CmaCh11G003450 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G003450
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Clavata3/ESR (CLE) gene family member
Location	Cma_Chr11: 1708232 .. 1708516 (-)
RNA-Seq Expression	CmaCh11G003450
Synteny	CmaCh11G003450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCTAGCTCAGTCCAGCATTTTGGTGCTCTCGCTATCGGTTTTCGTCTGCATCGGCTCGGTCGTCGGAGCTCGGAAGATGTTGTTCTTGGCTCAAGACAGTACCAGAGACAACAACAGCTTGACGATTGCCATGGAGAATAGCAGAAGGTGCAAGTCAAAGAAGCTGTATTGTTGTGGGTGCTTCTTCTCAAGCTCTGAGAAGACGATCAATAATGCTACCAGTAGTTCTGAGGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAATAAGTAG

mRNA sequence

ATGAGGCTAGCTCAGTCCAGCATTTTGGTGCTCTCGCTATCGGTTTTCGTCTGCATCGGCTCGGTCGTCGGAGCTCGGAAGATGTTGTTCTTGGCTCAAGACAGTACCAGAGACAACAACAGCTTGACGATTGCCATGGAGAATAGCAGAAGGTGCAAGTCAAAGAAGCTGTATTGTTGTGGGTGCTTCTTCTCAAGCTCTGAGAAGACGATCAATAATGCTACCAGTAGTTCTGAGGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAATAAGTAG

Coding sequence (CDS)

ATGAGGCTAGCTCAGTCCAGCATTTTGGTGCTCTCGCTATCGGTTTTCGTCTGCATCGGCTCGGTCGTCGGAGCTCGGAAGATGTTGTTCTTGGCTCAAGACAGTACCAGAGACAACAACAGCTTGACGATTGCCATGGAGAATAGCAGAAGGTGCAAGTCAAAGAAGCTGTATTGTTGTGGGTGCTTCTTCTCAAGCTCTGAGAAGACGATCAATAATGCTACCAGTAGTTCTGAGGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAATAAGTAG

Protein sequence

MRLAQSSILVLSLSVFVCIGSVVGARKMLFLAQDSTRDNNSLTIAMENSRRCKSKKLYCCGCFFSSSEKTINNATSSSEEKRVVPTGPNPLHNK

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh11G003450 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh11G003450 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..94
None	No IPR available	PANTHER	PTHR34545:SF10	CLAVATA3/ESR (CLE) GENE FAMILY MEMBER	coord: 1..94
IPR033249	CLAVATA3/ESR (CLE)-related protein, plant	PANTHER	PTHR34545	CLAVATA3/ESR (CLE)-RELATED PROTEIN 22	coord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G003450.1	CmaCh11G003450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0048731	system development
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity