CmoCh05G008670 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGATTGGAATGGAGGAAGTTTGGAGCGAAGAAAACTCCGCCTATACATAGCCAACCAGGTCCACTCACCTCCAAATTCCTTCTTTTTTTAGGTTTTTGTGGAATCTTGTACAAAACACGGACTTACCCATCTTCAATTTTCCTTTCCATTCCGCACCTAACGCGTTTTCTCTTCCTCTTCCACCTTTCTTTTTCCTTTTCTCCTTCATTTTTTGTCTTCTCAATTCACTCTATTCCTCTTCTTTCTAGTTTCATCCCTGCAATTCTTACCATTCGCCTCTGTAGGGTTTCTTTCTTTTCTTGAATTGATCGCCTGAGTTGGGTTTTTGGTGATATAGGGGTTTTGAGGACAATGAGCGATCATCTTGTCCTGTATGTTGACCATTTGATTCCACCAGTTGCTCCAGTTCAACCTGTGTCCGACCCGGTTGACCCGGTTCCTTCCGCACCGCGTGAGGGTGTTTCTGACTCGGCTGCGGCTATTCCTTCCTGTTCTACTGCCACTGCGGATGATCGGACGGTGGAGCAGGATGCACCCAATGAGGAGGACCCTCTGATTCAGGCGGCGGAGTGTCGCATTTGTCAGGAAGAAGACACACTCAATAATTTAGAAACTCCCTGCGCATGTAGTGGTAGTCTTAAGGTATTGACGCCTCACCCTTTTCTGTTGCTTCTTAAATTTTTACGTGAATACACAGGGGACACCCTTTTACCGTAGTTTGTTGATTTGACTCTGTTTTCTTTCATGGCGTTGGATTTATGAATGCTGTTTTTGCTGAATTGGAAACTTCGGATATAGTTCTTTCATACTGGTTCATTTGGGTTTAGTAACTTTCTTCTTTTTACTGTCTTTGGAATGGGTTCAAGTCTATGTTTATTGCTTTGATTTTTGTTTTTTTTTGGTCAATTTTTGTGTTGCTTCCAATGTGGTTTAGTTTTCGCGGAAGCAAGCTGGAAAAGGACATAAAATAATAAGTTTATCTAGTATTTTCCAAAACTGTGATGTATGAGAGTTTGCCTGAATTTTACAGTGTCTTGTTGAGAATTGACATGCTCATATCTTGAGAGGATTTATATCGTTGATGTGGGGAGGATTTTTGTGTTGTTTGGTGGTCATTTGTTTTACTCTTTGTTTGGTCAATTGAATATTTCTTTATAAAATTTTCCCCAATGCTTCGTTTGTGATGTTTAATATCATCTCTCGTCTAATAGTTTCGTCATAAGAGTAACGCTTTTGCCTAAACTCTTCTGTTTGCATAAATTTCTATGATCGATGGCCAATTTTATGAGCTGTATGTGGGGGTATGTGCTGTGTCTGAGTTATAAAGTGGCTTGATAAAATTTGACACGAATTATGGTTATCATTCATGATGTCATGGTAGAATTATAGTGATCCATGAACTCTATCTTTTTTTTCTCTCCAGAATGTAACTAAGTTTGGTTATGCCCTTAGAATTGACCAATATGATCTAGTATAGGAAAATTTATCGGGCGTGCTTGTTTATTAATCTTTTGGCACGTGTCTGATGAATGTTTGTGTTCAGTATGCTCATAGGAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGACATAACTTGTGAGATATGTCATCAGGTATGCATGATGTTTTGATTTGATATTCGGCTATTATAGTATTATTTTGTAAAAAAATTTCAAATAAGTTGCTAATATTATCTTTATTCTTTAGCTTCCGTGCAAGTTTTCCTCCTACTATATTTTTGTTGAACTCATTACTCTTTGAATTTTGAAAAAAGGCATGCTTTACACCGGTAGTTCAAAATTTTCATTATTAGTGATTTAAAATGTGCATAAAAAATGAACGCGTACGAATGAGAGGGAGAAAACCATATGATTCGCAATTTGCTAGGGTTGCTGTTGTAGGAGAAAACTGTAGGACTCGAGAACGAGACTTTGCTACTTTAGAAACCTCGTGGATGATTGGAGACTCTTGCCCGTTTACTTCTCTTCGTACTTGTCTGATTGCCTCTACTCTCGACCAGTCTCTTTTGTCTATCCTCTCCGAGCCATACCTTTTGTTCGTCTTTTCCTTTGATACATCCATCTCTGAGAAAAGCATAACAGTGGTCAGTGGTTTACTATAGCGCACACAATGATTTGGATCTTTTTGCAATGGGCTGGATTCCTTTTTGGATAGTTTGAATCTGACATCATAGAAGATTGTTCCAAGTCCTTGAGGAGAAGATGGGCAGCATGTCAATTGGTGGATTCTTCCCTTCCTCATGCTCAACCAAAAGTAATGTGGATGCTACTTCGAATATGCTGTCTGTCAGAGATGGTAGAGGTAAGGAGTGTCTACCATGAAGATGCAGGTTCATTAGTGTTGAAGTGTGATGATGGATGAGGCATTGGTATCAAGGGAGGCATTGATGTTTCCTCAGACTTATGTCTTAAGACATATCTCTCGCTGTTGGAACTTCGTTTGTTAAATGAAAAGTTGGTTCGATGTTTTAGTCTTTCCAAATTTTGAGCGTGGGGCTCTCAATTCAGGACATTGGACTCTTTTTTCTGCTCTGTCTGTGATTCTTTCCCCTTTATCTTTACGTGTTTCATGTTATGTTGAATGGTATCAATATCATGTGATTTTCATTTGCAGTTTCTTTTCTGATGATGTTTTTCTTGTTTCAATTCCTCATTGATTGATATTCCGGTACGCTTTATTCAATTGCCAGTCTTATCAACCTGGATATACTGCACCCCCTCGTTCTGAAGAAACTGTGATTGATATGGAGTAAGTTCAACCTTCTTGTTATTTGCAATTTGCATGTGAATGACTTTATCAATAATCATGCATCTGAACACCCACAACCGTTTTATTTTCATGTAATTTGTACACGCATTTGAAATATTGACCTGGATGTGGATATGCACAGGGGACGATGGACTATCGCTGGTAACCCGTTAGACCTTAGAGATACTCGGCTACTGGCCATTGCGGAGGCAGAACGTAATTTCTTGGAAGCTGAGTATGATGATTATGCTGCTTCAAATGATAGTGGAGCTGCATTTTGCCGATCAGCTGCCCTTATTGTAAGTTTTCTTATGTTAATTCGTAGAACTCTTGTATTTTCCATGAAACTCTGATGATTGATGAAGTATTTGATTTTACTGGCTAGCTATTAGCCCTTCTCCTTCTGCGACACGCATTGACCATAACTGATCCAGACGGTGATGATGACGCATCTGCCTTTTTCTCTGTAAGCGAGATGGGAATTCGTTTTCTTAAATTTGAAAGAACAATAGTATAATCGGAAGGATATTTATAATCTGGATGTACCTTTGACAGATTTTCTTGCTTCGTGCTGCTGGTTTTCTTCTACCATGCTACATCATGGCTTGGGCCATCAGTATCCTGCAACGTCGTCGACAAAGACAGGTTGGTTGGCGATTAAGTTCTTTGGGTGTATTTTTGAAAATTCTCTCTTAACAACTGTAGGTGTTGCCATCTCTTAAATAAGTAGATATTTTGGCATATATTGTAGAAAGCAAGGATGTTTGTGTAGGGGGTAGGCAAAATTGTTGGTCTTTAAGAATGTTGTTGACACTTAAAAGTGTGGTGGTTGTGAACCAACAGGAGGCGGCAGCACTGGCTGCAACACAAGTGGCGTTTGTGCTACAACATGGACAGCATAGAGGTTTACAATTTGCAATTGCATCAGCAGGACCGCCCCTCACCCCTCACCCACACCCACACCCACACCCACACCCTCACCCTCACCCTCACCCTCACCCACACCCACACCCACACCCACACCCACACCCTCACCCTCACCCTCACCCCCACCCCCACCCCCACCCCCACCCACACCCTCACCCTGCTGTTTGA GGATTGGAATGGAGGAAGTTTGGAGCGAAGAAAACTCCGCCTATACATAGCCAACCAGGGGTTTTGAGGACAATGAGCGATCATCTTGTCCTGTATGTTGACCATTTGATTCCACCAGTTGCTCCAGTTCAACCTGTGTCCGACCCGGTTGACCCGGTTCCTTCCGCACCGCGTGAGGGTGTTTCTGACTCGGCTGCGGCTATTCCTTCCTGTTCTACTGCCACTGCGGATGATCGGACGGTGGAGCAGGATGCACCCAATGAGGAGGACCCTCTGATTCAGGCGGCGGAGTGTCGCATTTGTCAGGAAGAAGACACACTCAATAATTTAGAAACTCCCTGCGCATGTAGTGGTAGTCTTAAGTATGCTCATAGGAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGACATAACTTGTGAGATATGTCATCAGTCTTATCAACCTGGATATACTGCACCCCCTCGTTCTGAAGAAACTGTGATTGATATGGAGGGACGATGGACTATCGCTGGTAACCCGTTAGACCTTAGAGATACTCGGCTACTGGCCATTGCGGAGGCAGAACGTAATTTCTTGGAAGCTGAGTATGATGATTATGCTGCTTCAAATGATAGTGGAGCTGCATTTTGCCGATCAGCTGCCCTTATTCTATTAGCCCTTCTCCTTCTGCGACACGCATTGACCATAACTGATCCAGACGGTGATGATGACGCATCTGCCTTTTTCTCTATTTTCTTGCTTCGTGCTGCTGGTTTTCTTCTACCATGCTACATCATGGCTTGGGCCATCAGTATCCTGCAACGTCGTCGACAAAGACAGGAGGCGGCAGCACTGGCTGCAACACAAGTGGCGTTTGTGCTACAACATGGACAGCATAGAGGTTTACAATTTGCAATTGCATCAGCAGGACCGCCCCTCACCCCTCACCCACACCCACACCCACACCCACACCCTCACCCTCACCCTCACCCTCACCCACACCCACACCCACACCCACACCCACACCCTCACCCTCACCCTCACCCCCACCCCCACCCCCACCCCCACCCACACCCTCACCCTGCTGTTTGA ATGAGCGATCATCTTGTCCTGTATGTTGACCATTTGATTCCACCAGTTGCTCCAGTTCAACCTGTGTCCGACCCGGTTGACCCGGTTCCTTCCGCACCGCGTGAGGGTGTTTCTGACTCGGCTGCGGCTATTCCTTCCTGTTCTACTGCCACTGCGGATGATCGGACGGTGGAGCAGGATGCACCCAATGAGGAGGACCCTCTGATTCAGGCGGCGGAGTGTCGCATTTGTCAGGAAGAAGACACACTCAATAATTTAGAAACTCCCTGCGCATGTAGTGGTAGTCTTAAGTATGCTCATAGGAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGACATAACTTGTGAGATATGTCATCAGTCTTATCAACCTGGATATACTGCACCCCCTCGTTCTGAAGAAACTGTGATTGATATGGAGGGACGATGGACTATCGCTGGTAACCCGTTAGACCTTAGAGATACTCGGCTACTGGCCATTGCGGAGGCAGAACGTAATTTCTTGGAAGCTGAGTATGATGATTATGCTGCTTCAAATGATAGTGGAGCTGCATTTTGCCGATCAGCTGCCCTTATTCTATTAGCCCTTCTCCTTCTGCGACACGCATTGACCATAACTGATCCAGACGGTGATGATGACGCATCTGCCTTTTTCTCTATTTTCTTGCTTCGTGCTGCTGGTTTTCTTCTACCATGCTACATCATGGCTTGGGCCATCAGTATCCTGCAACGTCGTCGACAAAGACAGGAGGCGGCAGCACTGGCTGCAACACAAGTGGCGTTTGTGCTACAACATGGACAGCATAGAGGTTTACAATTTGCAATTGCATCAGCAGGACCGCCCCTCACCCCTCACCCACACCCACACCCACACCCACACCCTCACCCTCACCCTCACCCTCACCCACACCCACACCCACACCCACACCCACACCCTCACCCTCACCCTCACCCCCACCCCCACCCCCACCCCCACCCACACCCTCACCCTGCTGTTTGA MSDHLVLYVDHLIPPVAPVQPVSDPVDPVPSAPREGVSDSAAAIPSCSTATADDRTVEQDAPNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQSYQPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRLLAIAEAERNFLEAEYDDYAASNDSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPHPHPHPHPHPHPHPHPHPHPHPHPHPHPHPHPHPHPHPHPHPHPHPAV Homology
BLAST of CmoCh05G008670 vs. ExPASy Swiss-Prot
Match: Q8MP30 (Uncharacterized histidine-rich protein DDB_G0274557 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274557 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-08 Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0
BLAST of CmoCh05G008670 vs. ExPASy TrEMBL
Match: A0A6J1G4K7 (uncharacterized protein LOC111450687 OS=Cucurbita moschata OX=3662 GN=LOC111450687 PE=4 SV=1) HSP 1 Score: 645.6 bits (1664), Expect = 1.1e-181 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmoCh05G008670 vs. ExPASy TrEMBL
Match: A0A6J1I5Y1 (uncharacterized protein LOC111471364 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471364 PE=4 SV=1) HSP 1 Score: 583.6 bits (1503), Expect = 5.4e-163 Identity = 298/304 (98.03%), Postives = 301/304 (99.01%), Query Frame = 0
BLAST of CmoCh05G008670 vs. ExPASy TrEMBL
Match: A0A6J1IBB6 (uncharacterized protein LOC111471364 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471364 PE=4 SV=1) HSP 1 Score: 580.9 bits (1496), Expect = 3.5e-162 Identity = 296/302 (98.01%), Postives = 299/302 (99.01%), Query Frame = 0
BLAST of CmoCh05G008670 vs. ExPASy TrEMBL
Match: A0A6J1CTP2 (uncharacterized protein LOC111014120 OS=Momordica charantia OX=3673 GN=LOC111014120 PE=4 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 3.3e-152 Identity = 275/295 (93.22%), Postives = 285/295 (96.61%), Query Frame = 0
BLAST of CmoCh05G008670 vs. ExPASy TrEMBL
Match: A0A6J1G9V2 (uncharacterized protein LOC111452273 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452273 PE=4 SV=1) HSP 1 Score: 538.5 bits (1386), Expect = 2.0e-149 Identity = 274/299 (91.64%), Postives = 282/299 (94.31%), Query Frame = 0
BLAST of CmoCh05G008670 vs. NCBI nr
Match: XP_022946694.1 (uncharacterized protein LOC111450687 [Cucurbita moschata]) HSP 1 Score: 645.6 bits (1664), Expect = 2.4e-181 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmoCh05G008670 vs. NCBI nr
Match: XP_023547303.1 (uncharacterized protein LOC111806165 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 629.4 bits (1622), Expect = 1.8e-176 Identity = 324/327 (99.08%), Postives = 325/327 (99.39%), Query Frame = 0
BLAST of CmoCh05G008670 vs. NCBI nr
Match: KAG6598983.1 (putative apyrase 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 607.8 bits (1566), Expect = 5.5e-170 Identity = 308/309 (99.68%), Postives = 308/309 (99.68%), Query Frame = 0
BLAST of CmoCh05G008670 vs. NCBI nr
Match: KAG7029952.1 (E3 ubiquitin-protein ligase MARCH3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 584.7 bits (1506), Expect = 5.0e-163 Identity = 313/378 (82.80%), Postives = 315/378 (83.33%), Query Frame = 0
BLAST of CmoCh05G008670 vs. NCBI nr
Match: XP_022972852.1 (uncharacterized protein LOC111471364 isoform X1 [Cucurbita maxima]) HSP 1 Score: 583.6 bits (1503), Expect = 1.1e-162 Identity = 298/304 (98.03%), Postives = 301/304 (99.01%), Query Frame = 0
BLAST of CmoCh05G008670 vs. TAIR 10
Match: AT3G47550.3 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 310.8 bits (795), Expect = 1.3e-84 Identity = 173/297 (58.25%), Postives = 213/297 (71.72%), Query Frame = 0
BLAST of CmoCh05G008670 vs. TAIR 10
Match: AT3G47550.6 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 310.8 bits (795), Expect = 1.3e-84 Identity = 173/297 (58.25%), Postives = 213/297 (71.72%), Query Frame = 0
BLAST of CmoCh05G008670 vs. TAIR 10
Match: AT2G02960.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 304.7 bits (779), Expect = 9.2e-83 Identity = 159/225 (70.67%), Postives = 182/225 (80.89%), Query Frame = 0
BLAST of CmoCh05G008670 vs. TAIR 10
Match: AT2G02960.4 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 304.7 bits (779), Expect = 9.2e-83 Identity = 159/225 (70.67%), Postives = 182/225 (80.89%), Query Frame = 0
BLAST of CmoCh05G008670 vs. TAIR 10
Match: AT2G02960.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 304.7 bits (779), Expect = 9.2e-83 Identity = 159/225 (70.67%), Postives = 182/225 (80.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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