CmoCh15G010310 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGGCGGAGGCGCCACTCCACCTCGACGGCGGCGGCGTTTTCTCTCTTCTTTCTTCCTAGTGATTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGTCACCAAGCCACCGCCGTCGCCAGACCGTTCCCTGGAAATCAAAAGCCAGAGCAAAGCGTTAGCGGTGGCGCCGGAAGCAAAGAGAAGCTGCTCCGGACGTATTTCAATGGAAGGAGTTTCGGTTCGAGAGGGTTTCAAGAGAAGAAACGAACAGTCCCCAGCTGCCCTGATCCTCTCCATAACTAG ATGAGCGGCGGAGGCGCCACTCCACCTCGACGGCGGCGGCGTTTTCTCTCTTCTTTCTTCCTAGTGATTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGTCACCAAGCCACCGCCGTCGCCAGACCGTTCCCTGGAAATCAAAAGCCAGAGCAAAGCGTTAGCGGTGGCGCCGGAAGCAAAGAGAAGCTGCTCCGGACGTATTTCAATGGAAGGAGTTTCGGTTCGAGAGGGTTTCAAGAGAAGAAACGAACAGTCCCCAGCTGCCCTGATCCTCTCCATAACTAG ATGAGCGGCGGAGGCGCCACTCCACCTCGACGGCGGCGGCGTTTTCTCTCTTCTTTCTTCCTAGTGATTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGTCACCAAGCCACCGCCGTCGCCAGACCGTTCCCTGGAAATCAAAAGCCAGAGCAAAGCGTTAGCGGTGGCGCCGGAAGCAAAGAGAAGCTGCTCCGGACGTATTTCAATGGAAGGAGTTTCGGTTCGAGAGGGTTTCAAGAGAAGAAACGAACAGTCCCCAGCTGCCCTGATCCTCTCCATAACTAG MSGGGATPPRRRRRFLSSFFLVIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN Homology
BLAST of CmoCh15G010310 vs. ExPASy Swiss-Prot
Match: Q9LUA1 (CLAVATA3/ESR (CLE)-related protein 27 OS=Arabidopsis thaliana OX=3702 GN=CLE27 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 5.3e-04 Identity = 27/90 (30.00%), Postives = 41/90 (45.56%), Query Frame = 0
BLAST of CmoCh15G010310 vs. ExPASy TrEMBL
Match: A0A5A7VDX3 (Putative Clavata3/esr-related 43 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00690 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 6.7e-18 Identity = 55/95 (57.89%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of CmoCh15G010310 vs. ExPASy TrEMBL
Match: A0A6A1W705 (CLAVATA3/ESR (CLE)-related protein 43 OS=Morella rubra OX=262757 GN=CJ030_MR3G018956 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.3e-09 Identity = 41/79 (51.90%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of CmoCh15G010310 vs. ExPASy TrEMBL
Match: A0A0A0KR66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609690 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.1e-07 Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 0
BLAST of CmoCh15G010310 vs. ExPASy TrEMBL
Match: A0A2N9G6I6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22693 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 7.7e-06 Identity = 38/83 (45.78%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of CmoCh15G010310 vs. ExPASy TrEMBL
Match: A0A061E6F8 (Clavata3/esr-related 43, putative OS=Theobroma cacao OX=3641 GN=TCM_009879 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.0e-05 Identity = 38/83 (45.78%), Postives = 45/83 (54.22%), Query Frame = 0
BLAST of CmoCh15G010310 vs. NCBI nr
Match: KAG6579278.1 (CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202.2 bits (513), Expect = 2.0e-48 Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of CmoCh15G010310 vs. NCBI nr
Match: KAG7016789.1 (hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 202.2 bits (513), Expect = 2.0e-48 Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of CmoCh15G010310 vs. NCBI nr
Match: KAG6601785.1 (CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032500.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 104.8 bits (260), Expect = 4.3e-19 Identity = 54/92 (58.70%), Postives = 62/92 (67.39%), Query Frame = 0
BLAST of CmoCh15G010310 vs. NCBI nr
Match: KAA0063931.1 (putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 1.4e-17 Identity = 55/95 (57.89%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of CmoCh15G010310 vs. NCBI nr
Match: KAB1221059.1 (CLAVATA3/ESR (CLE)-related protein 43 [Morella rubra]) HSP 1 Score: 70.9 bits (172), Expect = 6.9e-09 Identity = 41/79 (51.90%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of CmoCh15G010310 vs. TAIR 10
Match: AT3G25905.1 (CLAVATA3/ESR-RELATED 27 ) HSP 1 Score: 45.1 bits (105), Expect = 3.8e-05 Identity = 27/90 (30.00%), Postives = 41/90 (45.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|