CmaCh11G011190 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G011190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	BnaC09g29090D protein
Location	Cma_Chr11: 6289920 .. 6290991 (+)
RNA-Seq Expression	CmaCh11G011190
Synteny	CmaCh11G011190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAACGCATTAGGAGGGTTATTATAATTTTATTATAATTTTAATTTAGTTAATATTATACCATTTTGTTTATTTCCGAATAGTAACCAAGTATATGGGCGTGCCGGAGTGGTTATTGGGCATGACTAGAAATCATGTGGGCTCTACACGTGCAGGAGATATCGTGGTATGGATGTTTTAGCTCTCGATTTAAAAATACTCAACCATTAATAACTTCTGCTATAAATACTCCACCGTTAATAATTTCTATTACCACATCCCATGATTTCAACATGATTCACAATATTGTCACTTCCTACGACTCAATCTAAATGTTCAATTGCAAATGAGGGAGAAACTTCACCGAGTTCACATTCGGAACTTTTGAACATGAAGTGAGGGAGAATACCCTAAACCAAAATAGTAAAACTTACTTCTAAAACCTCTCTTACCTATCCTATCTATTAGGTTTTATAAATTCTAAGCCTACAACTAGCTCGAGAGCTAGAAAAATTCAAAAATTCAGATTTTAATCATATTTTCAAGCTACGGTTGATCGATCTGATGCTGGTATTCTTAATCTTTCTCAATTTTTAGTTTAGGGTTGAACACGAGATTAGCGTAG

mRNA sequence

ATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGGTTGAACACGAGATTAGCGTAG

Coding sequence (CDS)

ATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGGTTGAACACGAGATTAGCGTAG

Protein sequence

MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGLNTRLA

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh11G011190 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh11G011190 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G011190.1	CmaCh11G011190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast