGACTTGCTTCAAGACGTTTGCGTCGCCGATCTCACTTCAGGAATCAAAGTAAACGGATTCACCTGCAAGTCAAATTTCTCAGCGGACGATTTCTTCTTCAATGGATTGGCCAAAGCAGGGCTAACAAACAACACCCAAGGCTCGCGAGTAACTGGCGCCAATGTCCAATCTATCCCCGGCCTGAACACGCTCGGCGTTTCCCTAGCGCGGATCGACTACGCCCCCGGTGGCTTGAATCCACCTCACACACACCCGCGCGCCACCGAGATTGTGTTCGTCATCGAAGGCCAACTCGACGTCGGCTTCATAACCACCGCGAATGTCCTCGTCTCGAAGACGATCAAGACTGGCGAGATCTTCGTGTTCCCCAAGGGATTGGTCCACTTCCAGAAGAACAATGGAAAGGTTCCAGCGGCGGTGATTGCAGCGTTCAACAGTCAGTTGCCTGGTACTCAATCGATTGCAGCGACACTTTTCGCCGCATCTCCGCCGGTGCCGGATAACGTGTTGACGAAGGCGTTTCAAATAGGGACTAAAGAGGTTAAGAAGATCAAATCGAGACTTGCGCCAAAATAA MKLPLPALFAAPLAFLFAVAIADPDLLQDVCVADLTSGIKVNGFTCKSNFSADDFFFNGLAKAGLTNNTQGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVIEGQLDVGFITTANVLVSKTIKTGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQLPGTQSIAATLFAASPPVPDNVLTKAFQIGTKEVKKIKSRLAPK Homology
BLAST of CmaCh12G008640 vs. ExPASy Swiss-Prot
Match: Q6I544 (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500 PE=2 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 2.0e-83 Identity = 157/214 (73.36%), Postives = 180/214 (84.11%), Query Frame = 0
BLAST of CmaCh12G008640 vs. ExPASy Swiss-Prot
Match: Q9M263 (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP10 PE=2 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 1.0e-79 Identity = 150/210 (71.43%), Postives = 174/210 (82.86%), Query Frame = 0
BLAST of CmaCh12G008640 vs. ExPASy Swiss-Prot
Match: Q9S8P4 (Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=GER1 PE=1 SV=2) HSP 1 Score: 294.3 bits (752), Expect = 1.1e-78 Identity = 158/217 (72.81%), Postives = 171/217 (78.80%), Query Frame = 0
BLAST of CmaCh12G008640 vs. ExPASy Swiss-Prot
Match: P94014 (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4 PE=2 SV=2) HSP 1 Score: 292.4 bits (747), Expect = 4.3e-78 Identity = 143/201 (71.14%), Postives = 169/201 (84.08%), Query Frame = 0
BLAST of CmaCh12G008640 vs. ExPASy Swiss-Prot
Match: Q9SPV5 (Nectarin-1 OS=Nicotiana plumbaginifolia OX=4092 GN=NEC1 PE=1 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 1.3e-77 Identity = 145/208 (69.71%), Postives = 174/208 (83.65%), Query Frame = 0
BLAST of CmaCh12G008640 vs. TAIR 10
Match: AT3G62020.1 (germin-like protein 10 ) HSP 1 Score: 297.7 bits (761), Expect = 7.3e-81 Identity = 150/210 (71.43%), Postives = 174/210 (82.86%), Query Frame = 0
BLAST of CmaCh12G008640 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 ) HSP 1 Score: 292.4 bits (747), Expect = 3.1e-79 Identity = 143/201 (71.14%), Postives = 169/201 (84.08%), Query Frame = 0
BLAST of CmaCh12G008640 vs. TAIR 10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor ) HSP 1 Score: 281.2 bits (718), Expect = 7.1e-76 Identity = 140/217 (64.52%), Postives = 171/217 (78.80%), Query Frame = 0
BLAST of CmaCh12G008640 vs. TAIR 10
Match: AT3G62020.2 (germin-like protein 10 ) HSP 1 Score: 275.4 bits (703), Expect = 3.9e-74 Identity = 135/181 (74.59%), Postives = 157/181 (86.74%), Query Frame = 0
BLAST of CmaCh12G008640 vs. TAIR 10
Match: AT5G26700.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 251.1 bits (640), Expect = 7.8e-67 Identity = 121/199 (60.80%), Postives = 159/199 (79.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|