Bhi04M001334 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi04M001334
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr4: 42091562 .. 42091873 (+)
Sequence length	312
RNA-Seq Expression	Bhi04M001334
Synteny	Bhi04M001334

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAATCCTTACGGCTAGCGATTGATCTTAATGAAAGGCCTCCCATTCCCACCTCTAAAGAAAGTATCCCTTCTCCACCACCTTTTGACCTACGAGAAAAAACTCCTCCTTTGTCGCCACAAACACAACAAACTCAAGATCTTGAGGAGTCAGCTCAATGTGAGCTTTTGCCACTGCGCATCTTCTCTAAGCTTAGACGCAAAACACCCCAAGGCCCCACCATCAATCTTATCGACATAGAGATGACTGACCTAGAGACATTTTGGAGAGAACAAATTCCAAATCCTCACAACCAGTCAATTAGTTAG

mRNA sequence

ATGGAAGAATCCTTACGGCTAGCGATTGATCTTAATGAAAGGCCTCCCATTCCCACCTCTAAAGAAAGTATCCCTTCTCCACCACCTTTTGACCTACGAGAAAAAACTCCTCCTTTGTCGCCACAAACACAACAAACTCAAGATCTTGAGGAGTCAGCTCAATGTGAGCTTTTGCCACTGCGCATCTTCTCTAAGCTTAGACGCAAAACACCCCAAGGCCCCACCATCAATCTTATCGACATAGAGATGACTGACCTAGAGACATTTTGGAGAGAACAAATTCCAAATCCTCACAACCAGTCAATTAGTTAG

Coding sequence (CDS)

ATGGAAGAATCCTTACGGCTAGCGATTGATCTTAATGAAAGGCCTCCCATTCCCACCTCTAAAGAAAGTATCCCTTCTCCACCACCTTTTGACCTACGAGAAAAAACTCCTCCTTTGTCGCCACAAACACAACAAACTCAAGATCTTGAGGAGTCAGCTCAATGTGAGCTTTTGCCACTGCGCATCTTCTCTAAGCTTAGACGCAAAACACCCCAAGGCCCCACCATCAATCTTATCGACATAGAGATGACTGACCTAGAGACATTTTGGAGAGAACAAATTCCAAATCCTCACAACCAGTCAATTAGTTAG

Protein sequence

MEESLRLAIDLNERPPIPTSKESIPSPPPFDLREKTPPLSPQTQQTQDLEESAQCELLPLRIFSKLRRKTPQGPTINLIDIEMTDLETFWREQIPNPHNQSIS

Homology

The following BLAST results are available for this feature:

BLAST of Bhi04M001334 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi04M001334 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi04M001334 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi04G001334	Bhi04G001334	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi04M001334.exon1	Bhi04M001334.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi04M001334	cds.Bhi04M001334	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi04M001334	Bhi04M001334-protein	polypeptide