CmaCh08G006480 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G006480
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Protein Ycf2
Location	Cma_Chr08: 3766762 .. 3767887 (+)
RNA-Seq Expression	CmaCh08G006480
Synteny	CmaCh08G006480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATTTCGAGTCAGTGTTTACATAATCTTCTTCTGTCCCAAGAAATGATTCATCGAAATAAATAATGAGTCACCATCGATATCGACACATCTGAGATCGCCAAATATTCGGGAGTTCCTCTATTCATTCAATCCTTTTCCTTCTTCTTCTTGCTGTATATCTCGTTCGTACACATCTTTTCTTTGTTTCTCGAGCCTATAGTGAGTTACAGACAGAGTGAGAAAAGGTCAAATCTTTATTGAGTTGCGAAAAGGATAGGTATCCCACATCTTCACTTCATTCTTTATGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATAGGGTAGGGGTAGGGGGAGGGGTTTCCGCTTCTGGTGGCAACATGCTATGGGGTGGCGGTCCCTCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTTGAATATCAATCTCACTCATAAGTATCATACCAAATTCCATCAATAGAATAGCTTTTTCGAGAAATACGAGACATTTAAGTCATACAAGTAAAGAGATATATTATTCATATAAGACAAAATGTGAACGGTTATTGGATTGATGAGAAAGAAAGAGAATTCTTGGTTCACCACCTTAACGACAGAAAAAAGGATTGATCAAATTCTATTGGTTCTGACTCATAGTGAGAATTTCTCAAAGAATGACTCTGGTTGGTTATCAAATGATTGAACAACCGGGAGTAATTGACTTACGAGACTTAGTGGACATTCATCTTTAGCAGAAAGACAGACATTCCTTGCTCATTATCAGACAATCACTTATTCACAAACCTCGTGTGTGGCTAATAGTTTGTTTGAATTTCCCATCTCATGGAAAACCCTTTTCCCTCCGCTTAACCCTATCCCCGCGGGTATTTTAGTGATAGATTCTATAGGAACTGGACGATCCATCCTATTTGGTCAAATACCTAGCGACAAACTCCTATCTTCCTTTCATTACAGGTATTTCTGAACAAGTTCCTGGATAACAAGCCTAAGGGTTTGATTATTGATTGATGATAGTGGCGAATGATAGTGACGATATCGACCGTGACCTTGAGGCTGAAGCTTCTAAGATGAATGCGCTATGGATATGA

mRNA sequence

ATGAGATTTCGAGTCATCACCATCGATATCGACACATCTGAGATCGCCAAATATTCGGGAGTTCCTCTATTCATTCAATCCTTTTCCTTCTTCTTCTTGCTGTATATCTCGTTCGTACACATCTTTTCTTTGTTTCTCGAGCCTATAGTATCCCACATCTTCACTTCATTCTTTATGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATAGGGTAGGGGTAGGGGGAGGGGTTTCCGCTTCTGGTGGCAACATGCTATGGGGTGGCGGTCCCTCTTATGGGAAAGACAGACATTCCTTGCTCATTATCAGACAATCACTTATTCACAAACCTCGTGTGTGGCTAATAGTTTGTTTGAATTTCCCATCTCATGGAAAACCCTTTTCCCTCCGCTTAACCCTATCCCCGCGGGAACTGGACGATCCATCCTATTTGGTCAAATACCTAGCGACAAACTCCTATCTTCCTTTCATTACAGTGGCGAATGATAGTGACGATATCGACCGTGACCTTGAGGCTGAAGCTTCTAAGATGAATGCGCTATGGATATGA

Coding sequence (CDS)

