CmoCh05G013770 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G013770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Profilin
Location	Cmo_Chr05: 10670019 .. 10672845 (-)
RNA-Seq Expression	CmoCh05G013770
Synteny	CmoCh05G013770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAAAGAAAAAAGAGGGGTATTTAGGTAATTTTGGAATGGGAGATCGCAATTATTTTGGGAAAAATAATTATAACTGCGTGACATCAACGCTATCTCGGGCGAAACCGCGCTGTAAGAAGAGCAGAGAGGATTATTTGGTGGAGCTCATTTCGTCAGTGGACATAAATTGAATCTTCTCTCGATCGATTTAGCGCAGAAAAGAGTGAAGGAGAAAAAACCCTAAACTGATTGAACCAGAAGCAGGAGGAGGAAGAACAAGCGGGGAAAGATGTCGTGGCAAGTGTACGTCGACGATCATTTGATGTGCGATATTGAGGGCAATCACCTCTCATCTGCAGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGAAACTTTCCCCAAGGTTTACGCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTAATCTTTTACAGAAAATATGAAATCCGAGTATTGATTTGATTGACTGCTTGTTATCGATGGCTGGATCTGTCTGGATTTTTAATCCAAGATCTCGTGGTTCAGAGCATGATGAATATGATGGATTTTTTTTTTTAATCGTGGCTGATTTGATCTGATTGTTGTATGTCGATGCATGGCTTCGGGAGTCTCAAGGTTTAAATCGGTTGGTCGATGTAATTCTATGCAGTTTCGTTAGATGTGATTGAAATTAGAATCTGTTGTTGTTTCCATTTTGTTTAGATGTAGCGATTGTACGAGGCAGTAAAGATCTGGAGTTTTCTATTACCGTCATCTAGGGTTCTAGATTTACTTCGGAGCATTTCGATTTTATTCTCAATTATTTCTGTATTAGTTACGAAATGGTCAAGATGCTGTGCTGATTTCTCTTTAGACCGTCTTGATGATCGATTTCATATTGTGTATTTGATGGAATTCTTAGAAGAAGTCAAGGATGTTTGTCCTAACTTTCCTGGTTTCCTGTCCACTTTATGAGGTCCTCAATGCATGTTCCTACTTTTGTGGTTTGCAGTTCAAGCCTGAAGAAATTGCTGCCATCATGAATGACTTCAGTGAGCCCGGGACGCTTGCTCCAACTGGTTTGTATCTTGGTGGCTCAAAGTATATGGTAATCCAAGGGGAGCCTGGAGCTGTTATTCGTGGGAAGAAGGTAATAAAAAATTCAATGAAAATGTTCTATAATTAATTCTGAGTTCTGACTTTGAGAGATGATGGGCATGCAAGCAATTTATTCTGAAAGTGTTCTAAACTTAACTTTATAAGTTGCAATGAATATGAGAACCTTCATCCTAGATTAGTTTTCTAATTGGTCAGTGTTAAAAGTTTCTAAATTCATTATGTATTGGATTCTGCAGCAAAATTTGTTATCATGTTTACACTGCTTGGTGTATTTACCTTTGATCTGGCAATTAGATTCTCCTTTCCATTGAATTTTAAACCAATATATCTCTTGATTTTAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGGTCTGGCTCTAGTCATTGGCATCTATGATGAACCAATGACTCCTGGTCAGTGCAATATGATCGTTGAAAGGCTTGGGGATTATCTCGTCGACCAGGGTCTTTAAATATCGGTATGCTTGCTTGCTACCTTTGTATGCGATCGATCCTATTTCTTTTCAGCATCCATATTTCTCTTATTGCTGATACAATCTTTTGGATTGTTAATTGCTGCAGGGGAACCGCCTATTGTGTACAAGTCTATGGACTCTTGAATGAGTGGAAATGGGTTTGATTGATGCTTGAGGAGTGATGCTTATGTTTCTCGTTTTTAGTGTTGTCTCTTTCACTTTTTTGTTTGAAATATTGTGGTGGTTTTCAAGTGAGGTCCATTGTAGTAGCATCAAATATGGATATGGTAAACCATTCAGCATAAATTTATAAATACTCTTTTATTTTATCTGTTGATTTTTGCAGCAGGCTCCTGTATAACACGAGGAGATATAATTTCTCTCAAACCCAAATGTGGGCTGGTGGGACATTTCACTCCAGATAAATTTCTTTCCTTTTCTTCCCAATTACTTCTGCAGTTCTTGGTTTGGTTGCTTTTCAGTCTCTGGCAGATTATGCTAAATAGTTGGTATGTTGTTTCATTAATGGTTCGGGATAATTGCTGGCTTGCTGCCAGCCATGGTGACTCCATTAATCTTTACCTACGGCCTGTTGGTAGAGGGTAGGGTGGTTAGCAAACTATACCAGATGGTTGAGAATAGCAAATATTTCCATAGATTTACTCAATATTCACCATCACAAACCCACCACGGCCACAGGTAGTGGTAGGTAGCTACCGACCAAGAACTGTGGAGGTTTTAACTGTTCACATCAACCAGGCAAGTGGTGCTTTTGTGGATGGACTAATGGCATTCTTAGGTCTAAAAGTGGTGCCGAAGAATGAATGATTTTTCTTTGTTCAATGAAGGACTTTTAGGAAGGGGGATTGATTTTATAGTTAGAGCATGGAAGGATGATTTTCAATAGGACTAAGAATCTCTGAAGCAATATTTTGTGGTGGGGTTGGTGTTGCATTACTTCACATTGCCTAGAGATGATCATTTGTTATAAGGTCCAAACAGATTGCTATGGCTACTTTTGGACTCTGGAGCCCATGGATATCGAGGTTCTACAAGCGGTAATTCCTGATACTATGGTAAAAGGGGTAGTTTGAATGTGGGAGTTGTTCTTATTTTACTCAAAGGATTTGAAATAGTCCCCAATCTGTCTTTTTCAAGAACATTTCTTCCTAGGCCTCGGACTTCAAATTGTAAGGTGTTTCCAGGTGTTTCCATTGCATAAGAAAAAACTCAATTGGAT

