CmoCh14G010650 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G010650
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	chaperone protein dnaJ 8, chloroplastic-like
Location	Cmo_Chr14: 5867267 .. 5868566 (+)
RNA-Seq Expression	CmoCh14G010650
Synteny	CmoCh14G010650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTCATTTTCTATTTATTCCCACCCTTCCTCGTTCCCCCCTTCCACTTTCACTCTCCCTCTCCCTCTCCCATCGGTTTCTTGTTCCTTCTTCTTGTTAATGGCGTCCGTTGCTACTGCTGGAATCTCCATCGCCCGGACTGGTTCTTCGTCCTCTTCGTCTTCGTTCTGGATCCGCCATAGAAATCGTTCCAACAAGGATAGGAGTTCTAGGAATCGAGTTAGGGTTACTTGTTCTTCTTCTCTGCTGGATCCTTATCAGACTCTTCGGATTCAACCTGGCGCCTCTGAATCTGAGGTCAAAAAGGCTTTTCGACGCCTCGCTCTTCAGGTTCCATTCCTTCCTTCCTTCCTTCCTTCCATTTCATCGTTTCTTCCTCACTCTGTTTTCTGATTGTTTCAATTTCGCCGGTTTTTCAGTATCATCCTGACGTTTGTAGAGGAAGTAATTGTGGCGTGCAGTTTCATCAAATCAATGAAGCTTACGATGTACGTGTTCATATTCCTGATTCATTACGTTTTCTTCCTTATATACTATGATTAGGATCAATTATTGGAATTCATTACGTTTGTAGAGGAAGTTATTGATTTTTTTTCCAAACACAATAACTAATTAAATTGAATGAAGAATTTGACTATTTTTTCGCGGTTCTTTTATTTGACCTTACAGCATGTGAAATAGAGTGTTTGTTCCATTTTTTTTAATGTACAATTTAGCCGTCTTTTTTACAATAGTGAAATGGATGTAACAATTAACCAAATTAAGTTTCTGGTGAAGCAGATTGTGATGAACAACTTGAGAGGTATATCGACACCAATAGAGACACGTGAATCGTGTGAGGAAGGGGTGGATGAAGAGATGAGAGGAATGGATGATCCTGATTGGGAGTTATGGGAAGAATGGATGGGATGGGAAGGAGCAGGAATTCGGGATTATTCCTCGCATATCAATCCCTACATTTAGAAGAAAATTAGGTAGCATTTCTGAATAGAAGAACCGTCGTTAAATCTGTCAACATCGGCCATTGTAATGGGAAAGGGCCATGGAAGACGGGAAAATCTCTTCCCTGTTTTCAAATGTTTTTGTACATAAGGTCAATAGTGGGCCTTCGGCTTTTAATAATGTGGAAAGGCTCTCAAGATGCCCTATCATAGTTGTGGTGGGGCATTTGTGTTTCATCTTCGTTGTTTTATCCATATATTTTAATTTCGAAGTTTATTGTCAATCAATCAGTCATATTCGTGTGTACTCGATCAATAACGACTTATACTAGAACATGAAAATACATTTACAATCAAAA

mRNA sequence

TATTCATTTTCTATTTATTCCCACCCTTCCTCGTTCCCCCCTTCCACTTTCACTCTCCCTCTCCCTCTCCCATCGGTTTCTTGTTCCTTCTTCTTGTTAATGGCGTCCGTTGCTACTGCTGGAATCTCCATCGCCCGGACTGGTTCTTCGTCCTCTTCGTCTTCGTTCTGGATCCGCCATAGAAATCGTTCCAACAAGGATAGGAGTTCTAGGAATCGAGTTAGGGTTACTTGTTCTTCTTCTCTGCTGGATCCTTATCAGACTCTTCGGATTCAACCTGGCGCCTCTGAATCTGAGGTCAAAAAGGCTTTTCGACGCCTCGCTCTTCAGTATCATCCTGACGTTTGTAGAGGAAGTAATTGTGGCGTGCAGTTTCATCAAATCAATGAAGCTTACGATATTGTGATGAACAACTTGAGAGGTATATCGACACCAATAGAGACACGTGAATCGTGTGAGGAAGGGGTGGATGAAGAGATGAGAGGAATGGATGATCCTGATTGGGAGTTATGGGAAGAATGGATGGGATGGGAAGGAGCAGGAATTCGGGATTATTCCTCGCATATCAATCCCTACATTTAGAAGAAAATTAGGTAGCATTTCTGAATAGAAGAACCGTCGTTAAATCTGTCAACATCGGCCATTGTAATGGGAAAGGGCCATGGAAGACGGGAAAATCTCTTCCCTGTTTTCAAATGTTTTTGTACATAAGGTCAATAGTGGGCCTTCGGCTTTTAATAATGTGGAAAGGCTCTCAAGATGCCCTATCATAGTTGTGGTGGGGCATTTGTGTTTCATCTTCGTTGTTTTATCCATATATTTTAATTTCGAAGTTTATTGTCAATCAATCAGTCATATTCGTGTGTACTCGATCAATAACGACTTATACTAGAACATGAAAATACATTTACAATCAAAA

Coding sequence (CDS)

ATGGCGTCCGTTGCTACTGCTGGAATCTCCATCGCCCGGACTGGTTCTTCGTCCTCTTCGTCTTCGTTCTGGATCCGCCATAGAAATCGTTCCAACAAGGATAGGAGTTCTAGGAATCGAGTTAGGGTTACTTGTTCTTCTTCTCTGCTGGATCCTTATCAGACTCTTCGGATTCAACCTGGCGCCTCTGAATCTGAGGTCAAAAAGGCTTTTCGACGCCTCGCTCTTCAGTATCATCCTGACGTTTGTAGAGGAAGTAATTGTGGCGTGCAGTTTCATCAAATCAATGAAGCTTACGATATTGTGATGAACAACTTGAGAGGTATATCGACACCAATAGAGACACGTGAATCGTGTGAGGAAGGGGTGGATGAAGAGATGAGAGGAATGGATGATCCTGATTGGGAGTTATGGGAAGAATGGATGGGATGGGAAGGAGCAGGAATTCGGGATTATTCCTCGCATATCAATCCCTACATTTAG

Protein sequence

MASVATAGISIARTGSSSSSSSFWIRHRNRSNKDRSSRNRVRVTCSSSLLDPYQTLRIQPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETRESCEEGVDEEMRGMDDPDWELWEEWMGWEGAGIRDYSSHINPYI

Homology

[Close]

BLAST of CmoCh14G010650 vs. ExPASy Swiss-Prot
Match: Q9SAG8 (Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ8 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.7e-42
Identity = 87/145 (60.00%), Postives = 109/145 (75.17%), Query Frame = 0


Query: 17  SSSSSSFWIRHRNRSNKDRSSRNRVRVTCSSSLLDPYQTLRIQPGASESEVKKAFRRLAL 76
           SSSSSSF +++  R N    +R++V  + SSS++DPY+TL+I+P +SE EVKKAFR+LA 
Sbjct: 21  SSSSSSFRLKNSRRKNTKMLNRSKVVCSSSSSVMDPYKTLKIRPDSSEYEVKKAFRQLAK 80

Query: 77  QYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETRESCE--EGVDEEMRGMDDPD 136
           +YHPDVCRGSNCGVQF  INEAYDIV   L+ I   +E  E  E  +  DE + GM+DPD
Sbjct: 81  KYHPDVCRGSNCGVQFQTINEAYDIV---LKQIKNQMEGTEEFEPFDVYDEGLNGMNDPD 140

Query: 137 WELWEEWMGWEGAGIRDYSSHINPY 160
            + WEEWMGWEGAG RDYSSH+NPY
Sbjct: 141 CDTWEEWMGWEGAGTRDYSSHVNPY 162

[Close]

BLAST of CmoCh14G010650 vs. ExPASy Swiss-Prot
Match: A7NS65 (Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) OX=383372 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-09
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 51  DPYQTLRIQPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIV 103
           D Y+ L +Q  AS+ E+KKAFRRLA QYHPDV +  +   +F +INEAY+++
Sbjct: 6   DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVL 57

[Close]

BLAST of CmoCh14G010650 vs. ExPASy Swiss-Prot
Match: A5UYW4 (Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-09
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 51  DPYQTLRIQPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIV 103
           D Y+ L +Q  AS+ E+KKAFRRLA QYHPDV +  +   +F +INEAY+++
Sbjct: 6   DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVL 57

[Close]

BLAST of CmoCh14G010650 vs. ExPASy Swiss-Prot
Match: O66921 (Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-09
Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 46  SSSLLDPYQTLRIQPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIV 103
           SS+  D Y+ L +   AS+ E+KKA+RRL  +YHPD+C+   C  +F +INEAY ++
Sbjct: 3   SSTKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEEKFKEINEAYQVL 59

[Close]

BLAST of CmoCh14G010650 vs. ExPASy Swiss-Prot
Match: Q65U54 (Chaperone protein DnaJ OS=Mannheimia succiniciproducens (strain MBEL55E) OX=221988 GN=dnaJ PE=3 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 9.2e-09
Identity = 26/55 (47.27%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 51  DPYQTLRIQPGASESEVKKAFRRLALQYHPDVCRGSNCGVQ-FHQINEAYDIVMN 105
           D Y+TL +Q GA E E+K+A++RLA++YHPD   G     + F ++NEAY+I+M+
Sbjct: 5   DYYETLGVQKGADEKEIKRAYKRLAMKYHPDRTNGDKAAEEKFKEVNEAYEILMD 59

[Close]

BLAST of CmoCh14G010650 vs. ExPASy TrEMBL
Match: A0A6J1F1M8 (chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441378 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 5.7e-86
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MASVATAGISIARTGSSSSSSSFWIRHRNRSNKDRSSRNRVRVTCSSSLLDPYQTLRIQP 60
           MASVATAGISIARTGSSSSSSSFWIRHRNRSNKDRSSRNRVRVTCSSSLLDPYQTLRIQP
Sbjct: 1   MASVATAGISIARTGSSSSSSSFWIRHRNRSNKDRSSRNRVRVTCSSSLLDPYQTLRIQP 60

Query: 61  GASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETRESCE 120
           GASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETRESCE
Sbjct: 61  GASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETRESCE 120

Query: 121 EGVDEEMRGMDDPDWELWEEWMGWEGAGIRDYSSHINPYI 161
           EGVDEEMRGMDDPDWELWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 EGVDEEMRGMDDPDWELWEEWMGWEGAGIRDYSSHINPYI 160

[Close]

BLAST of CmoCh14G010650 vs. ExPASy TrEMBL
Match: A0A6J1IYK7 (chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481844 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81
Identity = 155/160 (96.88%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MASVATAGISIARTGSSSSSSSFWIRHRNRSNKDRSSRNRVRVTCSSSLLDPYQTLRIQP 60
           MASVATAGISIARTG  SSSSSFWIRHRNRSNKDRSSRNRVRVTCSSSLLDPYQTLRIQP
Sbjct: 1   MASVATAGISIARTG--SSSSSFWIRHRNRSNKDRSSRNRVRVTCSSSLLDPYQTLRIQP 60

Query: 61  GASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETRESCE 120
           GASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIET ESCE
Sbjct: 61  GASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETCESCE 120

Query: 121 EGVDEEMRGMDDPDWELWEEWMGWEGAGIRDYSSHINPYI 161
           EGVDE MRGM+DPDWELWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 EGVDEAMRGMEDPDWELWEEWMGWEGAGIRDYSSHINPYI 158

[Close]

BLAST of CmoCh14G010650 vs. ExPASy TrEMBL
Match: A0A5D3DUL4 (Chaperone protein dnaJ 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold901G00100 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.0e-64
Identity = 132/163 (80.98%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   MASVATAGISIARTGSSSSSSSFWIRHRNRSNKDRSSRNRVRVTC--SSSLLDPYQTLRI 60
           MASVATAG  IAR+ SSSSSSS  IR+ NR  K+R+S N++RV+C  SSS+ DPY+TLRI
Sbjct: 1   MASVATAGF-IARSSSSSSSSS-CIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRI 60

Query: 61  QPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETRES 120
           QPGASESEVKKAFR LALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIET E+
Sbjct: 61  QPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYET 120

Query: 121 C-EEGVDEEMRGMDDPDWELWEEWMGWEGAGIRDYSSHINPYI 161
             +EG+DE MRGM DPDW+LWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 IYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161

[Close]

BLAST of CmoCh14G010650 vs. ExPASy TrEMBL
Match: A0A1S3CPN7 (chaperone protein dnaJ 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502812 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.0e-64
Identity = 132/163 (80.98%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   MASVATAGISIARTGSSSSSSSFWIRHRNRSNKDRSSRNRVRVTC--SSSLLDPYQTLRI 60
           MASVATAG  IAR+ SSSSSSS  IR+ NR  K+R+S N++RV+C  SSS+ DPY+TLRI
Sbjct: 1   MASVATAGF-IARSSSSSSSSS-CIRNTNRPKKNRTSSNQLRVSCSSSSSVADPYRTLRI 60

Query: 61  QPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETRES 120
           QPGASESEVKKAFR LALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIET E+
Sbjct: 61  QPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETYET 120

Query: 121 C-EEGVDEEMRGMDDPDWELWEEWMGWEGAGIRDYSSHINPYI 161
             +EG+DE MRGM DPDW+LWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 IYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161

[Close]

BLAST of CmoCh14G010650 vs. ExPASy TrEMBL
Match: A0A6J1DIS3 (chaperone protein dnaJ 8, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020908 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.3e-63
Identity = 128/164 (78.05%), Postives = 139/164 (84.76%), Query Frame = 0


Query: 1   MASVATAGISIARTGSSSSSSSFWIRHRNRSNKDRSSRNRVRVTCSSS----LLDPYQTL 60
           MAS ATAGI     G ++SSSS WIR RNR   DR+SRN +RV+CSSS    L DPYQTL
Sbjct: 1   MASAATAGI----LGRNASSSSSWIRQRNRQKNDRTSRNSLRVSCSSSSSSYLTDPYQTL 60

Query: 61  RIQPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETR 120
           RIQPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYD+VMNNLRGISTPIET 
Sbjct: 61  RIQPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDMVMNNLRGISTPIETY 120

Query: 121 ESCEEGVDEEMRGMDDPDWELWEEWMGWEGAGIRDYSSHINPYI 161
           +  E   +E MRGM+DPDW++WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 D--ESYAEEPMRGMEDPDWDMWEEWMGWEGAGIRDYSSHINPYI 158

[Close]

BLAST of CmoCh14G010650 vs. TAIR 10
Match: AT1G80920.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 2.6e-43
Identity = 87/145 (60.00%), Postives = 109/145 (75.17%), Query Frame = 0


Query: 17  SSSSSSFWIRHRNRSNKDRSSRNRVRVTCSSSLLDPYQTLRIQPGASESEVKKAFRRLAL 76
           SSSSSSF +++  R N    +R++V  + SSS++DPY+TL+I+P +SE EVKKAFR+LA 
Sbjct: 21  SSSSSSFRLKNSRRKNTKMLNRSKVVCSSSSSVMDPYKTLKIRPDSSEYEVKKAFRQLAK 80

Query: 77  QYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETRESCE--EGVDEEMRGMDDPD 136
           +YHPDVCRGSNCGVQF  INEAYDIV   L+ I   +E  E  E  +  DE + GM+DPD
Sbjct: 81  KYHPDVCRGSNCGVQFQTINEAYDIV---LKQIKNQMEGTEEFEPFDVYDEGLNGMNDPD 140

Query: 137 WELWEEWMGWEGAGIRDYSSHINPY 160
            + WEEWMGWEGAG RDYSSH+NPY
Sbjct: 141 CDTWEEWMGWEGAGTRDYSSHVNPY 162

[Close]

BLAST of CmoCh14G010650 vs. TAIR 10
Match: AT1G72070.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-12
Identity = 41/102 (40.20%), Postives = 56/102 (54.90%), Query Frame = 0


Query: 45  CSSSLLDPYQTLRIQPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHQINEAYDIVMN 104
           C S  L  Y  L + P AS++EVK+AF+RLAL+YHPDV +G +    F +I  AY+ +M 
Sbjct: 33  CLSPDLSHYTVLGLTPLASQTEVKRAFKRLALKYHPDVHKGQD--KDFKEIKSAYECLMQ 92

Query: 105 NLRGISTPIETRESCEEGVDEEMRGMDDPDWELWEEWMGWEG 147
             +     +E  E  E  +DE            WEEWMG+EG
Sbjct: 93  KFKKEEEEMEITEMGE--IDE------------WEEWMGFEG 118

[Close]

BLAST of CmoCh14G010650 vs. TAIR 10
Match: AT5G59610.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-11
Identity = 44/132 (33.33%), Postives = 74/132 (56.06%), Query Frame = 0


Query: 27  HRNRSNKDRSSRNRVRVTCSSSLLDPYQTLRIQPGASESEVKKAFRRLALQYHPDVCRGS 86
           ++ RS+  R  RNR+ VT + S   PY+ L + P A+  ++K+A+R+LAL+YHPDV + +
Sbjct: 52  YKRRSSIQR-RRNRIFVTRARS--SPYEILGVSPSATPQDIKRAYRKLALKYHPDVNKEA 111

Query: 87  NCGVQFHQINEAYDIVMNN-----------LRGISTPIETRESCEEGVDEEMRGMDDPDW 146
           N   +F +I  AY  ++N+             G ST   +R+   + V+E+  G+ D   
Sbjct: 112 NAQEKFLKIKHAYTTLINSDSRRKYGSDSRATGSSTGQTSRKGNSQ-VEEDFYGLGDFFK 171

Query: 147 ELWEEWMGWEGA 148
           +L EE+  WE +
Sbjct: 172 DLQEEYKNWEAS 179

[Close]

BLAST of CmoCh14G010650 vs. TAIR 10
Match: AT5G59610.2 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09
Identity = 31/79 (39.24%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 27  HRNRSNKDRSSRNRVRVTCSSSLLDPYQTLRIQPGASESEVKKAFRRLALQYHPDVCRGS 86
           ++ RS+  R  RNR+ VT + S   PY+ L + P A+  ++K+A+R+LAL+YHPDV + +
Sbjct: 52  YKRRSSIQR-RRNRIFVTRARS--SPYEILGVSPSATPQDIKRAYRKLALKYHPDVNKEA 111

Query: 87  NCGVQFHQINEAYDIVMNN 106
           N   +F +I  AY  ++N+
Sbjct: 112 NAQEKFLKIKHAYTTLINS 127

[Close]

BLAST of CmoCh14G010650 vs. TAIR 10
Match: AT1G77930.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-07
Identity = 34/109 (31.19%), Postives = 56/109 (51.38%), Query Frame = 0


Query: 17  SSSSSSFWIRHRNRSNKDRSSRNRVRVTCS--SSLLDPYQTLRIQPGASESEVKKAFRRL 76
           + SS+S W R +N +   R ++ +  V  S  S    PY TL +   A E ++K A+RRL
Sbjct: 40  NQSSNSSWFRSKNSNLWFRLNQRKTLVRASNWSQEKSPYDTLELDRNAEEEQIKVAYRRL 99

Query: 77  ALQYHPDVC-------RGSNCGVQFHQINEAYDIVMNNLRGISTPIETR 117
           A  YHPDV         G     +F +I  AY+++M++ + +   ++ R
Sbjct: 100 AKFYHPDVYDGKGTLEEGETAEARFIKIQAAYELLMDSEKKVQYDMDNR 148

The following BLAST results are available for this feature:

BLAST of CmoCh14G010650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAG8	3.7e-42	60.00	Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ8 ...	[more]
A7NS65	3.2e-09	51.92	Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) OX=...	[more]
A5UYW4	3.2e-09	51.92	Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=dnaJ PE=3 S...	[more]
O66921	4.1e-09	45.61	Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=...	[more]
Q65U54	9.2e-09	47.27	Chaperone protein DnaJ OS=Mannheimia succiniciproducens (strain MBEL55E) OX=2219...	[more]

BLAST of CmoCh14G010650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1M8	5.7e-86	100.00	chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1IYK7	1.1e-81	96.88	chaperone protein dnaJ 8, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5D3DUL4	8.0e-64	80.98	Chaperone protein dnaJ 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CPN7	8.0e-64	80.98	chaperone protein dnaJ 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502812 ...	[more]
A0A6J1DIS3	2.3e-63	78.05	chaperone protein dnaJ 8, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of CmoCh14G010650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80920.1	2.6e-43	60.00	Chaperone DnaJ-domain superfamily protein	[more]
AT1G72070.1	4.1e-12	40.20	Chaperone DnaJ-domain superfamily protein	[more]
AT5G59610.1	2.7e-11	33.33	Chaperone DnaJ-domain superfamily protein	[more]
AT5G59610.2	4.2e-09	39.24	Chaperone DnaJ-domain superfamily protein	[more]
AT1G77930.1	1.4e-07	31.19	Chaperone DnaJ-domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 87..107 score: 23.18 coord: 53..71 score: 39.76 coord: 71..86 score: 45.48
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 50..107 e-value: 7.7E-19 score: 78.6
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 51..104 e-value: 2.3E-15 score: 56.5
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 51..107 score: 13.678316
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 51..101 e-value: 8.15235E-18 score: 70.6521
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 25..108 e-value: 1.4E-18 score: 68.6
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 26..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..39
None	No IPR available	PANTHER	PTHR24074	CO-CHAPERONE PROTEIN DJLA	coord: 13..160
None	No IPR available	PANTHER	PTHR24074:SF37	HEAT SHOCK PROTEIN BINDING PROTEIN	coord: 13..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G010650.1	CmoCh14G010650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005634	nucleus