ATGAGATTTCGAGTCATCACCATCGATATCGACACATCTGAGATCGCCAAATATTCGGGAGTTCCTCTATTCATTCAATCCTTTTCCTTCTTCTTCTTGCTGTATATCTCGTTCGTACACATCTTTTCTTTGTTTCTCGAGCCTATAGTATCCCACATCTTCACTTCATTCTTTATGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATAGGGTAGGGGTAGGGGGAGGGGTTTCCGCTTCTGGTGGCAACATGCTATGGGGTGGCGGTCCCTCTTATGGGAAAGACAGACATTCCTTGCTCATTATCAGACAATCACTTATTCACAAACCTCGTGTGTGGCTAATAGTTTGTTTGAATTTCCCATCTCATGGAAAACCCTTTTCCCTCCGCTTAACCCTATCCCCGCGGGAACTGGACGATCCATCCTATTTGGTCAAATACCTAGCGACAAACTCCTATCTTCCTTTCATTACAGTGGCGAATGATAGTGACGATATCGACCGTGACCTTGAGGCTGAAGCTTCTAAGATGAATGCGCTATGGATATGA

Protein sequence

MRFRVITIDIDTSEIAKYSGVPLFIQSFSFFFLLYISFVHIFSLFLEPIVSHIFTSFFMVKESLSSCSGTIRRFSRRNRVGVGGGVSASGGNMLWGGGPSYGKDRHSLLIIRQSLIHKPRVWLIVCLNFPSHGKPFSLRLTLSPRELDDPSYLVKYLATNSYLPFITVANDSDDIDRDLEAEASKMNALWI

Homology

[Close]

BLAST of CmaCh08G006480 vs. ExPASy Swiss-Prot
Match: A4GGE1 (Protein Ycf2 OS=Phaseolus vulgaris OX=3885 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.8e-12
Identity = 45/111 (40.54%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 104  DRHSLLIIRQSLIHKPRVWLIVCLNFPSHGKPFSLRLTLSPREL---------DDPSYLV 163
            +RH  L   Q++ +   +W     +FPSHGKPFSLRL L P               SYLV
Sbjct: 1580 ERHIFLANYQTITYSQTLWGANSFHFPSHGKPFSLRLALPPPSRGILVIGSIGTGRSYLV 1639

Query: 164  KYLATNSYLPFITV-----------------------ANDSDDIDRDLEAE 183
            KYLA NSY+PFITV                       ++DSDDIDRDL+ E
Sbjct: 1640 KYLAKNSYVPFITVFLNKFLDNKPKGFLIDDSDDIDDSDDSDDIDRDLDIE 1690

[Close]

BLAST of CmaCh08G006480 vs. ExPASy Swiss-Prot
Match: P08973 (Protein Ycf2 OS=Spinacia oleracea OX=3562 GN=ycf2-A PE=3 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11
Identity = 45/87 (51.72%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 128  NFPSHGKPFSLRLTLSPRE--------LDDPSYLVKYLATNSYLPFITV----------- 187
            +FPSHGKPFSLRL LSP              SYLVKYLATNSY+PFITV           
Sbjct: 1460 HFPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPK 1519

Query: 188  ---ANDSDDIDRDLEAE---ASKMNAL 190
                + SDDIDRDL+ E    + MNAL
Sbjct: 1520 GSLIDASDDIDRDLDTELELLTMMNAL 1546

[Close]

BLAST of CmaCh08G006480 vs. ExPASy Swiss-Prot
Match: A0A379 (Protein Ycf2 OS=Coffea arabica OX=13443 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 45/98 (45.92%), Postives = 50/98 (51.02%), Query Frame = 0


Query: 128  NFPSHGKPFSLRLTLSPREL--------DDPSYLVKYLATNSYLPFITV----------- 187
            +FPSHGKPFSLRL LSP              SYLVKYLATNSY+PFITV           
Sbjct: 1611 HFPSHGKPFSLRLALSPSRAILVIGSIGSGRSYLVKYLATNSYVPFITVFLNKFLDNKPK 1670

Query: 188  --------------ANDSDDIDRDLEAE---ASKMNAL 190
                           + SDDIDRDL+ E    + MNAL
Sbjct: 1671 GFLIDDINIDDSDDIDASDDIDRDLDTELELLTMMNAL 1708

[Close]