mRNA sequence

AAGAAAAAGAAAAAAGAGGGGTATTTAGGTAATTTTGGAATGGGAGATCGCAATTATTTTGGGAAAAATAATTATAACTGCGTGACATCAACGCTATCTCGGGCGAAACCGCGCTGTAAGAAGAGCAGAGAGGATTATTTGGTGGAGCTCATTTCGTCAGTGGACATAAATTGAATCTTCTCTCGATCGATTTAGCGCAGAAAAGAGTGAAGGAGAAAAAACCCTAAACTGATTGAACCAGAAGCAGGAGGAGGAAGAACAAGCGGGGAAAGATGTCGTGGCAAGTGTACGTCGACGATCATTTGATGTGCGATATTGAGGGCAATCACCTCTCATCTGCAGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGAAACTTTCCCCAAGTTCAAGCCTGAAGAAATTGCTGCCATCATGAATGACTTCAGTGAGCCCGGGACGCTTGCTCCAACTGGTTTGTATCTTGGTGGCTCAAAGTATATGGTAATCCAAGGGGAGCCTGGAGCTGTTATTCGTGGGAAGAAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGGTCTGGCTCTAGTCATTGGCATCTATGATGAACCAATGACTCCTGGTCAGTGCAATATGATCGTTGAAAGGCTTGGGGATTATCTCGTCGACCAGGGTCTTTAAATATCGGGGAACCGCCTATTGTGTACAAGTCTATGGACTCTTGAATGAGTGGAAATGGGTTTGATTGATGCTTGAGGAGTGATGCTTATGTTTCTCGTTTTTAGTGTTGTCTCTTTCACTTTTTTGTTTGAAATATTGTGGTGGTTTTCAAGTGAGGTCCATTGTAGTAGCATCAAATATGGATATGGTAAACCATTCAGCATAAATTTATAAATACTCTTTTATTTTATCTGTTGATTTTTGCAGCAGGCTCCTGTATAACACGAGGAGATATAATTTCTCTCAAACCCAAATGTGGGCTGGTGGGACATTTCACTCCAGATAAATTTCTTTCCTTTTCTTCCCAATTACTTCTGCAGTTCTTGGTTTGGTTGCTTTTCAGTCTCTGGCAGATTATGCTAAATAGTTGGTATGTTGTTTCATTAATGGTTCGGGATAATTGCTGGCTTGCTGCCAGCCATGGTGACTCCATTAATCTTTACCTACGGCCTGTTGGTAGAGGGTAGGGTGGTTAGCAAACTATACCAGATGGTTGAGAATAGCAAATATTTCCATAGATTTACTCAATATTCACCATCACAAACCCACCACGGCCACAGGTAGTGGTAGGTAGCTACCGACCAAGAACTGTGGAGGTTTTAACTGTTCACATCAACCAGGCAAGTGGTGCTTTTGTGGATGGACTAATGGCATTCTTAGGTCTAAAAGTGGTGCCGAAGAATGAATGATTTTTCTTTGTTCAATGAAGGACTTTTAGGAAGGGGGATTGATTTTATAGTTAGAGCATGGAAGGATGATTTTCAATAGGACTAAGAATCTCTGAAGCAATATTTTGTGGTGGGGTTGGTGTTGCATTACTTCACATTGCCTAGAGATGATCATTTGTTATAAGGTCCAAACAGATTGCTATGGCTACTTTTGGACTCTGGAGCCCATGGATATCGAGGTTCTACAAGCGGTAATTCCTGATACTATGGTAAAAGGGGTAGTTTGAATGTGGGAGTTGTTCTTATTTTACTCAAAGGATTTGAAATAGTCCCCAATCTGTCTTTTTCAAGAACATTTCTTCCTAGGCCTCGGACTTCAAATTGTAAGGTGTTTCCAGGTGTTTCCATTGCATAAGAAAAAACTCAATTGGAT

Coding sequence (CDS)

ATGTCGTGGCAAGTGTACGTCGACGATCATTTGATGTGCGATATTGAGGGCAATCACCTCTCATCTGCAGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGAAACTTTCCCCAAGTTCAAGCCTGAAGAAATTGCTGCCATCATGAATGACTTCAGTGAGCCCGGGACGCTTGCTCCAACTGGTTTGTATCTTGGTGGCTCAAAGTATATGGTAATCCAAGGGGAGCCTGGAGCTGTTATTCGTGGGAAGAAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGGTCTGGCTCTAGTCATTGGCATCTATGATGAACCAATGACTCCTGGTCAGTGCAATATGATCGTTGAAAGGCTTGGGGATTATCTCGTCGACCAGGGTCTTTAA

Protein sequence

MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVERLGDYLVDQGL

Homology

[Close]

