CmoCh20G004650 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh20G004650
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	MYB transcription factor
Location	Cmo_Chr20: 2155745 .. 2156170 (+)
RNA-Seq Expression	CmoCh20G004650
Synteny	CmoCh20G004650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAGGGACAGGAAATCAGAAAGGGTCCATGGACAGAGCAAGAAGACATCCAACTGATATGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCTAAAGTTTCAGGTTTGAAGGTGGCGGGAGACAGTTGCTAGGTAGGCTAAACTGAAGATTTGCTATTTTTGTGAAAGGCTCTGTTTTAACTTCCCATTTGGATTTGGGATTTGGGATTTGGAATTTGTGTTGTAGGACTAAACAGAACAGGAAAAAGTTGCAGGCTGAGATGGGTTAATTACCTTCATCCTGGTCTCAAGAGAGGCAAGATGACTGCTCAAGAAGAACGACTCGTGCTTGAACTTCACAACAAATGGGGAAACAGGTCTATCCCTAGAACTATGAAACCTCTCCCTAGCAGACGCGTTTTAAAACCTTGA

mRNA sequence

ATGGTTGAGGGACAGGAAATCAGAAAGGGTCCATGGACAGAGCAAGAAGACATCCAACTGATATGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCTAAAGTTTCAGGTTTGAAGGTGGCGGGAGACAGACTAAACAGAACAGGAAAAAGTTGCAGGCTGAGATGGGTTAATTACCTTCATCCTGGTCTCAAGAGAGGCAAGATGACTGCTCAAGAAGAACGACTCGTGCTTGAACTTCACAACAAATGGGGAAACAGGTCTATCCCTAGAACTATGAAACCTCTCCCTAGCAGACGCGTTTTAAAACCTTGA

Coding sequence (CDS)

ATGGTTGAGGGACAGGAAATCAGAAAGGGTCCATGGACAGAGCAAGAAGACATCCAACTGATATGCTTTGTGGGCTTGTTTGGCGATCGAAGATGGGATTTCATTGCTAAAGTTTCAGGTTTGAAGGTGGCGGGAGACAGACTAAACAGAACAGGAAAAAGTTGCAGGCTGAGATGGGTTAATTACCTTCATCCTGGTCTCAAGAGAGGCAAGATGACTGCTCAAGAAGAACGACTCGTGCTTGAACTTCACAACAAATGGGGAAACAGGTCTATCCCTAGAACTATGAAACCTCTCCCTAGCAGACGCGTTTTAAAACCTTGA

Protein sequence

MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSRRVLKP

Homology

[Close]

BLAST of CmoCh20G004650 vs. ExPASy Swiss-Prot
Match: Q4JL84 (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 3.8e-35
Identity = 73/98 (74.49%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLH 64
           +E RKGPWTEQEDI L+ FV LFGDRRWDF+AKVSG       LNRTGKSCRLRWVNYLH
Sbjct: 6   EEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSG-------LNRTGKSCRLRWVNYLH 65

Query: 65  PGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           PGLKRGKMT QEERLVLELH KWGNR   +  + LP R
Sbjct: 66  PGLKRGKMTPQEERLVLELHAKWGNR-WSKIARKLPGR 95

[Close]

BLAST of CmoCh20G004650 vs. ExPASy Swiss-Prot
Match: Q9LX82 (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.0e-35
Identity = 74/102 (72.55%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWV 60
           M++ +  RKGPWTEQEDI L+ FV LFGDRRWDFIAKVSG       LNRTGKSCRLRWV
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSG-------LNRTGKSCRLRWV 60

Query: 61  NYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           NYLHPGLKRGKMT QEERLVLELH KWGNR   +  + LP R
Sbjct: 61  NYLHPGLKRGKMTPQEERLVLELHAKWGNR-WSKIARKLPGR 94

[Close]

BLAST of CmoCh20G004650 vs. ExPASy Swiss-Prot
Match: Q4JL76 (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 8.5e-35
Identity = 70/98 (71.43%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLH 64
           +EIRKGPWTEQED+QL+C V LFG+RRWDFIAKVSG       LNRTGKSCRLRWVNYLH
Sbjct: 6   EEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSG-------LNRTGKSCRLRWVNYLH 65

Query: 65  PGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           PGLKRG+M+  EERL+LELH +WGNR   R  + LP R
Sbjct: 66  PGLKRGRMSPHEERLILELHARWGNR-WSRIARRLPGR 95

[Close]

BLAST of CmoCh20G004650 vs. ExPASy Swiss-Prot
Match: Q53NK6 (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-33
Identity = 66/98 (67.35%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLH 64
           +E+RKGPWTEQED+QL+C V LFGDRRWDF+AKVSG       LNRTGKSCRLRWVNYLH
Sbjct: 6   EEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSG-------LNRTGKSCRLRWVNYLH 65

