CmoCh04G006200 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCCATGGCTGCTTTCAAGACCTTCATTTTCATCTTCCTCATCTTCACATGCCCTAATTCAGGTGCTTTTTTCACTTCACATGGATGATTTATGATTAGGGTTTCTCTTAATTTTATGCTAATTTCTTGTTTAGATCTGAATTTTTCAATGTTAAAAGGGAAATTAGGGTTTGTGTTCTTTTTTTTTTTTTTTTTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGGGGATGCTGATGGCCTGAGGTTGAAGGAAAGTTTGAAGCTACCAAACCCTTGTGGGCAGGTGAGAAAACCCTAATTAGGTTGGAACTTCGAATTTCAAAAACGTTCAAAATATTAACTTTATGAACGTTTAGGGCATGAGATCGACATCTTATCTAGACAACGTTAAGACTTATACGACTCTAAGTTTGTAAGGGAATGATTTAAGACGTCCACATTTAGAAAAATTTTACGTTTGAAGTGTAAGTTTGAGAACCGAGCTAAACTACTATTGAAAAATCCATGAATTTCATTAAACTTGGATAGGGTAAACAAAATTTGAAATCTTAAGCCAAATTGACTCTAGACCCGACACATCCCTTAAAATTTATTCGTGTTTGTATAAACTATAGACCCGATAGCGGAAAACCCTGATACTGATACCGATAGCTCAAATTTAGTGATAAACCCTTGAAAACATGATATATCAACTTTCTAATTAAGTTGGAACTTAATGAACGTTTAGGGCATGAGATCGACATCTTATCCTAGACAACGTTAAGACTCGAAGTGTATAGAAAAACTATGCATTTGAAGTGTAAGTTTAAAAACCCGGATGAACGACCATTGAAAAATCCATGAATTTCATCGATCTCGAATAGGGTAAACAAAATGTGAAATCTTAAGCCAAACCGAGTCTCACCCAAACGTTCACCCAACACAACCCTTAAAATTGTGTTTGTATAAACTATAGACCCGATAGTAGAAAACACTAGTATTGATATCGATAGCTCAAGTTAGTGATAAACCCTCAATAACAAATAGATATTCTTATTACGGGTCAAAGTCACGATCGATATGAACTTTGAAATTGCAGGTGATAATTGAAAAGAAAGGTGTAAGGAAGCTTTTGGGAGCAGAGGAATTGTTAGACTATGCAAGCCCAAGCCATAACCCAAGACATGAGCCAAGGGTTGGGAACCCTGGAGGAAGAGCCTAA ATGGCGTCCATGGCTGCTTTCAAGACCTTCATTTTCATCTTCCTCATCTTCACATGCCCTAATTCAGGGGATGCTGATGGCCTGAGGTTGAAGGAAAGTTTGAAGCTACCAAACCCTTGTGGGCAGGTGATAATTGAAAAGAAAGGTGTAAGGAAGCTTTTGGGAGCAGAGGAATTGTTAGACTATGCAAGCCCAAGCCATAACCCAAGACATGAGCCAAGGGTTGGGAACCCTGGAGGAAGAGCCTAA ATGGCGTCCATGGCTGCTTTCAAGACCTTCATTTTCATCTTCCTCATCTTCACATGCCCTAATTCAGGGGATGCTGATGGCCTGAGGTTGAAGGAAAGTTTGAAGCTACCAAACCCTTGTGGGCAGGTGATAATTGAAAAGAAAGGTGTAAGGAAGCTTTTGGGAGCAGAGGAATTGTTAGACTATGCAAGCCCAAGCCATAACCCAAGACATGAGCCAAGGGTTGGGAACCCTGGAGGAAGAGCCTAA MASMAAFKTFIFIFLIFTCPNSGDADGLRLKESLKLPNPCGQVIIEKKGVRKLLGAEELLDYASPSHNPRHEPRVGNPGGRA Homology
BLAST of CmoCh04G006200 vs. ExPASy TrEMBL
Match: A0A5D3D203 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003180 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 6.6e-22 Identity = 61/83 (73.49%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of CmoCh04G006200 vs. ExPASy TrEMBL
Match: A0A0A0KYH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055320 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21 Identity = 61/83 (73.49%), Postives = 64/83 (77.11%), Query Frame = 0
BLAST of CmoCh04G006200 vs. ExPASy TrEMBL
Match: A0A5A7TNM7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003170 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.1e-06 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 0
BLAST of CmoCh04G006200 vs. ExPASy TrEMBL
Match: A0A5J5A8H2 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_007784 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.5e-05 Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of CmoCh04G006200 vs. ExPASy TrEMBL
Match: A0A6A1ULL4 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004811 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-04 Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = 0
BLAST of CmoCh04G006200 vs. NCBI nr
Match: KAG6600409.1 (hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 166.4 bits (420), Expect = 1.0e-37 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0
BLAST of CmoCh04G006200 vs. NCBI nr
Match: KAG6577123.1 (hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 131.3 bits (329), Expect = 3.7e-27 Identity = 65/83 (78.31%), Postives = 69/83 (83.13%), Query Frame = 0
BLAST of CmoCh04G006200 vs. NCBI nr
Match: TYK16509.1 (hypothetical protein E5676_scaffold21G003180 [Cucumis melo var. makuwa]) HSP 1 Score: 112.8 bits (281), Expect = 1.4e-21 Identity = 61/83 (73.49%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of CmoCh04G006200 vs. NCBI nr
Match: KGN53437.1 (hypothetical protein Csa_015314 [Cucumis sativus]) HSP 1 Score: 112.1 bits (279), Expect = 2.3e-21 Identity = 61/83 (73.49%), Postives = 64/83 (77.11%), Query Frame = 0
BLAST of CmoCh04G006200 vs. NCBI nr
Match: KAG6600410.1 (hypothetical protein SDJN03_05643, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 69.7 bits (169), Expect = 1.3e-08 Identity = 41/81 (50.62%), Postives = 51/81 (62.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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