Homology
BLAST of CmoCh04G028180 vs. ExPASy Swiss-Prot
Match:
Q9FND8 (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX=3702 GN=At5g40400 PE=2 SV=1)
HSP 1 Score: 609.0 bits (1569), Expect = 6.2e-173
Identity = 304/594 (51.18%), Postives = 421/594 (70.88%), Query Frame = 0
Query: 27 FSSASSSTFLPSIPRSET--KLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSL--L 86
FSS SSS +PR K I+NPLY+ LPQ+QNP IV+++ S L S+ ++ L L
Sbjct: 11 FSSYSSSI----VPRCSNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNL 70
Query: 87 QSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWS 146
+ ++K L+PHLG+ E+S+++LR QS+ + FF WVKFDLG + NYCL++HIL S
Sbjct: 71 RDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSS 130
Query: 147 RQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQE 206
++F +AM+FL ELIEL+ + DVF LV T+ CNW+PV+F+ML+K Y+K+ +++E
Sbjct: 131 KKFPLAMQFLCELIELT--SKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEE 190
Query: 207 SYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILTY 266
+ F++++ GF SV+ CN +LNGL K+ CW++Y M R+G+H N YTFNILT
Sbjct: 191 GFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTN 250
Query: 267 VLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMP 326
V C + +V++FLEKMEEEGF+PD+VTYNTL++SYCRRGRL +AFYLY+IM+RR V+P
Sbjct: 251 VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVP 310
Query: 327 DLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLL 386
DLV+YTSL+ GLCK GRVREAHQ FHRM+DR + PD + YNTLI AYCK+G +Q+++ LL
Sbjct: 311 DLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLL 370
Query: 387 HDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLE 446
H+M + PD FTC+++VEG+ R GRL+SA+N VVELR+L + +E+ D+LIVSLC E
Sbjct: 371 HEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQE 430
Query: 447 DRPFAAKSVLERII-KDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDS 506
+PFAAK +L+RII ++G + YN LIES R + EAL+LK ++ +N L +
Sbjct: 431 GKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKT 490
Query: 507 YKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFA 566
Y+ LI CLC I R+ + E LM EM +S V PD IC L+ GYCKE + KAE LL FA
Sbjct: 491 YRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFA 550
Query: 567 KDFEFFDTESFNALVKFHRDFG-NETELMQLQDRMLKVGFVPNSLTCRYVIHGL 615
+F FD ES+N+LVK + G + ++LQ+RM ++GFVPN LTC+Y+I L
Sbjct: 551 MEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
BLAST of CmoCh04G028180 vs. ExPASy Swiss-Prot
Match:
Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)
HSP 1 Score: 241.1 bits (614), Expect = 3.4e-62
Identity = 151/507 (29.78%), Postives = 243/507 (47.93%), Query Frame = 0
Query: 113 LAFFNWVKFDLGITLSS--QNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVF 172
L F WV G+ Q C+ HIL +R + A L EL +S S VF
Sbjct: 54 LKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS----GKSSFVF 113
Query: 173 HNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLA 232
L+ CN NP ++++LI+ Y++ MIQ+S E F+ M GF PSV CN IL +
Sbjct: 114 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 173
Query: 233 KMKCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVV 292
K D W +EM + + + TFNIL VLC G K + ++KME+ G+ P +V
Sbjct: 174 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 233
Query: 293 TYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRM 352
TYNT+++ YC++GR A L M +GV D+ +Y L++ LC+ R+ + + L M
Sbjct: 234 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 293
Query: 353 IDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRL 412
R + P+ V YNTLIN + +G++ A LL++M G+ P+ T +++G+ G
Sbjct: 294 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 353
Query: 413 ISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKL 472
AL + + G + Y L+ LC A+ R+ ++G Y +
Sbjct: 354 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 413
Query: 473 IESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGV 532
I+ C+ + EA++L +EM K I +Y LI+ C + R + ++ + G+
Sbjct: 414 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 473
Query: 533 LPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQ 592
P+ I LI C+ G + +A + + + D +FN LV G E +
Sbjct: 474 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 533
Query: 593 LQDRMLKVGFVPNSLTCRYVIHGLWKS 618
M G +PN+++ +I+G S
Sbjct: 534 FMRCMTSDGILPNTVSFDCLINGYGNS 556
BLAST of CmoCh04G028180 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 239.2 bits (609), Expect = 1.3e-61
Identity = 151/525 (28.76%), Postives = 261/525 (49.71%), Query Frame = 0
Query: 99 SKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIEL 158
S ++L+ Q++ +L F NW TL + C+ +HIL + + A ++
Sbjct: 52 SNLLLKSQNDQALILKFLNWANPHQFFTLRCK--CITLHILTKFKLYKTAQILAEDVAAK 111
Query: 159 SKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPS 218
+ D+ S VF +L + C +F++++K+Y ++ +I ++ GF+P
Sbjct: 112 TLDDEYASL-VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPG 171
Query: 219 VIACNCILNGLAKMKCDAQCWE-LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFL 278
V++ N +L+ + K + E +++EM V N +T+NIL C G+++
Sbjct: 172 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 231
Query: 279 EKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKL 338
+KME +G P+VVTYNTLI+ YC+ ++DD F L R M +G+ P+L+SY ++NGLC+
Sbjct: 232 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 291
Query: 339 GRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTC 398
GR++E + M R D V YNTLI YCK+G +A + +M R G+ P T
Sbjct: 292 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 351
Query: 399 RIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIK 458
++ + G + A+ + ++R G Y L+ + A VL +
Sbjct: 352 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 411
Query: 459 DGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVD 518
+GF P+ YN LI C + +A+ + +M ++ + SY ++S C RS D
Sbjct: 412 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC---RSYD 471
Query: 519 -GEGLMV--EMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNA 578
E L V EMVE G+ PD LI G+C++ +A L + D ++ A
Sbjct: 472 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 531
Query: 579 LVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSAR 620
L+ + G+ + +QL + M++ G +P+ +T +I+GL K +R
Sbjct: 532 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
BLAST of CmoCh04G028180 vs. ExPASy Swiss-Prot
Match:
O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)
HSP 1 Score: 239.2 bits (609), Expect = 1.3e-61
Identity = 143/505 (28.32%), Postives = 256/505 (50.69%), Query Frame = 0
Query: 113 LAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHN 172
L +++W+ + I++S + ++H LA ++++S FL + D+ S +FH
Sbjct: 85 LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHS--IFHA 144
Query: 173 LVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKM 232
+ +C C N +I +ML+ AY + +E+FK+ G+ S ++C ++ L K
Sbjct: 145 ISMCDNVC-VNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKE 204
Query: 233 KCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTY 292
A +Y+EM R + N +TFN++ LC+ G +NK + +E M+ G P+VV+Y
Sbjct: 205 NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSY 264
Query: 293 NTLINSYCR---RGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHR 352
NTLI+ YC+ G++ A + + M V P+L ++ L++G K + + ++F
Sbjct: 265 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 324
Query: 353 MIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGR 412
M+D+++ P+V+ YN+LIN C G++ EA S+ M G+ P+ T ++ G+ +
Sbjct: 325 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 384
Query: 413 LISALNLVVELRKLGTIVTYEIYDYLIVSLC---LEDRPFAAKSVLERIIKDGFQPNACI 472
L AL++ ++ G + T +Y+ LI + C D FA K +ER +G P+
Sbjct: 385 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER---EGIVPDVGT 444
Query: 473 YNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMV 532
YN LI CR N+ A L ++ + + ++ L+ C S L+ EM
Sbjct: 445 YNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMS 504
Query: 533 ESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEF-FDTESFNALVKFHRDFGNE 592
+ G+ P H +++ GYCKEGN+ A ++ K+ + S+N L++ + G
Sbjct: 505 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 564
Query: 593 TELMQLQDRMLKVGFVPNSLTCRYV 611
+ L + ML+ G VPN +T V
Sbjct: 565 EDANMLLNEMLEKGLVPNRITYEIV 582
BLAST of CmoCh04G028180 vs. ExPASy Swiss-Prot
Match:
Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)
HSP 1 Score: 238.8 bits (608), Expect = 1.7e-61
Identity = 157/636 (24.69%), Postives = 291/636 (45.75%), Query Frame = 0
Query: 23 PKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSLL 82
P N +++SS F PS S + + + + +VE + LK N N
Sbjct: 20 PLKNLTTSSSPVFEPSSSSSSSSSSAS-------FSVSDSFLVEKICFSLKQGNNN---- 79
Query: 83 QSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDL-GITLSSQNYCLIIHILAW 142
++ L L V +++ RC+++ F + + F +S + +IHIL
Sbjct: 80 ---VRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVR 139
Query: 143 SRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQ 202
S + S A L +I S ++ ++L +C N +F++LI+ YV+ ++
Sbjct: 140 SGRLSDAQSCLLRMIRRS---GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLR 199
Query: 203 ESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILT 262
E++E+F + GF S+ ACN ++ L ++ W +Y+E+ R GV N YT NI+
Sbjct: 200 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 259
Query: 263 YVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVM 322
LC+ G + KV FL +++E+G PD+VTYNTLI++Y +G +++AF L M +G
Sbjct: 260 NALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 319
Query: 323 PDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSL 382
P + +Y +++NGLCK G+ A ++F M+ L PD Y +L+ CK G + E +
Sbjct: 320 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 379
Query: 383 LHDM-----------------------------------TRIGICPDSFTCRIMVEGYGR 442
DM G+ PD+ I+++GY R
Sbjct: 380 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 439
Query: 443 GGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACI 502
G + A+NL E+ + G + Y+ ++ LC A + + + P++
Sbjct: 440 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 499
Query: 503 YNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMV 562
LI+ C++ N+ A+ L +M ++ +L + +Y L+ + + + +MV
Sbjct: 500 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 559
Query: 563 ESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNET 622
+LP +L+N C +G++ +A + N+++K + GN +
Sbjct: 560 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 619
BLAST of CmoCh04G028180 vs. ExPASy TrEMBL
Match:
A0A6J1E7L8 (pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita moschata OX=3662 GN=LOC111430138 PE=4 SV=1)
HSP 1 Score: 1295.0 bits (3350), Expect = 0.0e+00
Identity = 638/638 (100.00%), Postives = 638/638 (100.00%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM 639
VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM 638
BLAST of CmoCh04G028180 vs. ExPASy TrEMBL
Match:
A0A6J1JUZ7 (pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita maxima OX=3661 GN=LOC111487742 PE=4 SV=1)
HSP 1 Score: 1246.9 bits (3225), Expect = 0.0e+00
Identity = 612/633 (96.68%), Postives = 623/633 (98.42%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFL S+PRSETKLIVNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLQSVPRSETKLIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNT+LSLLQSDIKELLPHLGHRE+SKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTHLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITL+SQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACN ILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNRILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCK GRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKFGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
LYNTLINAYCKDGRLQEARSLLHDM RIGICPDSFTCRIMVEGYGRGG LISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMIRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
R+LGTIVT++IYDYLIVSLC EDRPFAAKSVLERIIKDGFQPNACIYNKLIE FCRVHNV
Sbjct: 421 RRLGTIVTFDIYDYLIVSLCQEDRPFAAKSVLERIIKDGFQPNACIYNKLIECFCRVHNV 480
Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEM++RN KLSIDSYKPLISCLCGINRSVDGE LMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMIRRNLKLSIDSYKPLISCLCGINRSVDGEDLMVEMVESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGN YKAESLLVSFAKDFEFFDTESFNAL+KFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNAYKAESLLVSFAKDFEFFDTESFNALLKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 634
VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
BLAST of CmoCh04G028180 vs. ExPASy TrEMBL
Match:
A0A0A0KSF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523120 PE=4 SV=1)
HSP 1 Score: 1029.2 bits (2660), Expect = 7.1e-297
Identity = 507/633 (80.09%), Postives = 561/633 (88.63%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFVFLASIPKSNF-------SSASSSTFLPSIPRSETKLIVNPLYH 60
M R ASNL KL++ F F S KS SS+SSSTFL SIP SE KLIVNPLYH
Sbjct: 1 MLRTTASNLPKLAQSFFFHTSFSKSTLSSSSSSSSSSSSSTFLQSIPESEAKLIVNPLYH 60
Query: 61 FLPQNQNPFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVL 120
FLPQNQNPFNIVELVSSHLKT+N L+LLQS IKEL+PHLGHR++SKI+LRCQSNFVS L
Sbjct: 61 FLPQNQNPFNIVELVSSHLKTNNPRLALLQSHIKELIPHLGHRQISKILLRCQSNFVSAL 120
Query: 121 AFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNL 180
AFFNWVK+DL I LSS NYCLIIHILAWSRQF +AMKFLSELIELSKD S SEDVF NL
Sbjct: 121 AFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKD-VSSSEDVFQNL 180
Query: 181 VLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMK 240
VLCTEHCNWNPVIFEMLIKAYVK+ +I ESY SFKKMVK+GFVP+VIACNCILNGLAKMK
Sbjct: 181 VLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMK 240
Query: 241 CDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYN 300
DAQCWELYEEMGRIGVHSNAYTFNILTYVLCR GDVNK+N FLEKMEEEGFDPDVVTYN
Sbjct: 241 SDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYN 300
Query: 301 TLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDR 360
TLI+SY RRGRL+DAFYLY+IM+RRGVMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR
Sbjct: 301 TLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDR 360
Query: 361 ELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISA 420
+DPDVVLYNTLI AYCKDG LQEARSLLH+M IGI PDSFTCRI+VEGYGR GRLISA
Sbjct: 361 GMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISA 420
Query: 421 LNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIES 480
LNLVVE++KLG V ++IY YLI+SLC EDRPFAAKS+LERI++D FQP++ IYNKLIES
Sbjct: 421 LNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIES 480
Query: 481 FCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPD 540
FCR +NVSEALLLK EM+ RN+K + D+YK LI C+C INRSVDGEGLMVEMVES V+PD
Sbjct: 481 FCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPD 540
Query: 541 HQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQD 600
H+ICR L+NGYCKEGN KAESLLVSFAKDF+FFD+ESFN+LVK +RD GNET+LM+LQD
Sbjct: 541 HEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQD 600
Query: 601 RMLKVGFVPNSLTCRYVIHGLWKSARLDKRRVQ 627
RMLK GF+PNSLTCRY+IHG+WKS RL+K+RVQ
Sbjct: 601 RMLKAGFLPNSLTCRYIIHGIWKSMRLNKQRVQ 632
BLAST of CmoCh04G028180 vs. ExPASy TrEMBL
Match:
A0A1S3C995 (pentatricopeptide repeat-containing protein At5g40400 OS=Cucumis melo OX=3656 GN=LOC103498097 PE=4 SV=1)
HSP 1 Score: 1016.9 bits (2628), Expect = 3.6e-293
Identity = 499/627 (79.59%), Postives = 556/627 (88.68%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
M R ASNL KLS+ F FL+S KS SS+SSSTFL SIP SE K IVNPLYHFLPQNQN
Sbjct: 1 MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVS HLKT+N L+LLQ++IK L+P+LGH ++SKI+LRCQSNFVS LAFFNWVK
Sbjct: 61 PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120
Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
+DL I L+S NYCLIIHILAWSRQF +AMK LSELIELSKD S SEDVF NLVLCTEHC
Sbjct: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKD-VSSSEDVFQNLVLCTEHC 180
Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEMLIKAYVK+ +I ESY SFKKMVK+GFVPSVIACNCIL+GLAKMK D QCWE
Sbjct: 181 NWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPSVIACNCILHGLAKMKSDGQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCR GDVNK+NEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIM+RR VMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR +DPDVV
Sbjct: 301 RRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
YNTLI AYCKDG LQEARSLLHDM IGI PD+FTCRI+VEGYGR GRLISALNLVVE+
Sbjct: 361 SYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEI 420
Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
+KLG + ++IY YLI+SLC EDRPFAAKS+LERI++D FQP++ IYNKLIESFCR +NV
Sbjct: 421 QKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 480
Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEM+ RNFK +I +YK LI C+C INRSVDGEGLM EMVES VLPDH+ICR L
Sbjct: 481 SEALLLKSEMINRNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRAL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
+NGYCKEGN KAESLLVSFAKDF+FFD+ESFN+LVK + D GNET+LM+LQ RMLK GF
Sbjct: 541 VNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQA 628
+PN+LTC+Y+IHGLWK RL+++RVQA
Sbjct: 601 LPNNLTCQYIIHGLWKFTRLNEQRVQA 626
BLAST of CmoCh04G028180 vs. ExPASy TrEMBL
Match:
A0A5D3BTR0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00460 PE=4 SV=1)
HSP 1 Score: 1015.8 bits (2625), Expect = 8.1e-293
Identity = 498/627 (79.43%), Postives = 556/627 (88.68%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
M R ASNL KLS+ F FL+S KS SS+SSSTFL SIP SE K IVNPLYHFLPQNQN
Sbjct: 1 MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVS HLKT+N L+LLQ++IK L+P+LGH ++SKI+LRCQSNFVS LAFFNWVK
Sbjct: 61 PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120
Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
+DL I L+S NYCLIIHILAWSRQF +AMK LSELIELSKD S SEDVF NLVLCTEHC
Sbjct: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKD-VSSSEDVFQNLVLCTEHC 180
Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEMLIKAYVK+ +I ESY SFK+MVK+GFVPSVIACNCIL+GLAKMK D QCWE
Sbjct: 181 NWNPVIFEMLIKAYVKLDLIHESYWSFKRMVKLGFVPSVIACNCILHGLAKMKSDGQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCR GDVNK+NEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIM+RR VMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR +DPDVV
Sbjct: 301 RRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
YNTLI AYCKDG LQEARSLLHDM IGI PD+FTCRI+VEGYGR GRLISALNLVVE+
Sbjct: 361 SYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEI 420
Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
+KLG + ++IY YLI+SLC EDRPFAAKS+LERI++D FQP++ IYNKLIESFCR +NV
Sbjct: 421 QKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 480
Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEM+ RNFK +I +YK LI C+C INRSVDGEGLM EMVES VLPDH+ICR L
Sbjct: 481 SEALLLKSEMINRNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRAL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
+NGYCKEGN KAESLLVSFAKDF+FFD+ESFN+LVK + D GNET+LM+LQ RMLK GF
Sbjct: 541 VNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQA 628
+PN+LTC+Y+IHGLWK RL+++RVQA
Sbjct: 601 LPNNLTCQYIIHGLWKFTRLNEQRVQA 626
BLAST of CmoCh04G028180 vs. NCBI nr
Match:
XP_022922085.1 (pentatricopeptide repeat-containing protein At5g40400 [Cucurbita moschata])
HSP 1 Score: 1295.0 bits (3350), Expect = 0.0e+00
Identity = 638/638 (100.00%), Postives = 638/638 (100.00%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM 639
VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRGRHIDM 638
BLAST of CmoCh04G028180 vs. NCBI nr
Match:
KAG7033098.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1266.1 bits (3275), Expect = 0.0e+00
Identity = 622/633 (98.26%), Postives = 628/633 (99.21%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKL VNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLTVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNT LSLLQSDIKELLPHLGHRE+SKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITL+SQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
LYNTLI+AYCKDGRLQEARSLLHDM RIGICPDSFTCRIMVEGYGRGG L+SALNLVVEL
Sbjct: 361 LYNTLIHAYCKDGRLQEARSLLHDMIRIGICPDSFTCRIMVEGYGRGGSLVSALNLVVEL 420
Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEM ESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMAESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 634
VPNSLTCRYVIHGLWKSARLD+RRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDERRVQAPLCQRG 633
BLAST of CmoCh04G028180 vs. NCBI nr
Match:
XP_023535833.1 (pentatricopeptide repeat-containing protein At5g40400 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1263.8 bits (3269), Expect = 0.0e+00
Identity = 619/633 (97.79%), Postives = 627/633 (99.05%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPF FLASIPKSNFSSASSSTFL SIPRSETKLIVNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNT LSLLQSDIKELLPHLGHRE+SKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITL+SQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEML+KAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCR GDVNKVNEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGG LISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
RKLGTIVTY+IYDYLIVSLCLEDRPFAAKSVLER+IKDGFQPNACIYNKLIE FCRVHNV
Sbjct: 421 RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV 480
Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEM+KRNFKLSIDSYKPLISCLCG+NRSVDGEGLMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 634
VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
BLAST of CmoCh04G028180 vs. NCBI nr
Match:
KAG6602420.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1263.4 bits (3268), Expect = 0.0e+00
Identity = 622/633 (98.26%), Postives = 627/633 (99.05%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKL VNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLTVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNT LSLLQSDIKELLPHLGHRE+SKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITL+SQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
LYNTLI+AYCKDGRLQEARSLLHDM RIGICPDSFTCRIMVEGYGRGG L+SALNLVVEL
Sbjct: 361 LYNTLIHAYCKDGRLQEARSLLHDMIRIGICPDSFTCRIMVEGYGRGGSLVSALNLVVEL 420
Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEM ESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMAESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 634
VPNSLTCRYVI GLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVILGLWKSARLDKRRVQAPLCQRG 633
BLAST of CmoCh04G028180 vs. NCBI nr
Match:
XP_022991028.1 (pentatricopeptide repeat-containing protein At5g40400 [Cucurbita maxima])
HSP 1 Score: 1246.9 bits (3225), Expect = 0.0e+00