BLAST of CmaCh08G006480 vs. ExPASy Swiss-Prot
Match: Q09WV7 (Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 46/93 (49.46%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 128  NFPSHGKPFSLRLTLS-PREL-------DDPSYLVKYLATNSYLPFITV----------- 187
            +FPSHGKPFSLRL LS  R +          SYLVKYLATNSY+PFITV           
Sbjct: 1620 HFPSHGKPFSLRLALSLSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPK 1679

Query: 188  ---------ANDSDDIDRDLEAE---ASKMNAL 190
                      +DSDDIDRDL+ E    + MNAL
Sbjct: 1680 GFLIDDSDDIDDSDDIDRDLDTELELLTMMNAL 1712

[Close]

BLAST of CmaCh08G006480 vs. ExPASy Swiss-Prot
Match: Q2QD30 (Protein Ycf2 OS=Cucumis sativus OX=3659 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-10
Identity = 46/113 (40.71%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 104  DRHSLLIIRQSLIHKPRVWLIVCLNFPSHGKPFSLRLTLSPREL------DDPSYLVKYL 163
            +R + L   Q++ H          +FPSHGK FSLRL LSP  L         SYLVKYL
Sbjct: 1291 ERRTFLAHYQTITHSQTSCGANSFHFPSHGKLFSLRLALSPGILVIGSIGTGRSYLVKYL 1350

Query: 164  ATNSYLPFITV----------------------------ANDSDDIDRDLEAE 183
            ATNSYLPFITV                             +DSDDIDRDL+ +
Sbjct: 1351 ATNSYLPFITVFLNKFRDNKPKFIDDSDDDSDDIDDSGDIDDSDDIDRDLDID 1403

[Close]

BLAST of CmaCh08G006480 vs. ExPASy TrEMBL
Match: A0A7J6ENG8 (AAA domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_004494 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-13
Identity = 60/138 (43.48%), Postives = 73/138 (52.90%), Query Frame = 0


Query: 87  SASGGNMLWGGGPSYG----KDRHSLLIIRQSLIHKPRVWLIVCLNFPSHGKPFSLRLTL 146
           SASGG+MLWGGGP+YG     +R   L   Q++ +          +FPSHGKPFSLRL L
Sbjct: 47  SASGGSMLWGGGPTYGVKSISERRIFLSHYQTIAYSQTSCGANSFHFPSHGKPFSLRLAL 106

Query: 147 S-PREL-------DDPSYLVKYLATNSYLPFITV--------------------ANDSDD 190
           S  R +          SYLVKYLATNSY+PFI V                     +DSDD
Sbjct: 107 SLSRGILVIGSIGTGRSYLVKYLATNSYVPFIIVFLNKFLDNKPKGFLIDDSDDIDDSDD 166

[Close]

BLAST of CmaCh08G006480 vs. ExPASy TrEMBL
Match: B9SHW9 (AAA domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0568360 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.7e-12
Identity = 62/152 (40.79%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 87  SASGGNMLWGGGPSYG----KDRHSLLIIRQSLIHKPRVWL--------------IVCLN 146
           SASGGN LWGGGP+YG    +     L I    + K R++L              +   +
Sbjct: 109 SASGGNKLWGGGPAYGVKSIRSEKKFLNINLIDLIKIRIFLTYYQTTTYSQTSCGVNSFH 168

Query: 147 FPSHGKPFSLRLTLSPRE--------LDDPSYLVKYLATNSYLPFITV------------ 190
           FPSHGKPFSL L LSP              SYLVKYLATNSYLPFITV            
Sbjct: 169 FPSHGKPFSLCLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKG 228

[Close]

BLAST of CmaCh08G006480 vs. ExPASy TrEMBL
Match: A0A2G2VDC7 (Protein Ycf2 OS=Capsicum baccatum OX=33114 GN=CQW23_27275 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-10
Identity = 54/118 (45.76%), Postives = 58/118 (49.15%), Query Frame = 0


Query: 103  KDRHSLLIIRQSLIHKPRVWLIV-----------------CLNFPSHGKPFSLRLTLSPR 162
            KD +SLLIIRQSLIHK RV                       +FPSHGKPFSLRL LSP 
Sbjct: 1388 KDGYSLLIIRQSLIHKLRVGKXSPCSLSDNTYSQTSCGENSFHFPSHGKPFSLRLALSPS 1447

Query: 163  E--------LDDPSYLVKYLATNSYLPFITV-------------------ANDSDDID 177
                         SYLVKYLATNSY+PFITV                    +DSDDID
Sbjct: 1448 RGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLYNKPKGFLLDEIDIDDSDDID 1505

[Close]

BLAST of CmaCh08G006480 vs. ExPASy TrEMBL
Match: A0A7S6QYT6 (Hypothetical chloroplast RF21 OS=Gentiana manshurica OX=683755 GN=ycf2 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.6e-10
Identity = 50/116 (43.10%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 104  DRHSLLIIRQSLIHKPRVWLIVCLNFPSHGKPFSLRLTLSPRE--------LDDPSYLVK 163
            +R   L   Q+L +     +    NFPSHGKPFSLRL LSP              SYLVK
Sbjct: 1573 ERRIFLAHYQTLTYSQTSCVANSFNFPSHGKPFSLRLALSPSRGILVIGSIGSGRSYLVK 1632

Query: 164  YLATNSYLPFITV-------------------ANDSDDIDRDLEAE---ASKMNAL 190
            YLA NSY+PFITV                    +DSDDIDRDL+ E    + MNAL
Sbjct: 1633 YLAANSYVPFITVFLNKFLDNKPKGFLIDDINIDDSDDIDRDLDTELELLTTMNAL 1688

[Close]

BLAST of CmaCh08G006480 vs. ExPASy TrEMBL
Match: A0A2U8U5P8 (Protein Ycf2 OS=Banisteriopsis caapi OX=577683 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 4.6e-10
Identity = 49/117 (41.88%), Postives = 59/117 (50.43%), Query Frame = 0


Query: 104  DRHSLLIIRQSLIHKPRVWLIVCLNFPSHGKPFSLRLTLSPRE--------LDDPSYLVK 163
            +R   L   Q++ +    W     +FPS GKPFSLRL LSP              SYLVK
Sbjct: 1594 ERRIFLAHYQTITYSQTSWGANSFHFPSQGKPFSLRLALSPSRGILVIGSIGTGRSYLVK 1653

Query: 164  YLATNSYLPFITV--------------------ANDSDDIDRDLEAE---ASKMNAL 190
            YLATNSY+PFITV                     +DSDDIDRDL+ E    ++MNAL
Sbjct: 1654 YLATNSYVPFITVFLNKFLDNKPKGFLIDDSDDIDDSDDIDRDLDTELELLTRMNAL 1710

[Close]

BLAST of CmaCh08G006480 vs. NCBI nr
Match: KAF4359987.1 (hypothetical protein F8388_004494 [Cannabis sativa])

HSP 1 Score: 86.7 bits (213), Expect = 2.4e-13
Identity = 60/138 (43.48%), Postives = 73/138 (52.90%), Query Frame = 0


Query: 87  SASGGNMLWGGGPSYG----KDRHSLLIIRQSLIHKPRVWLIVCLNFPSHGKPFSLRLTL 146
           SASGG+MLWGGGP+YG     +R   L   Q++ +          +FPSHGKPFSLRL L
Sbjct: 47  SASGGSMLWGGGPTYGVKSISERRIFLSHYQTIAYSQTSCGANSFHFPSHGKPFSLRLAL 106

Query: 147 S-PREL-------DDPSYLVKYLATNSYLPFITV--------------------ANDSDD 190
           S  R +          SYLVKYLATNSY+PFI V                     +DSDD
Sbjct: 107 SLSRGILVIGSIGTGRSYLVKYLATNSYVPFIIVFLNKFLDNKPKGFLIDDSDDIDDSDD 166

[Close]

BLAST of CmaCh08G006480 vs. NCBI nr
Match: EEF36790.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 82.8 bits (203), Expect = 3.5e-12
Identity = 62/152 (40.79%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 87  SASGGNMLWGGGPSYG----KDRHSLLIIRQSLIHKPRVWL--------------IVCLN 146
           SASGGN LWGGGP+YG    +     L I    + K R++L              +   +
Sbjct: 109 SASGGNKLWGGGPAYGVKSIRSEKKFLNINLIDLIKIRIFLTYYQTTTYSQTSCGVNSFH 168

Query: 147 FPSHGKPFSLRLTLSPRE--------LDDPSYLVKYLATNSYLPFITV------------ 190
           FPSHGKPFSL L LSP              SYLVKYLATNSYLPFITV            
Sbjct: 169 FPSHGKPFSLCLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKG 228

[Close]

BLAST of CmaCh08G006480 vs. NCBI nr
Match: PHT30938.1 (Protein Ycf2 [Capsicum baccatum])

HSP 1 Score: 76.3 bits (186), Expect = 3.3e-10
Identity = 54/118 (45.76%), Postives = 58/118 (49.15%), Query Frame = 0


Query: 103  KDRHSLLIIRQSLIHKPRVWLIV-----------------CLNFPSHGKPFSLRLTLSPR 162
            KD +SLLIIRQSLIHK RV                       +FPSHGKPFSLRL LSP 
Sbjct: 1388 KDGYSLLIIRQSLIHKLRVGKXSPCSLSDNTYSQTSCGENSFHFPSHGKPFSLRLALSPS 1447

Query: 163  E--------LDDPSYLVKYLATNSYLPFITV-------------------ANDSDDID 177
                         SYLVKYLATNSY+PFITV                    +DSDDID
Sbjct: 1448 RGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLYNKPKGFLLDEIDIDDSDDID 1505

[Close]

BLAST of CmaCh08G006480 vs. NCBI nr
Match: YP_010030731.1 (hypothetical chloroplast RF21 [Gentiana manshurica] >YP_010030750.1 hypothetical chloroplast RF21 [Gentiana manshurica] >QXI83755.1 hypothetical protein RF2 [Gentiana scabra] >QOV01632.1 hypothetical chloroplast RF21 [Gentiana manshurica] >QOV01633.1 hypothetical chloroplast RF21 [Gentiana manshurica] >QXI83774.1 hypothetical protein RF2 [Gentiana scabra] >QZJ46223.1 Ycf2 protein [Gentiana manshurica])

HSP 1 Score: 75.1 bits (183), Expect = 7.3e-10
Identity = 50/116 (43.10%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 104  DRHSLLIIRQSLIHKPRVWLIVCLNFPSHGKPFSLRLTLSPRE--------LDDPSYLVK 163
            +R   L   Q+L +     +    NFPSHGKPFSLRL LSP              SYLVK
Sbjct: 1573 ERRIFLAHYQTLTYSQTSCVANSFNFPSHGKPFSLRLALSPSRGILVIGSIGSGRSYLVK 1632

Query: 164  YLATNSYLPFITV-------------------ANDSDDIDRDLEAE---ASKMNAL 190
            YLA NSY+PFITV                    +DSDDIDRDL+ E    + MNAL
Sbjct: 1633 YLAANSYVPFITVFLNKFLDNKPKGFLIDDINIDDSDDIDRDLDTELELLTTMNAL 1688

[Close]

BLAST of CmaCh08G006480 vs. NCBI nr
Match: QZJ46394.1 (Ycf2 protein [Gentiana triflora] >QZJ46412.1 Ycf2 protein [Gentiana triflora])

HSP 1 Score: 75.1 bits (183), Expect = 7.3e-10
Identity = 50/116 (43.10%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 104  DRHSLLIIRQSLIHKPRVWLIVCLNFPSHGKPFSLRLTLSPRE--------LDDPSYLVK 163
            +R   L   Q+L +     +    NFPSHGKPFSLRL LSP              SYLVK
Sbjct: 1573 ERRIFLAHYQTLTYSQTSCVANSFNFPSHGKPFSLRLALSPSRGILVIGSIGSGRSYLVK 1632

Query: 164  YLATNSYLPFITV-------------------ANDSDDIDRDLEAE---ASKMNAL 190
            YLA NSY+PFITV                    +DSDDIDRDL+ E    + MNAL
Sbjct: 1633 YLAANSYVPFITVFLNKFLDNKPKGFLIDDINIDDSDDIDRDLDTELELLTTMNAL 1688

[Close]

BLAST of CmaCh08G006480 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 64.7 bits (156), Expect = 9.2e-11
Identity = 45/98 (45.92%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 128  NFPSHGKPFSLRLTLSPREL--------DDPSYLVKYLATNSYLPFITV----------- 187
            +FPSHGKPFSLRL LSP              SYLVKYLATNSY+PFITV           
Sbjct: 1624 HFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPK 1683

Query: 188  --------ANDSD------DIDRDLEAE---ASKMNAL 190
                     +DSD      DIDR+L+ E    + MNAL
Sbjct: 1684 GFFIDDIDIDDSDDIDASNDIDRELDTELELLTMMNAL 1721

[Close]

BLAST of CmaCh08G006480 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 64.7 bits (156), Expect = 9.2e-11
Identity = 45/98 (45.92%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 128  NFPSHGKPFSLRLTLSPREL--------DDPSYLVKYLATNSYLPFITV----------- 187
            +FPSHGKPFSLRL LSP              SYLVKYLATNSY+PFITV           
Sbjct: 1624 HFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPK 1683

Query: 188  --------ANDSD------DIDRDLEAE---ASKMNAL 190
                     +DSD      DIDR+L+ E    + MNAL
Sbjct: 1684 GFFIDDIDIDDSDDIDASNDIDRELDTELELLTMMNAL 1721

The following BLAST results are available for this feature:

BLAST of CmaCh08G006480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4GGE1	2.8e-12	40.54	Protein Ycf2 OS=Phaseolus vulgaris OX=3885 GN=ycf2-A PE=3 SV=1	[more]
P08973	1.8e-11	51.72	Protein Ycf2 OS=Spinacia oleracea OX=3562 GN=ycf2-A PE=3 SV=2	[more]
A0A379	1.2e-10	45.92	Protein Ycf2 OS=Coffea arabica OX=13443 GN=ycf2-A PE=3 SV=1	[more]
Q09WV7	1.2e-10	49.46	Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1	[more]
Q2QD30	1.5e-10	40.71	Protein Ycf2 OS=Cucumis sativus OX=3659 GN=ycf2-A PE=3 SV=1	[more]

BLAST of CmaCh08G006480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6ENG8	1.2e-13	43.48	AAA domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_004494 PE=3 SV...	[more]
B9SHW9	1.7e-12	40.79	AAA domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0568360 PE=3 S...	[more]
A0A2G2VDC7	1.6e-10	45.76	Protein Ycf2 OS=Capsicum baccatum OX=33114 GN=CQW23_27275 PE=3 SV=1	[more]
A0A7S6QYT6	3.6e-10	43.10	Hypothetical chloroplast RF21 OS=Gentiana manshurica OX=683755 GN=ycf2 PE=4 SV=1	[more]
A0A2U8U5P8	4.6e-10	41.88	Protein Ycf2 OS=Banisteriopsis caapi OX=577683 GN=ycf2 PE=3 SV=1	[more]

BLAST of CmaCh08G006480 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF4359987.1	2.4e-13	43.48	hypothetical protein F8388_004494 [Cannabis sativa]	[more]
EEF36790.1	3.5e-12	40.79	conserved hypothetical protein [Ricinus communis]	[more]
PHT30938.1	3.3e-10	45.76	Protein Ycf2 [Capsicum baccatum]	[more]
YP_010030731.1	7.3e-10	43.10	hypothetical chloroplast RF21 [Gentiana manshurica] >YP_010030750.1 hypothetical...	[more]
QZJ46394.1	7.3e-10	43.10	Ycf2 protein [Gentiana triflora] >QZJ46412.1 Ycf2 protein [Gentiana triflora]	[more]

BLAST of CmaCh08G006480 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	9.2e-11	45.92	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	9.2e-11	45.92	Chloroplast Ycf2;ATPase, AAA type, core	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G006480.1	CmaCh08G006480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity