Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAATAATTTACACATAAAATAATCGATAGTTTAATAATTTCATCGATTTTGTTGGCCTTTTGCTTGGATTTGGCGGTTCTTCGGAGATGGTGAAATCTTCGGTCTTCGTTGTGTAATCTTGTACTCTTCCTTCCTCCCACCGTCGCCCCCAATTCAATTCAGTTCGGCCTGTTTCCGCCGTAGAGCGACGGAGGGAAGCTGATGTTGACGCGTAGAATTCCTTCCGTGGCAGTTTATCTCCCGCAAGCTCTGCCATGGCGTCGTGGGCTACCTCATTCAATCAACACCAGGACGCCGCTTGAATTCCACTCATTGCTCTCTTTTTGCCCTAAAACTTGTTTACTTTCCTTTTGTTCCGCTTCACAATTCTCCTCCGAAGTTGCTGAACCAACTCATCTGGATGATTCCTCGAAGCGTGTAAGATCACGAACCAATCCCTTCCTTATAACTTTTTCTATATGGCCATTGTTAATCATGCAAAACCTAGAGCTTAATTCCTGTTATTTATTTGCTTAACTCTTTCCTTGTGGCTAGAATGAACATAGAATGAACCGCAAAAGCTCAATGTGTGTTAATGGTATGTTTAATCTTTATATATATTCTTAACAGTAATGTTTTGCCTCTCCATGTTGATACTTGTATTGGATTCAACTACAAAACTTGCTATATCTGTCTCATTTTGTACTGGATTGTATACAAGTTATTGTAACTTCTTAAGTCCTTTAATGAAAATATAGATATATTCTGTCCGCTTTCTTGGTTTAGGATTTCTACGTAGTTTTGTAATGTTTGACAGGTATCCTTGTCCTTGCAGGGTCCCCTGAAACCTGGGTTATATATAGTTAGCACACCAATTGGTAATCTTGAAGATATCACCTTACGGTATGAAATTTTGATAGCAAGCCCCAACATTAATATTGTAAGATCCCATATCGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAATCTCTCCCTAGTAGACGCGTTTTAAAATCGTGAGGCTGATGACAATACGTAACAGACTAAAGTGGACAATATCTGTTAGCGGTGAGCTTAAGCTGTTATAAATGGTATTAGAGCCAGACATTGGGCAGTGTGCCAGCGAGGATGTTGGGGCCCGAAGGAAGGTGGATTGTGAGATCCCACGTCGGTTGGAAAGGGGAACGAAACATTCCTTGTAAGGGTGTGGAAACCTCTCCCTAGTAGACATGTTTTGAAATCATGAAGCTAACGACGATATGTATAGAAGGCCAAAGCGGACAAAATCTGTTACTTTCTTTTCAACGTATGTATGTATACACTGAAAGTTTGGCAACCAACACGAATATATATATATTTTTTCTTTCAAAATGATATGTACACATATAAACGCATGATTTGGAAAATGGACTTTATGTCTTGTGATATTTCTAACTGAGTCACTACCTTAAGTAGGATGTTAATTTCCATGTTTCAAGATTTTTGCATTTATATTGTTCCTTATTTCAATTGTTCAGTTCTTTTGAATAATCAGTCTCTTTATGCCCTTAAAATTCTATTATACAGTGCTCTACGTGTCTTAAAATCAGCAAACGTCATTCTTTCGGAGGATACAAGGCACTCAGGAAAGTTGCTTCAACATTTCAGTATTAAAACCCCTCTTGTAAGTTTGTTGATGCATTTGTTTGCTGATATATCAGTTTTCTTTTCGTTCTCCATTTGTTCTGATGAAGACTTTTAGATTTCAGTTGAGTTTTCACAAATTCAATGAGTCTCAAAGGGAGCAAACAGTTTTGAAGAGGTTAAAAGAGGGTGAAATTGTTGCACTAATTAGTGACGCGGGGACTCCAGGCATTAGTGATCCTGGTACTGAGTTGGTGAGCATGCTCGTTCTTCCTTAATATTTTAATGATTTAATTATGAATGGTGGTATTTATATAATTGTACCATGTGAATACAGGTAAGACAATGTGTCAATGCAAGCATACCCGTTGTTCCTATTCCTGGACCCTCTGCTGTCATTGCTGCTCTTTCTGCCTCTGGCTTGTCGACCGATGAATTTACCTTCGGTAAAATTTGTACCGGTTCTTGTACTTGTGCTGTGAGGGCACCTTTGTTTGAGATTTTTTGGCCCTTTGGCTATGGCTTCCTTCAGGCTCACAACAGTTTCTCAATAAGTAAATTTGTGCAGTTGGATTTGTTCCTAAGCATGCTGCATCTAGAAGAGAGAGGCTGATGGTTTCAGCAAATGAGGAGGCGACGCAAATATTCTATGTTCCTCCGCACAAAGTTAAGCAGTTTCTCGAGGAAACTTCATCATTATTTGGTGAATCAAGGTACTTCATATATGTCTATCTCTAATCTGTTAACTTATATGTAATAGTCCAAGCCCACTGCTAGTAGATATTGTCCTCTTTGAGCTTTCCCTTTCGGGCTTCCCCTCAAGATTTTTAAAACGCGTCTGTTAGGAAGAGGTTTCCACACCCTTATAAAGAATAATTCGTTTCCGTCTCCAACTGACGTGGGATCTCCCAATCCCACCCTCCTTCGAGGCCCAGCGTCTTCACTGGCACTCGTTCCTCTCTCCAATCGATGTGGGATCTTACATTATATTTCTTCCAATGTATCAGTGCAGTTCACCACTATCTGCTTCTATCTATATCATTCATTTACTGATGACATCTGATTTGGAATATTTGAAGGAACAGATTGTATTAAGATGCTTCGTTAATCGTGATATCTTAAAGCAATCATTTCATTTCTTGTAACAGATAGTCTAAACTTATATTATGATCCAAATTACTTTACTGAACAAGCAGACTTGTCTTCTGTTTGTAGATGGTTTCATCAATGCCAACTTGATGAGTATTTTTGTTTCTGAGCTGTTTTGCAGGCAATGCGTCATAGCTCGTGAAATGACCAAGATACACGAGGAGGTAACTTTATTCCTCACCATGTTTTTTTGTATCTTTATTTGGTAGAGTTCCCAATACTTATGCTTACTGCCGACCACTTCTTTGTTTCTTCTGCACACTGTTACTTATTTACCTTGTATGATGTCATTCTACCAATTTCCTCTGTGCTCTATTGAGTTCCTTGGTTGCAACAGTTTTGGCGGGGTACCCTGGCGGAAGCTAAAGAATACTTCTCGTTGCACCAAACGAAGGGTGAAATTACGCTGCTGATCGAAGGAAAGCTCAATTCTGAAGTTGAAACTCCATCGGAATCACAGCTGGAAAAGGAGTTGGAAGAATTGATCTCCAGTGGGCATAGGCTTTCTATGGTAATGGCTTGAATTGGACTATAGGATAAAGATAAAGATACAGAATACTTCAAGCTTTACTCTGAGATGATCTCCATGCTCTTATTATCATGTTATTGAATGGGACCGATATCAGTTGGCAACGACCAAAATGAATAGTTTGTTCAAATTCAAAGACTAAATAGGCATTTCGAATGTTTAGCAAATAAATTAAAACGAGTCTTGAAAGTTTAGAGATGAAAATAGTGGTTGAACTAATATTGTATACCTTGAATGCTAACAAACTTATTTTCTTTTTTCATGAAGGCTGTCAAATTGGTCGCTATCAAAACGTCAGCTAGTAGGAAAACTGTCTATTCAATTGCATTACGAAGATTCGGGAATCAGCTTGGAGCGGAGAACGATTCGTGCAAATAA
mRNA sequence
ACAATAATTTACACATAAAATAATCGATAGTTTAATAATTTCATCGATTTTGTTGGCCTTTTGCTTGGATTTGGCGGTTCTTCGGAGATGGTGAAATCTTCGGTCTTCGTTGTGTAATCTTGTACTCTTCCTTCCTCCCACCGTCGCCCCCAATTCAATTCAGTTCGGCCTGTTTCCGCCGTAGAGCGACGGAGGGAAGCTGATGTTGACGCGTAGAATTCCTTCCGTGGCAGTTTATCTCCCGCAAGCTCTGCCATGGCGTCGTGGGCTACCTCATTCAATCAACACCAGGACGCCGCTTGAATTCCACTCATTGCTCTCTTTTTGCCCTAAAACTTGTTTACTTTCCTTTTGTTCCGCTTCACAATTCTCCTCCGAAGTTGCTGAACCAACTCATCTGGATGATTCCTCGAAGCGTGGTCCCCTGAAACCTGGGTTATATATAGTTAGCACACCAATTGGTAATCTTGAAGATATCACCTTACGTGCTCTACGTGTCTTAAAATCAGCAAACGTCATTCTTTCGGAGGATACAAGGCACTCAGGAAAGTTGCTTCAACATTTCAGTATTAAAACCCCTCTTTTGAGTTTTCACAAATTCAATGAGTCTCAAAGGGAGCAAACAGTTTTGAAGAGGTTAAAAGAGGGTGAAATTGTTGCACTAATTAGTGACGCGGGGACTCCAGGCATTAGTGATCCTGGTACTGAGTTGGTAAGACAATGTGTCAATGCAAGCATACCCGTTGTTCCTATTCCTGGACCCTCTGCTGTCATTGCTGCTCTTTCTGCCTCTGGCTTGTCGACCGATGAATTTACCTTCGTTGGATTTGTTCCTAAGCATGCTGCATCTAGAAGAGAGAGGCTGATGGTTTCAGCAAATGAGGAGGCGACGCAAATATTCTATGTTCCTCCGCACAAAGTTAAGCAGTTTCTCGAGGAAACTTCATCATTATTTGGTGAATCAAGGCAATGCGTCATAGCTCGTGAAATGACCAAGATACACGAGGAGTTTTGGCGGGGTACCCTGGCGGAAGCTAAAGAATACTTCTCGTTGCACCAAACGAAGGGTGAAATTACGCTGCTGATCGAAGGAAAGCTCAATTCTGAAGTTGAAACTCCATCGGAATCACAGCTGGAAAAGGAGTTGGAAGAATTGATCTCCAGTGGGCATAGGCTTTCTATGGCTGTCAAATTGGTCGCTATCAAAACGTCAGCTAGTAGGAAAACTGTCTATTCAATTGCATTACGAAGATTCGGGAATCAGCTTGGAGCGGAGAACGATTCGTGCAAATAA
Coding sequence (CDS)
ATGTTGACGCGTAGAATTCCTTCCGTGGCAGTTTATCTCCCGCAAGCTCTGCCATGGCGTCGTGGGCTACCTCATTCAATCAACACCAGGACGCCGCTTGAATTCCACTCATTGCTCTCTTTTTGCCCTAAAACTTGTTTACTTTCCTTTTGTTCCGCTTCACAATTCTCCTCCGAAGTTGCTGAACCAACTCATCTGGATGATTCCTCGAAGCGTGGTCCCCTGAAACCTGGGTTATATATAGTTAGCACACCAATTGGTAATCTTGAAGATATCACCTTACGTGCTCTACGTGTCTTAAAATCAGCAAACGTCATTCTTTCGGAGGATACAAGGCACTCAGGAAAGTTGCTTCAACATTTCAGTATTAAAACCCCTCTTTTGAGTTTTCACAAATTCAATGAGTCTCAAAGGGAGCAAACAGTTTTGAAGAGGTTAAAAGAGGGTGAAATTGTTGCACTAATTAGTGACGCGGGGACTCCAGGCATTAGTGATCCTGGTACTGAGTTGGTAAGACAATGTGTCAATGCAAGCATACCCGTTGTTCCTATTCCTGGACCCTCTGCTGTCATTGCTGCTCTTTCTGCCTCTGGCTTGTCGACCGATGAATTTACCTTCGTTGGATTTGTTCCTAAGCATGCTGCATCTAGAAGAGAGAGGCTGATGGTTTCAGCAAATGAGGAGGCGACGCAAATATTCTATGTTCCTCCGCACAAAGTTAAGCAGTTTCTCGAGGAAACTTCATCATTATTTGGTGAATCAAGGCAATGCGTCATAGCTCGTGAAATGACCAAGATACACGAGGAGTTTTGGCGGGGTACCCTGGCGGAAGCTAAAGAATACTTCTCGTTGCACCAAACGAAGGGTGAAATTACGCTGCTGATCGAAGGAAAGCTCAATTCTGAAGTTGAAACTCCATCGGAATCACAGCTGGAAAAGGAGTTGGAAGAATTGATCTCCAGTGGGCATAGGCTTTCTATGGCTGTCAAATTGGTCGCTATCAAAACGTCAGCTAGTAGGAAAACTGTCTATTCAATTGCATTACGAAGATTCGGGAATCAGCTTGGAGCGGAGAACGATTCGTGCAAATAA
Protein sequence
MLTRRIPSVAVYLPQALPWRRGLPHSINTRTPLEFHSLLSFCPKTCLLSFCSASQFSSEVAEPTHLDDSSKRGPLKPGLYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQHFSIKTPLLSFHKFNESQREQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNASIPVVPIPGPSAVIAALSASGLSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPHKVKQFLEETSSLFGESRQCVIAREMTKIHEEFWRGTLAEAKEYFSLHQTKGEITLLIEGKLNSEVETPSESQLEKELEELISSGHRLSMAVKLVAIKTSASRKTVYSIALRRFGNQLGAENDSCK
Homology
BLAST of CmoCh12G003930.1 vs. ExPASy Swiss-Prot
Match:
P74038 (Ribosomal RNA small subunit methyltransferase I OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rsmI PE=3 SV=1)
HSP 1 Score: 240.0 bits (611), Expect = 4.3e-62
Identity = 126/270 (46.67%), Postives = 175/270 (64.81%), Query Frame = 0
Query: 79 LYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQHFSIKTPLLSFHKFNESQR 138
LY+V+TPIGNL D+T RA+ L++ ++I +EDTRH+GKLLQHF I TP +S+H N R
Sbjct: 4 LYLVATPIGNLGDMTPRAVETLQTVDLIAAEDTRHTGKLLQHFQITTPQISYHDHNRHGR 63
Query: 139 EQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNASIPVVPIPGPSAVIAALSASG 198
Q +L +L+ G+ +AL+SDAGTPGISDPG ELV C A+I V+PIPG +A+IAAL +SG
Sbjct: 64 TQELLAKLQAGQNIALVSDAGTPGISDPGQELVAACGEANIEVIPIPGATALIAALISSG 123
Query: 199 LSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPHKVKQFLEETSSLFGESRQCV 258
L+TD F F GF+ R++ L A EE T I Y PH++ L + + G+ R
Sbjct: 124 LATDRFVFEGFLSTKNRPRQQLLQSLAQEERTIILYEAPHRLLATLTDLQTFLGQERSLT 183
Query: 259 IAREMTKIHEEFWRGTLAEAKEYFSLHQTKGEITLLIEGKLNSEVETPSESQLEKELEEL 318
+ARE+TK HE+FWRGTL A YF+ + KGE L+I G + + SE L EL L
Sbjct: 184 VARELTKYHEQFWRGTLQTAIAYFTENTPKGEFCLVIAGATPEDRPSFSEENLRDELRSL 243
Query: 319 ISSGHRLSMAVKLVAIKTSASRKTVYSIAL 349
++ G S A + +A +T R+ +Y ++L
Sbjct: 244 MAKGLTRSQASRQLAEETKLPRRQLYQLSL 273
BLAST of CmoCh12G003930.1 vs. ExPASy Swiss-Prot
Match:
P45298 (Ribosomal RNA small subunit methyltransferase I OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rsmI PE=3 SV=1)
HSP 1 Score: 214.2 bits (544), Expect = 2.5e-54
Identity = 120/272 (44.12%), Postives = 165/272 (60.66%), Query Frame = 0
Query: 79 LYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQHFSIKTPLLSFHKFNESQR 138
LYIV+TPIGNL+DIT RAL ++I +EDTRHSG LL H+ IK P + H NE ++
Sbjct: 8 LYIVATPIGNLQDITQRALETFAQVDLIAAEDTRHSGLLLSHYGIKKPFFALHDHNEQEK 67
Query: 139 EQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNASIPVVPIPGPSAVIAALSASG 198
++++LK+G +ALISDAGTP ISDPG LVRQC A I VVP+PG A I AL ASG
Sbjct: 68 AHILVEKLKQGSNIALISDAGTPLISDPGFHLVRQCREAGIRVVPLPGACAAITALCASG 127
Query: 199 LSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPHKVKQFLEETSSLFGESRQCV 258
+++D F F GF+P + +R+++L A E+ T IFY H++ LE+ ++ GE R V
Sbjct: 128 IASDRFCFEGFLPAKSKARKDKLENIAEEDRTLIFYESTHRILDTLEDMQAVLGEERYIV 187
Query: 259 IAREMTKIHEEFWRGTLAEAKEYF--SLHQTKGEITLLIEGKLNSEVETPSESQLEKELE 318
+AREMTK E T+ +E+ ++TKGE+ L++EGK S+ Q K L
Sbjct: 188 LAREMTKTWETITGNTIKNLREWLLEDPNRTKGEMVLIVEGKPKSDNNDEISPQAVKAL- 247
Query: 319 ELISSGHRLSMAVKLVAIKTSASRKTVYSIAL 349
ELI+ L A +VA + +Y L
Sbjct: 248 ELIAEELPLKKAAAIVAELYGYKKNALYQFGL 278
BLAST of CmoCh12G003930.1 vs. ExPASy Swiss-Prot
Match:
Q9KGL2 (Ribosomal RNA small subunit methyltransferase I OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=rsmI PE=3 SV=1)
HSP 1 Score: 213.4 bits (542), Expect = 4.3e-54
Identity = 121/276 (43.84%), Postives = 167/276 (60.51%), Query Frame = 0
Query: 76 KPGLYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQHFSIKTPLLSFHKFNE 135
K LY+V+TPIGNLED+T RA+R LK A+ I +EDTR + KLL HF I T L+S+H+ N+
Sbjct: 13 KGTLYLVATPIGNLEDVTFRAIRTLKEADQIAAEDTRQTKKLLNHFDIATKLVSYHEHNK 72
Query: 136 SQREQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNASIPVVPIPGPSAVIAALS 195
+ ++ L EG +AL+SDAG P ISDPG ELV + I V+PIPG +A + AL
Sbjct: 73 ETMGKRLIDDLIEGRTIALVSDAGMPAISDPGYELVVSAIKEGIAVIPIPGANAAVTALI 132
Query: 196 ASGLSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPHKVKQFLEETSSLFGESR 255
ASGL T+ F F+GF+P+ RR+ L + +AT IFY PH++K L++ + G +R
Sbjct: 133 ASGLPTESFQFIGFLPRQKKQRRQALEETKPTKATLIFYESPHRLKDTLDDMLLILG-NR 192
Query: 256 QCVIAREMTKIHEEFWRGTLAEAKEYFSLHQTKGEITLLIEGKLNSEVETPSESQLE--- 315
I RE+TK +EEF RGTL EA + KGE L++EG N E P E E
Sbjct: 193 HVSICRELTKTYEEFLRGTLEEAVHWAREATIKGEFCLIVEG--NGEKVEPEEVWWESLS 252
Query: 316 --KELEELISSGHRLSMAVKLVAIKTSASRKTVYSI 347
+ +E I+ G R A+K VA ++ +Y+I
Sbjct: 253 PVQHVEHYIALGFRSKEAIKQVATDRGVPKRDIYNI 285
BLAST of CmoCh12G003930.1 vs. ExPASy Swiss-Prot
Match:
Q9CN04 (Ribosomal RNA small subunit methyltransferase I OS=Pasteurella multocida (strain Pm70) OX=272843 GN=rsmI PE=3 SV=1)
HSP 1 Score: 210.3 bits (534), Expect = 3.6e-53
Identity = 118/275 (42.91%), Postives = 165/275 (60.00%), Query Frame = 0
Query: 79 LYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQHFSIKTPLLSFHKFNESQR 138
LYIV+TPIGNL+DIT RAL + + ++I +EDTRHSG LL H+ IK P + H NE Q+
Sbjct: 8 LYIVATPIGNLQDITQRALAIFEQVDLIAAEDTRHSGLLLSHYGIKKPFFALHDHNEQQK 67
Query: 139 EQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNASIPVVPIPGPSAVIAALSASG 198
++++L++G+ +ALISDAGTP ISDPG LVRQC A I VVPIPG A + AL ASG
Sbjct: 68 AHLLVEKLQQGQHIALISDAGTPLISDPGFHLVRQCRQAGIKVVPIPGACAAVTALCASG 127
Query: 199 LSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPHKVKQFLEETSSLFGESRQCV 258
+++D F F GF+P + +R ++L A EE T IFY H++ L + G R V
Sbjct: 128 IASDRFCFEGFLPAKSKARCDKLQNLAEEERTLIFYESTHRILDTLADIEKTLGAERYVV 187
Query: 259 IAREMTKIHEEFWRGTLAEAKEYF--SLHQTKGEITLLIEGKLNSEVETPSESQLEKELE 318
+ARE+TK E +A +++ ++TKGE+ L+IEGK+ E + + L +
Sbjct: 188 LAREITKTWETIVGDNVANLRQWLGEDPNRTKGEMVLIIEGKVKQETDEINPQAL--KAL 247
Query: 319 ELISSGHRLSMAVKLVAIKTSASRKTVYSIALRRF 352
ELIS L A +VA + +Y L F
Sbjct: 248 ELISQSLPLKKAAAIVAEIYGYKKNALYQYGLEHF 280
BLAST of CmoCh12G003930.1 vs. ExPASy Swiss-Prot
Match:
P67088 (Ribosomal RNA small subunit methyltransferase I OS=Escherichia coli O157:H7 OX=83334 GN=rsmI PE=3 SV=1)
HSP 1 Score: 204.5 bits (519), Expect = 2.0e-51
Identity = 118/276 (42.75%), Postives = 164/276 (59.42%), Query Frame = 0
Query: 79 LYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQHFSIKTPLLSFHKFNESQR 138
LYIV TPIGNL DIT RAL VL++ ++I +EDTRH+G LLQHF I L + H NE Q+
Sbjct: 14 LYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINARLFALHDHNEQQK 73
Query: 139 EQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNASIPVVPIPGPSAVIAALSASG 198
+T+L +L+EG+ +AL+SDAGTP I+DPG LVR C A I VVP+PGP A I ALSA+G
Sbjct: 74 AETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAITALSAAG 133
Query: 199 LSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPHKVKQFLEETSSLFGESRQCV 258
L +D F + GF+P + RR+ L E T IFY H++ LE+ ++ GESR V
Sbjct: 134 LPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLEDIVAVLGESRYVV 193
Query: 259 IAREMTKIHEEFWRGTLAEAKEYF--SLHQTKGEITLLIEGKLNSEVETPSESQLEKELE 318
+ARE+TK E + E + ++ KGE+ L++EG E + P+++
Sbjct: 194 LARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHKAQEEDLPADA---LRTL 253
Query: 319 ELISSGHRLSMAVKLVAIKTSASRKTVYSIALRRFG 353
L+ + L A L A + +Y AL + G
Sbjct: 254 ALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG 286
BLAST of CmoCh12G003930.1 vs. ExPASy TrEMBL
Match:
A0A6J1GK22 (uncharacterized protein LOC111454620 OS=Cucurbita moschata OX=3662 GN=LOC111454620 PE=3 SV=1)
HSP 1 Score: 706.8 bits (1823), Expect = 4.6e-200
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0
Query: 1 MLTRRIPSVAVYLPQALPWRRGLPHSINTRTPLEFHSLLSFCPKTCLLSFCSASQFSSEV 60
MLTRRIPSVAVYLPQALPWRRGLPHSINTRTPLEFHSLLSFCPKTCLLSFCSASQFSSEV
Sbjct: 1 MLTRRIPSVAVYLPQALPWRRGLPHSINTRTPLEFHSLLSFCPKTCLLSFCSASQFSSEV 60
Query: 61 AEPTHLDDSSKRGPLKPGLYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQH 120
AEPTHLDDSSKRGPLKPGLYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQH
Sbjct: 61 AEPTHLDDSSKRGPLKPGLYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQH 120
Query: 121 FSIKTPLLSFHKFNESQREQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNASIP 180
FSIKTPLLSFHKFNESQREQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNASIP
Sbjct: 121 FSIKTPLLSFHKFNESQREQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNASIP 180
Query: 181 VVPIPGPSAVIAALSASGLSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPHKV 240
VVPIPGPSAVIAALSASGLSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPHKV
Sbjct: 181 VVPIPGPSAVIAALSASGLSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPHKV 240
Query: 241 KQFLEETSSLFGESRQCVIAREMTKIHEEFWRGTLAEAKEYFSLHQTKGEITLLIEGKLN 300
KQFLEETSSLFGESRQCVIAREMTKIHEEFWRGTLAEAKEYFSLHQTKGEITLLIEGKLN
Sbjct: 241 KQFLEETSSLFGESRQCVIAREMTKIHEEFWRGTLAEAKEYFSLHQTKGEITLLIEGKLN 300
Query: 301 SEVETPSESQLEKELEELISSGHRLSMAVKLVAIKTSASRKTVYSIALRRFGNQLGAEND 360
SEVETPSESQLEKELEELISSGHRLSMAVKLVAIKTSASRKTVYSIALRRFGNQLGAEND
Sbjct: 301 SEVETPSESQLEKELEELISSGHRLSMAVKLVAIKTSASRKTVYSIALRRFGNQLGAEND 360
Query: 361 SCK 364
SCK
Sbjct: 361 SCK 363
BLAST of CmoCh12G003930.1 vs. ExPASy TrEMBL
Match:
A0A6J1KTF7 (uncharacterized protein LOC111496252 OS=Cucurbita maxima OX=3661 GN=LOC111496252 PE=3 SV=1)
HSP 1 Score: 689.1 bits (1777), Expect = 9.9e-195
Identity = 354/363 (97.52%), Postives = 358/363 (98.62%), Query Frame = 0
Query: 1 MLTRRIPSVAVYLPQALPWRRGLPHSINTRTPLEFHSLLSFCPKTCLLSFCSASQFSSEV 60
MLTRRIPSVAVYLPQALPWRRG PHSINTRTPLEFHSLLSFCPKTCLLSFCSASQFSSEV
Sbjct: 1 MLTRRIPSVAVYLPQALPWRRGPPHSINTRTPLEFHSLLSFCPKTCLLSFCSASQFSSEV 60
Query: 61 AEPTHLDDSSKRGPLKPGLYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQH 120
AEPTH+DDSSKRG LKPGLYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQH
Sbjct: 61 AEPTHMDDSSKRGSLKPGLYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQH 120
Query: 121 FSIKTPLLSFHKFNESQREQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNASIP 180
FSIKTPLLSFHKFNESQREQTVLKRLKEGEIVALISDAGTPGISDPGTELVR CVNASIP
Sbjct: 121 FSIKTPLLSFHKFNESQREQTVLKRLKEGEIVALISDAGTPGISDPGTELVRLCVNASIP 180
Query: 181 VVPIPGPSAVIAALSASGLSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPHKV 240
VVPIPGPSAVIAALSASGLST+EFTFVGFVPKHAASRR+RLMVSANEEATQIFYVPPHKV
Sbjct: 181 VVPIPGPSAVIAALSASGLSTNEFTFVGFVPKHAASRRKRLMVSANEEATQIFYVPPHKV 240
Query: 241 KQFLEETSSLFGESRQCVIAREMTKIHEEFWRGTLAEAKEYFSLHQTKGEITLLIEGKLN 300
KQFLEETSSLFGESR+CVIAREMTKIHEEFWRGTLAEAKEYFSLHQTKGEITLLIEGKLN
Sbjct: 241 KQFLEETSSLFGESRKCVIAREMTKIHEEFWRGTLAEAKEYFSLHQTKGEITLLIEGKLN 300
Query: 301 SEVETPSESQLEKELEELISSGHRLSMAVKLVAIKTSASRKTVYSIALRRFGNQLGAEND 360
SEVETPSESQLE ELEELISSGHRLSMAVKLVAIKTSASRKTVYSIALRRFGNQLG END
Sbjct: 301 SEVETPSESQLENELEELISSGHRLSMAVKLVAIKTSASRKTVYSIALRRFGNQLGTEND 360
Query: 361 SCK 364
SCK
Sbjct: 361 SCK 363
BLAST of CmoCh12G003930.1 vs. ExPASy TrEMBL
Match:
A0A0A0LRJ7 (TP_methylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362440 PE=3 SV=1)
HSP 1 Score: 623.6 bits (1607), Expect = 5.1e-175
Identity = 321/365 (87.95%), Postives = 339/365 (92.88%), Query Frame = 0
Query: 1 MLTRRIPSVAVYLPQALPWRRGLPH--SINTRTPLEFHSLLSFCPKTCLLSFCSASQFSS 60
ML RRIPSVAVYLPQALPWRR PH SIN T LEFHSLL+FCPKT L+S CSASQ +
Sbjct: 1 MLARRIPSVAVYLPQALPWRRRPPHSYSINYGTALEFHSLLAFCPKTLLVSLCSASQLTY 60
Query: 61 EVAEPTHLDDSSKRGPLKPGLYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLL 120
E EP H ++SSKRG LKPGLY+V TPIGNLEDITLRALRVLKSA+VILSEDTRHSGKLL
Sbjct: 61 EAVEPIHAEESSKRGSLKPGLYLVGTPIGNLEDITLRALRVLKSAHVILSEDTRHSGKLL 120
Query: 121 QHFSIKTPLLSFHKFNESQREQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNAS 180
QHFSIKTPLLSFHKFNESQREQTVLKRLK+GEIVALISDAGTPGISDPGTELVR CVN +
Sbjct: 121 QHFSIKTPLLSFHKFNESQREQTVLKRLKQGEIVALISDAGTPGISDPGTELVRLCVNEN 180
Query: 181 IPVVPIPGPSAVIAALSASGLSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPH 240
IPVVP+PGPSAV+AA+SASGLSTDEFTFVGF+PKHAASRRERLMVSANEEATQIFYVPPH
Sbjct: 181 IPVVPVPGPSAVVAAISASGLSTDEFTFVGFLPKHAASRRERLMVSANEEATQIFYVPPH 240
Query: 241 KVKQFLEETSSLFGESRQCVIAREMTKIHEEFWRGTLAEAKEYFSLHQTKGEITLLIEGK 300
K+KQFLEETS LFGESR+CVIAREMTKIHEEFWRGTLAEAKE+FSL+QTKGEITLLIEGK
Sbjct: 241 KLKQFLEETSQLFGESRRCVIAREMTKIHEEFWRGTLAEAKEFFSLNQTKGEITLLIEGK 300
Query: 301 LNSEVETPSESQLEKELEELISSGHRLSMAVKLVAIKTSASRKTVYSIALRRFGNQLGAE 360
L EVETPSESQLEKELEELIS+GHRLSMAVKLVA KTS SRKTVYSIALRRFGNQLG E
Sbjct: 301 LCPEVETPSESQLEKELEELISTGHRLSMAVKLVASKTSTSRKTVYSIALRRFGNQLGVE 360
Query: 361 NDSCK 364
NDSCK
Sbjct: 361 NDSCK 365
BLAST of CmoCh12G003930.1 vs. ExPASy TrEMBL
Match:
A0A1S3BBU6 (ribosomal RNA small subunit methyltransferase I OS=Cucumis melo OX=3656 GN=LOC103488001 PE=3 SV=1)
HSP 1 Score: 623.2 bits (1606), Expect = 6.7e-175
Identity = 318/365 (87.12%), Postives = 342/365 (93.70%), Query Frame = 0
Query: 1 MLTRRIPSVAVYLPQALPWRRGLP--HSINTRTPLEFHSLLSFCPKTCLLSFCSASQFSS 60
ML RR+PSVAVYLPQALPWRR P HSIN+RT L FHSLL+FCPKT L+S CSASQ ++
Sbjct: 1 MLARRMPSVAVYLPQALPWRRRPPHSHSINSRTALVFHSLLAFCPKTILVSLCSASQLAT 60
Query: 61 EVAEPTHLDDSSKRGPLKPGLYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLL 120
E EP H ++ SKRGPLKPGLY+V TPIGNLEDITLRALRVLKSA+VILSEDTRHSGKLL
Sbjct: 61 EAVEPIHAEEFSKRGPLKPGLYLVGTPIGNLEDITLRALRVLKSAHVILSEDTRHSGKLL 120
Query: 121 QHFSIKTPLLSFHKFNESQREQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNAS 180
QHFSIKTPLLSFHKFNESQREQTVLKRLK+GEIVALISDAGTPGISDPGTELVR CVN +
Sbjct: 121 QHFSIKTPLLSFHKFNESQREQTVLKRLKQGEIVALISDAGTPGISDPGTELVRLCVNEN 180
Query: 181 IPVVPIPGPSAVIAALSASGLSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPH 240
IPVVP+PGPSAV+AA+SASGLSTDEFTFVGF+PKHAA+RRERLMVSANEEATQIFYVPPH
Sbjct: 181 IPVVPVPGPSAVVAAISASGLSTDEFTFVGFLPKHAATRRERLMVSANEEATQIFYVPPH 240
Query: 241 KVKQFLEETSSLFGESRQCVIAREMTKIHEEFWRGTLAEAKEYFSLHQTKGEITLLIEGK 300
K+KQFLEETS LFGESR+CVIAREMTKIHEEFWRGTLAEAKE+FSL+ TKGEITLLIEGK
Sbjct: 241 KLKQFLEETSQLFGESRRCVIAREMTKIHEEFWRGTLAEAKEFFSLNPTKGEITLLIEGK 300
Query: 301 LNSEVETPSESQLEKELEELISSGHRLSMAVKLVAIKTSASRKTVYSIALRRFGNQLGAE 360
L+ EVETPSESQLEKELEELIS+GHRLSMAVKLVA KTSASRKTVYSIALRRFGNQLG E
Sbjct: 301 LSPEVETPSESQLEKELEELISTGHRLSMAVKLVASKTSASRKTVYSIALRRFGNQLGVE 360
Query: 361 NDSCK 364
N+SCK
Sbjct: 361 NNSCK 365
BLAST of CmoCh12G003930.1 vs. ExPASy TrEMBL
Match:
A0A6J1CS92 (uncharacterized protein LOC111014109 OS=Momordica charantia OX=3673 GN=LOC111014109 PE=3 SV=1)
HSP 1 Score: 603.2 bits (1554), Expect = 7.1e-169
Identity = 307/363 (84.57%), Postives = 335/363 (92.29%), Query Frame = 0
Query: 1 MLTRRIPSVAVYLPQALPWRRGLPHSINTRTPLEFHSLLSFCPKTCLLSFCSASQFSSEV 60
ML RRIPS+AV+LP+ +PWRRG H IN RT L+ H SFCPKTCL+S CSASQ SSEV
Sbjct: 1 MLARRIPSMAVHLPEVVPWRRGPSHCINARTALDSH---SFCPKTCLVSLCSASQLSSEV 60
Query: 61 AEPTHLDDSSKRGPLKPGLYIVSTPIGNLEDITLRALRVLKSANVILSEDTRHSGKLLQH 120
A+ ++SSKRGPLKPGLY+V TPIGNLEDITLRA+RVLKSA+VILSEDTRHSGKLL H
Sbjct: 61 ADSVQAEESSKRGPLKPGLYLVGTPIGNLEDITLRAIRVLKSAHVILSEDTRHSGKLLHH 120
Query: 121 FSIKTPLLSFHKFNESQREQTVLKRLKEGEIVALISDAGTPGISDPGTELVRQCVNASIP 180
F+I+TPLLSFHKFNESQREQ+VLKRLK+GEIVALISDAGTPGISDPG+ELV+ CVN IP
Sbjct: 121 FNIRTPLLSFHKFNESQREQSVLKRLKQGEIVALISDAGTPGISDPGSELVKLCVNEDIP 180
Query: 181 VVPIPGPSAVIAALSASGLSTDEFTFVGFVPKHAASRRERLMVSANEEATQIFYVPPHKV 240
VVPIPGPSAV+AALSASGLSTDEFTFVGFVPKH+ASRRERL VSANEEATQIFYVPPHK+
Sbjct: 181 VVPIPGPSAVVAALSASGLSTDEFTFVGFVPKHSASRRERLTVSANEEATQIFYVPPHKL 240
Query: 241 KQFLEETSSLFGESRQCVIAREMTKIHEEFWRGTLAEAKEYFSLHQTKGEITLLIEGKLN 300
KQFLEET SLFGESR+CVIAREMTKIHEEFWRGTLAEAKE+FSLHQTKGEITLLIEGKL+
Sbjct: 241 KQFLEETLSLFGESRRCVIAREMTKIHEEFWRGTLAEAKEFFSLHQTKGEITLLIEGKLD 300
Query: 301 SEVETPSESQLEKELEELISSGHRLSMAVKLVAIKTSASRKTVYSIALRRFGNQLGAEND 360
S VE PSE QLEKEL+ELISSGHRLSMAVKLVA KTSASRKTVYSIALR+FGNQLGA++D
Sbjct: 301 SGVEAPSELQLEKELQELISSGHRLSMAVKLVASKTSASRKTVYSIALRKFGNQLGADSD 360
Query: 361 SCK 364
SCK
Sbjct: 361 SCK 360
BLAST of CmoCh12G003930.1 vs. TAIR 10
Match:
AT1G45110.1 (Tetrapyrrole (Corrin/Porphyrin) Methylases )
HSP 1 Score: 436.0 bits (1120), Expect = 2.9e-122
Identity = 219/316 (69.30%), Postives = 264/316 (83.54%), Query Frame = 0
Query: 45 TCLLSFCSASQFSSEVAEPTHLDDSSKRGPLKPGLYIVSTPIGNLEDITLRALRVLKSAN 104
T +SFCS+S+F+ VA+ D SKRGPLKPGLY+V TPIGNLEDITLRA+RVL+SA+
Sbjct: 28 TAAISFCSSSEFADSVAK-----DDSKRGPLKPGLYLVGTPIGNLEDITLRAIRVLRSAD 87
Query: 105 VILSEDTRHSGKLLQHFSIKTPLLSFHKFNESQREQTVLKRLKEGEIVALISDAGTPGIS 164
VILSEDTRHSGKLLQ+++IK LLS+HKFNE+QREQ VL RLK+GEIVALISDAGTPGIS
Sbjct: 88 VILSEDTRHSGKLLQYYNIKAQLLSYHKFNEAQREQAVLTRLKQGEIVALISDAGTPGIS 147
Query: 165 DPGTELVRQCVNASIPVVPIPGPSAVIAALSASGLSTDEFTFVGFVPKHAASRRERLMVS 224
DPGT+L + C +I V+PIPG AV+AALSASGL TDEFTFVGF+PKH+ +R+ERL+VS
Sbjct: 148 DPGTQLAKMCAKENIDVIPIPGACAVVAALSASGLETDEFTFVGFLPKHSGTRKERLIVS 207
Query: 225 ANEEATQIFYVPPHKVKQFLEETSSLFGESRQCVIAREMTKIHEEFWRGTLAEAKEYFSL 284
+NE TQIFYVPPHK+ QFLEET+ FGESRQCVIARE+TK+HEEFWRG++AEAK+ F +
Sbjct: 208 SNETRTQIFYVPPHKLSQFLEETTPYFGESRQCVIAREITKLHEEFWRGSIAEAKQEFLI 267
Query: 285 HQTKGEITLLIEGKLNSEVETPSESQLEKELEELISSGHRLSMAVKLVAIKTSASRKTVY 344
Q KGEITLLIEGK ++ E P+ESQLE+EL LIS GH LS AVK VA +TS +K VY
Sbjct: 268 RQPKGEITLLIEGKEETKAENPTESQLEEELRGLISDGHSLSTAVKTVAERTSMRKKEVY 327
Query: 345 SIALRRFGNQLGAEND 361
S+AL++FG Q+ E +
Sbjct: 328 SLALKKFGKQIRVEEE 338
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P74038 | 4.3e-62 | 46.67 | Ribosomal RNA small subunit methyltransferase I OS=Synechocystis sp. (strain PCC... | [more] |
P45298 | 2.5e-54 | 44.12 | Ribosomal RNA small subunit methyltransferase I OS=Haemophilus influenzae (strai... | [more] |
Q9KGL2 | 4.3e-54 | 43.84 | Ribosomal RNA small subunit methyltransferase I OS=Bacillus halodurans (strain A... | [more] |
Q9CN04 | 3.6e-53 | 42.91 | Ribosomal RNA small subunit methyltransferase I OS=Pasteurella multocida (strain... | [more] |
P67088 | 2.0e-51 | 42.75 | Ribosomal RNA small subunit methyltransferase I OS=Escherichia coli O157:H7 OX=8... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GK22 | 4.6e-200 | 100.00 | uncharacterized protein LOC111454620 OS=Cucurbita moschata OX=3662 GN=LOC1114546... | [more] |
A0A6J1KTF7 | 9.9e-195 | 97.52 | uncharacterized protein LOC111496252 OS=Cucurbita maxima OX=3661 GN=LOC111496252... | [more] |
A0A0A0LRJ7 | 5.1e-175 | 87.95 | TP_methylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G36244... | [more] |
A0A1S3BBU6 | 6.7e-175 | 87.12 | ribosomal RNA small subunit methyltransferase I OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A6J1CS92 | 7.1e-169 | 84.57 | uncharacterized protein LOC111014109 OS=Momordica charantia OX=3673 GN=LOC111014... | [more] |
Match Name | E-value | Identity | Description | |
AT1G45110.1 | 2.9e-122 | 69.30 | Tetrapyrrole (Corrin/Porphyrin) Methylases | [more] |