Identity = 612/633 (96.68%), Postives = 623/633 (98.42%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFL S+PRSETKLIVNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLQSVPRSETKLIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNT+LSLLQSDIKELLPHLGHRE+SKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTHLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITL+SQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACN ILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNRILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCK GRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKFGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
LYNTLINAYCKDGRLQEARSLLHDM RIGICPDSFTCRIMVEGYGRGG LISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMIRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
Query: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
R+LGTIVT++IYDYLIVSLC EDRPFAAKSVLERIIKDGFQPNACIYNKLIE FCRVHNV
Sbjct: 421 RRLGTIVTFDIYDYLIVSLCQEDRPFAAKSVLERIIKDGFQPNACIYNKLIECFCRVHNV 480
Query: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEM++RN KLSIDSYKPLISCLCGINRSVDGE LMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMIRRNLKLSIDSYKPLISCLCGINRSVDGEDLMVEMVESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGN YKAESLLVSFAKDFEFFDTESFNAL+KFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNAYKAESLLVSFAKDFEFFDTESFNALLKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 634
VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
BLAST of CmoCh04G028180 vs. TAIR 10
Match:
AT5G40400.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 609.0 bits (1569), Expect = 4.4e-174
Identity = 304/594 (51.18%), Postives = 421/594 (70.88%), Query Frame = 0
Query: 27 FSSASSSTFLPSIPRSET--KLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSL--L 86
FSS SSS +PR K I+NPLY+ LPQ+QNP IV+++ S L S+ ++ L L
Sbjct: 11 FSSYSSSI----VPRCSNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNL 70
Query: 87 QSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWS 146
+ ++K L+PHLG+ E+S+++LR QS+ + FF WVKFDLG + NYCL++HIL S
Sbjct: 71 RDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSS 130
Query: 147 RQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQE 206
++F +AM+FL ELIEL+ + DVF LV T+ CNW+PV+F+ML+K Y+K+ +++E
Sbjct: 131 KKFPLAMQFLCELIELT--SKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEE 190
Query: 207 SYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILTY 266
+ F++++ GF SV+ CN +LNGL K+ CW++Y M R+G+H N YTFNILT
Sbjct: 191 GFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTN 250
Query: 267 VLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMP 326
V C + +V++FLEKMEEEGF+PD+VTYNTL++SYCRRGRL +AFYLY+IM+RR V+P
Sbjct: 251 VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVP 310
Query: 327 DLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLL 386
DLV+YTSL+ GLCK GRVREAHQ FHRM+DR + PD + YNTLI AYCK+G +Q+++ LL
Sbjct: 311 DLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLL 370
Query: 387 HDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLE 446
H+M + PD FTC+++VEG+ R GRL+SA+N VVELR+L + +E+ D+LIVSLC E
Sbjct: 371 HEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQE 430
Query: 447 DRPFAAKSVLERII-KDGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDS 506
+PFAAK +L+RII ++G + YN LIES R + EAL+LK ++ +N L +
Sbjct: 431 GKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKT 490
Query: 507 YKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFA 566
Y+ LI CLC I R+ + E LM EM +S V PD IC L+ GYCKE + KAE LL FA
Sbjct: 491 YRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFA 550
Query: 567 KDFEFFDTESFNALVKFHRDFG-NETELMQLQDRMLKVGFVPNSLTCRYVIHGL 615
+F FD ES+N+LVK + G + ++LQ+RM ++GFVPN LTC+Y+I L
Sbjct: 551 MEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
BLAST of CmoCh04G028180 vs. TAIR 10
Match:
AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 241.1 bits (614), Expect = 2.4e-63
Identity = 151/507 (29.78%), Postives = 243/507 (47.93%), Query Frame = 0
Query: 113 LAFFNWVKFDLGITLSS--QNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVF 172
L F WV G+ Q C+ HIL +R + A L EL +S S VF
Sbjct: 94 LKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS----GKSSFVF 153
Query: 173 HNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLA 232
L+ CN NP ++++LI+ Y++ MIQ+S E F+ M GF PSV CN IL +
Sbjct: 154 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 213
Query: 233 KMKCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVV 292
K D W +EM + + + TFNIL VLC G K + ++KME+ G+ P +V
Sbjct: 214 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 273
Query: 293 TYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRM 352
TYNT+++ YC++GR A L M +GV D+ +Y L++ LC+ R+ + + L M
Sbjct: 274 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 333
Query: 353 IDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRL 412
R + P+ V YNTLIN + +G++ A LL++M G+ P+ T +++G+ G
Sbjct: 334 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 393
Query: 413 ISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKL 472
AL + + G + Y L+ LC A+ R+ ++G Y +
Sbjct: 394 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 453
Query: 473 IESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGV 532
I+ C+ + EA++L +EM K I +Y LI+ C + R + ++ + G+
Sbjct: 454 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 513
Query: 533 LPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQ 592
P+ I LI C+ G + +A + + + D +FN LV G E +
Sbjct: 514 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 573
Query: 593 LQDRMLKVGFVPNSLTCRYVIHGLWKS 618
M G +PN+++ +I+G S
Sbjct: 574 FMRCMTSDGILPNTVSFDCLINGYGNS 596
BLAST of CmoCh04G028180 vs. TAIR 10
Match:
AT1G09820.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 239.2 bits (609), Expect = 9.1e-63
Identity = 143/505 (28.32%), Postives = 256/505 (50.69%), Query Frame = 0
Query: 113 LAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHN 172
L +++W+ + I++S + ++H LA ++++S FL + D+ S +FH
Sbjct: 85 LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHS--IFHA 144
Query: 173 LVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKM 232
+ +C C N +I +ML+ AY + +E+FK+ G+ S ++C ++ L K
Sbjct: 145 ISMCDNVC-VNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKE 204
Query: 233 KCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTY 292
A +Y+EM R + N +TFN++ LC+ G +NK + +E M+ G P+VV+Y
Sbjct: 205 NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSY 264
Query: 293 NTLINSYCR---RGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHR 352
NTLI+ YC+ G++ A + + M V P+L ++ L++G K + + ++F
Sbjct: 265 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 324
Query: 353 MIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGR 412
M+D+++ P+V+ YN+LIN C G++ EA S+ M G+ P+ T ++ G+ +
Sbjct: 325 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 384
Query: 413 LISALNLVVELRKLGTIVTYEIYDYLIVSLC---LEDRPFAAKSVLERIIKDGFQPNACI 472
L AL++ ++ G + T +Y+ LI + C D FA K +ER +G P+
Sbjct: 385 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER---EGIVPDVGT 444
Query: 473 YNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMV 532
YN LI CR N+ A L ++ + + ++ L+ C S L+ EM
Sbjct: 445 YNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMS 504
Query: 533 ESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEF-FDTESFNALVKFHRDFGNE 592
+ G+ P H +++ GYCKEGN+ A ++ K+ + S+N L++ + G
Sbjct: 505 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 564
Query: 593 TELMQLQDRMLKVGFVPNSLTCRYV 611
+ L + ML+ G VPN +T V
Sbjct: 565 EDANMLLNEMLEKGLVPNRITYEIV 582
BLAST of CmoCh04G028180 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 239.2 bits (609), Expect = 9.1e-63
Identity = 151/525 (28.76%), Postives = 261/525 (49.71%), Query Frame = 0
Query: 99 SKIILRCQSNFVSVLAFFNWVKFDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIEL 158
S ++L+ Q++ +L F NW TL + C+ +HIL + + A ++
Sbjct: 52 SNLLLKSQNDQALILKFLNWANPHQFFTLRCK--CITLHILTKFKLYKTAQILAEDVAAK 111
Query: 159 SKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPS 218
+ D+ S VF +L + C +F++++K+Y ++ +I ++ GF+P
Sbjct: 112 TLDDEYASL-VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPG 171
Query: 219 VIACNCILNGLAKMKCDAQCWE-LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFL 278
V++ N +L+ + K + E +++EM V N +T+NIL C G+++
Sbjct: 172 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 231
Query: 279 EKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKL 338
+KME +G P+VVTYNTLI+ YC+ ++DD F L R M +G+ P+L+SY ++NGLC+
Sbjct: 232 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 291
Query: 339 GRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTC 398
GR++E + M R D V YNTLI YCK+G +A + +M R G+ P T
Sbjct: 292 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 351
Query: 399 RIMVEGYGRGGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIK 458
++ + G + A+ + ++R G Y L+ + A VL +
Sbjct: 352 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 411
Query: 459 DGFQPNACIYNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVD 518
+GF P+ YN LI C + +A+ + +M ++ + SY ++S C RS D
Sbjct: 412 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC---RSYD 471
Query: 519 -GEGLMV--EMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNA 578
E L V EMVE G+ PD LI G+C++ +A L + D ++ A
Sbjct: 472 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 531
Query: 579 LVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSAR 620
L+ + G+ + +QL + M++ G +P+ +T +I+GL K +R
Sbjct: 532 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
BLAST of CmoCh04G028180 vs. TAIR 10
Match:
AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 238.8 bits (608), Expect = 1.2e-62
Identity = 157/636 (24.69%), Postives = 291/636 (45.75%), Query Frame = 0
Query: 23 PKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTNLSLL 82
P N +++SS F PS S + + + + +VE + LK N N
Sbjct: 20 PLKNLTTSSSPVFEPSSSSSSSSSSAS-------FSVSDSFLVEKICFSLKQGNNN---- 79
Query: 83 QSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVKFDL-GITLSSQNYCLIIHILAW 142
++ L L V +++ RC+++ F + + F +S + +IHIL
Sbjct: 80 ---VRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVR 139
Query: 143 SRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLIKAYVKVHMIQ 202
S + S A L +I S ++ ++L +C N +F++LI+ YV+ ++
Sbjct: 140 SGRLSDAQSCLLRMIRRS---GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLR 199
Query: 203 ESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILT 262
E++E+F + GF S+ ACN ++ L ++ W +Y+E+ R GV N YT NI+
Sbjct: 200 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 259
Query: 263 YVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYCRRGRLDDAFYLYRIMFRRGVM 322
LC+ G + KV FL +++E+G PD+VTYNTLI++Y +G +++AF L M +G
Sbjct: 260 NALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 319
Query: 323 PDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSL 382
P + +Y +++NGLCK G+ A ++F M+ L PD Y +L+ CK G + E +
Sbjct: 320 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 379
Query: 383 LHDM-----------------------------------TRIGICPDSFTCRIMVEGYGR 442
DM G+ PD+ I+++GY R
Sbjct: 380 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 439
Query: 443 GGRLISALNLVVELRKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACI 502
G + A+NL E+ + G + Y+ ++ LC A + + + P++
Sbjct: 440 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 499
Query: 503 YNKLIESFCRVHNVSEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMV 562
LI+ C++ N+ A+ L +M ++ +L + +Y L+ + + + +MV
Sbjct: 500 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 559
Query: 563 ESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNET 622
+LP +L+N C +G++ +A + N+++K + GN +
Sbjct: 560 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 619
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FND8 | 6.2e-173 | 51.18 | Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX... | [more] |
Q9LVQ5 | 3.4e-62 | 29.78 | Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 1.3e-61 | 28.76 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
O04504 | 1.3e-61 | 28.32 | Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX... | [more] |
Q9LFC5 | 1.7e-61 | 24.69 | Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E7L8 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1JUZ7 | 0.0e+00 | 96.68 | pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita maxima OX=366... | [more] |
A0A0A0KSF1 | 7.1e-297 | 80.09 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523120 PE=4 SV=1 | [more] |
A0A1S3C995 | 3.6e-293 | 79.59 | pentatricopeptide repeat-containing protein At5g40400 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5D3BTR0 | 8.1e-293 | 79.43 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_022922085.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At5g40400 [Cucurbita moschata] | [more] |
KAG7033098.1 | 0.0e+00 | 98.26 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023535833.1 | 0.0e+00 | 97.79 | pentatricopeptide repeat-containing protein At5g40400 [Cucurbita pepo subsp. pep... | [more] |
KAG6602420.1 | 0.0e+00 | 98.26 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022991028.1 | 0.0e+00 | 96.68 | pentatricopeptide repeat-containing protein At5g40400 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
AT5G40400.1 | 4.4e-174 | 51.18 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G55840.1 | 2.4e-63 | 29.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G09820.1 | 9.1e-63 | 28.32 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT5G39710.1 | 9.1e-63 | 28.76 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G01110.1 | 1.2e-62 | 24.69 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |