CmoCh10G006400 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAGTGACGTATCCATCACGACTGGTCAATAACTCGGAAGAAGAAGAAAGAAAGAAAAATCTCAGAAATTTGTAAAATCTGAAACAACGTTTGGTTTGATTCCGAGGACGATCGGAACTACAAGAAGTTCACCATGAAATCCATCTTCGTTCTTTTTCTCTTCTCAGCTCTCGTTTCTCTTTCGACCCAATCCACCGATTCGAATGACCTAAAAGCGCCACCCTCCTCTGCCCACGCTCGCCTCGCCAATTACGGGTTTCCGTTTGGCCTTCTGCCGTCCGCCGTCTCCAGCTACACCATCAATGAAACCTCTGGTGACTTCTCTTTGGACCTCGGCGACTCGTGCAAGTTCACGCTTCCACCGGACAACTACGTGGCTTCGTTTTCTAGGGTTGTCACTGGTAAGATTGCAAAGGGTCGGATCCACAATCTCGACGGGATTCGAGTTCGTGCTTTGTTCCAGTGGTGGTCGATTACTGGTATTAGGTCCACCGGCGAGGATTTGGTCTTCGAGGTTGGGGTGATCACCGCTAAGTATCCGTCCAAGAGTTTCAACGAGAGCCCAGTGTGTGAAGGGCGTCGGTCTTCTTCGTAAGAGGTTCGGGTTTCTTCAATATTCTGCTCTCTGCATCTTTTACGGCCAATTCCACTGTTAGAATTAAAAAATTAGGAGTAATTCTGGATTGGATAGGGATACATGCATGTGAATGAGACTTTTTATCTAATTTTGAAAGCATTGTCTCTGGATTAAATTCTGCAGAAATGGGACGATGATACTGGTTTAAATTTTCTAACGTCTTCCTTTTTAACTGGATTGGATTCTAGTTATCTTCTATATTCACGAATTCTGAACAGAATCTGTATTTTCCTTCCATATTCATATCGTTCCTAATTCAAGGTTTTCTTGATTACACATTGACTAATTTGAGAGGTTAAATATATAATGTTTTCTGCTAAGAATCCCAGAATTTATAATGATGTAAAAAAGAAAAAATCATAGTTTCCAGACGTTGCGGAATGGAAACTTTCTCCTTGTGTAACATCTGCTGGATCACCTTGTAAATATATATATTATTGGCAGCTGGCTAGTTTTGGCAATAATTTTTAAGCATTGAAGTAACCGGATGGCCTTTGTTGAATCGGCTTCATTGATGAATAGGATCTTTATCTATTTTTGGATCTAACAACTTGGCGTTCTGTGGTTGAAAAGGTGATGGCGTTGCAATTTGGATTCTGAAAAGGAGGGAGTTTAACAAGAACAGAAGCCATTAAGGACAACCATACAATGACAAAACCCGTCTTATTATAAGATATTAAGGCATTGGTGATGTAGGCGATTTTGTTGCACATTAGGCCAAAAAATATGTCCAACCAAGAGGGCTAGCCAGCAAAATCCATTTTTGACTAGGAAGTTGTGAGATCTCACATCGGAGAGGGGGAAACTTTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAGAACTGTGAGGCTAATGGCTATACGTAATGGGCCAGAGTGGACAATATCTGCTAGCGGTGTGGTTGGCTGTTACAAATGGTATTAAAGTTGGTCATCGGGGGTGTGCTAGACGCTGGCTCCCAAAGGGGTGGACTGTGAGATCTCACATCGGTTGGGAAGGGGAACGAAACATTCCAGTGTAAAAACCTCTCTCTATCAGACGCATTTTAAAACCGTGAGGCTGATGGTGATATGTAACAGACCAAAACGGATAATATCTACTAGCAGTGGGGTCGGACTGTTATAGAAGTATTTATTATTATGAATAGGACCTTGTCACCTATGGATTTCAAATGACGTTGCTAGTAAGCTGACATAATCAAGGACCTATAGACATAAAACAAACAGAAAGATGATTCTTAGGTAAGGGGGAAAAAAGGTTGAGCTAGAGAGAGCGATGGAATAGGAAGTTGAATGTAGAAGTAGTTGTATGATTCTAGACTTTAAAGCTACTGTTCCCTAAGATCTATTTGGTTGGACAAAGAAAAAAACACCATTAGAAGAACCATCCCCGAGGTTGAATGGTCTGATACTCAGATCTTTGATAGAAGAAAGAAAAGTAGAGGATGTGAATAGCTTTAATTTGCTTGCATTGCAGGCATATAACATAGATTATTTTCTGAATGCACATTGTCATTCTCAGGTTCTAGAAAAGCTATCTTGTAGCCCCAATATACCTTTTACCAAAGAACCTTTTAGCTGGAGTCGTGTTTCTTTAATGTATTTGACCGGCCATGCTGTGATCTTTAGCTATCTTCATTGTGCTCATAACAAAACGAGTGAATTCTCGTTTGTCTGGTTCTTGATTTCTTTGCAAAAAAGCAGATTCCTCAACTTTGTTTCATTTGCTTTTTAAATATCTAATTAGCTTGACTTGTTAAAGTGCAGAATATATAATAGGATCTGTAATTTAATTGGTATTTTGGTTTTGTGCAGGGTATTCATTCACTTGAAGCATAGATGAACTTAGTGGATAATGCATATCATATTATGTTGCCTCTTTAAACTGAAATGTGAACCTACTAATTATTCTGGCTGTGTATCTGCCTGTACTCTGTATATGTTAACTCTTGCTTCTTCTAGTTCTGGATTGATACTCTCTTTTGATTAATAAGGTTTGTTCAGTGCTTGATAATGAGCCGATCAATATTCTATCTCGATCTCGGTTAATATTTGAATCAGCCAAAGTTTAGTAGATATTATCCACCTTGACCCG ACAGTGACGTATCCATCACGACTGGTCAATAACTCGGAAGAAGAAGAAAGAAAGAAAAATCTCAGAAATTTGTAAAATCTGAAACAACGTTTGGTTTGATTCCGAGGACGATCGGAACTACAAGAAGTTCACCATGAAATCCATCTTCGTTCTTTTTCTCTTCTCAGCTCTCGTTTCTCTTTCGACCCAATCCACCGATTCGAATGACCTAAAAGCGCCACCCTCCTCTGCCCACGCTCGCCTCGCCAATTACGGGTTTCCGTTTGGCCTTCTGCCGTCCGCCGTCTCCAGCTACACCATCAATGAAACCTCTGGTGACTTCTCTTTGGACCTCGGCGACTCGTGCAAGTTCACGCTTCCACCGGACAACTACGTGGCTTCGTTTTCTAGGGTTGTCACTGGTAAGATTGCAAAGGGTCGGATCCACAATCTCGACGGGATTCGAGTTCGTGCTTTGTTCCAGTGGTGGTCGATTACTGGTATTAGGTCCACCGGCGAGGATTTGGTCTTCGAGGTTGGGGTGATCACCGCTAAGTATCCGTCCAAGAGTTTCAACGAGAGCCCAGTGTGTGAAGGGCGTCGGTCTTCTTCGTAAGGTATTCATTCACTTGAAGCATAGATGAACTTAGTGGATAATGCATATCATATTATGTTGCCTCTTTAAACTGAAATGTGAACCTACTAATTATTCTGGCTGTGTATCTGCCTGTACTCTGTATATGTTAACTCTTGCTTCTTCTAGTTCTGGATTGATACTCTCTTTTGATTAATAAGGTTTGTTCAGTGCTTGATAATGAGCCGATCAATATTCTATCTCGATCTCGGTTAATATTTGAATCAGCCAAAGTTTAGTAGATATTATCCACCTTGACCCG ATGAAATCCATCTTCGTTCTTTTTCTCTTCTCAGCTCTCGTTTCTCTTTCGACCCAATCCACCGATTCGAATGACCTAAAAGCGCCACCCTCCTCTGCCCACGCTCGCCTCGCCAATTACGGGTTTCCGTTTGGCCTTCTGCCGTCCGCCGTCTCCAGCTACACCATCAATGAAACCTCTGGTGACTTCTCTTTGGACCTCGGCGACTCGTGCAAGTTCACGCTTCCACCGGACAACTACGTGGCTTCGTTTTCTAGGGTTGTCACTGGTAAGATTGCAAAGGGTCGGATCCACAATCTCGACGGGATTCGAGTTCGTGCTTTGTTCCAGTGGTGGTCGATTACTGGTATTAGGTCCACCGGCGAGGATTTGGTCTTCGAGGTTGGGGTGATCACCGCTAAGTATCCGTCCAAGAGTTTCAACGAGAGCCCAGTGTGTGAAGGGCGTCGGTCTTCTTCGTAA MKSIFVLFLFSALVSLSTQSTDSNDLKAPPSSAHARLANYGFPFGLLPSAVSSYTINETSGDFSLDLGDSCKFTLPPDNYVASFSRVVTGKIAKGRIHNLDGIRVRALFQWWSITGIRSTGEDLVFEVGVITAKYPSKSFNESPVCEGRRSSS Homology
BLAST of CmoCh10G006400 vs. ExPASy TrEMBL
Match: A0A6J1JBL6 (uncharacterized protein LOC111485298 OS=Cucurbita maxima OX=3661 GN=LOC111485298 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 9.9e-80 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CmoCh10G006400 vs. ExPASy TrEMBL
Match: A0A6J1H9T4 (uncharacterized protein LOC111461806 OS=Cucurbita moschata OX=3662 GN=LOC111461806 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 9.9e-80 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CmoCh10G006400 vs. ExPASy TrEMBL
Match: A0A0A0LTW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385550 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 1.3e-74 Identity = 143/153 (93.46%), Postives = 149/153 (97.39%), Query Frame = 0
BLAST of CmoCh10G006400 vs. ExPASy TrEMBL
Match: A0A5D3BM00 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00370 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 4.8e-74 Identity = 142/153 (92.81%), Postives = 148/153 (96.73%), Query Frame = 0
BLAST of CmoCh10G006400 vs. ExPASy TrEMBL
Match: A0A1S3CJ18 (uncharacterized protein LOC103501542 OS=Cucumis melo OX=3656 GN=LOC103501542 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 4.8e-74 Identity = 142/153 (92.81%), Postives = 148/153 (96.73%), Query Frame = 0
BLAST of CmoCh10G006400 vs. TAIR 10
Match: AT5G19590.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 177.6 bits (449), Expect = 7.8e-45 Identity = 88/147 (59.86%), Postives = 109/147 (74.15%), Query Frame = 0
BLAST of CmoCh10G006400 vs. TAIR 10
Match: AT4G02360.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 89.7 bits (221), Expect = 2.1e-18 Identity = 40/115 (34.78%), Postives = 66/115 (57.39%), Query Frame = 0
BLAST of CmoCh10G006400 vs. TAIR 10
Match: AT1G02813.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 89.0 bits (219), Expect = 3.7e-18 Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 0
BLAST of CmoCh10G006400 vs. TAIR 10
Match: AT1G02816.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17 Identity = 47/144 (32.64%), Postives = 75/144 (52.08%), Query Frame = 0
BLAST of CmoCh10G006400 vs. TAIR 10
Match: AT4G02370.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 85.9 bits (211), Expect = 3.1e-17 Identity = 43/140 (30.71%), Postives = 78/140 (55.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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