BLAST of CmoCh05G013770 vs. ExPASy Swiss-Prot
Match: O82572 (Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.3e-66
Identity = 116/131 (88.55%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC+IEGNHL+SAAIIG DGSVWAQS TFP+FKPEEI AIMNDF+EPG+L
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYL G+KYMVIQGEPGAVIRGKKGPGGVTVKKT  AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of CmoCh05G013770 vs. ExPASy Swiss-Prot
Match: Q5XWE1 (Profilin OS=Citrullus lanatus OX=3654 PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 5.1e-66
Identity = 115/131 (87.79%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC+IEGNHL+SAAIIG DGSVWA+SE FP+ KPEEI  I+NDF+EPGTL
Sbjct: 1   MSWQAYVDDHLMCEIEGNHLTSAAIIGQDGSVWAKSENFPQLKPEEITGILNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLY+GGSKYMVIQGEPGAVIRGKKGPGGVTVKKT LALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYIGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTALALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL++QGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of CmoCh05G013770 vs. ExPASy Swiss-Prot
Match: Q8GT39 (Profilin OS=Prunus persica OX=3760 PE=1 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.1e-65
Identity = 114/131 (87.02%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC+IEGNHLS+AAIIGHDGSVWAQS TFP+ KPEE+  I+NDF+EPG+L
Sbjct: 1   MSWQAYVDDHLMCEIEGNHLSAAAIIGHDGSVWAQSATFPQLKPEEVTGILNDFNEPGSL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKK+ LAL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKSTLALLIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYLV+QGL
Sbjct: 121 RLGDYLVEQGL 131

[Close]

BLAST of CmoCh05G013770 vs. ExPASy Swiss-Prot
Match: Q5FX67 (Profilin OS=Cucumis melo OX=3656 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.0e-65
Identity = 112/131 (85.50%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVD+HLMC+IEGNHL+SAAIIG DGSVWAQS+ FP+ KPEE+A I+ DF++PGTL
Sbjct: 1   MSWQVYVDEHLMCEIEGNHLTSAAIIGQDGSVWAQSQNFPQLKPEEVAGIVGDFADPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLY+GG+KYMVIQGEPGAVIRGKKGPGG TVKKTG+ALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYIGGTKYMVIQGEPGAVIRGKKGPGGATVKKTGMALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of CmoCh05G013770 vs. ExPASy Swiss-Prot
Match: O65809 (Profilin-1 OS=Glycine max OX=3847 GN=PRO1 PE=1 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.3e-65
Identity = 113/130 (86.92%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHL+CDIEGNHL+ AAIIG DGSVWAQS  FP+FKPEEI AIMNDF+EPG+L
Sbjct: 1   MSWQAYVDDHLLCDIEGNHLTHAAIIGQDGSVWAQSTDFPQFKPEEITAIMNDFNEPGSL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKTG AL+IGIYDEPMTPGQCNM+VE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAALIIGIYDEPMTPGQCNMVVE 120

Query: 121 RLGDYLVDQG 131
           R GDYL+DQG
Sbjct: 121 RPGDYLIDQG 130

[Close]

BLAST of CmoCh05G013770 vs. ExPASy TrEMBL
Match: A0A6J1G2P2 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111450248 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.5e-71
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYLVDQGL
Sbjct: 121 RLGDYLVDQGL 131

[Close]

BLAST of CmoCh05G013770 vs. ExPASy TrEMBL
Match: A0A6J1KK00 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111493872 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.7e-70
Identity = 129/131 (98.47%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHL+SAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDF+EPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYLVDQGL
Sbjct: 121 RLGDYLVDQGL 131

[Close]

BLAST of CmoCh05G013770 vs. ExPASy TrEMBL
Match: A0A6J1DKC9 (Profilin OS=Momordica charantia OX=3673 GN=LOC111021891 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.3e-66
Identity = 119/131 (90.84%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMC+IEGNHL+S+AIIGHDGSVWAQS  FP FKPEEI+AIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPFKPEEISAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKT +AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTSMALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of CmoCh05G013770 vs. ExPASy TrEMBL
Match: A0A6J1HSG7 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111465722 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.2e-65
Identity = 118/131 (90.08%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSW VYVDDHLMCDIEGNHL+SAAIIGHDGSVWAQS++FP+FKPEEI AIMNDF+EPG L
Sbjct: 1   MSWNVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSDSFPQFKPEEITAIMNDFNEPGVL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKT LAL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTSLALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL++QGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of CmoCh05G013770 vs. ExPASy TrEMBL
Match: A0A1R3IJL8 (Profilin OS=Corchorus capsularis OX=210143 GN=CCACVL1_11776 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.5e-65
Identity = 117/131 (89.31%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC+IEGNHL++AAIIGHDGSVWAQS  FP+FKPEEI  IMNDF+EPGTL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTAAAIIGHDGSVWAQSSNFPQFKPEEITGIMNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKTG A++IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAAMIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYLVDQGL
Sbjct: 121 RLGDYLVDQGL 131

[Close]

BLAST of CmoCh05G013770 vs. NCBI nr
Match: XP_022946037.1 (profilin-1 [Cucurbita moschata] >XP_022946038.1 profilin-1 [Cucurbita moschata])

HSP 1 Score: 276.6 bits (706), Expect = 1.1e-70
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYLVDQGL
Sbjct: 121 RLGDYLVDQGL 131

[Close]

BLAST of CmoCh05G013770 vs. NCBI nr
Match: XP_023546560.1 (profilin-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.4 bits (703), Expect = 2.5e-70
Identity = 130/131 (99.24%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDF+EPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYLVDQGL
Sbjct: 121 RLGDYLVDQGL 131

[Close]

BLAST of CmoCh05G013770 vs. NCBI nr
Match: KAG7030463.1 (Profilin-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275.0 bits (702), Expect = 3.3e-70
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYLVDQG
Sbjct: 121 RLGDYLVDQG 130

[Close]

BLAST of CmoCh05G013770 vs. NCBI nr
Match: XP_022999543.1 (profilin-1 [Cucurbita maxima])

HSP 1 Score: 274.2 bits (700), Expect = 5.7e-70
Identity = 129/131 (98.47%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHL+SAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDF+EPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYLVDQGL
Sbjct: 121 RLGDYLVDQGL 131

[Close]

BLAST of CmoCh05G013770 vs. NCBI nr
Match: XP_022154695.1 (profilin-1 [Momordica charantia])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 119/131 (90.84%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMC+IEGNHL+S+AIIGHDGSVWAQS  FP FKPEEI+AIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPFKPEEISAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKT +AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTSMALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of CmoCh05G013770 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-58
Identity = 100/131 (76.34%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMCD+ GN L++AAI+G DGSVWAQS  FP+ KPEEI  I +DF+ PGTL
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGL+LGG+KYMVIQGEP AVIRGKKG GGVT+KKT LALV GIYDEPMTPGQCNM+VE
Sbjct: 98  APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVE 157

Query: 121 RLGDYLVDQGL 132
            LG+YL++ GL
Sbjct: 158 NLGEYLIESGL 168

[Close]

BLAST of CmoCh05G013770 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 219.9 bits (559), Expect = 1.2e-57
Identity = 97/134 (72.39%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDI---EGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEP 60
           MSWQ YVD+HLMCD+   +G+HL++AAIIGHDGSVWAQS  FP+FKP+EI  IM DF EP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNM 120
           G LAPTG++L G KYMVIQGEP AVIRGKKG GG+T+KKTG ++V G+Y+EP+TPGQCNM
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 121 IVERLGDYLVDQGL 132
           +VERLGDYL++QGL
Sbjct: 121 VVERLGDYLIEQGL 134

[Close]

BLAST of CmoCh05G013770 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 219.2 bits (557), Expect = 2.0e-57
Identity = 99/131 (75.57%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMCD+EGNHL++AAI+G DGSVWAQS  FP+ KP+EI  I  DF EPG L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGL+LGG KYMVIQGE GAVIRGKKGPGGVT+KKT  ALV G YDEPMT GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL++  L
Sbjct: 121 RLGDYLIESEL 131

[Close]

BLAST of CmoCh05G013770 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 218.0 bits (554), Expect = 4.5e-57
Identity = 99/131 (75.57%), Postives = 110/131 (83.97%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC++EGNHL+ AAI G DGSVWAQS  FP+ KP EIA I  DF E G L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNMIVE 120
           APTGL+LGG KYMV+QGE GAVIRGKKGPGGVT+KKT  ALV GIYDEPMT GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL++ GL
Sbjct: 121 RLGDYLIESGL 131

[Close]

BLAST of CmoCh05G013770 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 217.2 bits (552), Expect = 7.6e-57
Identity = 96/134 (71.64%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDI---EGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEP 60
           MSWQ YVD+HLMCD+   +G+HL++AAI+GHDGSVWAQS  FP+FK +E + IM DF EP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALVIGIYDEPMTPGQCNM 120
           G LAPTGL++ G+KYMVIQGEPGAVIRGKKG GG+T+KKTG + V GIY+EP+TPGQCNM
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 121 IVERLGDYLVDQGL 132
           +VERLGDYL++QGL
Sbjct: 121 VVERLGDYLLEQGL 134

The following BLAST results are available for this feature:

BLAST of CmoCh05G013770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82572	2.3e-66	88.55	Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1	[more]
Q5XWE1	5.1e-66	87.79	Profilin OS=Citrullus lanatus OX=3654 PE=1 SV=1	[more]
Q8GT39	1.1e-65	87.02	Profilin OS=Prunus persica OX=3760 PE=1 SV=1	[more]
Q5FX67	2.0e-65	85.50	Profilin OS=Cucumis melo OX=3656 PE=1 SV=1	[more]
O65809	3.3e-65	86.92	Profilin-1 OS=Glycine max OX=3847 GN=PRO1 PE=1 SV=1	[more]

BLAST of CmoCh05G013770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2P2	5.5e-71	100.00	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111450248 PE=3 SV=1	[more]
A0A6J1KK00	2.7e-70	98.47	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111493872 PE=3 SV=1	[more]
A0A6J1DKC9	5.3e-66	90.84	Profilin OS=Momordica charantia OX=3673 GN=LOC111021891 PE=3 SV=1	[more]
A0A6J1HSG7	1.2e-65	90.08	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111465722 PE=3 SV=1	[more]
A0A1R3IJL8	3.5e-65	89.31	Profilin OS=Corchorus capsularis OX=210143 GN=CCACVL1_11776 PE=3 SV=1	[more]

BLAST of CmoCh05G013770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946037.1	1.1e-70	100.00	profilin-1 [Cucurbita moschata] >XP_022946038.1 profilin-1 [Cucurbita moschata]	[more]
XP_023546560.1	2.5e-70	99.24	profilin-1 [Cucurbita pepo subsp. pepo]	[more]
KAG7030463.1	3.3e-70	100.00	Profilin-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022999543.1	5.7e-70	98.47	profilin-1 [Cucurbita maxima]	[more]
XP_022154695.1	1.1e-65	90.84	profilin-1 [Momordica charantia]	[more]

BLAST of CmoCh05G013770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56600.1	1.4e-58	76.34	profilin 3	[more]
AT2G19770.1	1.2e-57	72.39	profilin 5	[more]
AT2G19760.1	2.0e-57	75.57	profilin 1	[more]
AT4G29350.1	4.5e-57	75.57	profilin 2	[more]
AT4G29340.1	7.6e-57	71.64	profilin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 27..40 score: 82.21 coord: 84..99 score: 78.07 coord: 104..117 score: 92.08 coord: 52..66 score: 75.52 coord: 117..130 score: 80.65 coord: 1..14 score: 84.42 coord: 71..80 score: 96.73
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 40..60 score: 54.4 coord: 3..12 score: 72.0 coord: 21..30 score: 67.0 coord: 113..130 score: 69.44 coord: 100..113 score: 69.46 coord: 64..78 score: 69.0
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..131 e-value: 2.3E-60 score: 216.5
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..130 e-value: 6.9E-42 score: 142.6
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..131
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..130 e-value: 3.83011E-58 score: 174.436
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..131 e-value: 3.5E-56 score: 190.9
None	No IPR available	PANTHER	PTHR11604:SF29	PROFILIN	coord: 1..131
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G013770.1	CmoCh05G013770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding