CmoCh13G004310 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G004310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr13: 5348295 .. 5348897 (+)
RNA-Seq Expression	CmoCh13G004310
Synteny	CmoCh13G004310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGCTCTACCGGAGAAGAGGAACGGTCCACCCATCGCCGCCGATCATCTCCGACCATCTCTCCTTTCTCCCCACTGCCATCCTCACCCTCGCGGCGGCGCTTTCACCGGAGGATCGAGAGATCTTAGCCTACCTCATCTCCTCCTTCTCCAACGACTTCACCACCGTCAACAACTTCTCCGGCCACCGCGGCAAGGCGGCCCACCAGAAACCCGCCGCCGCAAAGAGCGGTTCCGATCACCCTCCAGTTTTCTCCTGCGACTGTTTCCGGTGCTACACTAGCTACTGGGTGAGATGGGATTCCTCACCAAATCGGCAAATGATACACGAAATCATCGATGCTTATGAAGAAACATTGGCCGAGAGTAAAGCCGGCAAGAACAATAAGAAAGAGAGGAAGAAGAGGAACACCGGGTCCGGATCCGGGTCGGTTTCCAGTCCGGGTGATGGGAAGGGGTCCGAACTCGCCCCGAAGGTGGAAGAGTCGAGGGTGACGGAGATGGAGGCGGCGGATGGCGGCGAGAATGAGGCGGAGAAAGGGTCGGTGAGGTGGATTGTGAGTTACATAGGGGAAAAAATCTGGGGAGGTTGGAATTAG

mRNA sequence

ATGAAGAAGCTCTACCGGAGAAGAGGAACGGTCCACCCATCGCCGCCGATCATCTCCGACCATCTCTCCTTTCTCCCCACTGCCATCCTCACCCTCGCGGCGGCGCTTTCACCGGAGGATCGAGAGATCTTAGCCTACCTCATCTCCTCCTTCTCCAACGACTTCACCACCGTCAACAACTTCTCCGGCCACCGCGGCAAGGCGGCCCACCAGAAACCCGCCGCCGCAAAGAGCGGTTCCGATCACCCTCCAGTTTTCTCCTGCGACTGTTTCCGGTGCTACACTAGCTACTGGGTGAGATGGGATTCCTCACCAAATCGGCAAATGATACACGAAATCATCGATGCTTATGAAGAAACATTGGCCGAGAGTAAAGCCGGCAAGAACAATAAGAAAGAGAGGAAGAAGAGGAACACCGGGTCCGGATCCGGGTCGGTTTCCAGTCCGGGTGATGGGAAGGGGTCCGAACTCGCCCCGAAGGTGGAAGAGTCGAGGGTGACGGAGATGGAGGCGGCGGATGGCGGCGAGAATGAGGCGGAGAAAGGGTCGGTGAGGTGGATTGTGAGTTACATAGGGGAAAAAATCTGGGGAGGTTGGAATTAG

Coding sequence (CDS)

ATGAAGAAGCTCTACCGGAGAAGAGGAACGGTCCACCCATCGCCGCCGATCATCTCCGACCATCTCTCCTTTCTCCCCACTGCCATCCTCACCCTCGCGGCGGCGCTTTCACCGGAGGATCGAGAGATCTTAGCCTACCTCATCTCCTCCTTCTCCAACGACTTCACCACCGTCAACAACTTCTCCGGCCACCGCGGCAAGGCGGCCCACCAGAAACCCGCCGCCGCAAAGAGCGGTTCCGATCACCCTCCAGTTTTCTCCTGCGACTGTTTCCGGTGCTACACTAGCTACTGGGTGAGATGGGATTCCTCACCAAATCGGCAAATGATACACGAAATCATCGATGCTTATGAAGAAACATTGGCCGAGAGTAAAGCCGGCAAGAACAATAAGAAAGAGAGGAAGAAGAGGAACACCGGGTCCGGATCCGGGTCGGTTTCCAGTCCGGGTGATGGGAAGGGGTCCGAACTCGCCCCGAAGGTGGAAGAGTCGAGGGTGACGGAGATGGAGGCGGCGGATGGCGGCGAGAATGAGGCGGAGAAAGGGTCGGTGAGGTGGATTGTGAGTTACATAGGGGAAAAAATCTGGGGAGGTTGGAATTAG

Protein sequence

MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNNFSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEETLAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAEKGSVRWIVSYIGEKIWGGWN

Homology

[Close]

BLAST of CmoCh13G004310 vs. ExPASy TrEMBL
Match: A0A6J1ENT0 (uncharacterized protein LOC111434229 OS=Cucurbita moschata OX=3662 GN=LOC111434229 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.7e-109
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN
Sbjct: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60

Query: 61  FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET 120
           FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET
Sbjct: 61  FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET 120

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAE 180
           LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAE
Sbjct: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAE 180

Query: 181 KGSVRWIVSYIGEKIWGGWN 201
           KGSVRWIVSYIGEKIWGGWN
Sbjct: 181 KGSVRWIVSYIGEKIWGGWN 200

[Close]

BLAST of CmoCh13G004310 vs. ExPASy TrEMBL
Match: A0A6J1KLN6 (uncharacterized protein LOC111495687 OS=Cucurbita maxima OX=3661 GN=LOC111495687 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103
Identity = 193/203 (95.07%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           M KLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN
Sbjct: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60

Query: 61  FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET 120
           FSGHRGKAA QKPAAAKSGSDHPP FSCDCFRCYTSYWVRWDSSPNRQ+IHEIIDAYEET
Sbjct: 61  FSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAYEET 120

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAAD---GGEN 180
           LAESKAGKNNKKERKKRNTGSGSGSVSS GDGKGSELAPKVEESRVTEMEAAD   GGEN
Sbjct: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSQGDGKGSELAPKVEESRVTEMEAADGGGGGEN 180

Query: 181 EAEKGSVRWIVSYIGEKIWGGWN 201
           EAEKG+VRWIV YIGEKIWGGWN
Sbjct: 181 EAEKGTVRWIVRYIGEKIWGGWN 203

[Close]

BLAST of CmoCh13G004310 vs. ExPASy TrEMBL
Match: A0A0A0LVV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G196260 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.4e-78
Identity = 156/200 (78.00%), Postives = 163/200 (81.50%), Query Frame = 0


Query: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           MKKLYR+RGTVHPSP IISDHLSFLPT ILTLAAALS  DRE+LAYLISS SNDFT V N
Sbjct: 124 MKKLYRKRGTVHPSPLIISDHLSFLPTVILTLAAALSLHDREVLAYLISSCSNDFTAVIN 183

Query: 61  FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET 120
            S HRGKA HQK AAA  G DHPP FSC CF+CYTSYWVRWDSSPNRQ+IHEIIDAYEE 
Sbjct: 184 SSSHRGKATHQKHAAAMGGLDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEEK 243

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAE 180
           LAESK GKNNKKERKKRN     G VS PG+GKGSE A K EE RVTE E A+GGE  AE
Sbjct: 244 LAESKVGKNNKKERKKRN---NRGPVSGPGEGKGSEAATKEEEWRVTEREVAEGGEEGAE 303

Query: 181 KGSVRWIVSYIGEKIWGGWN 201
           KG VR IVS +GEKIWG WN
Sbjct: 304 KGPVRRIVSLLGEKIWGSWN 320

[Close]

BLAST of CmoCh13G004310 vs. ExPASy TrEMBL
Match: A0A5D3CKA3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001180 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.6e-77
Identity = 151/200 (75.50%), Postives = 169/200 (84.50%), Query Frame = 0


Query: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           MKKLYR+ GTVHPSPP+ISDHLSFLPTAILTL++ALS +DRE+LAYLISS SNDFT V+N
Sbjct: 1   MKKLYRKTGTVHPSPPLISDHLSFLPTAILTLSSALSLQDREVLAYLISSCSNDFTPVHN 60

Query: 61  FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET 120
            S HRGKAAH K AA  +GSDHPP FSC CF+CYTSYWVRWDSSPNRQ+IHEIIDAYE+ 
Sbjct: 61  SSTHRGKAAHHKHAAPMAGSDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEDK 120

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAE 180
           LAE+K GKNNKKERKKRN+   SG+VS PG+GKG+E A KVEE +VTE     GGE EAE
Sbjct: 121 LAETKVGKNNKKERKKRNS---SGTVSGPGEGKGAEAAAKVEEWKVTE-----GGEEEAE 180

Query: 181 KGSVRWIVSYIGEKIWGGWN 201
           KG VR IVS +GEKIWG WN
Sbjct: 181 KGPVRRIVSLLGEKIWGSWN 192

[Close]

BLAST of CmoCh13G004310 vs. ExPASy TrEMBL
Match: A0A1S3C9P0 (uncharacterized protein LOC103498228 OS=Cucumis melo OX=3656 GN=LOC103498228 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.6e-77
Identity = 151/200 (75.50%), Postives = 169/200 (84.50%), Query Frame = 0


Query: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           MKKLYR+ GTVHPSPP+ISDHLSFLPTAILTL++ALS +DRE+LAYLISS SNDFT V+N
Sbjct: 1   MKKLYRKTGTVHPSPPLISDHLSFLPTAILTLSSALSLQDREVLAYLISSCSNDFTPVHN 60

Query: 61  FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET 120
            S HRGKAAH K AA  +GSDHPP FSC CF+CYTSYWVRWDSSPNRQ+IHEIIDAYE+ 
Sbjct: 61  SSTHRGKAAHHKHAAPMAGSDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEDK 120

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAE 180
           LAE+K GKNNKKERKKRN+   SG+VS PG+GKG+E A KVEE +VTE     GGE EAE
Sbjct: 121 LAETKVGKNNKKERKKRNS---SGTVSGPGEGKGAEAAAKVEEWKVTE-----GGEEEAE 180

Query: 181 KGSVRWIVSYIGEKIWGGWN 201
           KG VR IVS +GEKIWG WN
Sbjct: 181 KGPVRRIVSLLGEKIWGSWN 192

[Close]

BLAST of CmoCh13G004310 vs. NCBI nr
Match: XP_022927395.1 (uncharacterized protein LOC111434229 [Cucurbita moschata] >KAG6583763.1 hypothetical protein SDJN03_19695, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 404.4 bits (1038), Expect = 5.5e-109
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN
Sbjct: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60

Query: 61  FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET 120
           FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET
Sbjct: 61  FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET 120

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAE 180
           LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAE
Sbjct: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAE 180

Query: 181 KGSVRWIVSYIGEKIWGGWN 201
           KGSVRWIVSYIGEKIWGGWN
Sbjct: 181 KGSVRWIVSYIGEKIWGGWN 200

[Close]

BLAST of CmoCh13G004310 vs. NCBI nr
Match: KAG7019402.1 (hypothetical protein SDJN02_18363, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.1 bits (1032), Expect = 2.7e-108
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN
Sbjct: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60

Query: 61  FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET 120
           FS HRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET
Sbjct: 61  FSSHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET 120

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAE 180
           LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAE
Sbjct: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEAE 180

Query: 181 KGSVRWIVSYIGEKIWGGWN 201
           KGSVRWIVSYIGEKIWGGWN
Sbjct: 181 KGSVRWIVSYIGEKIWGGWN 200

[Close]

BLAST of CmoCh13G004310 vs. NCBI nr
Match: XP_023520004.1 (uncharacterized protein LOC111783314 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.3 bits (1004), Expect = 4.8e-105
Identity = 195/203 (96.06%), Postives = 200/203 (98.52%), Query Frame = 0


Query: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN
Sbjct: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60

Query: 61  FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET 120
           FSGHRGKAAHQKPAAA+SGSDHPPVFSC+CFRCYTSYWVRWDSSPNRQ+IHEIIDAYEET
Sbjct: 61  FSGHRGKAAHQKPAAARSGSDHPPVFSCNCFRCYTSYWVRWDSSPNRQIIHEIIDAYEET 120

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAAD---GGEN 180
           LAESKAGKN+KKERKKRNTGSGSGSVSSPGDGKGSE+APKVEESRVTEMEAAD   GGEN
Sbjct: 121 LAESKAGKNSKKERKKRNTGSGSGSVSSPGDGKGSEVAPKVEESRVTEMEAADGGGGGEN 180

Query: 181 EAEKGSVRWIVSYIGEKIWGGWN 201
           EAEKGSVRWIVSYIGEKIWGGWN
Sbjct: 181 EAEKGSVRWIVSYIGEKIWGGWN 203

[Close]

BLAST of CmoCh13G004310 vs. NCBI nr
Match: XP_023001610.1 (uncharacterized protein LOC111495687 [Cucurbita maxima])

HSP 1 Score: 384.8 bits (987), Expect = 4.5e-103
Identity = 193/203 (95.07%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           M KLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN
Sbjct: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60

Query: 61  FSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEET 120
           FSGHRGKAA QKPAAAKSGSDHPP FSCDCFRCYTSYWVRWDSSPNRQ+IHEIIDAYEET
Sbjct: 61  FSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAYEET 120

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAAD---GGEN 180
           LAESKAGKNNKKERKKRNTGSGSGSVSS GDGKGSELAPKVEESRVTEMEAAD   GGEN
Sbjct: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSQGDGKGSELAPKVEESRVTEMEAADGGGGGEN 180

Query: 181 EAEKGSVRWIVSYIGEKIWGGWN 201
           EAEKG+VRWIV YIGEKIWGGWN
Sbjct: 181 EAEKGTVRWIVRYIGEKIWGGWN 203

[Close]

BLAST of CmoCh13G004310 vs. NCBI nr
Match: XP_038894832.1 (uncharacterized protein LOC120083238 [Benincasa hispida])

HSP 1 Score: 326.2 bits (835), Expect = 1.9e-85
Identity = 168/201 (83.58%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   MKKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           MKKLYR+RGTVHPSPPIISDHLSFLPTAILTLAAALS EDRE+LAYLISS SNDFT VNN
Sbjct: 74  MKKLYRKRGTVHPSPPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNDFTAVNN 133

Query: 61  FSGHRGKAAHQK-PAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEE 120
            S HRGKAAHQK PAAAK GSDHPP FSCDCFRCYTSYWVRWDSSPNRQ+IHEIIDAYEE
Sbjct: 134 RSNHRGKAAHQKPPAAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 193

Query: 121 TLAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAADGGENEA 180
            LAESKAGKNNKKERKKRN    SG VS PG+GK SE A + EE RVTE EAA+GGE E 
Sbjct: 194 KLAESKAGKNNKKERKKRN----SGPVSGPGEGKRSEPAAEEEELRVTEREAAEGGEEET 253

Query: 181 EKGSVRWIVSYIGEKIWGGWN 201
           EKGSVR IVS+IGE+IWG WN
Sbjct: 254 EKGSVRRIVSFIGERIWGSWN 270

[Close]

BLAST of CmoCh13G004310 vs. TAIR 10
Match: AT1G12020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 162.5 bits (410), Expect = 3.4e-40
Identity = 110/234 (47.01%), Postives = 138/234 (58.97%), Query Frame = 0


Query: 1   MKKLYRRRGTVHPSPPII--SDH-LSFLPTAILTLAAALSPEDREILAYLISSFSNDFTT 60
           MKKLY R+GTVHPSPP I  +DH L+ LP AI +LAA LSPEDRE+LAYLIS+ S     
Sbjct: 1   MKKLY-RKGTVHPSPPQIKSNDHLLTLLPVAIFSLAAVLSPEDREVLAYLISTAS----- 60

Query: 61  VNNFSGHRGKAAH-QKPAAAKSG--SDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEII 120
              +SG R   +   K  A K     +H P+F CDCF CYTSYWVRWDSSP+RQ+IHEII
Sbjct: 61  ---YSGERNPTSRLNKTKAHKKALFDNHSPLFHCDCFSCYTSYWVRWDSSPSRQLIHEII 120

Query: 121 DAYEETLAESKAGKNN---KKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEA 180
           DA+E++L ++K  K N   KK+R+KR+  S S   SS      SE+  ++ ES V     
Sbjct: 121 DAFEDSLEKNKNKKKNVTGKKDRRKRSGKSSSLLASSSFSTDDSEIPSRLGESVVNSCPC 180

Query: 181 A-------DGG-------------------ENEAEKGSVRWIVSYIGEKIWGGW 200
                   DGG                   + E EKG+VR  VS+IGEK++G W
Sbjct: 181 TSSSELTQDGGGCSGGLEPMEFFCAGDACEKVEEEKGTVRRFVSFIGEKVFGVW 225

[Close]

BLAST of CmoCh13G004310 vs. TAIR 10
Match: AT1G62422.1 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 153.7 bits (387), Expect = 1.6e-37
Identity = 102/206 (49.51%), Postives = 126/206 (61.17%), Query Frame = 0


Query: 1   MKKLYRRRGTVHPSPP--IISDH--LSFLPTAILTLAAALSPEDREILAYLISSFSNDFT 60
           MKKL  R+GTVHPSPP  I +D   LS LP AIL+L AALS EDRE+LAYLIS+      
Sbjct: 1   MKKLC-RKGTVHPSPPPAIKTDEQFLSLLPVAILSLVAALSVEDREVLAYLISN------ 60

Query: 61  TVNNFSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDA 120
                SG   + +  K    K  + H P+F CDCF CYTSYWVRWD+SP RQ+IHEIIDA
Sbjct: 61  -----SGDSNRISRLK--KNKEDNHHSPLFLCDCFSCYTSYWVRWDTSPRRQLIHEIIDA 120

Query: 121 YEETLAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEA---AD 180
           YE++L      K  KK+R+KR +G  SG V+S G  + SEL     E    + E      
Sbjct: 121 YEDSLEM----KKKKKDRRKR-SGKASGRVNSIGTSRLSELGSSSAEFAGGDSEKDGNCG 180

Query: 181 GGENEAEKGSVRWIVSYIGEKIWGGW 200
           G E E EKGSV  ++S+IG++  G W
Sbjct: 181 GEEAEKEKGSVGKVMSFIGQRFLGVW 187

[Close]

BLAST of CmoCh13G004310 vs. TAIR 10
Match: AT5G13090.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 105.5 bits (262), Expect = 4.9e-23
Identity = 69/193 (35.75%), Postives = 100/193 (51.81%), Query Frame = 0


Query: 6   RRRGTVHPSPP---------IISDHLS-----------FLPTAILTLAAALSPEDREILA 65
           +++G V+PSPP           S+HL+            LP  IL L + LS E+RE+LA
Sbjct: 4   KKKGKVYPSPPPPPQSSSSSSSSNHLNEEDDDSLSVLKLLPATILVLVSVLSSEEREVLA 63

Query: 66  YLISSFSNDFTTVNNFSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSP 125
           YLI+      TT+++      K   +K +   S +  PPVF C+CF CYT+YW RWDSSP
Sbjct: 64  YLITR----GTTISDRGNSSSKNKTKKKSNKSSKNHKPPVFDCECFDCYTNYWFRWDSSP 123

Query: 126 NRQMIHEIIDAYEETLAESKAGKNNKKERKKRNTGSG---SGSVSSP-------GDGKGS 169
           NR++IHEII+A+E    E  +   +K +R K+    G   + S S P       GD    
Sbjct: 124 NRELIHEIIEAFENHHGEENSASRSKSKRGKKKEKPGRRVTDSDSKPALRVTDNGDKDSK 183

[Close]

BLAST of CmoCh13G004310 vs. TAIR 10
Match: AT1G24270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.7 bits (234), Expect = 8.7e-20
Identity = 59/145 (40.69%), Postives = 77/145 (53.10%), Query Frame = 0


Query: 7   RRGTVHPSPPIIS-------DHLS---FLPTAILTLAAALSPEDREILAYLISSFSNDFT 66
           ++G VHPSPP+ S       D LS    L +AIL L + LS ED E+LAYLI+   N   
Sbjct: 59  KKGKVHPSPPLPSSSSSNGDDSLSVFKLLQSAILVLVSVLSAEDLEVLAYLITRSLNTTN 118

Query: 67  TVNNFSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDA 126
            V               +  K  S   P+  C CF CYTSYW +WDSS NR++I++II+A
Sbjct: 119 VV---------------SCKKKRSHKAPLLDCQCFDCYTSYWSKWDSSSNRELINQIIEA 178

Query: 127 YEETL-----AESKAGKNNKKERKK 137
           +E+ L     + S   K NKK  KK
Sbjct: 179 FEDHLTRDEISASHTSKKNKKRAKK 188

The following BLAST results are available for this feature:

BLAST of CmoCh13G004310 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh13G004310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENT0	2.7e-109	100.00	uncharacterized protein LOC111434229 OS=Cucurbita moschata OX=3662 GN=LOC1114342...	[more]
A0A6J1KLN6	2.2e-103	95.07	uncharacterized protein LOC111495687 OS=Cucurbita maxima OX=3661 GN=LOC111495687...	[more]
A0A0A0LVV3	2.4e-78	78.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G196260 PE=4 SV=1	[more]
A0A5D3CKA3	4.6e-77	75.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C9P0	4.6e-77	75.50	uncharacterized protein LOC103498228 OS=Cucumis melo OX=3656 GN=LOC103498228 PE=...	[more]

BLAST of CmoCh13G004310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927395.1	5.5e-109	100.00	uncharacterized protein LOC111434229 [Cucurbita moschata] >KAG6583763.1 hypothet...	[more]
KAG7019402.1	2.7e-108	99.50	hypothetical protein SDJN02_18363, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023520004.1	4.8e-105	96.06	uncharacterized protein LOC111783314 [Cucurbita pepo subsp. pepo]	[more]
XP_023001610.1	4.5e-103	95.07	uncharacterized protein LOC111495687 [Cucurbita maxima]	[more]
XP_038894832.1	1.9e-85	83.58	uncharacterized protein LOC120083238 [Benincasa hispida]	[more]

BLAST of CmoCh13G004310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12020.1	3.4e-40	47.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G62422.1	1.6e-37	49.51	unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth ...	[more]
AT5G13090.1	4.9e-23	35.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G24270.1	8.7e-20	40.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..180
None	No IPR available	PANTHER	PTHR31903	F12F1.11-RELATED	coord: 1..200
None	No IPR available	PANTHER	PTHR31903:SF6	F12F1.11-RELATED	coord: 1..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G004310.1	CmoCh13G004310.1	mRNA