Query: 65  PGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           PGLK G+M+ +EE L++ELH +WGNR   R  + LP R
Sbjct: 66  PGLKHGRMSPKEEHLIIELHARWGNR-WSRIARRLPGR 95

[Close]

BLAST of CmoCh20G004650 vs. ExPASy Swiss-Prot
Match: Q10MB4 (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-23
Identity = 46/89 (51.69%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 2  VEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVN 61
          V G ++R+GPWT +ED+ L+ ++   G+ RW+ +A+ +GLK       RTGKSCRLRW+N
Sbjct: 15 VMGGDLRRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLK-------RTGKSCRLRWLN 74

Query: 62 YLHPGLKRGKMTAQEERLVLELHNKWGNR 91
          YL P L+RG +T QE+ L+LELH++WGNR
Sbjct: 75 YLRPDLRRGNITPQEQLLILELHSRWGNR 96

[Close]

BLAST of CmoCh20G004650 vs. ExPASy TrEMBL
Match: A0A0D6E290 (MYB48 OS=Lilium hybrid division I OX=156532 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.5e-42
Identity = 86/102 (84.31%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWV 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLK     LNRTGKSCRLRWV
Sbjct: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLK----GLNRTGKSCRLRWV 60

Query: 61  NYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           NYLHPGLKRGKMT QEERLVLELH KWGN S  +  + LP R
Sbjct: 61  NYLHPGLKRGKMTTQEERLVLELHAKWGNSSWSKIARKLPGR 98

[Close]

BLAST of CmoCh20G004650 vs. ExPASy TrEMBL
Match: A0A6J1JHY1 (transcription factor MYB59-like OS=Cucurbita maxima OX=3661 GN=LOC111484512 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.3e-41
Identity = 86/102 (84.31%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWV 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG       LNRTGKSCRLRWV
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------LNRTGKSCRLRWV 71

Query: 61  NYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           NYLHPGLKRGKMTAQEERLVLELHNKWGNR   +  + LP R
Sbjct: 72  NYLHPGLKRGKMTAQEERLVLELHNKWGNR-WSKIARKLPGR 105

[Close]

BLAST of CmoCh20G004650 vs. ExPASy TrEMBL
Match: A0A6J1FT29 (transcription factor MYB59-like OS=Cucurbita moschata OX=3662 GN=LOC111448512 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.3e-41
Identity = 86/102 (84.31%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWV 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG       LNRTGKSCRLRWV
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------LNRTGKSCRLRWV 71

Query: 61  NYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           NYLHPGLKRGKMTAQEERLVLELHNKWGNR   +  + LP R
Sbjct: 72  NYLHPGLKRGKMTAQEERLVLELHNKWGNR-WSKIARKLPGR 105

[Close]

BLAST of CmoCh20G004650 vs. ExPASy TrEMBL
Match: A0A1S3BIY1 (transcription factor MYB48-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490581 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-39
Identity = 84/102 (82.35%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWV 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG       LNRTGKSCRLRWV
Sbjct: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------LNRTGKSCRLRWV 60

Query: 61  NYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           NYLHPGLKRGKMT QEERLVLELH KWGNR   +  + LP R
Sbjct: 61  NYLHPGLKRGKMTTQEERLVLELHAKWGNR-WSKIARKLPGR 94

[Close]

BLAST of CmoCh20G004650 vs. ExPASy TrEMBL
Match: A0A218XXJ4 (transcription factor MYB59 isoform X3 OS=Punica granatum OX=22663 GN=LOC116200827 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.5e-39
Identity = 81/98 (82.65%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLH 64
           +E RKGPWTEQED+QL+CFVGLFGDRRWDFIAKVSGLKVAGD  NRTGKSCRLRWVNYLH
Sbjct: 6   EETRKGPWTEQEDLQLVCFVGLFGDRRWDFIAKVSGLKVAGDN-NRTGKSCRLRWVNYLH 65

Query: 65  PGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           P LKRGKMT QEERLVLELH+KWGNR   R  + LP R
Sbjct: 66  PDLKRGKMTPQEERLVLELHSKWGNR-WSRIARKLPGR 101

[Close]

BLAST of CmoCh20G004650 vs. NCBI nr
Match: CEP20211.1 (MYB48 [Lilium hybrid division I])

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-41
Identity = 86/102 (84.31%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWV 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLK     LNRTGKSCRLRWV
Sbjct: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLK----GLNRTGKSCRLRWV 60

