CmoCh04G028180 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G028180
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr04: 20201343 .. 20203259 (-)
RNA-Seq ExpressionCmoCh04G028180
SyntenyCmoCh04G028180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCGAATTCCCGCTTCGAATCTCACCAAACTCTCGAAGCCCTTCGTCTTCCTCGCTTCAATTCCCAAGTCAAATTTCTCTTCTGCTTCATCCTCAACATTTTTACCATCAATTCCTCGGTCCGAAACTAAATTAATCGTCAACCCTCTTTACCATTTTCTCCCACAAAACCAAAACCCCTTCAACATCGTCGAACTCGTCTCCTCGCACCTCAAAACCAGCAACACAAACTTATCCCTTCTTCAATCCGACATTAAGGAGCTTCTTCCTCACTTGGGTCATCGTGAAGTCTCCAAGATTATATTGAGGTGCCAATCTAATTTCGTCTCTGTTCTTGCTTTTTTCAATTGGGTTAAATTTGATTTGGGGATTACACTTAGTTCTCAAAACTATTGTCTTATTATCCATATATTAGCATGGTCCCGACAATTTTCCATGGCGATGAAATTCTTGTCTGAATTGATTGAGTTGTCTAAGGATAATGCCTCAGGTAGTGAGGATGTTTTTCATAATCTGGTATTGTGCACTGAGCACTGTAATTGGAATCCTGTTATCTTTGAAATGCTTATTAAGGCGTATGTGAAAGTTCATATGATTCAGGAAAGTTATGAGAGCTTTAAGAAGATGGTGAAGATGGGTTTTGTTCCAAGTGTGATTGCTTGTAATTGTATTCTAAATGGACTGGCGAAGATGAAGTGTGATGCTCAATGTTGGGAACTCTATGAAGAAATGGGAAGGATTGGAGTTCACTCAAATGCATATACTTTTAATATTTTGACTTATGTTTTGTGTAGAGTTGGGGATGTGAATAAGGTTAATGAGTTCTTAGAAAAGATGGAAGAAGAGGGTTTCGATCCCGACGTCGTGACGTACAATACTTTGATCAATAGCTATTGTCGAAGAGGAAGATTAGATGATGCATTCTATTTATATAGGATAATGTTTAGAAGGGGTGTGATGCCCGATCTTGTTTCATATACTTCCTTGATGAATGGTCTTTGTAAGTTAGGAAGGGTAAGAGAGGCCCATCAGCTATTTCATCGAATGATCGATCGAGAATTGGATCCCGATGTCGTATTGTATAATACGCTAATTAATGCATATTGCAAGGATGGAAGGCTGCAAGAGGCAAGATCATTGCTACACGATATGACTCGAATTGGCATTTGCCCTGATAGTTTCACTTGTAGGATTATGGTGGAAGGATATGGAAGAGGAGGTAGGTTGATCTCAGCTTTGAATTTGGTTGTCGAACTTCGGAAACTTGGAACGATTGTTACTTACGAGATATATGATTATCTTATCGTGTCGTTGTGTCTGGAAGATCGTCCATTTGCAGCTAAGAGTGTTCTTGAAAGAATCATTAAAGATGGTTTCCAACCTAATGCTTGTATCTACAACAAGCTGATTGAATCTTTCTGCAGAGTTCATAATGTTTCTGAAGCACTGCTTTTGAAATCTGAAATGGTAAAGAGAAATTTTAAACTTAGCATTGATTCATACAAGCCTCTTATATCCTGTTTGTGTGGAATCAATAGAAGTGTAGATGGTGAAGGTTTAATGGTAGAAATGGTTGAATCTGGAGTGCTTCCGGATCATCAAATATGCAGAGTATTGATAAATGGATACTGCAAAGAAGGGAATGTTTATAAAGCAGAATCATTATTGGTATCATTTGCTAAAGATTTTGAGTTCTTTGACACTGAAAGTTTCAATGCCTTGGTTAAATTTCATCGCGATTTTGGTAATGAAACGGAGTTGATGCAGCTACAAGATCGAATGCTGAAAGTCGGTTTCGTTCCGAATAGCTTAACGTGCCGATACGTTATCCATGGATTATGGAAATCTGCAAGGCTCGACAAGAGGAGAGTTCAGGCTCCTCTTTGCCAAAGAGGGCGACATATAGATATGTGA

mRNA sequence

ATGCATCGAATTCCCGCTTCGAATCTCACCAAACTCTCGAAGCCCTTCGTCTTCCTCGCTTCAATTCCCAAGTCAAATTTCTCTTCTGCTTCATCCTCAACATTTTTACCATCAATTCCTCGGTCCGAAACTAAATTAATCGTCAACCCTCTTTACCATTTTCTCCCACAAAACCAAAACCCCTTCAACATCGTCGAACTCGTCTCCTCGCACCTCAAAACCAGCAACACAAACTTATCCCTTCTTCAATCCGACATTAAGGAGCTTCTTCCTCACTTGGGTCATCGTGAAGTCTCCAAGATTATATTGAGGTGCCAATCTAATTTCGTCTCTGTTCTTGCTTTTTTCAATTGGGTTAAATTTGATTTGGGGATTACACTTAGTTCTCAAAACTATTGTCTTATTATCCATATATTAGCATGGTCCCGACAATTTTCCATGGCGATGAAATTCTTGTCTGAATTGATTGAGTTGTCTAAGGATAATGCCTCAGGTAGTGAGGATGTTTTTCATAATCTGGTATTGTGCACTGAGCACTGTAATTGGAATCCTGTTATCTTTGAAATGCTTATTAAGGCGTATGTGAAAGTTCATATGATTCAGGAAAGTTATGAGAGCTTTAAGAAGATGGTGAAGATGGGTTTTGTTCCAAGTGTGATTGCTTGTAATTGTATTCTAAATGGACTGGCGAAGATGAAGTGTGATGCTCAATGTTGGGAACTCTATGAAGAAATGGGAAGGATTGGAGTTCACTCAAATGCATATACTTTTAATATTTTGACTTATGTTTTGTGTAGAGTTGGGGATGTGAATAAGGTTAATGAGTTCTTAGAAAAGATGGAAGAAGAGGGTTTCGATCCCGACGTCGTGACGTACAATACTTTGATCAATAGCTATTGTCGAAGAGGAAGATTAGATGATGCATTCTATTTATATAGGATAATGTTTAGAAGGGGTGTGATGCCCGATCTTGTTTCATATACTTCCTTGATGAATGGTCTTTGTAAGTTAGGAAGGGTAAGAGAGGCCCATCAGCTATTTCATCGAATGATCGATCGAGAATTGGATCCCGATGTCGTATTGTATAATACGCTAATTAATGCATATTGCAAGGATGGAAGGCTGCAAGAGGCAAGATCATTGCTACACGATATGACTCGAATTGGCATTTGCCCTGATAGTTTCACTTGTAGGATTATGGTGGAAGGATATGGAAGAGGAGGTAGGTTGATCTCAGCTTTGAATTTGGTTGTCGAACTTCGGAAACTTGGAACGATTGTTACTTACGAGATATATGATTATCTTATCGTGTCGTTGTGTCTGGAAGATCGTCCATTTGCAGCTAAGAGTGTTCTTGAAAGAATCATTAAAGATGGTTTCCAACCTAATGCTTGTATCTACAACAAGCTGATTGAATCTTTCTGCAGAGTTCATAATGTTTCTGAAGCACTGCTTTTGAAATCTGAAATGGTAAAGAGAAATTTTAAACTTAGCATTGATTCATACAAGCCTCTTATATCCTGTTTGTGTGGAATCAATAGAAGTGTAGATGGTGAAGGTTTAATGGTAGAAATGGTTGAATCTGGAGTGCTTCCGGATCATCAAATATGCAGAGTATTGATAAATGGATACTGCAAAGAAGGGAATGTTTATAAAGCAGAATCATTATTGGTATCATTTGCTAAAGATTTTGAGTTCTTTGACACTGAAAGTTTCAATGCCTTGGTTAAATTTCATCGCGATTTTGGTAATGAAACGGAGTTGATGCAGCTACAAGATCGAATGCTGAAAGTCGGTTTCGTTCCGAATAGCTTAACGTGCCGATACGTTATCCATGGATTATGGAAATCTGCAAGGCTCGACAAGAGGAGAGTTCAGGCTCCTCTTTGCCAAAGAGGGCGACATATAGATATGTGA

Coding sequence (CDS)

ATGCATCGAATTCCCGCTTCGAATCTCACCAAACTCTCGAAGCCCTTCGTCTTCCTCGCTTCAATTCCCAAGTCAAATTTCTCTTCTGCTTCATCCTCAACATTTTTACCATCAATTCCTCGGTCCGAAACTAAATTAATCGTCAACCCTCTTTACCATTTTCTCCCACAAAACCAAAACCCCTTCAACATCGTCGAACTCGTCTCCTCGCACCTCAAAACCAGCAACACAAACTTATCCCTTCTTCAATCCGACATTAAGGAGCTTCTTCCTCACTTGGGTCATCGTGAAGTCTCCAAGATTATATTGAGGTGCCAATCTAATTTCGTCTCTGTTCTTGCTTTTTTCAATTGGGTTAAATTTGATTTGGGGATTACACTTAGTTCTCAAAACTATTGTCTTATTATCCATATATTAGCATGGTCCCGACAATTTTCCATGGCGATGAAATTCTTGTCTGAATTGATTGAGTTGTCTAAGGATAATGCCTCAGGTAGTGAGGATGTTTTTCATAATCTGGTATTGTGCACTGAGCACTGTAATTGGAATCCTGTTATCTTTGAAATGCTTATTAAGGCGTATGTGAAAGTTCATATGATTCAGGAAAGTTATGAGAGCTTTAAGAAGATGGTGAAGATGGGTTTTGTTCCAAGTGTGATTGCTTGTAATTGTATTCTAAATGGACTGGCGAAGATGAAGTGTGATGCTCAATGTTGGGAACTCTATGAAGAAATGGGAAGGATTGGAGTTCACTCAAATGCATATACTTTTAATATTTTGACTTATGTTTTGTGTAGAGTTGGGGATGTGAATAAGGTTAATGAGTTCTTAGAAAAGATGGAAGAAGAGGGTTTCGATCCCGACGTCGTGACGTACAATACTTTGATCAATAGCTATTGTCGAAGAGGAAGATTAGATGATGCATTCTATTTATATAGGATAATGTTTAGAAGGGGTGTGATGCCCGATCTTGTTTCATATACTTCCTTGATGAATGGTCTTTGTAAGTTAGGAAGGGTAAGAGAGGCCCATCAGCTATTTCATCGAATGATCGATCGAGAATTGGATCCCGATGTCGTATTGTATAATACGCTAATTAATGCATATTGCAAGGATGGAAGGCTGCAAGAGGCAAGATCATTGCTACACGATATGACTCGAATTGGCATTTGCCCTGATAGTTTCACTTGTAGGATTATGGTGGAAGGATATGGAAGAGGAGGTAGGTTGATCTCAGCTTTGAATTTGGTTGTCGAACTTCGGAAACTTGGAACGATTGTTACTTACGAGATATATGATTATCTTATCGTGTCGTTGTGTCTGGAAGATCGTCCATTTGCAGCTAAGAGTGTTCTTGAAAGAATCATTAAAGATGGTTTCCAACCTAATGCTTGTATCTACAACAAGCTGATTGAATCTTTCTGCAGAGTTCATAATGTTTCTGAAGCACTGCTTTTGAAATCTGAAATGGTAAAGAGAAATTTTAAACTTAGCATTGATTCATACAAGCCTCTTATATCCTGTTTGTGTGGAATCAATAGAAGTGTAGATGGTGAAGGTTTAATGGTAGAAATGGTTGAATCTGGAGTGCTTCCGGATCATCAAATATGCAGAGTATTGATAAATGGATACTGCAAAGAAGGGAATGTTTATAAAGCAGAATCATTATTGGTATCATTTGCTAAAGATTTTGAGTTCTTTGACACTGAAAGTTTCAATGCCTTGGTTAAATTTCATCGCGATTTTGGTAATGAAACGGAGTTGATGCAGCTACAAGATCGAATGCTGAAAGTCGGTTTCGTTCCGAATAGCTTAACGTGCCGATACGTTATCCATGGATTATGGAAATCTGCAAGGCTCGACAAGAGGAGAGTTCAGGCTCCTCTTTGCCAAAGAGGGCGACATATAGATATGTGA

Protein sequence

MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM
Homology
BLAST of CmoCh04G028180 vs. ExPASy Swiss-Prot
Match: Q9FND8 (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX=3702 GN=At5g40400 PE=2 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 6.2e-173
Identity = 304/594 (51.18%), Postives = 421/594 (70.88%), Query Frame = 0

Query: 27  FSSASSSTFLPSIPRSET--KLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSL--L 86
           FSS SSS     +PR     K I+NPLY+ LPQ+QNP  IV+++ S L  S+ ++ L  L
Sbjct: 11  FSSYSSSI----VPRCSNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNL 70

Query: 87  QSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWS 146
           + ++K L+PHLG+ E+S+++LR QS+    + FF WVKFDLG   +  NYCL++HIL  S
Sbjct: 71  RDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSS 130

Query: 147 RQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQE 206
           ++F +AM+FL ELIEL+  +     DVF  LV  T+ CNW+PV+F+ML+K Y+K+ +++E
Sbjct: 131 KKFPLAMQFLCELIELT--SKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEE 190

Query: 207 SYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILTY 266
            +  F++++  GF  SV+ CN +LNGL K+     CW++Y  M R+G+H N YTFNILT 
Sbjct: 191 GFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTN 250

Query: 267 VLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMP 326
           V C   +  +V++FLEKMEEEGF+PD+VTYNTL++SYCRRGRL +AFYLY+IM+RR V+P
Sbjct: 251 VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVP 310

Query: 327 DLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLL 386
           DLV+YTSL+ GLCK GRVREAHQ FHRM+DR + PD + YNTLI AYCK+G +Q+++ LL
Sbjct: 311 DLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLL 370

Query: 387 HDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLE 446
           H+M    + PD FTC+++VEG+ R GRL+SA+N VVELR+L   + +E+ D+LIVSLC E
Sbjct: 371 HEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQE 430

Query: 447 DRPFAAKSVLERII-KDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDS 506
            +PFAAK +L+RII ++G +     YN LIES  R   + EAL+LK ++  +N  L   +
Sbjct: 431 GKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKT 490

Query: 507 YKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFA 566
           Y+ LI CLC I R+ + E LM EM +S V PD  IC  L+ GYCKE +  KAE LL  FA
Sbjct: 491 YRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFA 550

Query: 567 KDFEFFDTESFNALVKFHRDFG-NETELMQLQDRMLKVGFVPNSLTCRYVIHGL 615
            +F  FD ES+N+LVK   + G    + ++LQ+RM ++GFVPN LTC+Y+I  L
Sbjct: 551 MEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598

BLAST of CmoCh04G028180 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 3.4e-62
Identity = 151/507 (29.78%), Postives = 243/507 (47.93%), Query Frame = 0

Query: 113 LAFFNWVKFDLGITLSS--QNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVF 172
           L F  WV    G+      Q  C+  HIL  +R +  A   L EL  +S      S  VF
Sbjct: 54  LKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS----GKSSFVF 113

Query: 173 HNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLA 232
             L+     CN NP ++++LI+ Y++  MIQ+S E F+ M   GF PSV  CN IL  + 
Sbjct: 114 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 173

Query: 233 KMKCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVV 292
           K   D   W   +EM +  +  +  TFNIL  VLC  G   K +  ++KME+ G+ P +V
Sbjct: 174 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 233

Query: 293 TYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRM 352
           TYNT+++ YC++GR   A  L   M  +GV  D+ +Y  L++ LC+  R+ + + L   M
Sbjct: 234 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 293

Query: 353 IDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRL 412
             R + P+ V YNTLIN +  +G++  A  LL++M   G+ P+  T   +++G+   G  
Sbjct: 294 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 353

Query: 413 ISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKL 472
             AL +   +   G   +   Y  L+  LC       A+    R+ ++G       Y  +
Sbjct: 354 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 413

Query: 473 IESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGV 532
           I+  C+   + EA++L +EM K      I +Y  LI+  C + R    + ++  +   G+
Sbjct: 414 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 473

Query: 533 LPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQ 592
            P+  I   LI   C+ G + +A  +  +   +    D  +FN LV      G   E  +
Sbjct: 474 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 533

Query: 593 LQDRMLKVGFVPNSLTCRYVIHGLWKS 618
               M   G +PN+++   +I+G   S
Sbjct: 534 FMRCMTSDGILPNTVSFDCLINGYGNS 556

BLAST of CmoCh04G028180 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.3e-61
Identity = 151/525 (28.76%), Postives = 261/525 (49.71%), Query Frame = 0

Query: 99  SKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIEL 158
           S ++L+ Q++   +L F NW       TL  +  C+ +HIL   + +  A     ++   
Sbjct: 52  SNLLLKSQNDQALILKFLNWANPHQFFTLRCK--CITLHILTKFKLYKTAQILAEDVAAK 111

Query: 159 SKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPS 218
           + D+   S  VF +L    + C     +F++++K+Y ++ +I ++          GF+P 
Sbjct: 112 TLDDEYASL-VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPG 171

Query: 219 VIACNCILNGLAKMKCDAQCWE-LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFL 278
           V++ N +L+   + K +    E +++EM    V  N +T+NIL    C  G+++      
Sbjct: 172 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 231

Query: 279 EKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKL 338
           +KME +G  P+VVTYNTLI+ YC+  ++DD F L R M  +G+ P+L+SY  ++NGLC+ 
Sbjct: 232 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 291

Query: 339 GRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTC 398
           GR++E   +   M  R    D V YNTLI  YCK+G   +A  +  +M R G+ P   T 
Sbjct: 292 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 351

Query: 399 RIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIK 458
             ++    + G +  A+  + ++R  G       Y  L+     +     A  VL  +  
Sbjct: 352 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 411

Query: 459 DGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVD 518
           +GF P+   YN LI   C    + +A+ +  +M ++     + SY  ++S  C   RS D
Sbjct: 412 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC---RSYD 471

Query: 519 -GEGLMV--EMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNA 578
             E L V  EMVE G+ PD      LI G+C++    +A  L     +     D  ++ A
Sbjct: 472 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 531

Query: 579 LVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSAR 620
           L+  +   G+  + +QL + M++ G +P+ +T   +I+GL K +R
Sbjct: 532 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570

BLAST of CmoCh04G028180 vs. ExPASy Swiss-Prot
Match: O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.3e-61
Identity = 143/505 (28.32%), Postives = 256/505 (50.69%), Query Frame = 0

Query: 113 LAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHN 172
           L +++W+  +  I++S +    ++H LA ++++S    FL   +    D+   S  +FH 
Sbjct: 85  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHS--IFHA 144

Query: 173 LVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKM 232
           + +C   C  N +I +ML+ AY      +  +E+FK+    G+  S ++C  ++  L K 
Sbjct: 145 ISMCDNVC-VNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKE 204

Query: 233 KCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTY 292
              A    +Y+EM R  +  N +TFN++   LC+ G +NK  + +E M+  G  P+VV+Y
Sbjct: 205 NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSY 264

Query: 293 NTLINSYCR---RGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHR 352
           NTLI+ YC+    G++  A  + + M    V P+L ++  L++G  K   +  + ++F  
Sbjct: 265 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 324

Query: 353 MIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGR 412
           M+D+++ P+V+ YN+LIN  C  G++ EA S+   M   G+ P+  T   ++ G+ +   
Sbjct: 325 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 384

Query: 413 LISALNLVVELRKLGTIVTYEIYDYLIVSLC---LEDRPFAAKSVLERIIKDGFQPNACI 472
           L  AL++   ++  G + T  +Y+ LI + C     D  FA K  +ER   +G  P+   
Sbjct: 385 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER---EGIVPDVGT 444

Query: 473 YNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMV 532
           YN LI   CR  N+  A  L  ++  +     + ++  L+   C    S     L+ EM 
Sbjct: 445 YNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMS 504

Query: 533 ESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEF-FDTESFNALVKFHRDFGNE 592
           + G+ P H    +++ GYCKEGN+  A ++     K+     +  S+N L++ +   G  
Sbjct: 505 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 564

Query: 593 TELMQLQDRMLKVGFVPNSLTCRYV 611
            +   L + ML+ G VPN +T   V
Sbjct: 565 EDANMLLNEMLEKGLVPNRITYEIV 582

BLAST of CmoCh04G028180 vs. ExPASy Swiss-Prot
Match: Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.7e-61
Identity = 157/636 (24.69%), Postives = 291/636 (45.75%), Query Frame = 0

Query: 23  PKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSLL 82
           P  N +++SS  F PS   S +    +        + +   +VE +   LK  N N    
Sbjct: 20  PLKNLTTSSSPVFEPSSSSSSSSSSAS-------FSVSDSFLVEKICFSLKQGNNN---- 79

Query: 83  QSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDL-GITLSSQNYCLIIHILAW 142
              ++  L  L    V +++ RC+++      F + + F       +S +   +IHIL  
Sbjct: 80  ---VRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVR 139

Query: 143 SRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQ 202
           S + S A   L  +I  S        ++ ++L     +C  N  +F++LI+ YV+   ++
Sbjct: 140 SGRLSDAQSCLLRMIRRS---GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLR 199

Query: 203 ESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILT 262
           E++E+F  +   GF  S+ ACN ++  L ++      W +Y+E+ R GV  N YT NI+ 
Sbjct: 200 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 259

Query: 263 YVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVM 322
             LC+ G + KV  FL +++E+G  PD+VTYNTLI++Y  +G +++AF L   M  +G  
Sbjct: 260 NALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 319

Query: 323 PDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSL 382
           P + +Y +++NGLCK G+   A ++F  M+   L PD   Y +L+   CK G + E   +
Sbjct: 320 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 379

Query: 383 LHDM-----------------------------------TRIGICPDSFTCRIMVEGYGR 442
             DM                                      G+ PD+    I+++GY R
Sbjct: 380 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 439

Query: 443 GGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACI 502
            G +  A+NL  E+ + G  +    Y+ ++  LC       A  +   + +    P++  
Sbjct: 440 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 499

Query: 503 YNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMV 562
              LI+  C++ N+  A+ L  +M ++  +L + +Y  L+     +      + +  +MV
Sbjct: 500 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 559

Query: 563 ESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNET 622
              +LP      +L+N  C +G++ +A  +                N+++K +   GN +
Sbjct: 560 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 619

BLAST of CmoCh04G028180 vs. ExPASy TrEMBL
Match: A0A6J1E7L8 (pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita moschata OX=3662 GN=LOC111430138 PE=4 SV=1)

HSP 1 Score: 1295.0 bits (3350), Expect = 0.0e+00
Identity = 638/638 (100.00%), Postives = 638/638 (100.00%), Query Frame = 0

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
           MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN
Sbjct: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
           PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK
Sbjct: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120

Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
           FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180

Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
           NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240

Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
           LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300

Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
           RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360

Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
           LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420

Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
           RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480

Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
           SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540

Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
           INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600

Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM 639
           VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM 638

BLAST of CmoCh04G028180 vs. ExPASy TrEMBL
Match: A0A6J1JUZ7 (pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita maxima OX=3661 GN=LOC111487742 PE=4 SV=1)

HSP 1 Score: 1246.9 bits (3225), Expect = 0.0e+00
Identity = 612/633 (96.68%), Postives = 623/633 (98.42%), Query Frame = 0

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
           MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFL S+PRSETKLIVNPLYHFLPQNQN
Sbjct: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLQSVPRSETKLIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
           PFNIVELVSSHLKTSNT+LSLLQSDIKELLPHLGHRE+SKIILRCQSNFVSVLAFFNWVK
Sbjct: 61  PFNIVELVSSHLKTSNTHLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120

Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
           FDLGITL+SQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180

Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
           NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACN ILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNRILNGLAKMKCDAQCWE 240

Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
           LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300

Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
           RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCK GRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKFGRVREAHQLFHRMIDRELDPDVV 360

Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
           LYNTLINAYCKDGRLQEARSLLHDM RIGICPDSFTCRIMVEGYGRGG LISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMIRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420

Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
           R+LGTIVT++IYDYLIVSLC EDRPFAAKSVLERIIKDGFQPNACIYNKLIE FCRVHNV
Sbjct: 421 RRLGTIVTFDIYDYLIVSLCQEDRPFAAKSVLERIIKDGFQPNACIYNKLIECFCRVHNV 480

Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
           SEALLLKSEM++RN KLSIDSYKPLISCLCGINRSVDGE LMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMIRRNLKLSIDSYKPLISCLCGINRSVDGEDLMVEMVESGVLPDHQICRVL 540

Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
           INGYCKEGN YKAESLLVSFAKDFEFFDTESFNAL+KFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNAYKAESLLVSFAKDFEFFDTESFNALLKFHRDFGNETELMQLQDRMLKVGF 600

Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 634
           VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633

BLAST of CmoCh04G028180 vs. ExPASy TrEMBL
Match: A0A0A0KSF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523120 PE=4 SV=1)

HSP 1 Score: 1029.2 bits (2660), Expect = 7.1e-297
Identity = 507/633 (80.09%), Postives = 561/633 (88.63%), Query Frame = 0

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNF-------SSASSSTFLPSIPRSETKLIVNPLYH 60
           M R  ASNL KL++ F F  S  KS         SS+SSSTFL SIP SE KLIVNPLYH
Sbjct: 1   MLRTTASNLPKLAQSFFFHTSFSKSTLSSSSSSSSSSSSSTFLQSIPESEAKLIVNPLYH 60

Query: 61  FLPQNQNPFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVL 120
           FLPQNQNPFNIVELVSSHLKT+N  L+LLQS IKEL+PHLGHR++SKI+LRCQSNFVS L
Sbjct: 61  FLPQNQNPFNIVELVSSHLKTNNPRLALLQSHIKELIPHLGHRQISKILLRCQSNFVSAL 120

Query: 121 AFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNL 180
           AFFNWVK+DL I LSS NYCLIIHILAWSRQF +AMKFLSELIELSKD  S SEDVF NL
Sbjct: 121 AFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKD-VSSSEDVFQNL 180

Query: 181 VLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMK 240
           VLCTEHCNWNPVIFEMLIKAYVK+ +I ESY SFKKMVK+GFVP+VIACNCILNGLAKMK
Sbjct: 181 VLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMK 240

Query: 241 CDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYN 300
            DAQCWELYEEMGRIGVHSNAYTFNILTYVLCR GDVNK+N FLEKMEEEGFDPDVVTYN
Sbjct: 241 SDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYN 300

Query: 301 TLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDR 360
           TLI+SY RRGRL+DAFYLY+IM+RRGVMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR
Sbjct: 301 TLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDR 360

Query: 361 ELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISA 420
            +DPDVVLYNTLI AYCKDG LQEARSLLH+M  IGI PDSFTCRI+VEGYGR GRLISA
Sbjct: 361 GMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISA 420

Query: 421 LNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIES 480
           LNLVVE++KLG  V ++IY YLI+SLC EDRPFAAKS+LERI++D FQP++ IYNKLIES
Sbjct: 421 LNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIES 480

Query: 481 FCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPD 540
           FCR +NVSEALLLK EM+ RN+K + D+YK LI C+C INRSVDGEGLMVEMVES V+PD
Sbjct: 481 FCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPD 540

Query: 541 HQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQD 600
           H+ICR L+NGYCKEGN  KAESLLVSFAKDF+FFD+ESFN+LVK +RD GNET+LM+LQD
Sbjct: 541 HEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQD 600

Query: 601 RMLKVGFVPNSLTCRYVIHGLWKSARLDKRRVQ 627
           RMLK GF+PNSLTCRY+IHG+WKS RL+K+RVQ
Sbjct: 601 RMLKAGFLPNSLTCRYIIHGIWKSMRLNKQRVQ 632

BLAST of CmoCh04G028180 vs. ExPASy TrEMBL
Match: A0A1S3C995 (pentatricopeptide repeat-containing protein At5g40400 OS=Cucumis melo OX=3656 GN=LOC103498097 PE=4 SV=1)

HSP 1 Score: 1016.9 bits (2628), Expect = 3.6e-293
Identity = 499/627 (79.59%), Postives = 556/627 (88.68%), Query Frame = 0

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
           M R  ASNL KLS+ F FL+S  KS  SS+SSSTFL SIP SE K IVNPLYHFLPQNQN
Sbjct: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
           PFNIVELVS HLKT+N  L+LLQ++IK L+P+LGH ++SKI+LRCQSNFVS LAFFNWVK
Sbjct: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120

Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
           +DL I L+S NYCLIIHILAWSRQF +AMK LSELIELSKD  S SEDVF NLVLCTEHC
Sbjct: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKD-VSSSEDVFQNLVLCTEHC 180

Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
           NWNPVIFEMLIKAYVK+ +I ESY SFKKMVK+GFVPSVIACNCIL+GLAKMK D QCWE
Sbjct: 181 NWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPSVIACNCILHGLAKMKSDGQCWE 240

Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
           LYEEMGRIGVHSNAYTFNILTYVLCR GDVNK+NEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYC 300

Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
           RRGRLDDAFYLYRIM+RR VMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR +DPDVV
Sbjct: 301 RRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVV 360

Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
            YNTLI AYCKDG LQEARSLLHDM  IGI PD+FTCRI+VEGYGR GRLISALNLVVE+
Sbjct: 361 SYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEI 420

Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
           +KLG  + ++IY YLI+SLC EDRPFAAKS+LERI++D FQP++ IYNKLIESFCR +NV
Sbjct: 421 QKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 480

Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
           SEALLLKSEM+ RNFK +I +YK LI C+C INRSVDGEGLM EMVES VLPDH+ICR L
Sbjct: 481 SEALLLKSEMINRNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRAL 540

Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
           +NGYCKEGN  KAESLLVSFAKDF+FFD+ESFN+LVK + D GNET+LM+LQ RMLK GF
Sbjct: 541 VNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGF 600

Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQA 628
           +PN+LTC+Y+IHGLWK  RL+++RVQA
Sbjct: 601 LPNNLTCQYIIHGLWKFTRLNEQRVQA 626

BLAST of CmoCh04G028180 vs. ExPASy TrEMBL
Match: A0A5D3BTR0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00460 PE=4 SV=1)

HSP 1 Score: 1015.8 bits (2625), Expect = 8.1e-293
Identity = 498/627 (79.43%), Postives = 556/627 (88.68%), Query Frame = 0

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
           M R  ASNL KLS+ F FL+S  KS  SS+SSSTFL SIP SE K IVNPLYHFLPQNQN
Sbjct: 1   MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
           PFNIVELVS HLKT+N  L+LLQ++IK L+P+LGH ++SKI+LRCQSNFVS LAFFNWVK
Sbjct: 61  PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120

Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
           +DL I L+S NYCLIIHILAWSRQF +AMK LSELIELSKD  S SEDVF NLVLCTEHC
Sbjct: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKD-VSSSEDVFQNLVLCTEHC 180

Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
           NWNPVIFEMLIKAYVK+ +I ESY SFK+MVK+GFVPSVIACNCIL+GLAKMK D QCWE
Sbjct: 181 NWNPVIFEMLIKAYVKLDLIHESYWSFKRMVKLGFVPSVIACNCILHGLAKMKSDGQCWE 240

Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
           LYEEMGRIGVHSNAYTFNILTYVLCR GDVNK+NEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYC 300

Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
           RRGRLDDAFYLYRIM+RR VMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR +DPDVV
Sbjct: 301 RRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVV 360

Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
            YNTLI AYCKDG LQEARSLLHDM  IGI PD+FTCRI+VEGYGR GRLISALNLVVE+
Sbjct: 361 SYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEI 420

Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
           +KLG  + ++IY YLI+SLC EDRPFAAKS+LERI++D FQP++ IYNKLIESFCR +NV
Sbjct: 421 QKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 480

Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
           SEALLLKSEM+ RNFK +I +YK LI C+C INRSVDGEGLM EMVES VLPDH+ICR L
Sbjct: 481 SEALLLKSEMINRNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRAL 540

Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
           +NGYCKEGN  KAESLLVSFAKDF+FFD+ESFN+LVK + D GNET+LM+LQ RMLK GF
Sbjct: 541 VNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGF 600

Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQA 628
           +PN+LTC+Y+IHGLWK  RL+++RVQA
Sbjct: 601 LPNNLTCQYIIHGLWKFTRLNEQRVQA 626

BLAST of CmoCh04G028180 vs. NCBI nr
Match: XP_022922085.1 (pentatricopeptide repeat-containing protein At5g40400 [Cucurbita moschata])

HSP 1 Score: 1295.0 bits (3350), Expect = 0.0e+00
Identity = 638/638 (100.00%), Postives = 638/638 (100.00%), Query Frame = 0

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
           MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN
Sbjct: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
           PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK
Sbjct: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120

Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
           FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180

Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
           NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240

Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
           LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300

Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
           RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360

Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
           LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420

Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
           RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480

Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
           SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540

Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
           INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600

Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM 639
           VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM 638

BLAST of CmoCh04G028180 vs. NCBI nr
Match: KAG7033098.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1266.1 bits (3275), Expect = 0.0e+00
Identity = 622/633 (98.26%), Postives = 628/633 (99.21%), Query Frame = 0

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
           MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKL VNPLYHFLPQNQN
Sbjct: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLTVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
           PFNIVELVSSHLKTSNT LSLLQSDIKELLPHLGHRE+SKIILRCQSNFVSVLAFFNWVK
Sbjct: 61  PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120

Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
           FDLGITL+SQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180

Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
           NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240

Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
           LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300

Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
           RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360

Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
           LYNTLI+AYCKDGRLQEARSLLHDM RIGICPDSFTCRIMVEGYGRGG L+SALNLVVEL
Sbjct: 361 LYNTLIHAYCKDGRLQEARSLLHDMIRIGICPDSFTCRIMVEGYGRGGSLVSALNLVVEL 420

Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
           RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480

Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
           SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEM ESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMAESGVLPDHQICRVL 540

Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
           INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600

Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 634
           VPNSLTCRYVIHGLWKSARLD+RRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDERRVQAPLCQRG 633

BLAST of CmoCh04G028180 vs. NCBI nr
Match: XP_023535833.1 (pentatricopeptide repeat-containing protein At5g40400 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1263.8 bits (3269), Expect = 0.0e+00
Identity = 619/633 (97.79%), Postives = 627/633 (99.05%), Query Frame = 0

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
           MHRIPASNLTKLSKPF FLASIPKSNFSSASSSTFL SIPRSETKLIVNPLYHFLPQNQN
Sbjct: 1   MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
           PFNIVELVSSHLKTSNT LSLLQSDIKELLPHLGHRE+SKIILRCQSNFVSVLAFFNWVK
Sbjct: 61  PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120

Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
           FDLGITL+SQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180

Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
           NWNPVIFEML+KAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240

Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
           LYEEMGRIGVHSNAYTFNILTYVLCR GDVNKVNEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300

Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
           RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360

Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
           LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGG LISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420

Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
           RKLGTIVTY+IYDYLIVSLCLEDRPFAAKSVLER+IKDGFQPNACIYNKLIE FCRVHNV
Sbjct: 421 RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV 480

Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
           SEALLLKSEM+KRNFKLSIDSYKPLISCLCG+NRSVDGEGLMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL 540

Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
           INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600

Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 634
           VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633

BLAST of CmoCh04G028180 vs. NCBI nr
Match: KAG6602420.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1263.4 bits (3268), Expect = 0.0e+00
Identity = 622/633 (98.26%), Postives = 627/633 (99.05%), Query Frame = 0

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
           MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKL VNPLYHFLPQNQN
Sbjct: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLTVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
           PFNIVELVSSHLKTSNT LSLLQSDIKELLPHLGHRE+SKIILRCQSNFVSVLAFFNWVK
Sbjct: 61  PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120

Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
           FDLGITL+SQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180

Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
           NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240

Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
           LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300

Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
           RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360

Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
           LYNTLI+AYCKDGRLQEARSLLHDM RIGICPDSFTCRIMVEGYGRGG L+SALNLVVEL
Sbjct: 361 LYNTLIHAYCKDGRLQEARSLLHDMIRIGICPDSFTCRIMVEGYGRGGSLVSALNLVVEL 420

Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
           RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480

Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
           SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEM ESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMAESGVLPDHQICRVL 540

Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
           INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600

Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 634
           VPNSLTCRYVI GLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVILGLWKSARLDKRRVQAPLCQRG 633

BLAST of CmoCh04G028180 vs. NCBI nr
Match: XP_022991028.1 (pentatricopeptide repeat-containing protein At5g40400 [Cucurbita maxima])

HSP 1 Score: 1246.9 bits (3225), Expect = 0.0e+00
Identity = 612/633 (96.68%), Postives = 623/633 (98.42%), Query Frame = 0

Query: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
           MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFL S+PRSETKLIVNPLYHFLPQNQN
Sbjct: 1   MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLQSVPRSETKLIVNPLYHFLPQNQN 60

Query: 61  PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
           PFNIVELVSSHLKTSNT+LSLLQSDIKELLPHLGHRE+SKIILRCQSNFVSVLAFFNWVK
Sbjct: 61  PFNIVELVSSHLKTSNTHLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120

Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
           FDLGITL+SQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180

Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
           NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACN ILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNRILNGLAKMKCDAQCWE 240

Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
           LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300

Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
           RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCK GRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKFGRVREAHQLFHRMIDRELDPDVV 360

Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
           LYNTLINAYCKDGRLQEARSLLHDM RIGICPDSFTCRIMVEGYGRGG LISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMIRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420

Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
           R+LGTIVT++IYDYLIVSLC EDRPFAAKSVLERIIKDGFQPNACIYNKLIE FCRVHNV
Sbjct: 421 RRLGTIVTFDIYDYLIVSLCQEDRPFAAKSVLERIIKDGFQPNACIYNKLIECFCRVHNV 480

Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
           SEALLLKSEM++RN KLSIDSYKPLISCLCGINRSVDGE LMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMIRRNLKLSIDSYKPLISCLCGINRSVDGEDLMVEMVESGVLPDHQICRVL 540

Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
           INGYCKEGN YKAESLLVSFAKDFEFFDTESFNAL+KFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNAYKAESLLVSFAKDFEFFDTESFNALLKFHRDFGNETELMQLQDRMLKVGF 600

Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 634
           VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633

BLAST of CmoCh04G028180 vs. TAIR 10
Match: AT5G40400.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 609.0 bits (1569), Expect = 4.4e-174
Identity = 304/594 (51.18%), Postives = 421/594 (70.88%), Query Frame = 0

Query: 27  FSSASSSTFLPSIPRSET--KLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSL--L 86
           FSS SSS     +PR     K I+NPLY+ LPQ+QNP  IV+++ S L  S+ ++ L  L
Sbjct: 11  FSSYSSSI----VPRCSNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNL 70

Query: 87  QSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWS 146
           + ++K L+PHLG+ E+S+++LR QS+    + FF WVKFDLG   +  NYCL++HIL  S
Sbjct: 71  RDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSS 130

Query: 147 RQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQE 206
           ++F +AM+FL ELIEL+  +     DVF  LV  T+ CNW+PV+F+ML+K Y+K+ +++E
Sbjct: 131 KKFPLAMQFLCELIELT--SKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEE 190

Query: 207 SYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILTY 266
            +  F++++  GF  SV+ CN +LNGL K+     CW++Y  M R+G+H N YTFNILT 
Sbjct: 191 GFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTN 250

Query: 267 VLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMP 326
           V C   +  +V++FLEKMEEEGF+PD+VTYNTL++SYCRRGRL +AFYLY+IM+RR V+P
Sbjct: 251 VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVP 310

Query: 327 DLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLL 386
           DLV+YTSL+ GLCK GRVREAHQ FHRM+DR + PD + YNTLI AYCK+G +Q+++ LL
Sbjct: 311 DLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLL 370

Query: 387 HDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLE 446
           H+M    + PD FTC+++VEG+ R GRL+SA+N VVELR+L   + +E+ D+LIVSLC E
Sbjct: 371 HEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQE 430

Query: 447 DRPFAAKSVLERII-KDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDS 506
            +PFAAK +L+RII ++G +     YN LIES  R   + EAL+LK ++  +N  L   +
Sbjct: 431 GKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKT 490

Query: 507 YKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFA 566
           Y+ LI CLC I R+ + E LM EM +S V PD  IC  L+ GYCKE +  KAE LL  FA
Sbjct: 491 YRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFA 550

Query: 567 KDFEFFDTESFNALVKFHRDFG-NETELMQLQDRMLKVGFVPNSLTCRYVIHGL 615
            +F  FD ES+N+LVK   + G    + ++LQ+RM ++GFVPN LTC+Y+I  L
Sbjct: 551 MEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598

BLAST of CmoCh04G028180 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 241.1 bits (614), Expect = 2.4e-63
Identity = 151/507 (29.78%), Postives = 243/507 (47.93%), Query Frame = 0

Query: 113 LAFFNWVKFDLGITLSS--QNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVF 172
           L F  WV    G+      Q  C+  HIL  +R +  A   L EL  +S      S  VF
Sbjct: 94  LKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS----GKSSFVF 153

Query: 173 HNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLA 232
             L+     CN NP ++++LI+ Y++  MIQ+S E F+ M   GF PSV  CN IL  + 
Sbjct: 154 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 213

Query: 233 KMKCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVV 292
           K   D   W   +EM +  +  +  TFNIL  VLC  G   K +  ++KME+ G+ P +V
Sbjct: 214 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 273

Query: 293 TYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRM 352
           TYNT+++ YC++GR   A  L   M  +GV  D+ +Y  L++ LC+  R+ + + L   M
Sbjct: 274 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 333

Query: 353 IDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRL 412
             R + P+ V YNTLIN +  +G++  A  LL++M   G+ P+  T   +++G+   G  
Sbjct: 334 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 393

Query: 413 ISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKL 472
             AL +   +   G   +   Y  L+  LC       A+    R+ ++G       Y  +
Sbjct: 394 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 453

Query: 473 IESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGV 532
           I+  C+   + EA++L +EM K      I +Y  LI+  C + R    + ++  +   G+
Sbjct: 454 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 513

Query: 533 LPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQ 592
            P+  I   LI   C+ G + +A  +  +   +    D  +FN LV      G   E  +
Sbjct: 514 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 573

Query: 593 LQDRMLKVGFVPNSLTCRYVIHGLWKS 618
               M   G +PN+++   +I+G   S
Sbjct: 574 FMRCMTSDGILPNTVSFDCLINGYGNS 596

BLAST of CmoCh04G028180 vs. TAIR 10
Match: AT1G09820.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 239.2 bits (609), Expect = 9.1e-63
Identity = 143/505 (28.32%), Postives = 256/505 (50.69%), Query Frame = 0

Query: 113 LAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHN 172
           L +++W+  +  I++S +    ++H LA ++++S    FL   +    D+   S  +FH 
Sbjct: 85  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHS--IFHA 144

Query: 173 LVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKM 232
           + +C   C  N +I +ML+ AY      +  +E+FK+    G+  S ++C  ++  L K 
Sbjct: 145 ISMCDNVC-VNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKE 204

Query: 233 KCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTY 292
              A    +Y+EM R  +  N +TFN++   LC+ G +NK  + +E M+  G  P+VV+Y
Sbjct: 205 NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSY 264

Query: 293 NTLINSYCR---RGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHR 352
           NTLI+ YC+    G++  A  + + M    V P+L ++  L++G  K   +  + ++F  
Sbjct: 265 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 324

Query: 353 MIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGR 412
           M+D+++ P+V+ YN+LIN  C  G++ EA S+   M   G+ P+  T   ++ G+ +   
Sbjct: 325 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 384

Query: 413 LISALNLVVELRKLGTIVTYEIYDYLIVSLC---LEDRPFAAKSVLERIIKDGFQPNACI 472
           L  AL++   ++  G + T  +Y+ LI + C     D  FA K  +ER   +G  P+   
Sbjct: 385 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER---EGIVPDVGT 444

Query: 473 YNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMV 532
           YN LI   CR  N+  A  L  ++  +     + ++  L+   C    S     L+ EM 
Sbjct: 445 YNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMS 504

Query: 533 ESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEF-FDTESFNALVKFHRDFGNE 592
           + G+ P H    +++ GYCKEGN+  A ++     K+     +  S+N L++ +   G  
Sbjct: 505 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 564

Query: 593 TELMQLQDRMLKVGFVPNSLTCRYV 611
            +   L + ML+ G VPN +T   V
Sbjct: 565 EDANMLLNEMLEKGLVPNRITYEIV 582

BLAST of CmoCh04G028180 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 239.2 bits (609), Expect = 9.1e-63
Identity = 151/525 (28.76%), Postives = 261/525 (49.71%), Query Frame = 0

Query: 99  SKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIEL 158
           S ++L+ Q++   +L F NW       TL  +  C+ +HIL   + +  A     ++   
Sbjct: 52  SNLLLKSQNDQALILKFLNWANPHQFFTLRCK--CITLHILTKFKLYKTAQILAEDVAAK 111

Query: 159 SKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPS 218
           + D+   S  VF +L    + C     +F++++K+Y ++ +I ++          GF+P 
Sbjct: 112 TLDDEYASL-VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPG 171

Query: 219 VIACNCILNGLAKMKCDAQCWE-LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFL 278
           V++ N +L+   + K +    E +++EM    V  N +T+NIL    C  G+++      
Sbjct: 172 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 231

Query: 279 EKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKL 338
           +KME +G  P+VVTYNTLI+ YC+  ++DD F L R M  +G+ P+L+SY  ++NGLC+ 
Sbjct: 232 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 291

Query: 339 GRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTC 398
           GR++E   +   M  R    D V YNTLI  YCK+G   +A  +  +M R G+ P   T 
Sbjct: 292 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 351

Query: 399 RIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIK 458
             ++    + G +  A+  + ++R  G       Y  L+     +     A  VL  +  
Sbjct: 352 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 411

Query: 459 DGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVD 518
           +GF P+   YN LI   C    + +A+ +  +M ++     + SY  ++S  C   RS D
Sbjct: 412 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC---RSYD 471

Query: 519 -GEGLMV--EMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNA 578
             E L V  EMVE G+ PD      LI G+C++    +A  L     +     D  ++ A
Sbjct: 472 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 531

Query: 579 LVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSAR 620
           L+  +   G+  + +QL + M++ G +P+ +T   +I+GL K +R
Sbjct: 532 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570

BLAST of CmoCh04G028180 vs. TAIR 10
Match: AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-62
Identity = 157/636 (24.69%), Postives = 291/636 (45.75%), Query Frame = 0

Query: 23  PKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSLL 82
           P  N +++SS  F PS   S +    +        + +   +VE +   LK  N N    
Sbjct: 20  PLKNLTTSSSPVFEPSSSSSSSSSSAS-------FSVSDSFLVEKICFSLKQGNNN---- 79

Query: 83  QSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDL-GITLSSQNYCLIIHILAW 142
              ++  L  L    V +++ RC+++      F + + F       +S +   +IHIL  
Sbjct: 80  ---VRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVR 139

Query: 143 SRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQ 202
           S + S A   L  +I  S        ++ ++L     +C  N  +F++LI+ YV+   ++
Sbjct: 140 SGRLSDAQSCLLRMIRRS---GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLR 199

Query: 203 ESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILT 262
           E++E+F  +   GF  S+ ACN ++  L ++      W +Y+E+ R GV  N YT NI+ 
Sbjct: 200 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 259

Query: 263 YVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVM 322
             LC+ G + KV  FL +++E+G  PD+VTYNTLI++Y  +G +++AF L   M  +G  
Sbjct: 260 NALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 319

Query: 323 PDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSL 382
           P + +Y +++NGLCK G+   A ++F  M+   L PD   Y +L+   CK G + E   +
Sbjct: 320 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 379

Query: 383 LHDM-----------------------------------TRIGICPDSFTCRIMVEGYGR 442
             DM                                      G+ PD+    I+++GY R
Sbjct: 380 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 439

Query: 443 GGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACI 502
            G +  A+NL  E+ + G  +    Y+ ++  LC       A  +   + +    P++  
Sbjct: 440 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 499

Query: 503 YNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMV 562
              LI+  C++ N+  A+ L  +M ++  +L + +Y  L+     +      + +  +MV
Sbjct: 500 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 559

Query: 563 ESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNET 622
              +LP      +L+N  C +G++ +A  +                N+++K +   GN +
Sbjct: 560 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 619

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FND86.2e-17351.18Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX... [more]
Q9LVQ53.4e-6229.78Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... [more]
Q9FIX31.3e-6128.76Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
O045041.3e-6128.32Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX... [more]
Q9LFC51.7e-6124.69Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1E7L80.0e+00100.00pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita moschata OX=3... [more]
A0A6J1JUZ70.0e+0096.68pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita maxima OX=366... [more]
A0A0A0KSF17.1e-29780.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523120 PE=4 SV=1[more]
A0A1S3C9953.6e-29379.59pentatricopeptide repeat-containing protein At5g40400 OS=Cucumis melo OX=3656 GN... [more]
A0A5D3BTR08.1e-29379.43Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
XP_022922085.10.0e+00100.00pentatricopeptide repeat-containing protein At5g40400 [Cucurbita moschata][more]
KAG7033098.10.0e+0098.26Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023535833.10.0e+0097.79pentatricopeptide repeat-containing protein At5g40400 [Cucurbita pepo subsp. pep... [more]
KAG6602420.10.0e+0098.26Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022991028.10.0e+0096.68pentatricopeptide repeat-containing protein At5g40400 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G40400.14.4e-17451.18Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G55840.12.4e-6329.78Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G09820.19.1e-6328.32Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G39710.19.1e-6328.76Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G01110.11.2e-6224.69Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 65..236
e-value: 3.0E-15
score: 58.2
coord: 351..426
e-value: 1.9E-18
score: 68.7
coord: 237..279
e-value: 1.6E-7
score: 33.1
coord: 564..625
e-value: 3.3E-5
score: 25.4
coord: 280..350
e-value: 1.9E-26
score: 94.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 442..563
e-value: 2.6E-23
score: 85.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 462..510
e-value: 9.7E-9
score: 35.3
coord: 217..266
e-value: 6.0E-9
score: 36.0
coord: 287..336
e-value: 6.7E-19
score: 67.8
coord: 357..404
e-value: 2.9E-15
score: 56.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 539..557
e-value: 0.0046
score: 17.1
coord: 187..215
e-value: 0.085
score: 13.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 185..219
e-value: 8.6E-4
score: 17.3
coord: 255..289
e-value: 2.3E-6
score: 25.4
coord: 466..498
e-value: 2.3E-5
score: 22.3
coord: 290..323
e-value: 1.0E-10
score: 39.1
coord: 360..393
e-value: 3.2E-9
score: 34.4
coord: 325..359
e-value: 2.3E-10
score: 38.0
coord: 501..533
e-value: 0.0019
score: 16.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 393..427
score: 8.801982
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 463..497
score: 9.876189
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 323..357
score: 13.438611
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 358..392
score: 13.855141
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 498..532
score: 8.736214
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 568..602
score: 8.560833
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 253..287
score: 11.39981
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 183..217
score: 10.500983
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 288..322
score: 14.534741
NoneNo IPR availablePANTHERPTHR47941:SF6OS01G0546700 PROTEINcoord: 23..621
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 23..621
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 194..383

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G028180.1CmoCh04G028180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding