CmoCh11G011870 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGGATCAGGTTTGACATTGCTGCATTGTTGATTAATCAAGTTTATTTTCGTTGCGGAAAATATCTTATGATGATATTACTCACACGTGCCAGCTTATCACATAAGAAATATCTTGATCTTTGACTACAAGGGAATAATCTTAGATTTTGTAATTAATCAAATGGTGAACTATGGCAGCCTGGTAGGTGCAGCAATACCCTTTCCCCTCCATATAAGATAGTGTATTACATGTTATGTAATGTCAGTCACACTCCACATTATTGACATCTTGCTCTTTAGCATTGTGTTGTGTTATACATCATTGTAACAGCCCAAGCCCAAACCCACTGCTAACAGATATTGTCCTCTTCGGGCTTTCTCTCAAGGTTTTAAAATGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAAAATGCTTCTTTCTCCTCTCCAACCAACGTGGGATCTCATAATCCACCCTCCTTGGGGGCCCGACTATGAAGTCCCACAACAATTTGAGAGAGATACGAGTGCTAGCGAGGACGCTGGGCTCTAAAGGGGGGTGAACTGCGAGATCCCATGTCGATTGGATAGGGGAACGAGTGTCAGCGAGGACGCTAGGCCCTGTTTTGGGGAGTGGATTGTGAGATTCCACATCGGTTGGAAAGGGGAACAAAACATTCTTTATAAGGGTGTGGAAACTTCTCCTAGCAGACGCGTTTTAAAACTTTGAGGGGAAGCTCAGAAGGAAAAGCCCAAAGAAGATAATATCTGCTAGCGTTGGGCTTGGGCTTGGGTTGTTACAATCATTGTCATTGATCTTTGTGAAAGAGATCCATTTTTGGTTGGAGAAAGTCTTTTAAATTAGGGGAACCATTTTTTATTGATATATCTTTTATGATTGAGAATGATAAAATGTTTTCTTAATCGGAGGTAGTATTGAATGCTTGGATGCTTCTAGCTTTAAGGTGTGCTAGTTTCGATGGAGATGCTGACCGACTCGTATATTTTACCGTGCCATCGGGAATTACCAATAAGATCAATCTTGTTGATGGGGACAAAATATTATCTTTATTTGCCATATTCATCAAGGAACAGTTTACGATTGTGGCAGCAAGGAGTGAAGCCACCAAAATTGATTTTCAGCTCTGCCTTGGTGTTGTCCAAACTGCTTATGCGAATGGATCCTCGACTCGGTATCTTAAAGAGTTGGAACTGGAAGTAGTATTCACTCCAACCGGAGTAAAGTACTTGCATGAGAAAGCTGCTGAATTTGATATTGGCATCCATTTTGAAGCAAATTGTCATGGGACTGTCTTGTTCTCAGATTACTGCATTTCAATGTTATATCCCATTCATTTGGAGCTCTCCAATGTATCTAATGGTAATATTTATGTGGGAAAGAGATGGCCCTCTCGTGAAGTTATTACAGTTTTCGCGTGTAGGAGTTAATTTATTGTATGTTTCAGGTTCGGAATCGGAAAAGGCAGCCTTCAGATTACTGGCAGTCAGCAAATTGATCAATCAAGCTGTGGGAGATGCCCTGAGTGGCTTGCTCCTAGTTGAGGCTATTCTACAGCACAAACATTGGTCGATATGTGACTGGAATGAGCTCTATCGGGACCTACCGAGTAGGCAGCTCAAGGTTTGCTTGTCTGTTTCCTCACTATGAAGCAAGTTTATATTGTTCTCTAGTTTTTATTTTTGAGAGGAAAGAAGCAAAGCTATTGTTTGTGGGACAAGTTAGAGGGAAAATAAATGTAATTTACAGTTCTTGTTCATTTTGCTATTGTTTGTGGCAATAACACTATCAATTCAATTACTGTAGTAGGCCAGATTGTAAGACTGTGGTAGCATGCATGTTCTTTGTGGCTTCCGTACGTGTGAGATTCCATATCGATTGAGGAGGAGAACGGAACATTTTTTACAAGGGTGTGGAAACCTCTTCCTAGCAGACGTGTTTTAAAATACTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACCATGTCTGTTAGCGGTGGGTTTGGGCCGTTACAAATGGTATCAACGCTAGACATTGGGCGATATGCCAGCGAGGAGGTTGAGCCCCGAAGGGGGGTGGACATGAGGTGGTGTGCCAACAAGGACACTAGGCCTCGAAAAGGGTGGATTGGGGGGTCCCACATCGATTGGGGAAGGGAACGAGTGCCAGCGAGGAGGTTGAGCCCCGAAGGGGGTGGACACGAGGCGGTGTGCCAGTAAGGATGCTGAGCCCTAAAAGGGGTGGATTGGAGAGTCCCACATCGATTGGAGAAGAGAACAAGTGCCAGCGAGGATGCTGGGCCTTGAAGGGGGGTGGATTGTAAAATCCCACACCGGTTGGGGAAGAGAACGAAACATATTCTTTATAATAGTGTGGAAACACCTAACAAATGTGTTTTAAAAATCTTGAGAGGAAGCCCGAATGGGAAAGCCCAAAGAGGACAATATCTGCTAGCAGTAGACTTGGACCGTTGCAGTATGCAACTTTTTGAAGAAGAAAGTCGTTGATAGAACAGCGGTTGAAACAACTAATGCAGAACTGAGGTTGTAAAGCCACCTGGGTTACAAGAAGCAATCAATGTGGAAACAGGTAACGACAACTCTGAAATCTATATTTGCTTAACTTAATAAGTTGTATGTTTCATATTTTTCAGTAAGATCTGTTTCTTGTACTTCATTTCAGCTCAACTAGATTGATTGTTTCCCTTAGATATGCGATCCTTTTCTCCGTTCAGATTACGACATCTGATATCCCTCTGATCTCTATATTCTCGTTATCTTTCATTTTCTGTTGCAGCAAAATATCCTCAAGGACGTTGTTTCATAAGGCCATCAGGAACCGAGGACGTTATTCGTGTCTATGCAGAGGCATCCACACAGGAAGCAGCAGATAATCTTGCAAACTCGGTAGCAAAACTAGTGGACCAATTCCTTGGGGTTGGCAGCTCGAAACAAGCAGATTAAGGAACGGCCAAGGTACACATAATGGTTCGACATAAACTTAAATCTTTATACACCTGAGTCGATAACATTAGCTTCTCGTTCTCGTTTTTTTTATACTTCACAACCTCAAGCTTAACATAATGTTGCCGGTAGTGATTCTTTAACATTGGTCTGAAATTGAGAAAATTATATGTATCTGCATGATTTTGTTCTTGGGAGCTGTTTAGAAAAGTTTTTGGGATGATTTATACTTCAATCTATAGATAATACTCATGATTCTGTAGGGAATAAC ATGTTGGGATCAGTATTGAATGCTTGGATGCTTCTAGCTTTAAGGTGTGCTAGTTTCGATGGAGATGCTGACCGACTCGTATATTTTACCGTGCCATCGGGAATTACCAATAAGATCAATCTTGTTGATGGGGACAAAATATTATCTTTATTTGCCATATTCATCAAGGAACAGTTTACGATTGTGGCAGCAAGGAGTGAAGCCACCAAAATTGATTTTCAGCTCTGCCTTGGTGTTGTCCAAACTGCTTATGCGAATGGATCCTCGACTCGGTATCTTAAAGAGTTGGAACTGGAAGTAGTATTCACTCCAACCGGAGTAAAGTACTTGCATGAGAAAGCTGCTGAATTTGATATTGGCATCCATTTTGAAGCAAATTGTCATGGGACTGTCTTGTTCTCAGATTACTGCATTTCAATGTTATATCCCATTCATTTGGAGCTCTCCAATGTATCTAATGGTTCGGAATCGGAAAAGGCAGCCTTCAGATTACTGGCAGTCAGCAAATTGATCAATCAAGCTGTGGGAGATGCCCTGAGTGGCTTGCTCCTAGTTGAGGCTATTCTACAGCACAAACATTGGTCGATATGTGACTGGAATGAGCTCTATCGGGACCTACCGAGTAGGCAGCTCAAGGTTTGCTTAACTGAGGTTGTAAAGCCACCTGGGTTACAAGAAGCAATCAATGTGGAAACAGCAAAATATCCTCAAGGACGTTGTTTCATAAGGCCATCAGGAACCGAGGACGTTATTCGTGTCTATGCAGAGGCATCCACACAGGAAGCAGCAGATAATCTTGCAAACTCGGTAGCAAAACTAGTGGACCAATTCCTTGGGGTTGGCAGCTCGAAACAAGCAGATTAAGGAACGGCCAAGGTACACATAATGGTTCGACATAAACTTAAATCTTTATACACCTGAGTCGATAACATTAGCTTCTCGTTCTCGTTTTTTTTATACTTCACAACCTCAAGCTTAACATAATGTTGCCGGTAGTGATTCTTTAACATTGGTCTGAAATTGAGAAAATTATATGTATCTGCATGATTTTGTTCTTGGGAGCTGTTTAGAAAAGTTTTTGGGATGATTTATACTTCAATCTATAGATAATACTCATGATTCTGTAGGGAATAAC ATGTTGGGATCAGTATTGAATGCTTGGATGCTTCTAGCTTTAAGGTGTGCTAGTTTCGATGGAGATGCTGACCGACTCGTATATTTTACCGTGCCATCGGGAATTACCAATAAGATCAATCTTGTTGATGGGGACAAAATATTATCTTTATTTGCCATATTCATCAAGGAACAGTTTACGATTGTGGCAGCAAGGAGTGAAGCCACCAAAATTGATTTTCAGCTCTGCCTTGGTGTTGTCCAAACTGCTTATGCGAATGGATCCTCGACTCGGTATCTTAAAGAGTTGGAACTGGAAGTAGTATTCACTCCAACCGGAGTAAAGTACTTGCATGAGAAAGCTGCTGAATTTGATATTGGCATCCATTTTGAAGCAAATTGTCATGGGACTGTCTTGTTCTCAGATTACTGCATTTCAATGTTATATCCCATTCATTTGGAGCTCTCCAATGTATCTAATGGTTCGGAATCGGAAAAGGCAGCCTTCAGATTACTGGCAGTCAGCAAATTGATCAATCAAGCTGTGGGAGATGCCCTGAGTGGCTTGCTCCTAGTTGAGGCTATTCTACAGCACAAACATTGGTCGATATGTGACTGGAATGAGCTCTATCGGGACCTACCGAGTAGGCAGCTCAAGGTTTGCTTAACTGAGGTTGTAAAGCCACCTGGGTTACAAGAAGCAATCAATGTGGAAACAGCAAAATATCCTCAAGGACGTTGTTTCATAAGGCCATCAGGAACCGAGGACGTTATTCGTGTCTATGCAGAGGCATCCACACAGGAAGCAGCAGATAATCTTGCAAACTCGGTAGCAAAACTAGTGGACCAATTCCTTGGGGTTGGCAGCTCGAAACAAGCAGATTAA MLGSVLNAWMLLALRCASFDGDADRLVYFTVPSGITNKINLVDGDKILSLFAIFIKEQFTIVAARSEATKIDFQLCLGVVQTAYANGSSTRYLKELELEVVFTPTGVKYLHEKAAEFDIGIHFEANCHGTVLFSDYCISMLYPIHLELSNVSNGSESEKAAFRLLAVSKLINQAVGDALSGLLLVEAILQHKHWSICDWNELYRDLPSRQLKVCLTEVVKPPGLQEAINVETAKYPQGRCFIRPSGTEDVIRVYAEASTQEAADNLANSVAKLVDQFLGVGSSKQAD Homology
BLAST of CmoCh11G011870 vs. ExPASy Swiss-Prot
Match: P57750 (Phosphoacetylglucosamine mutase OS=Arabidopsis thaliana OX=3702 GN=DRT101 PE=1 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 3.6e-88 Identity = 177/281 (62.99%), Postives = 207/281 (73.67%), Query Frame = 0
BLAST of CmoCh11G011870 vs. ExPASy Swiss-Prot
Match: Q6ZDQ1 (Phosphoacetylglucosamine mutase OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0195400 PE=2 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 8.3e-85 Identity = 163/280 (58.21%), Postives = 204/280 (72.86%), Query Frame = 0
BLAST of CmoCh11G011870 vs. ExPASy Swiss-Prot
Match: F1RQM2 (Phosphoacetylglucosamine mutase OS=Sus scrofa OX=9823 GN=PGM3 PE=1 SV=2) HSP 1 Score: 235.3 bits (599), Expect = 8.4e-61 Identity = 141/285 (49.47%), Postives = 179/285 (62.81%), Query Frame = 0
BLAST of CmoCh11G011870 vs. ExPASy Swiss-Prot
Match: Q9CYR6 (Phosphoacetylglucosamine mutase OS=Mus musculus OX=10090 GN=Pgm3 PE=1 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.1e-59 Identity = 134/278 (48.20%), Postives = 175/278 (62.95%), Query Frame = 0
BLAST of CmoCh11G011870 vs. ExPASy Swiss-Prot
Match: O95394 (Phosphoacetylglucosamine mutase OS=Homo sapiens OX=9606 GN=PGM3 PE=1 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 6.0e-59 Identity = 134/278 (48.20%), Postives = 172/278 (61.87%), Query Frame = 0
BLAST of CmoCh11G011870 vs. ExPASy TrEMBL
Match: A0A5A7U938 (Phosphoacetylglucosamine mutase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G00330 PE=3 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 8.2e-120 Identity = 226/284 (79.58%), Postives = 253/284 (89.08%), Query Frame = 0
BLAST of CmoCh11G011870 vs. ExPASy TrEMBL
Match: A0A5D3CGB4 (Phosphoacetylglucosamine mutase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004060 PE=3 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 8.2e-120 Identity = 226/284 (79.58%), Postives = 253/284 (89.08%), Query Frame = 0
BLAST of CmoCh11G011870 vs. ExPASy TrEMBL
Match: A0A1S3BPK3 (Phosphoacetylglucosamine mutase OS=Cucumis melo OX=3656 GN=LOC103492153 PE=3 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 8.2e-120 Identity = 226/284 (79.58%), Postives = 253/284 (89.08%), Query Frame = 0
BLAST of CmoCh11G011870 vs. ExPASy TrEMBL
Match: A0A0A0LWD9 (Phosphoacetylglucosamine mutase OS=Cucumis sativus OX=3659 GN=Csa_1G569350 PE=3 SV=1) HSP 1 Score: 437.6 bits (1124), Expect = 4.1e-119 Identity = 227/284 (79.93%), Postives = 251/284 (88.38%), Query Frame = 0
BLAST of CmoCh11G011870 vs. ExPASy TrEMBL
Match: A0A6J1HU92 (Phosphoacetylglucosamine mutase OS=Cucurbita maxima OX=3661 GN=LOC111467861 PE=3 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 1.6e-118 Identity = 226/285 (79.30%), Postives = 249/285 (87.37%), Query Frame = 0
BLAST of CmoCh11G011870 vs. NCBI nr
Match: KAG7022319.1 (Phosphoacetylglucosamine mutase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 511.9 bits (1317), Expect = 3.5e-141 Identity = 262/288 (90.97%), Postives = 268/288 (93.06%), Query Frame = 0
BLAST of CmoCh11G011870 vs. NCBI nr
Match: XP_008450619.1 (PREDICTED: phosphoacetylglucosamine mutase [Cucumis melo] >KAA0050907.1 phosphoacetylglucosamine mutase [Cucumis melo var. makuwa]) HSP 1 Score: 439.9 bits (1130), Expect = 1.7e-119 Identity = 226/284 (79.58%), Postives = 253/284 (89.08%), Query Frame = 0
BLAST of CmoCh11G011870 vs. NCBI nr
Match: TYK10258.1 (phosphoacetylglucosamine mutase [Cucumis melo var. makuwa]) HSP 1 Score: 439.9 bits (1130), Expect = 1.7e-119 Identity = 226/284 (79.58%), Postives = 253/284 (89.08%), Query Frame = 0
BLAST of CmoCh11G011870 vs. NCBI nr
Match: XP_011659880.1 (phosphoacetylglucosamine mutase [Cucumis sativus] >XP_031736426.1 phosphoacetylglucosamine mutase [Cucumis sativus] >KGN66058.1 hypothetical protein Csa_006858 [Cucumis sativus]) HSP 1 Score: 437.6 bits (1124), Expect = 8.5e-119 Identity = 227/284 (79.93%), Postives = 251/284 (88.38%), Query Frame = 0
BLAST of CmoCh11G011870 vs. NCBI nr
Match: KAG6590447.1 (Phosphoacetylglucosamine mutase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023983.1 Phosphoacetylglucosamine mutase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 437.2 bits (1123), Expect = 1.1e-118 Identity = 227/285 (79.65%), Postives = 250/285 (87.72%), Query Frame = 0
BLAST of CmoCh11G011870 vs. TAIR 10
Match: AT5G18070.1 (phosphoglucosamine mutase-related ) HSP 1 Score: 326.2 bits (835), Expect = 2.6e-89 Identity = 177/281 (62.99%), Postives = 207/281 (73.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|