Query: 61  NYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           NYLHPGLKRGKMT QEERLVLELH KWGN S  +  + LP R
Sbjct: 61  NYLHPGLKRGKMTTQEERLVLELHAKWGNSSWSKIARKLPGR 98

[Close]

BLAST of CmoCh20G004650 vs. NCBI nr
Match: XP_022986918.1 (transcription factor MYB59-like [Cucurbita maxima])

HSP 1 Score: 176.0 bits (445), Expect = 1.7e-40
Identity = 86/102 (84.31%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWV 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG       LNRTGKSCRLRWV
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------LNRTGKSCRLRWV 71

Query: 61  NYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           NYLHPGLKRGKMTAQEERLVLELHNKWGNR   +  + LP R
Sbjct: 72  NYLHPGLKRGKMTAQEERLVLELHNKWGNR-WSKIARKLPGR 105

[Close]

BLAST of CmoCh20G004650 vs. NCBI nr
Match: XP_023511995.1 (myb-related protein MYBAS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.0 bits (445), Expect = 1.7e-40
Identity = 86/102 (84.31%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWV 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG       LNRTGKSCRLRWV
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------LNRTGKSCRLRWV 71

Query: 61  NYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           NYLHPGLKRGKMTAQEERLVLELHNKWGNR   +  + LP R
Sbjct: 72  NYLHPGLKRGKMTAQEERLVLELHNKWGNR-WSKIARKLPGR 105

[Close]

BLAST of CmoCh20G004650 vs. NCBI nr
Match: XP_022943941.1 (transcription factor MYB59-like [Cucurbita moschata])

HSP 1 Score: 176.0 bits (445), Expect = 1.7e-40
Identity = 86/102 (84.31%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWV 60
           MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG       LNRTGKSCRLRWV
Sbjct: 12  MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSG-------LNRTGKSCRLRWV 71

Query: 61  NYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           NYLHPGLKRGKMTAQEERLVLELHNKWGNR   +  + LP R
Sbjct: 72  NYLHPGLKRGKMTAQEERLVLELHNKWGNR-WSKIARKLPGR 105

[Close]

BLAST of CmoCh20G004650 vs. NCBI nr
Match: XP_029128765.1 (transcription factor MYB48 [Cajanus cajan])

HSP 1 Score: 174.9 bits (442), Expect = 3.8e-40
Identity = 81/98 (82.65%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLH 64
           QE+RKGPWTEQED +L+ FVGLFGDRRWDFIAKVSGLKVAGD LNRTGKSCRLRWVNYLH
Sbjct: 4   QEVRKGPWTEQEDFKLVSFVGLFGDRRWDFIAKVSGLKVAGDSLNRTGKSCRLRWVNYLH 63

Query: 65  PGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           PGLKRGKMT QEERLVL+LH+KWGNR   R  + LP R
Sbjct: 64  PGLKRGKMTPQEERLVLDLHSKWGNR-WSRIARKLPGR 100

[Close]

BLAST of CmoCh20G004650 vs. TAIR 10
Match: AT5G59780.3 (myb domain protein 59 )

HSP 1 Score: 148.7 bits (374), Expect = 2.7e-36
Identity = 73/98 (74.49%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 5   QEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLH 64
           +E RKGPWTEQEDI L+ FV LFGDRRWDF+AKVSG       LNRTGKSCRLRWVNYLH
Sbjct: 6   EEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSG-------LNRTGKSCRLRWVNYLH 65

Query: 65  PGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           PGLKRGKMT QEERLVLELH KWGNR   +  + LP R
Sbjct: 66  PGLKRGKMTPQEERLVLELHAKWGNR-WSKIARKLPGR 95

[Close]

BLAST of CmoCh20G004650 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 148.3 bits (373), Expect = 3.6e-36
Identity = 74/102 (72.55%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 1   MVEGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWV 60
           M++ +  RKGPWTEQEDI L+ FV LFGDRRWDFIAKVSG       LNRTGKSCRLRWV
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSG-------LNRTGKSCRLRWV 60

Query: 61  NYLHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           NYLHPGLKRGKMT QEERLVLELH KWGNR   +  + LP R
Sbjct: 61  NYLHPGLKRGKMTPQEERLVLELHAKWGNR-WSKIARKLPGR 94

[Close]

BLAST of CmoCh20G004650 vs. TAIR 10
Match: AT2G47190.1 (myb domain protein 2 )

HSP 1 Score: 111.7 bits (278), Expect = 3.7e-25
Identity = 48/88 (54.55%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 3  EGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNY 62
          E  ++RKGPWTE+ED  L+ FV + GD RW+ IA+ SGLK       RTGKSCRLRW+NY
Sbjct: 16 EDSDVRKGPWTEEEDAILVNFVSIHGDARWNHIARSSGLK-------RTGKSCRLRWLNY 75

Query: 63 LHPGLKRGKMTAQEERLVLELHNKWGNR 91
          L P ++RG +T +E+ ++L+LH+ WGNR
Sbjct: 76 LRPDVRRGNITLEEQFMILKLHSLWGNR 96

[Close]

BLAST of CmoCh20G004650 vs. TAIR 10
Match: AT1G25340.1 (myb domain protein 116 )

HSP 1 Score: 109.4 bits (272), Expect = 1.8e-24
Identity = 54/100 (54.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 3   EGQEIRKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNY 62
           EG E RKGPWT +ED  L  ++   G+ RW+ +AK SGLK       R GKSCRLRW+NY
Sbjct: 14  EGAEQRKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLK-------RAGKSCRLRWLNY 73

Query: 63  LHPGLKRGKMTAQEERLVLELHNKWGNRSIPRTMKPLPSR 103
           L P +KRG +T QE+ L+LELH+KWGNR   +  K LP R
Sbjct: 74  LKPDIKRGNLTPQEQLLILELHSKWGNR-WSKISKYLPGR 105

[Close]

BLAST of CmoCh20G004650 vs. TAIR 10
Match: AT3G24310.1 (myb domain protein 305 )

HSP 1 Score: 107.8 bits (268), Expect = 5.3e-24
Identity = 49/83 (59.04%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 8  RKGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLKVAGDRLNRTGKSCRLRWVNYLHPGL 67
          RKGPWT +ED  LI +V L G+ RW+ +A+++GLK       R GKSCRLRWVNYL P L
Sbjct: 19 RKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLK-------RNGKSCRLRWVNYLRPDL 78

Query: 68 KRGKMTAQEERLVLELHNKWGNR 91
          KRG++T  EE ++LELH KWGNR
Sbjct: 79 KRGQITPHEETIILELHAKWGNR 94

The following BLAST results are available for this feature:

BLAST of CmoCh20G004650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4JL84	3.8e-35	74.49	Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2	[more]
Q9LX82	5.0e-35	72.55	Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1	[more]
Q4JL76	8.5e-35	71.43	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE...	[more]
Q53NK6	1.6e-33	67.35	Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS1 PE...	[more]
Q10MB4	2.6e-23	51.69	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]

BLAST of CmoCh20G004650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0D6E290	7.5e-42	84.31	MYB48 OS=Lilium hybrid division I OX=156532 PE=2 SV=1	[more]
A0A6J1JHY1	8.3e-41	84.31	transcription factor MYB59-like OS=Cucurbita maxima OX=3661 GN=LOC111484512 PE=4...	[more]
A0A6J1FT29	8.3e-41	84.31	transcription factor MYB59-like OS=Cucurbita moschata OX=3662 GN=LOC111448512 PE...	[more]
A0A1S3BIY1	2.0e-39	82.35	transcription factor MYB48-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034905...	[more]
A0A218XXJ4	3.5e-39	82.65	transcription factor MYB59 isoform X3 OS=Punica granatum OX=22663 GN=LOC11620082...	[more]

BLAST of CmoCh20G004650 vs. NCBI nr


Match Name	E-value	Identity	Description
CEP20211.1	1.5e-41	84.31	MYB48 [Lilium hybrid division I]	[more]
XP_022986918.1	1.7e-40	84.31	transcription factor MYB59-like [Cucurbita maxima]	[more]
XP_023511995.1	1.7e-40	84.31	myb-related protein MYBAS1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943941.1	1.7e-40	84.31	transcription factor MYB59-like [Cucurbita moschata]	[more]
XP_029128765.1	3.8e-40	82.65	transcription factor MYB48 [Cajanus cajan]	[more]

BLAST of CmoCh20G004650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59780.3	2.7e-36	74.49	myb domain protein 59	[more]
AT3G46130.1	3.6e-36	72.55	myb domain protein 48	[more]
AT2G47190.1	3.7e-25	54.55	myb domain protein 2	[more]
AT1G25340.1	1.8e-24	54.00	myb domain protein 116	[more]
AT3G24310.1	5.3e-24	59.04	myb domain protein 305	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..65 e-value: 1.8E-14 score: 64.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 4..63 score: 10.615142
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 11..63 e-value: 4.98309E-11 score: 51.4222
None	No IPR available	GENE3D	1.10.10.60		coord: 9..68 e-value: 4.3E-16 score: 60.6
None	No IPR available	PANTHER	PTHR45675:SF7	TRANSCRIPTION FACTOR MYB48-RELATED	coord: 5..91
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 9..63 e-value: 2.9E-14 score: 53.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 4..67 score: 22.264091
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 5..91
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 10..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G004650.1	CmoCh20G004650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding