CmoCh04G026840 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G026840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Amino acid transporter, putative
Location	Cmo_Chr04: 19538117 .. 19542536 (+)
RNA-Seq Expression	CmoCh04G026840
Synteny	CmoCh04G026840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGGAAGTGTACCTTCTCCATCGTTGACTAGATTTGGAAGCTCGTTTCTTTCTTCCTCATTGACAAGGAGATTCACTCCTGAAGCATTCTCTACTTCCATAATAAAACCACTGCTATCCACAGTAGTAGACCAGCCTCAAAAGCATGCCTCTCATTCCCATCTCAGCCTTCCTTCCCGGCGCTCGTCCTTATCCGTGAGGAGGGATGAGAAAGACAACCTCGCCATCGACTCTCATGGCCTCCCCATTTCTAGCCATAGCTCTTTTGGCCAAGCTGTCGCCAATGGTAACTAAAATTTGATTTGAGATATAAAGTTAGTGGTATAATATCAGTTAAATTCTTTTTTTTTCTATTAGTAATATATTTTATGGAGTTAGTTGGTAACTTGTATCTGTGACCATTAATGAATATAGTGTTAGGAATAATAAATCTCTAATGGTATGACATATTGTCCACTTTGAGTATAAGTTATGACGACCTCATGCCAATGAAAATGTATTTCTTACTTGATCCTACGATCATTCTCTAAATTAGTCAATGTAGGCTCCCTCCCAACAATTCTCTCCTTGGACAAAGTAATGATTTTTATACCAGGCTAGGAATAATGGATCTCCACAATTTTGTGTTTATTGTGAAAGTGATTGAGGTTGAAATGCAGGCATGAATGCGCTATGTGGGGTGGGATTACTGTCGACTCCATACGCTATGAAGGAAGGAGGATGGTTGGGGATATCCATTTTGTTGATATTCGCTGTGCTTTCTTTCTACACTGGTATCCTATTGCGTGCTTGTTTGGATAGTAAGCCAGGTATCGAAACTTACCCTGACATTGGCCAAGCTGCTTTTGGTGCCCTTGGTCGTGTCCTCATCTCGGTAAAACTCCCTTTCTATTCTATTTAACTTTCTAAGAAATATAACATTGTTTAACCCAAAAGCAAAGAGTTAATAAATTAAAATTAGATTTAAATTTTTTTATGTTTTTTTCTTCTTCTTTATATTAAGATCTTTTTTTTTTAAATTACAATAAATATTATATTATGAGGTAGCTGATTGTTTAAGATATGGTTTTGGTTGGTTGTGGATGCAGATAGTATTGTATGTGGAATTATACGTAAGTACTCCTTCTCGACTCCCGCTTTTAATTTTTTTAATTTTTTAATTTTTTAAATTATTGTCATACGTCACACACACAGCAAGTGGCAACTCTCTGGTCCGCCAGCGCTCTTAATGACTTACAACCAATTTATTTAGGTTGATTAGCTAAGCCAATGTTAATTAATATATATTTTTTTTTTTGAAAAAAATAAGAGTTAATATGCTTCTTTGTATTTCTTACCCTTATTTGTCTGCCGGCTTCCATTTAGAAAATGAAATTTTAACACGAACATAAAAAGAAAGATCCGTTCAAAGTTTTGTTTAACATATTTAGAATCATGTAACTTTGTTTAGTGTTATAGGTATGTTATATATGGAGATGTTTGTTTTATCTACGAGACTTCCTCGAATGTGAAGGAAATTACCATAAGGGAACATTTTTTTTCCTTTAAATGGGCCCGCTCCATCTTGTTTAATATATATACATTTTTTCAACACATTATATTTTATATATGTGTATATATATATATATATTAAAAAATAAATAAATAAAATTTAAAATTATAATGATACATTTTTTTAATTGTTAAAGATTATATTGTAAAATTTTAAACTTTGAAATTTTACTAATAACATTGATAGAATATTATATAGGAATATATTGGATTATTAAGATCTTTTTCATAATTTTCTTTTAAAACATTATATTAAAATGAATGACGTGAGAATGCTATCAATATATAATATAAATAAATTATATTTGGGTTTGGTTCTAATTATATTACATGAGAAAAGCTAACGCTTACTCCTCTCGTTCATTTTTTCTAAGAAATGGAAAGCTTATTCATGATCTCTAAGGAAATCTGCATTATCCATGCTAATATTATTGTATGGTGCTTGTGATGCTAATGCAACGATATTTCATTTTTGTAATGATGTTGAAACAACAAATTAGGCCTATTGTTGACGAAGTGACCTAACTAGATATGCTCGTCTTGCAGGCTTCTTGTATTGAGTACGTAATTCTGGAGAGCGACAACCTCTCTACCTTGTTTCCCAGTGCACACATTACTTTTGGCGGATTCAAGTTAAATGCGCACCTTTTATTCGCTATAGCGACTGCCCTTGCTGTTCTTCCCACCGTTTGGCTTCGAGATCTCAGTATTTTAAGTTATATCTCTGGTAAGCACAATAGTATGATATTGTCCATTTTGAACATAACCTCTCATGACTTTACTTTGAGCTTTCCCAAAAAACCCTGTACCAATAAAGATGTATTACTTACCTAGAATATAAATTCATGATCTGGCATGTGGACTCAACAATCGTGATTTTTACTATAAAATGCCCCTATTTTGCAGCTGGTGGAGTTATTGCATCAATCGTGGTGGTTGTATGCTTGTTTTGGGTTGGGGTGGTAGATAACGTCGGCTTCCATGGCACGGTGACTCCTCTGAACCTCTCAACTCTCCCTGTTGCTCTGGGTCTTTACGGTTTCTGCTACTCAGGACATGCTGTATTTCCCAACATCTATAGTTCAATGGGTAAACAAAGCCAATTCCCTGCAGTTCTTTTGACATGGTAATTTTATATCTCCATCCATTTTCACAAACAATTAGGCATCATTCTTAAGGACCTCTGAAGTATTAATCGTTTAAGCCTTGTTATAGTTCTGGAGAAACTCCATGTGTCTACACGTCTTCGTTAGTCTGTGTTGAGGATTGTTGGAAGTGGAAGATCATGGGTTTATAACTGAGGAATACTATCTCAATTGGTATGAGGCCTTTTGGGGAAGCTGAAAAGCCATGAGAGCTTATGCTCAAAGTGAACAATATCATACTATTGTGGAGATCTGTGATTCCTAATATGGTATCAAAGTCATGCCCTTAACTTAGTCATGTCAATAGAATCCTAAGGGTCGAACAAAAAAGTTGTGAGTCTCGAAAGTGTAGTCAAAAGTGACTCAAGTGTTGAACAAAGGGTGTACTTTATTTGGATGCTCTAGAAAAGGAGTCGAGTCTCAATTAAGAAGAAGCTGTTCGATGGCTCCATAGGCCTTAGGGGAGGCTCTATAGTGTACGGAATATATCTCCATGAGGCCTTCATTTGTCACCCTTTTGAATGGAGGCATAAAGAAAAACAATCATCCATGTTAACAATAACACCATTTACTTTCTTTATGAATGCAGTTTTGGCATTTGTACTTTGATGTATGCTTGTGTTGCTATTATGGGATACTTAATGTTTGGAGAATCAACATTATCCCAATACACACTAAACCTGCCCGGGGATTTGGTTGCCTCAAAGATTGCTGTCTGGACTACGGTAAGCTGGTAAATTTCTACTGTCACTACTCTGTTCAAACCAATTTCTCACGTTTCTTATTTGTTCTTTGGCAGGTAATAAACCCATTTACCAAATATCCTTTCAGAGTCTGATATATACTTGTTACTCACTGTACTTAAATTTTCGTTTGTCCTGTTTTTGCTTCACCCTAAGTTCTGCAACCATATTTGAACCAGAAGTTTAATATTTCTCCTTAATTAGTCCCACGTATGCATTAACAATATCTCCAGTGGCAATGAGTCTGGAGGAGTTCATTCCACCAAACCACCCCAAGTCTCATATTTATTCCATCCTTATTAGAACAGCTCTTGTAATATCTACCTTACTGGTCGGTCTGTCTATCCCCTTTTTTGGTATGTACATTTCTTGTTCCATGCCAATTTCTGATGAGAAAATGCCCTTTTGGCCTTGGAGACATGATTAAATTTTTTTGCATGCAGGTCTTGTGATGTCTTTGATTGGGTCATTACTGACCATGCTAGTGGTAAGTTTGCTGATCTTTGAGAATTGTTGGAGGTTGTCCCATGTTGGCTAATTAGGGAATGATCATGGGTTTATAAGTAAGGAATACATCTCCATTGGTATGAAGTCTTTTGGGGAAGTCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCAGTGTGGAGAGTCGTTATTCCTAACAAAGCCTTGCTGGAACTAACTCGTCAAATTTGTATTGCAGACTTTGATACTCCCTTGCGCCTGTTACCTCAGAATTTTGAAGGAGAAAGTACCATTTTTGCAGGTAAAAACGTCCTCTTCATTGTGTTTTCTTTTATTTGCATACTAGAACTTGCGTAATTAGAAGACTCTCCCTTTTGTTTTTCTTGTTCTTTTACAGAGAGCACTTTGTTTCATAGTTATAGCAATAGGAGCTGTTGCATCAGCATTTGGATCATATTCATCTCTAAGGAAAATCATTGAGAAATTGAATGGCTGA

mRNA sequence

ATGCTCGGAAGTGTACCTTCTCCATCGTTGACTAGATTTGGAAGCTCGTTTCTTTCTTCCTCATTGACAAGGAGATTCACTCCTGAAGCATTCTCTACTTCCATAATAAAACCACTGCTATCCACAGTAGTAGACCAGCCTCAAAAGCATGCCTCTCATTCCCATCTCAGCCTTCCTTCCCGGCGCTCGTCCTTATCCGTGAGGAGGGATGAGAAAGACAACCTCGCCATCGACTCTCATGGCCTCCCCATTTCTAGCCATAGCTCTTTTGGCCAAGCTGTCGCCAATGGCATGAATGCGCTATGTGGGGTGGGATTACTGTCGACTCCATACGCTATGAAGGAAGGAGGATGGTTGGGGATATCCATTTTGTTGATATTCGCTGTGCTTTCTTTCTACACTGGTATCCTATTGCGTGCTTGTTTGGATAGTAAGCCAGGTATCGAAACTTACCCTGACATTGGCCAAGCTGCTTTTGGTGCCCTTGGTCGTGTCCTCATCTCGAATCATGTAACTTTGTTTAGTGTTATAGCTGGTGGAGTTATTGCATCAATCGTGGTGGTTGTATGCTTGTTTTGGGTTGGGGTGGTAGATAACGTCGGCTTCCATGGCACGGTGACTCCTCTGAACCTCTCAACTCTCCCTGTTGCTCTGGGTCTTTACGGTTTCTGCTACTCAGGACATGCTGTATTTCCCAACATCTATAGTTCAATGGGTAAACAAAGCCAATTCCCTGCAGTTCTTTTGACATGTTTTGGCATTTGTACTTTGATGTATGCTTGTGTTGCTATTATGGGATACTTAATGTTTGGAGAATCAACATTATCCCAATACACACTAAACCTGCCCGGGGATTTGGTTGCCTCAAAGATTGCTGTCTGGACTACGAGAGCACTTTGTTTCATAGTTATAGCAATAGGAGCTGTTGCATCAGCATTTGGATCATATTCATCTCTAAGGAAAATCATTGAGAAATTGAATGGCTGA

Coding sequence (CDS)

ATGCTCGGAAGTGTACCTTCTCCATCGTTGACTAGATTTGGAAGCTCGTTTCTTTCTTCCTCATTGACAAGGAGATTCACTCCTGAAGCATTCTCTACTTCCATAATAAAACCACTGCTATCCACAGTAGTAGACCAGCCTCAAAAGCATGCCTCTCATTCCCATCTCAGCCTTCCTTCCCGGCGCTCGTCCTTATCCGTGAGGAGGGATGAGAAAGACAACCTCGCCATCGACTCTCATGGCCTCCCCATTTCTAGCCATAGCTCTTTTGGCCAAGCTGTCGCCAATGGCATGAATGCGCTATGTGGGGTGGGATTACTGTCGACTCCATACGCTATGAAGGAAGGAGGATGGTTGGGGATATCCATTTTGTTGATATTCGCTGTGCTTTCTTTCTACACTGGTATCCTATTGCGTGCTTGTTTGGATAGTAAGCCAGGTATCGAAACTTACCCTGACATTGGCCAAGCTGCTTTTGGTGCCCTTGGTCGTGTCCTCATCTCGAATCATGTAACTTTGTTTAGTGTTATAGCTGGTGGAGTTATTGCATCAATCGTGGTGGTTGTATGCTTGTTTTGGGTTGGGGTGGTAGATAACGTCGGCTTCCATGGCACGGTGACTCCTCTGAACCTCTCAACTCTCCCTGTTGCTCTGGGTCTTTACGGTTTCTGCTACTCAGGACATGCTGTATTTCCCAACATCTATAGTTCAATGGGTAAACAAAGCCAATTCCCTGCAGTTCTTTTGACATGTTTTGGCATTTGTACTTTGATGTATGCTTGTGTTGCTATTATGGGATACTTAATGTTTGGAGAATCAACATTATCCCAATACACACTAAACCTGCCCGGGGATTTGGTTGCCTCAAAGATTGCTGTCTGGACTACGAGAGCACTTTGTTTCATAGTTATAGCAATAGGAGCTGTTGCATCAGCATTTGGATCATATTCATCTCTAAGGAAAATCATTGAGAAATTGAATGGCTGA

Protein sequence

MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPSRRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLGISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLISNHVTLFSVIAGGVIASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQSQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTTRALCFIVIAIGAVASAFGSYSSLRKIIEKLNG

Homology

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BLAST of CmoCh04G026840 vs. ExPASy Swiss-Prot
Match: F4IUW3 (Amino acid transporter AVT1C OS=Arabidopsis thaliana OX=3702 GN=AVT1C PE=1 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.9e-93
Identity = 198/368 (53.80%), Postives = 238/368 (64.67%), Query Frame = 0


Query: 1   MLGSVPSP--------SLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQ---PQK 60
           +  SVPSP        S+TRFGSSFLSS L RR TPE+  T + KPLL    D+   P+ 
Sbjct: 65  LYSSVPSPGIGFLGNNSMTRFGSSFLSSGLIRRHTPESLPT-VTKPLLEEQADEQALPKH 124

Query: 61  HASHSHL--SLPSRRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLL 120
             S   L   +PSRR S+  R+DEK ++   SH +P+S +SS+GQAV NG+N LCGVG+L
Sbjct: 125 RLSSQGLLSPIPSRRGSM--RKDEKSSMV--SHEIPMSRNSSYGQAVLNGLNVLCGVGIL 184

Query: 121 STPYAMKEGGWLGISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLI 180
           STPYA KEGGWLG+ IL ++ +LSFYTGILLR CLDS+  +ETYPDIGQAAFG  GR+ +
Sbjct: 185 STPYAAKEGGWLGLMILFVYGLLSFYTGILLRYCLDSESDLETYPDIGQAAFGTTGRIFV 244

Query: 181 S----------------------------------------NHV---------------- 240
           S                                         H+                
Sbjct: 245 SIVLYLELYACCVEYIILESDNLSSLYPNAALSIGGFQLDARHLFALLTTLAVLPTVWLR 304

Query: 241 ---TLFSVIAGGVIASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGH 297
               L  + AGGVIAS++VV+CLFW+G+VD VG H   T LNLSTLPVA+GLYG+CYSGH
Sbjct: 305 DLSVLSYISAGGVIASVLVVLCLFWIGLVDEVGIHSKGTTLNLSTLPVAIGLYGYCYSGH 364

[Close]

BLAST of CmoCh04G026840 vs. ExPASy Swiss-Prot
Match: F4JE35 (Amino acid transporter AVT1B OS=Arabidopsis thaliana OX=3702 GN=AVT1B PE=3 SV=2)

HSP 1 Score: 326.6 bits (836), Expect = 3.1e-88
Identity = 191/363 (52.62%), Postives = 230/363 (63.36%), Query Frame = 0


Query: 1   MLGSVPSP--------SLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHAS 60
           M GSVPSP        S++R GSSF+SS+LTRR TPE+    + KPLL    ++  KH  
Sbjct: 68  MFGSVPSPNLGFLANSSMSRRGSSFMSSTLTRRHTPESL-PCVTKPLLED--EEAPKHKL 127

Query: 61  HSHLSLPSRRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYA 120
            +H  LPS+ SS  V           SH + IS+ SSFGQAV NG+N LCGVG+LSTPYA
Sbjct: 128 STHSLLPSKPSSSMV----------VSHDMGISNDSSFGQAVLNGVNVLCGVGILSTPYA 187

Query: 121 MKEGGWLGISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS---- 180
           +KEGGWLG+ IL  F +L FYTG+LLR CLDS P ++TYPDIG AAFG+ GR+L+S    
Sbjct: 188 VKEGGWLGLIILFAFGILCFYTGLLLRYCLDSHPDVQTYPDIGHAAFGSTGRILVSVILY 247

Query: 181 ----------------NHVTLFS------------------------------------- 240
                           N  ++F                                      
Sbjct: 248 MELYAMSVEYIILEGDNLSSMFPNASLSIGGFHLDAPRLFALLTTLAVLPTVWLRDLSVL 307

Query: 241 --VIAGGVIASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPN 297
             + AGGVIAS++VV+CLFWVG+VD+VG H   TPLNL+TLPV++GLYG+CYSGH VFPN
Sbjct: 308 SYISAGGVIASVLVVLCLFWVGLVDDVGIHSKGTPLNLATLPVSVGLYGYCYSGHGVFPN 367

[Close]

BLAST of CmoCh04G026840 vs. ExPASy Swiss-Prot
Match: Q8GYS4 (Amino acid transporter AVT1D OS=Arabidopsis thaliana OX=3702 GN=AVT1D PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.3e-61
Identity = 139/343 (40.52%), Postives = 188/343 (54.81%), Query Frame = 0


Query: 16  SFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLP---SRRSSLSVRRDEK 75
           SF+  S +RR      ++S  K   S+  D     +S   LS P      + L V    +
Sbjct: 89  SFMPQSSSRR-----LASSFQKKQQSSFCDSLSSSSSKPLLSQPVPDKEETILPVNPQSQ 148

Query: 76  DNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLGISILLIFAVLSF 135
             L++    LP  +  SF Q+V NG N LCG+GL++ PYA+KE GWLG+ ILL F V++ 
Sbjct: 149 LKLSVTDLPLPEPNLCSFSQSVLNGTNVLCGLGLITMPYAIKESGWLGLPILLFFGVITC 208

Query: 136 YTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS------------------------ 195
           YTG+L++ CL+S PGI+TYPDIGQAAFG  GR +IS                        
Sbjct: 209 YTGVLMKRCLESSPGIQTYPDIGQAAFGITGRFIISILLYVELYAACVEYIIMMSDNLSG 268

Query: 196 ---------------NHVTLFSVI---------------------AGGVIASIVVVVCLF 255
                          +   +F+++                      GGV+ASI++ +CLF
Sbjct: 269 LFPNVSLSIASGISLDSPQIFAILTTLLVLPTVWLKDLSLLSYLSVGGVLASILLGICLF 328

Query: 256 WVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQSQFPAVLLTCF 296
           WVG VD +GFH T    +LS LPV +G++GF YSGH+VFPNIYSSM   S+FP VL+ CF
Sbjct: 329 WVGAVDGIGFHATGRVFDLSNLPVTIGIFGFGYSGHSVFPNIYSSMKDPSRFPLVLVICF 388

[Close]

BLAST of CmoCh04G026840 vs. ExPASy Swiss-Prot
Match: Q8LPF4 (Amino acid transporter AVT1E OS=Arabidopsis thaliana OX=3702 GN=AVT1E PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.8e-58
Identity = 143/355 (40.28%), Postives = 191/355 (53.80%), Query Frame = 0


Query: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 60
           +L  V  P+ T F SSF     +  F   +F++S  K  L    D+ Q     S  S  +
Sbjct: 58  LLTGVTPPTSTSFVSSFRQRRQSSVF--GSFTSSPSKQQLLIDKDEIQSSVVSSIKSFLA 117

Query: 61  RRSSLSVRRDEKDNLAIDSHGLPISSHS-SFGQAVANGMNALCGVGLLSTPYAMKEGGWL 120
               LSV  D            P  + S +F Q+V NG+N LCGV LL+ PYA+KEGGWL
Sbjct: 118 SHLQLSVPGDLL---------TPQENRSCTFSQSVLNGINVLCGVALLTMPYAVKEGGWL 177

Query: 121 GISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS----------- 180
           G+ IL  F +++FYTGILL+ CL++ PGI TYPDIGQAAFG  GR+L+S           
Sbjct: 178 GLFILFSFGIITFYTGILLKRCLENSPGIHTYPDIGQAAFGTTGRILVSILLYVELYASC 237

Query: 181 -----------------------------------------------NHVTLFSVI-AGG 240
                                                            ++L S + AGG
Sbjct: 238 VEYIIMMSDNLSRMFPNTSLYINGFSLDSTQVFAITTTLIVLPTVWLKDLSLLSYLSAGG 297

Query: 241 VIASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGK 296
           VI+SI++ +CLFW G VD VGFH +   L+++ +PVA+G+YGF +  H+VFPNIYSSM +
Sbjct: 298 VISSILLALCLFWAGSVDGVGFHISGQALDITNIPVAIGIYGFGFGSHSVFPNIYSSMKE 357

[Close]

BLAST of CmoCh04G026840 vs. ExPASy Swiss-Prot
Match: F4IZW8 (Amino acid transporter AVT1F OS=Arabidopsis thaliana OX=3702 GN=AVT1F PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 6.4e-57
Identity = 141/344 (40.99%), Postives = 191/344 (55.52%), Query Frame = 0


Query: 20  SSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPSRRSSLSVRRDEKDNLAIDS 79
           S +  R T  +FS+SI     +++  +     ++S +S  S++  LS    EKD+++  S
Sbjct: 66  SFIQGRSTETSFSSSI-----ASLYKRRPTSIANSFVSSTSKQPLLS----EKDDVSFLS 125

Query: 80  HGLPIS---------SHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLGISILLIFAVL 139
             + +S         +  SF Q+V NG+N LCG+ LL+ PYA+KEGGWLG+ ILL FA++
Sbjct: 126 SQVGLSNTDLSYGEPNFCSFPQSVLNGINVLCGISLLTMPYAVKEGGWLGLCILLSFAII 185

Query: 140 SFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS---------------------- 199
           + YTGILL+ CL+S   + TYPDIGQAAFG  GR++IS                      
Sbjct: 186 TCYTGILLKRCLESSSDLRTYPDIGQAAFGFTGRLIISILLYMELYVCCVEYIIMMSDNL 245

Query: 200 ------------------------------------NHVTLFSVI-AGGVIASIVVVVCL 259
                                                 ++L S + AGGV  SI++ +CL
Sbjct: 246 SRVFPNITLNIVGVSLDSPQIFAISATLIVLPTVWLKDLSLLSYLSAGGVFVSILLALCL 305

Query: 260 FWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQSQFPAVLLTC 296
           FWVG VD VGFH     L+L+ LPVA+G++GF +SGHAV P+IYSSM + S+FP VLL  
Sbjct: 306 FWVGSVDGVGFHTGGKALDLANLPVAIGIFGFGFSGHAVLPSIYSSMKEPSKFPLVLLIS 365

[Close]

BLAST of CmoCh04G026840 vs. ExPASy TrEMBL
Match: A0A6J1H171 (amino acid transporter AVT1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459494 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.9e-153
Identity = 323/478 (67.57%), Postives = 324/478 (67.78%), Query Frame = 0


Query: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 60
           MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS
Sbjct: 110 MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 169

Query: 61  RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 120
           RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG
Sbjct: 170 RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 229

Query: 121 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS------------ 180
           ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS            
Sbjct: 230 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLISIVLYVELYASCI 289

Query: 181 --------NHVTLFS---------------------------------------VIAGGV 240
                   N  TLF                                        + AGGV
Sbjct: 290 EYVILESDNLSTLFPSAHITFGGFKLNAHLLFAIATALAVLPTVWLRDLSILSYISAGGV 349

Query: 241 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 300
           IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ
Sbjct: 350 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 409

Query: 301 SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTT----- 329
           SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTT     
Sbjct: 410 SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTTVINPF 469

[Close]

BLAST of CmoCh04G026840 vs. ExPASy TrEMBL
Match: A0A6J1H2S5 (amino acid transporter AVT1C-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459494 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 6.3e-148
Identity = 291/355 (81.97%), Postives = 292/355 (82.25%), Query Frame = 0


Query: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 60
           MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS
Sbjct: 110 MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 169

Query: 61  RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 120
           RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG
Sbjct: 170 RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 229

Query: 121 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS------------ 180
           ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS            
Sbjct: 230 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLISIVLYVELYASCI 289

Query: 181 --------NHVTLFS---------------------------------------VIAGGV 240
                   N  TLF                                        + AGGV
Sbjct: 290 EYVILESDNLSTLFPSAHITFGGFKLNAHLLFAIATALAVLPTVWLRDLSILSYISAGGV 349

Query: 241 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 297
           IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ
Sbjct: 350 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 409

[Close]

BLAST of CmoCh04G026840 vs. ExPASy TrEMBL
Match: A0A6J1JRP7 (amino acid transporter AVT1C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487215 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.4e-147
Identity = 313/478 (65.48%), Postives = 315/478 (65.90%), Query Frame = 0


Query: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 60
           MLGSV SPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHA HSHL LPS
Sbjct: 67  MLGSVHSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHAPHSHLGLPS 126

Query: 61  RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 120
           RRSSLS+RRDEKDN AIDSHGLPIS HSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG
Sbjct: 127 RRSSLSMRRDEKDNPAIDSHGLPISRHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 186

Query: 121 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS------------ 180
           ISILLIFAVLSFYTGILLR CLDSKPGIETYPDIGQAAFGALGRVLIS            
Sbjct: 187 ISILLIFAVLSFYTGILLRVCLDSKPGIETYPDIGQAAFGALGRVLISIVLYVELYASCI 246

Query: 181 --------NHVTLFS---------------------------------------VIAGGV 240
                   N  TLF                                        + AGGV
Sbjct: 247 EYVILESDNLSTLFPSVHITFGGFELNAHLLFAIATALAVLPTVWLRDLSILSYISAGGV 306

Query: 241 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 300
           IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ
Sbjct: 307 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 366

Query: 301 SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTT----- 329
           SQFPAVL TCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDL ASKIAVWTT     
Sbjct: 367 SQFPAVLFTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLAASKIAVWTTVINPF 426

[Close]

BLAST of CmoCh04G026840 vs. ExPASy TrEMBL
Match: A0A6J1JPR1 (amino acid transporter AVT1C-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487215 PE=3 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 1.0e-142
Identity = 282/355 (79.44%), Postives = 284/355 (80.00%), Query Frame = 0


Query: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 60
           MLGSV SPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHA HSHL LPS
Sbjct: 67  MLGSVHSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHAPHSHLGLPS 126

Query: 61  RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 120
           RRSSLS+RRDEKDN AIDSHGLPIS HSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG
Sbjct: 127 RRSSLSMRRDEKDNPAIDSHGLPISRHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 186

Query: 121 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS------------ 180
           ISILLIFAVLSFYTGILLR CLDSKPGIETYPDIGQAAFGALGRVLIS            
Sbjct: 187 ISILLIFAVLSFYTGILLRVCLDSKPGIETYPDIGQAAFGALGRVLISIVLYVELYASCI 246

Query: 181 --------NHVTLFS---------------------------------------VIAGGV 240
                   N  TLF                                        + AGGV
Sbjct: 247 EYVILESDNLSTLFPSVHITFGGFELNAHLLFAIATALAVLPTVWLRDLSILSYISAGGV 306

Query: 241 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 297
           IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ
Sbjct: 307 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 366

[Close]

BLAST of CmoCh04G026840 vs. ExPASy TrEMBL
Match: A0A5A7T108 (Vacuolar amino acid transporter 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold147G00570 PE=3 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 1.1e-125
Identity = 270/451 (59.87%), Postives = 302/451 (66.96%), Query Frame = 0


Query: 1   MLGSVPSP--------SLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHA- 60
           MLGSV SP        SL RFGSSFLSSSLTRRFTPEAFS+SI KPLL TV+D P KHA 
Sbjct: 83  MLGSVHSPSIGLLGTSSLARFGSSFLSSSLTRRFTPEAFSSSISKPLLPTVIDDPHKHAP 142

Query: 61  SHSHLS--LPSRRSSLSVRRDEKDN-LAIDSHGLPISSHSSFGQAVANGMNALCGVGLLS 120
            HS L   LPSRRSS+S+RRD+KD  + IDSHGLP+S HS+FGQAV NG+N LCGVG+LS
Sbjct: 143 PHSPLGPPLPSRRSSISIRRDDKDKPVVIDSHGLPVSRHSTFGQAVVNGINVLCGVGILS 202

Query: 121 TPYAMKEGGWLGISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS 180
           TPYAMKEGGWLG+SIL+IFAVLSFYTGILLRACLDS+PG+ETYPDIGQAAFGA+GRV+IS
Sbjct: 203 TPYAMKEGGWLGLSILMIFAVLSFYTGILLRACLDSRPGLETYPDIGQAAFGAMGRVIIS 262

Query: 181 ------------------------------NHVTLFSVI--------------------- 240
                                         N   LF++                      
Sbjct: 263 ASCIEYVILESDNLSSLFPRAHISFGGLEINAHLLFAIATALAVLPTVYLRDLSILSYIS 322

Query: 241 AGGVIASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSS 300
           AGGV+ASIVVV+CLFWVG+VD+VGFHG VTPLNLS+LPVALGLYGFCYSGHAVFPNIYSS
Sbjct: 323 AGGVVASIVVVLCLFWVGLVDDVGFHGNVTPLNLSSLPVALGLYGFCYSGHAVFPNIYSS 382

Query: 301 MGKQSQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTT- 329
           MGKQSQFPAVLLTCFGICTL+YA VA+MGYLMFGESTLSQYTLNLP DLVASKIAVWTT 
Sbjct: 383 MGKQSQFPAVLLTCFGICTLLYAGVAVMGYLMFGESTLSQYTLNLPQDLVASKIAVWTTC 442

[Close]

BLAST of CmoCh04G026840 vs. NCBI nr
Match: XP_022958197.1 (amino acid transporter AVT1C-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 551.2 bits (1419), Expect = 6.0e-153
Identity = 323/478 (67.57%), Postives = 324/478 (67.78%), Query Frame = 0


Query: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 60
           MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS
Sbjct: 110 MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 169

Query: 61  RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 120
           RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG
Sbjct: 170 RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 229

Query: 121 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS------------ 180
           ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS            
Sbjct: 230 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLISIVLYVELYASCI 289

Query: 181 --------NHVTLFS---------------------------------------VIAGGV 240
                   N  TLF                                        + AGGV
Sbjct: 290 EYVILESDNLSTLFPSAHITFGGFKLNAHLLFAIATALAVLPTVWLRDLSILSYISAGGV 349

Query: 241 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 300
           IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ
Sbjct: 350 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 409

Query: 301 SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTT----- 329
           SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTT     
Sbjct: 410 SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTTVINPF 469

[Close]

BLAST of CmoCh04G026840 vs. NCBI nr
Match: KAG7032985.1 (Amino acid transporter AVT1C [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 545.0 bits (1403), Expect = 4.3e-151
Identity = 319/476 (67.02%), Postives = 321/476 (67.44%), Query Frame = 0


Query: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 60
           MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHL LPS
Sbjct: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLRLPS 60

Query: 61  RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 120
           RRSSLS+RRDEKDNLAIDSHGLPIS HSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG
Sbjct: 61  RRSSLSMRRDEKDNLAIDSHGLPISHHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 120

Query: 121 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS------------ 180
           ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS            
Sbjct: 121 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLISIVLYVELYASCI 180

Query: 181 --------NHVTLFS---------------------------------------VIAGGV 240
                   N  TLFS                                       + AGGV
Sbjct: 181 EYVILESDNLSTLFSSAHITFGGFKLNAHLLFAIATTLAVLPTVWLRDLSILSYISAGGV 240

Query: 241 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 300
           IASIVVVVCLFWVGVVDNVGFH TVTPLN STLPVALGLYGFCYSGHAVFPNIYSSMGKQ
Sbjct: 241 IASIVVVVCLFWVGVVDNVGFHATVTPLNFSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 300

Query: 301 SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTT----- 329
           SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTT     
Sbjct: 301 SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTTVSCPT 360

[Close]

BLAST of CmoCh04G026840 vs. NCBI nr
Match: XP_023539600.1 (amino acid transporter AVT1C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 540.0 bits (1390), Expect = 1.4e-149
Identity = 317/478 (66.32%), Postives = 323/478 (67.57%), Query Frame = 0


Query: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 60
           MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHAS+SHL  PS
Sbjct: 110 MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASYSHLGPPS 169

Query: 61  RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 120
           RRSSLS+RRDEKDNLAIDSHGLPIS HSSFGQAVANGMNALCGVGLLSTP+AMKEGGWLG
Sbjct: 170 RRSSLSMRRDEKDNLAIDSHGLPISRHSSFGQAVANGMNALCGVGLLSTPFAMKEGGWLG 229

Query: 121 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLI------------- 180
           ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLI             
Sbjct: 230 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLISIVLYVELYASCI 289

Query: 181 ---------------SNHVT----------LFSVI---------------------AGGV 240
                          S HVT          LF++                      AGGV
Sbjct: 290 EYVILESDNLSTLFPSAHVTFGGFELNAHLLFAIATALAVLPTVWLRDLSILSYISAGGV 349

Query: 241 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 300
           +ASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ
Sbjct: 350 VASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 409

Query: 301 SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTT----- 329
           SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTT     
Sbjct: 410 SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTTVINPF 469

[Close]

BLAST of CmoCh04G026840 vs. NCBI nr
Match: XP_022958205.1 (amino acid transporter AVT1C-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 533.5 bits (1373), Expect = 1.3e-147
Identity = 291/355 (81.97%), Postives = 292/355 (82.25%), Query Frame = 0


Query: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 60
           MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS
Sbjct: 110 MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 169

Query: 61  RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 120
           RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG
Sbjct: 170 RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 229

Query: 121 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS------------ 180
           ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS            
Sbjct: 230 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLISIVLYVELYASCI 289

Query: 181 --------NHVTLFS---------------------------------------VIAGGV 240
                   N  TLF                                        + AGGV
Sbjct: 290 EYVILESDNLSTLFPSAHITFGGFKLNAHLLFAIATALAVLPTVWLRDLSILSYISAGGV 349

Query: 241 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 297
           IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ
Sbjct: 350 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 409

[Close]

BLAST of CmoCh04G026840 vs. NCBI nr
Match: XP_022990304.1 (amino acid transporter AVT1C-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 532.3 bits (1370), Expect = 2.9e-147
Identity = 313/478 (65.48%), Postives = 315/478 (65.90%), Query Frame = 0


Query: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 60
           MLGSV SPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHA HSHL LPS
Sbjct: 67  MLGSVHSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHAPHSHLGLPS 126

Query: 61  RRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 120
           RRSSLS+RRDEKDN AIDSHGLPIS HSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG
Sbjct: 127 RRSSLSMRRDEKDNPAIDSHGLPISRHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLG 186

Query: 121 ISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS------------ 180
           ISILLIFAVLSFYTGILLR CLDSKPGIETYPDIGQAAFGALGRVLIS            
Sbjct: 187 ISILLIFAVLSFYTGILLRVCLDSKPGIETYPDIGQAAFGALGRVLISIVLYVELYASCI 246

Query: 181 --------NHVTLFS---------------------------------------VIAGGV 240
                   N  TLF                                        + AGGV
Sbjct: 247 EYVILESDNLSTLFPSVHITFGGFELNAHLLFAIATALAVLPTVWLRDLSILSYISAGGV 306

Query: 241 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 300
           IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ
Sbjct: 307 IASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQ 366

Query: 301 SQFPAVLLTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLVASKIAVWTT----- 329
           SQFPAVL TCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDL ASKIAVWTT     
Sbjct: 367 SQFPAVLFTCFGICTLMYACVAIMGYLMFGESTLSQYTLNLPGDLAASKIAVWTTVINPF 426

[Close]

BLAST of CmoCh04G026840 vs. TAIR 10
Match: AT2G39130.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 344.0 bits (881), Expect = 1.4e-94
Identity = 198/368 (53.80%), Postives = 238/368 (64.67%), Query Frame = 0


Query: 1   MLGSVPSP--------SLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQ---PQK 60
           +  SVPSP        S+TRFGSSFLSS L RR TPE+  T + KPLL    D+   P+ 
Sbjct: 65  LYSSVPSPGIGFLGNNSMTRFGSSFLSSGLIRRHTPESLPT-VTKPLLEEQADEQALPKH 124

Query: 61  HASHSHL--SLPSRRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLL 120
             S   L   +PSRR S+  R+DEK ++   SH +P+S +SS+GQAV NG+N LCGVG+L
Sbjct: 125 RLSSQGLLSPIPSRRGSM--RKDEKSSMV--SHEIPMSRNSSYGQAVLNGLNVLCGVGIL 184

Query: 121 STPYAMKEGGWLGISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLI 180
           STPYA KEGGWLG+ IL ++ +LSFYTGILLR CLDS+  +ETYPDIGQAAFG  GR+ +
Sbjct: 185 STPYAAKEGGWLGLMILFVYGLLSFYTGILLRYCLDSESDLETYPDIGQAAFGTTGRIFV 244

Query: 181 S----------------------------------------NHV---------------- 240
           S                                         H+                
Sbjct: 245 SIVLYLELYACCVEYIILESDNLSSLYPNAALSIGGFQLDARHLFALLTTLAVLPTVWLR 304

Query: 241 ---TLFSVIAGGVIASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGH 297
               L  + AGGVIAS++VV+CLFW+G+VD VG H   T LNLSTLPVA+GLYG+CYSGH
Sbjct: 305 DLSVLSYISAGGVIASVLVVLCLFWIGLVDEVGIHSKGTTLNLSTLPVAIGLYGYCYSGH 364

[Close]

BLAST of CmoCh04G026840 vs. TAIR 10
Match: AT3G54830.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 326.6 bits (836), Expect = 2.2e-89
Identity = 191/363 (52.62%), Postives = 230/363 (63.36%), Query Frame = 0


Query: 1   MLGSVPSP--------SLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHAS 60
           M GSVPSP        S++R GSSF+SS+LTRR TPE+    + KPLL    ++  KH  
Sbjct: 68  MFGSVPSPNLGFLANSSMSRRGSSFMSSTLTRRHTPESL-PCVTKPLLED--EEAPKHKL 127

Query: 61  HSHLSLPSRRSSLSVRRDEKDNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYA 120
            +H  LPS+ SS  V           SH + IS+ SSFGQAV NG+N LCGVG+LSTPYA
Sbjct: 128 STHSLLPSKPSSSMV----------VSHDMGISNDSSFGQAVLNGVNVLCGVGILSTPYA 187

Query: 121 MKEGGWLGISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS---- 180
           +KEGGWLG+ IL  F +L FYTG+LLR CLDS P ++TYPDIG AAFG+ GR+L+S    
Sbjct: 188 VKEGGWLGLIILFAFGILCFYTGLLLRYCLDSHPDVQTYPDIGHAAFGSTGRILVSVILY 247

Query: 181 ----------------NHVTLFS------------------------------------- 240
                           N  ++F                                      
Sbjct: 248 MELYAMSVEYIILEGDNLSSMFPNASLSIGGFHLDAPRLFALLTTLAVLPTVWLRDLSVL 307

Query: 241 --VIAGGVIASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPN 297
             + AGGVIAS++VV+CLFWVG+VD+VG H   TPLNL+TLPV++GLYG+CYSGH VFPN
Sbjct: 308 SYISAGGVIASVLVVLCLFWVGLVDDVGIHSKGTPLNLATLPVSVGLYGYCYSGHGVFPN 367

[Close]

BLAST of CmoCh04G026840 vs. TAIR 10
Match: AT5G02170.2 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 238.8 bits (608), Expect = 6.1e-63
Identity = 143/326 (43.87%), Postives = 191/326 (58.59%), Query Frame = 0


Query: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 60
           +L  V  P+ T F SSF     +  F   +F++S  K  L    D+ Q     S  S  +
Sbjct: 58  LLTGVTPPTSTSFVSSFRQRRQSSVF--GSFTSSPSKQQLLIDKDEIQSSVVSSIKSFLA 117

Query: 61  RRSSLSVRRDEKDNLAIDSHGLPISSHS-SFGQAVANGMNALCGVGLLSTPYAMKEGGWL 120
               LSV  D            P  + S +F Q+V NG+N LCGV LL+ PYA+KEGGWL
Sbjct: 118 SHLQLSVPGDLL---------TPQENRSCTFSQSVLNGINVLCGVALLTMPYAVKEGGWL 177

Query: 121 GISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS---------NH 180
           G+ IL  F +++FYTGILL+ CL++ PGI TYPDIGQAAFG  GR+L+S         N 
Sbjct: 178 GLFILFSFGIITFYTGILLKRCLENSPGIHTYPDIGQAAFGTTGRILVSILLYVELYVNS 237

Query: 181 VTLFSVI---------------------AGGVIASIVVVVCLFWVGVVDNVGFHGTVTPL 240
             +F++                      AGGVI+SI++ +CLFW G VD VGFH +   L
Sbjct: 238 TQVFAITTTLIVLPTVWLKDLSLLSYLSAGGVISSILLALCLFWAGSVDGVGFHISGQAL 297

Query: 241 NLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQSQFPAVLLTCFGICTLMYACVAIMGYLM 296
           +++ +PVA+G+YGF +  H+VFPNIYSSM + S+FP VLL  F  CTL Y  VA+ G+ M
Sbjct: 298 DITNIPVAIGIYGFGFGSHSVFPNIYSSMKEPSKFPTVLLISFAFCTLFYIAVAVCGFTM 357

[Close]

BLAST of CmoCh04G026840 vs. TAIR 10
Match: AT5G02180.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 236.9 bits (603), Expect = 2.3e-62
Identity = 139/343 (40.52%), Postives = 188/343 (54.81%), Query Frame = 0


Query: 16  SFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLP---SRRSSLSVRRDEK 75
           SF+  S +RR      ++S  K   S+  D     +S   LS P      + L V    +
Sbjct: 89  SFMPQSSSRR-----LASSFQKKQQSSFCDSLSSSSSKPLLSQPVPDKEETILPVNPQSQ 148

Query: 76  DNLAIDSHGLPISSHSSFGQAVANGMNALCGVGLLSTPYAMKEGGWLGISILLIFAVLSF 135
             L++    LP  +  SF Q+V NG N LCG+GL++ PYA+KE GWLG+ ILL F V++ 
Sbjct: 149 LKLSVTDLPLPEPNLCSFSQSVLNGTNVLCGLGLITMPYAIKESGWLGLPILLFFGVITC 208

Query: 136 YTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS------------------------ 195
           YTG+L++ CL+S PGI+TYPDIGQAAFG  GR +IS                        
Sbjct: 209 YTGVLMKRCLESSPGIQTYPDIGQAAFGITGRFIISILLYVELYAACVEYIIMMSDNLSG 268

Query: 196 ---------------NHVTLFSVI---------------------AGGVIASIVVVVCLF 255
                          +   +F+++                      GGV+ASI++ +CLF
Sbjct: 269 LFPNVSLSIASGISLDSPQIFAILTTLLVLPTVWLKDLSLLSYLSVGGVLASILLGICLF 328

Query: 256 WVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGKQSQFPAVLLTCF 296
           WVG VD +GFH T    +LS LPV +G++GF YSGH+VFPNIYSSM   S+FP VL+ CF
Sbjct: 329 WVGAVDGIGFHATGRVFDLSNLPVTIGIFGFGYSGHSVFPNIYSSMKDPSRFPLVLVICF 388

[Close]

BLAST of CmoCh04G026840 vs. TAIR 10
Match: AT5G02170.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-59
Identity = 143/355 (40.28%), Postives = 191/355 (53.80%), Query Frame = 0


Query: 1   MLGSVPSPSLTRFGSSFLSSSLTRRFTPEAFSTSIIKPLLSTVVDQPQKHASHSHLSLPS 60
           +L  V  P+ T F SSF     +  F   +F++S  K  L    D+ Q     S  S  +
Sbjct: 58  LLTGVTPPTSTSFVSSFRQRRQSSVF--GSFTSSPSKQQLLIDKDEIQSSVVSSIKSFLA 117

Query: 61  RRSSLSVRRDEKDNLAIDSHGLPISSHS-SFGQAVANGMNALCGVGLLSTPYAMKEGGWL 120
               LSV  D            P  + S +F Q+V NG+N LCGV LL+ PYA+KEGGWL
Sbjct: 118 SHLQLSVPGDLL---------TPQENRSCTFSQSVLNGINVLCGVALLTMPYAVKEGGWL 177

Query: 121 GISILLIFAVLSFYTGILLRACLDSKPGIETYPDIGQAAFGALGRVLIS----------- 180
           G+ IL  F +++FYTGILL+ CL++ PGI TYPDIGQAAFG  GR+L+S           
Sbjct: 178 GLFILFSFGIITFYTGILLKRCLENSPGIHTYPDIGQAAFGTTGRILVSILLYVELYASC 237

Query: 181 -----------------------------------------------NHVTLFSVI-AGG 240
                                                            ++L S + AGG
Sbjct: 238 VEYIIMMSDNLSRMFPNTSLYINGFSLDSTQVFAITTTLIVLPTVWLKDLSLLSYLSAGG 297

Query: 241 VIASIVVVVCLFWVGVVDNVGFHGTVTPLNLSTLPVALGLYGFCYSGHAVFPNIYSSMGK 296
           VI+SI++ +CLFW G VD VGFH +   L+++ +PVA+G+YGF +  H+VFPNIYSSM +
Sbjct: 298 VISSILLALCLFWAGSVDGVGFHISGQALDITNIPVAIGIYGFGFGSHSVFPNIYSSMKE 357

The following BLAST results are available for this feature:

BLAST of CmoCh04G026840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IUW3	1.9e-93	53.80	Amino acid transporter AVT1C OS=Arabidopsis thaliana OX=3702 GN=AVT1C PE=1 SV=1	[more]
F4JE35	3.1e-88	52.62	Amino acid transporter AVT1B OS=Arabidopsis thaliana OX=3702 GN=AVT1B PE=3 SV=2	[more]
Q8GYS4	3.3e-61	40.52	Amino acid transporter AVT1D OS=Arabidopsis thaliana OX=3702 GN=AVT1D PE=2 SV=1	[more]
Q8LPF4	5.8e-58	40.28	Amino acid transporter AVT1E OS=Arabidopsis thaliana OX=3702 GN=AVT1E PE=2 SV=1	[more]
F4IZW8	6.4e-57	40.99	Amino acid transporter AVT1F OS=Arabidopsis thaliana OX=3702 GN=AVT1F PE=3 SV=1	[more]

BLAST of CmoCh04G026840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H171	2.9e-153	67.57	amino acid transporter AVT1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1H2S5	6.3e-148	81.97	amino acid transporter AVT1C-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1JRP7	1.4e-147	65.48	amino acid transporter AVT1C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1JPR1	1.0e-142	79.44	amino acid transporter AVT1C-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5A7T108	1.1e-125	59.87	Vacuolar amino acid transporter 1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of CmoCh04G026840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958197.1	6.0e-153	67.57	amino acid transporter AVT1C-like isoform X1 [Cucurbita moschata]	[more]
KAG7032985.1	4.3e-151	67.02	Amino acid transporter AVT1C [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023539600.1	1.4e-149	66.32	amino acid transporter AVT1C-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958205.1	1.3e-147	81.97	amino acid transporter AVT1C-like isoform X2 [Cucurbita moschata]	[more]
XP_022990304.1	2.9e-147	65.48	amino acid transporter AVT1C-like isoform X1 [Cucurbita maxima]	[more]

BLAST of CmoCh04G026840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39130.1	1.4e-94	53.80	Transmembrane amino acid transporter family protein	[more]
AT3G54830.1	2.2e-89	52.62	Transmembrane amino acid transporter family protein	[more]
AT5G02170.2	6.1e-63	43.87	Transmembrane amino acid transporter family protein	[more]
AT5G02180.1	2.3e-62	40.52	Transmembrane amino acid transporter family protein	[more]
AT5G02170.1	4.1e-59	40.28	Transmembrane amino acid transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 87..177 e-value: 3.1E-17 score: 62.4
None	No IPR available	PANTHER	PTHR48017	OS05G0424000 PROTEIN-RELATED	coord: 176..296 coord: 70..169
None	No IPR available	PANTHER	PTHR48017:SF37	AMINO ACID TRANSPORTER AVT1B	coord: 176..296 coord: 70..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G026840.1	CmoCh04G026840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006865	amino acid transport
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015293	symporter activity