CmoCh01G004150 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G004150
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transmembrane protein 33 homolog
Location	Cmo_Chr01: 2021705 .. 2023628 (+)
RNA-Seq Expression	CmoCh01G004150
Synteny	CmoCh01G004150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGATCCTGATCTTGTAGTTGAGACAATGTCTTCCGGCAGTTCATCATTTCAGCCAGGGAGGCAGTCAGCACCTTCACCTCCTACAAATGATCAAACTCAGTCACAGAGCTCCGGTATGGGATTTATCATTAAGAAAGTTGCTTTCCAGAGCGGACTTGCATTGTAGATTACCATGTTTGTTACGCGATTTACTAATTGGGTTTCGTTTACACAATGTAGGGTCAACTACAAGAAATCCAGGAACATCGGCAACTACAGGTTCAAATTGGATGTATTTACGCTGGGATCGACATAGGGTTCTTTTTTTGGTCAATGCTTGGGTAAAGTGAAATTCTTCAGCCATCCTAATATTTAGAAGTGTGTCAAGTAGACCTCTTAAGAATTAGACTTTATTTGCAGAATCAAGTCGGGTTTACTGAACCTTACGGGTTGCCATTCGTTATTTCCTGTAGGTGTTTCTCTTGTCATCGTTGGCAGTGATGCCAATGGTTCCCAGAAACATTTCACATAGGGCGTATCAGATTTCTCTTATGGGCACTGCATGCTCCTCTCTATTCACCTTGTTCATTACTTGTGGGGTAAGTTTTTTGGTCAAGTAACTATTGCCTTCTAGTATACCTCAAGGTTTGTCTGACCTGTTTTATCTAGCAGATACCCAGGTCGTTCGATATGCAGGCTTTGGAAGTTTACTTCCGACCTGTCGTTGCAACAAAAGCTCTCGTCTACCTTATTTACTCCATTACCTTTGTAGCTTCAAATCTTTTCCTTAAACGTATAGCTGCTTTGCCTTTTACCCTTGTCTAACTTTATGCAGTTTTTGCTCAGTTATGCATGGTATAACGGTTTCTCCTTCGTTACAGTTGCTTTAATTCCGATTATATGCGTAGCTGTTGAGCAGATTTCCAAGTACGTTCGGCATAATTTCCCCCGATCTGCCTTCTACAGGTAAAGTGGCAAGGTTTCTCTCAAGTTAAATTGTTCACTTGTACAAGCTAAAGAGATTGGCTTAATCTGAGTATATGAACACAAAATAACTCATTTTGTTCTTAGTTTTCTCTATATAACTGAGCTGTGCTTGAACTTTCTTCACTTAATGATTACCATATATTTAGATTTGAATTTCACTTTCTGTGTGGATTGGAGCACTCATTGATCTGTTTGGTTGCTTAGGAAATGCTTGGAGCGGCCTTGTGCTTGGGTGGAATCAAATACAATCACACTTTGTCTTCTGTCTTCAAATGTTGAGATTGCACTGGGTTTCCTTCTGATCATCTCCTTATTCACGTCAGTTCCTCGTCGTCGTCTTTTTCGTTTTCCATCATTAACAATCATTTCATTCTGTAAATCCATCGCCTCGGTTTCTCTATGCAGATGGCAGCGAAACTTCGTGCAAACATTCATGTACTGGCAGGTTGGTTCCTTCTGTCTCTCGTTTGGCTTGCACGAAACAGCAGCGTGGCTAACTCGAGCACACCCATTTCAGAGTACTAACTTCCTTGAAACTGTGTGGTTTGCAGCTACTGAAGCTGATGTACCACTTCCCCTTGACTGCTGGGTATCATCAGAGTGCGTGGGCTAAGATTGGGAGAAAAGTTAATCCATTTGTGAGCAGATTTCTCCCATTTTTGAAGCCTTTACTCTCTGCAGCTCAAAGATGGTGGCTCAGGTAGAGAAACCAAGAATAAGAAAGTGGTTTCTGTTAGTTTGCATTTAGTTTACTGAATATATTCATTGTTTCTTAGAAGATAGTCACATATTCATGACAGAAGCTGCCCTCATGAACGAACCCTGTTGATTTGGGGTTTTTGTATGCATATTATGAAGCAGGGCAGGACTACTTGTTATGAATTATGATATTACTTTAGCAACTGAGATTTGTGATGATAATATGATATATATATACAACCTTTCAAGAATTA

mRNA sequence

ATGCAGGATCCTGATCTTGTAGTTGAGACAATGTCTTCCGGCAGTTCATCATTTCAGCCAGGGAGGCAGTCAGCACCTTCACCTCCTACAAATGATCAAACTCAGTCACAGAGCTCCGGGTCAACTACAAGAAATCCAGGAACATCGGCAACTACAGGTTCAAATTGGATGTATTTACGCTGGGATCGACATAGGGTTCTTTTTTTGGTCAATGCTTGGGTGTTTCTCTTGTCATCGTTGGCAGTGATGCCAATGGTTCCCAGAAACATTTCACATAGGGCGTATCAGATTTCTCTTATGGGCACTGCATGCTCCTCTCTATTCACCTTGTTCATTACTTGTGGGATACCCAGGTCGTTCGATATGCAGGCTTTGGAAGTTTACTTCCGACCTGTCGTTGCAACAAAAGCTCTCGTCTACCTTATTTACTCCATTACCTTTGTAGCTTCAAATCTTTTCCTTAAACTTGCTTTAATTCCGATTATATGCGTAGCTGTTGAGCAGATTTCCAAGTACGTTCGGCATAATTTCCCCCGATCTGCCTTCTACAGGAAATGCTTGGAGCGGCCTTGTGCTTGGGTGGAATCAAATACAATCACACTTTGTCTTCTGTCTTCAAATGTTGAGATTGCACTGGGTTTCCTTCTGATCATCTCCTTATTCACATGGCAGCGAAACTTCGTGCAAACATTCATGTACTGGCAGCTACTGAAGCTGATGTACCACTTCCCCTTGACTGCTGGGTATCATCAGAGTGCGTGGGCTAAGATTGGGAGAAAAGTTAATCCATTTGTGAGCAGATTTCTCCCATTTTTGAAGCCTTTACTCTCTGCAGCTCAAAGATGGTGGCTCAGGTAGAGAAACCAAGAATAAGAAAGTGGTTTCTGTTAGTTTGCATTTAGTTTACTGAATATATTCATTGTTTCTTAGAAGATAGTCACATATTCATGACAGAAGCTGCCCTCATGAACGAACCCTGTTGATTTGGGGTTTTTGTATGCATATTATGAAGCAGGGCAGGACTACTTGTTATGAATTATGATATTACTTTAGCAACTGAGATTTGTGATGATAATATGATATATATATACAACCTTTCAAGAATTA

Coding sequence (CDS)

ATGCAGGATCCTGATCTTGTAGTTGAGACAATGTCTTCCGGCAGTTCATCATTTCAGCCAGGGAGGCAGTCAGCACCTTCACCTCCTACAAATGATCAAACTCAGTCACAGAGCTCCGGGTCAACTACAAGAAATCCAGGAACATCGGCAACTACAGGTTCAAATTGGATGTATTTACGCTGGGATCGACATAGGGTTCTTTTTTTGGTCAATGCTTGGGTGTTTCTCTTGTCATCGTTGGCAGTGATGCCAATGGTTCCCAGAAACATTTCACATAGGGCGTATCAGATTTCTCTTATGGGCACTGCATGCTCCTCTCTATTCACCTTGTTCATTACTTGTGGGATACCCAGGTCGTTCGATATGCAGGCTTTGGAAGTTTACTTCCGACCTGTCGTTGCAACAAAAGCTCTCGTCTACCTTATTTACTCCATTACCTTTGTAGCTTCAAATCTTTTCCTTAAACTTGCTTTAATTCCGATTATATGCGTAGCTGTTGAGCAGATTTCCAAGTACGTTCGGCATAATTTCCCCCGATCTGCCTTCTACAGGAAATGCTTGGAGCGGCCTTGTGCTTGGGTGGAATCAAATACAATCACACTTTGTCTTCTGTCTTCAAATGTTGAGATTGCACTGGGTTTCCTTCTGATCATCTCCTTATTCACATGGCAGCGAAACTTCGTGCAAACATTCATGTACTGGCAGCTACTGAAGCTGATGTACCACTTCCCCTTGACTGCTGGGTATCATCAGAGTGCGTGGGCTAAGATTGGGAGAAAAGTTAATCCATTTGTGAGCAGATTTCTCCCATTTTTGAAGCCTTTACTCTCTGCAGCTCAAAGATGGTGGCTCAGGTAG

Protein sequence

MQDPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWDRHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDMQALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAFYRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR

Homology

[Close]

BLAST of CmoCh01G004150 vs. ExPASy TrEMBL
Match: A0A6J1GAW8 (uncharacterized protein LOC111452483 OS=Cucurbita moschata OX=3662 GN=LOC111452483 PE=3 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 9.3e-156
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 3   DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD 62
           DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD
Sbjct: 60  DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD 119

Query: 63  RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM 122
           RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM
Sbjct: 120 RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM 179

Query: 123 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 182
           QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF
Sbjct: 180 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 239

Query: 183 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 242
           YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH
Sbjct: 240 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 299

Query: 243 FPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 286
           FPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR
Sbjct: 300 FPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 342

[Close]

BLAST of CmoCh01G004150 vs. ExPASy TrEMBL
Match: A0A6J1KF32 (transmembrane protein 33 homolog OS=Cucurbita maxima OX=3661 GN=LOC111493303 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 6.0e-147
Identity = 265/283 (93.64%), Postives = 276/283 (97.53%), Query Frame = 0


Query: 3   DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD 62
           DP+LVVETMSS SSSFQPGRQSAPSPPTNDQTQSQSSGSTTRN GTSATT SNW++LRWD
Sbjct: 60  DPNLVVETMSSSSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNSGTSATTDSNWLFLRWD 119

Query: 63  RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM 122
           RHRVLFLVNAWVFLL+S A++PMVPRNISHRAYQISLMGTACSSLFTLFITCG PRSFDM
Sbjct: 120 RHRVLFLVNAWVFLLTSFAMIPMVPRNISHRAYQISLMGTACSSLFTLFITCGTPRSFDM 179

Query: 123 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 182
           QALEVYF+PVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQI+K+VRHNFPRSAF
Sbjct: 180 QALEVYFQPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQIAKFVRHNFPRSAF 239

Query: 183 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 242
           YRKCLERPCAW ESNT TLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH
Sbjct: 240 YRKCLERPCAWAESNTTTLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 299

Query: 243 FPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 286
           FP+TAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWW+R
Sbjct: 300 FPMTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWIR 342

[Close]

BLAST of CmoCh01G004150 vs. ExPASy TrEMBL
Match: A0A6J1CQJ0 (uncharacterized protein LOC111013250 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013250 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 5.3e-111
Identity = 206/283 (72.79%), Postives = 238/283 (84.10%), Query Frame = 0


Query: 3   DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD 62
           DPDLVV+T+S  S   Q  RQSAPSPPTNDQTQ+QSSGSTT N GTS TT SN       
Sbjct: 60  DPDLVVQTVSFSSLPSQSARQSAPSPPTNDQTQAQSSGSTTGNSGTSTTTDSNPTSQHLC 119

Query: 63  RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM 122
            H +LF +NAWV +++  A++PMVP+N+SHRA+++S MGT  SSLF+L I+CG P++ DM
Sbjct: 120 LHMILFSINAWVLIVALFAMLPMVPKNLSHRAFRLSFMGTTFSSLFSLLISCGAPKALDM 179

Query: 123 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 182
           QALEVYF+ VVATKA VY IY +TFVASNL LK ALIPIIC  +EQI+K++R +FPRS F
Sbjct: 180 QALEVYFQSVVATKAFVYFIYCLTFVASNLCLKFALIPIICGTIEQIAKFLRRSFPRSLF 239

Query: 183 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 242
           YRKCLERPCAWVESNT TL LLSSNVEIALGFLLIISLF+WQRNFV TFMYWQLL+LMYH
Sbjct: 240 YRKCLERPCAWVESNTTTLSLLSSNVEIALGFLLIISLFSWQRNFVLTFMYWQLLRLMYH 299

Query: 243 FPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 286
           FP+TAGYHQS WAK+GRKVNPFVSRFLPFLKP LSAA+RWW+R
Sbjct: 300 FPMTAGYHQSGWAKVGRKVNPFVSRFLPFLKPSLSAAERWWIR 342

[Close]

BLAST of CmoCh01G004150 vs. ExPASy TrEMBL
Match: A0A6J1CQK8 (uncharacterized protein LOC111013250 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013250 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 5.3e-111
Identity = 206/283 (72.79%), Postives = 238/283 (84.10%), Query Frame = 0


Query: 3   DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD 62
           DPDLVV+T+S  S   Q  RQSAPSPPTNDQTQ+QSSGSTT N GTS TT SN       
Sbjct: 60  DPDLVVQTVSFSSLPSQSARQSAPSPPTNDQTQAQSSGSTTGNSGTSTTTDSNPTSQHLC 119

Query: 63  RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM 122
            H +LF +NAWV +++  A++PMVP+N+SHRA+++S MGT  SSLF+L I+CG P++ DM
Sbjct: 120 LHMILFSINAWVLIVALFAMLPMVPKNLSHRAFRLSFMGTTFSSLFSLLISCGAPKALDM 179

Query: 123 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 182
           QALEVYF+ VVATKA VY IY +TFVASNL LK ALIPIIC  +EQI+K++R +FPRS F
Sbjct: 180 QALEVYFQSVVATKAFVYFIYCLTFVASNLCLKFALIPIICGTIEQIAKFLRRSFPRSLF 239

Query: 183 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 242
           YRKCLERPCAWVESNT TL LLSSNVEIALGFLLIISLF+WQRNFV TFMYWQLL+LMYH
Sbjct: 240 YRKCLERPCAWVESNTTTLSLLSSNVEIALGFLLIISLFSWQRNFVLTFMYWQLLRLMYH 299

Query: 243 FPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 286
           FP+TAGYHQS WAK+GRKVNPFVSRFLPFLKP LSAA+RWW+R
Sbjct: 300 FPMTAGYHQSGWAKVGRKVNPFVSRFLPFLKPSLSAAERWWIR 342

[Close]

BLAST of CmoCh01G004150 vs. ExPASy TrEMBL
Match: A0A2N9J2X3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58826 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 1.0e-93
Identity = 179/287 (62.37%), Postives = 225/287 (78.40%), Query Frame = 0


Query: 3   DPDLVVETMSSGSSSFQPGRQSAP----SPPTNDQTQSQSSGSTTRNPGTSATTGSNWMY 62
           DPDLVVE MS+ SSS QP R SAP    S  +NDQ + ++SGSTTR  GTSATTG++   
Sbjct: 21  DPDLVVEAMSTNSSS-QPTRPSAPSSASSTSSNDQARPRNSGSTTRASGTSATTGASPTS 80

Query: 63  LRWDRHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPR 122
           +RWDR  + F VNAWVF+++ LA+ P+VPR++SHRAY++S MGTACSSLF+L+   G PR
Sbjct: 81  MRWDRQTIQFSVNAWVFVVAVLAIFPLVPRHLSHRAYRLSFMGTACSSLFSLYSLYGRPR 140

Query: 123 SFDMQALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFP 182
            +++QAL+VYF+ ++ATK  +Y IY +TFV SNL LK ALIPI+C A+E ++K++R NF 
Sbjct: 141 EWNLQALQVYFQSIIATKDFIYFIYCLTFVTSNLCLKFALIPILCRALELVAKFLRRNFS 200

Query: 183 RSAFYRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLK 242
           RS+ YRK LE PC WV+SNT TL +LSS+ EI LGFLLI+SLF+WQRN +QTFMYWQLLK
Sbjct: 201 RSSLYRKYLEEPCVWVDSNTTTLSILSSHAEIGLGFLLILSLFSWQRNIIQTFMYWQLLK 260

Query: 243 LMYHFPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 286
           LMY  P+TAGYH S WAKIGR VNP V R+ PFL+  +SAAQRWW R
Sbjct: 261 LMYQAPVTAGYHNSVWAKIGRTVNPLVHRYAPFLQTPISAAQRWWFR 306

[Close]

BLAST of CmoCh01G004150 vs. NCBI nr
Match: XP_022949013.1 (uncharacterized protein LOC111452483 [Cucurbita moschata])

HSP 1 Score: 559.3 bits (1440), Expect = 1.9e-155
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 3   DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD 62
           DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD
Sbjct: 60  DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD 119

Query: 63  RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM 122
           RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM
Sbjct: 120 RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM 179

Query: 123 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 182
           QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF
Sbjct: 180 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 239

Query: 183 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 242
           YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH
Sbjct: 240 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 299

Query: 243 FPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 286
           FPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR
Sbjct: 300 FPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 342

[Close]

BLAST of CmoCh01G004150 vs. NCBI nr
Match: KAG6607043.1 (hypothetical protein SDJN03_00385, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 549.3 bits (1414), Expect = 2.0e-152
Identity = 278/283 (98.23%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 3   DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD 62
           DPDLVVETMSSGSSSFQPGRQSAPSPPT DQTQSQS GSTTRNPGTSATTGSNWMYLRWD
Sbjct: 60  DPDLVVETMSSGSSSFQPGRQSAPSPPTYDQTQSQSFGSTTRNPGTSATTGSNWMYLRWD 119

Query: 63  RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM 122
           RHRVLFLVNAWVFLLSSLAV+PMVPRNISHRAYQISLMGTACSSLFTLFITCG PRSFDM
Sbjct: 120 RHRVLFLVNAWVFLLSSLAVIPMVPRNISHRAYQISLMGTACSSLFTLFITCGTPRSFDM 179

Query: 123 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 182
           QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF
Sbjct: 180 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 239

Query: 183 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 242
           YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH
Sbjct: 240 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 299

Query: 243 FPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 286
           FPLTAGYHQSAWAKIGRKVNPFV+RFLPFLKPLLSAAQRWWLR
Sbjct: 300 FPLTAGYHQSAWAKIGRKVNPFVNRFLPFLKPLLSAAQRWWLR 342

[Close]

BLAST of CmoCh01G004150 vs. NCBI nr
Match: XP_023525188.1 (uncharacterized protein LOC111788863 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 546.2 bits (1406), Expect = 1.7e-151
Identity = 276/283 (97.53%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 3   DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD 62
           DPDLVVETMSSGSSSFQPGRQSA SPPTNDQTQSQSSGSTTRN GTSATTGSNWMYLRWD
Sbjct: 60  DPDLVVETMSSGSSSFQPGRQSAASPPTNDQTQSQSSGSTTRNSGTSATTGSNWMYLRWD 119

Query: 63  RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM 122
           RHRVLFLVNAWVFLLSSLAV+PMVPRNISHRAYQISLMGTACSSLFTLFITCG PRSFDM
Sbjct: 120 RHRVLFLVNAWVFLLSSLAVIPMVPRNISHRAYQISLMGTACSSLFTLFITCGTPRSFDM 179

Query: 123 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 182
           QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQI+KYV+HNFPRSAF
Sbjct: 180 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQIAKYVQHNFPRSAF 239

Query: 183 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 242
           YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH
Sbjct: 240 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 299

Query: 243 FPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 286
           FP+TAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR
Sbjct: 300 FPMTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 342

[Close]

BLAST of CmoCh01G004150 vs. NCBI nr
Match: KAG7036743.1 (hypothetical protein SDJN02_00363 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 533.9 bits (1374), Expect = 8.6e-148
Identity = 278/312 (89.10%), Postives = 280/312 (89.74%), Query Frame = 0


Query: 3   DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD 62
           DPDLVVETMSSGSSSFQPGRQSAPSPPT DQTQSQSSGSTTRNPGTSATTGSNWMYLRWD
Sbjct: 60  DPDLVVETMSSGSSSFQPGRQSAPSPPTYDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD 119

Query: 63  RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM 122
           RHRVLFLVNAWVFLLSSLAV+PMVPR ISHRAYQISLMGTACSSLFTLFITCG PRSFDM
Sbjct: 120 RHRVLFLVNAWVFLLSSLAVIPMVPRTISHRAYQISLMGTACSSLFTLFITCGTPRSFDM 179

Query: 123 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 182
           QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF
Sbjct: 180 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 239

Query: 183 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFT-------------------- 242
           YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFT                    
Sbjct: 240 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTSVPRRRLFRFPSLTIISFCK 299

Query: 243 ---------WQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVSRFLPFLK 286
                    WQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFV+RFLPFLK
Sbjct: 300 SIASVSLCRWQRNFVQTFMYWQLLKLMYHFPLTAGYHQSAWAKIGRKVNPFVNRFLPFLK 359

[Close]

BLAST of CmoCh01G004150 vs. NCBI nr
Match: XP_022998724.1 (transmembrane protein 33 homolog [Cucurbita maxima])

HSP 1 Score: 530.0 bits (1364), Expect = 1.2e-146
Identity = 265/283 (93.64%), Postives = 276/283 (97.53%), Query Frame = 0


Query: 3   DPDLVVETMSSGSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNPGTSATTGSNWMYLRWD 62
           DP+LVVETMSS SSSFQPGRQSAPSPPTNDQTQSQSSGSTTRN GTSATT SNW++LRWD
Sbjct: 60  DPNLVVETMSSSSSSFQPGRQSAPSPPTNDQTQSQSSGSTTRNSGTSATTDSNWLFLRWD 119

Query: 63  RHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGIPRSFDM 122
           RHRVLFLVNAWVFLL+S A++PMVPRNISHRAYQISLMGTACSSLFTLFITCG PRSFDM
Sbjct: 120 RHRVLFLVNAWVFLLTSFAMIPMVPRNISHRAYQISLMGTACSSLFTLFITCGTPRSFDM 179

Query: 123 QALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHNFPRSAF 182
           QALEVYF+PVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQI+K+VRHNFPRSAF
Sbjct: 180 QALEVYFQPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQIAKFVRHNFPRSAF 239

Query: 183 YRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 242
           YRKCLERPCAW ESNT TLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH
Sbjct: 240 YRKCLERPCAWAESNTTTLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQLLKLMYH 299

Query: 243 FPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 286
           FP+TAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWW+R
Sbjct: 300 FPMTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWIR 342

[Close]

BLAST of CmoCh01G004150 vs. TAIR 10
Match: AT3G02420.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0121 (InterPro:IPR005344); Has 72 Blast hits to 71 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 60; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 332.0 bits (850), Expect = 4.6e-91
Identity = 167/289 (57.79%), Postives = 216/289 (74.74%), Query Frame = 0


Query: 3   DPDLVVETMSSGSSSFQPGRQSAPSPPT------NDQTQSQSSGSTTRNPGTSATTGSNW 62
           DPDLVVE MS+ SSS Q  R +A S  +      N+Q +S++SGS  R  G SATTG+  
Sbjct: 60  DPDLVVEPMSTSSSSSQSARPTATSASSTASSNANEQVRSRNSGSVPRTSGPSATTGATP 119

Query: 63  MYLRWDRHRVLFLVNAWVFLLSSLAVMPMVPRNISHRAYQISLMGTACSSLFTLFITCGI 122
             +RWD   + F VNAWVF+++ LAV+P++P+N+S+RAY++S MGTACSSL++L+   G 
Sbjct: 120 SSMRWDEQTIQFSVNAWVFVIAVLAVLPLIPKNLSNRAYRLSFMGTACSSLYSLYSLYGR 179

Query: 123 PRSFDMQALEVYFRPVVATKALVYLIYSITFVASNLFLKLALIPIICVAVEQISKYVRHN 182
           PR+++MQ L+VYF+ +VA K  +Y IY +TFV S+L LK ALIPI+C A+EQ++K++R N
Sbjct: 180 PRAWNMQGLQVYFQSIVAAKDFIYFIYCLTFVTSHLCLKFALIPILCRALEQVAKFLRRN 239

Query: 183 FPRSAFYRKCLERPCAWVESNTITLCLLSSNVEIALGFLLIISLFTWQRNFVQTFMYWQL 242
           F RS  YRK LE PC WVESNT TL +LSS  EIA+GFLLIISL +WQRN +QTFMYWQL
Sbjct: 240 FGRSTIYRKYLEDPCVWVESNTTTLNILSSQAEIAIGFLLIISLLSWQRNIIQTFMYWQL 299

Query: 243 LKLMYHFPLTAGYHQSAWAKIGRKVNPFVSRFLPFLKPLLSAAQRWWLR 286
           LKLMY  P+TAGYHQS W++IGR V P + R+ PFL   +SA QRWW R
Sbjct: 300 LKLMYQAPVTAGYHQSTWSRIGRTVTPIIQRYAPFLNTPVSAVQRWWFR 348

The following BLAST results are available for this feature:

BLAST of CmoCh01G004150 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G004150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAW8	9.3e-156	100.00	uncharacterized protein LOC111452483 OS=Cucurbita moschata OX=3662 GN=LOC1114524...	[more]
A0A6J1KF32	6.0e-147	93.64	transmembrane protein 33 homolog OS=Cucurbita maxima OX=3661 GN=LOC111493303 PE=...	[more]
A0A6J1CQJ0	5.3e-111	72.79	uncharacterized protein LOC111013250 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CQK8	5.3e-111	72.79	uncharacterized protein LOC111013250 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A2N9J2X3	1.0e-93	62.37	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58826 PE=3 SV=1	[more]

BLAST of CmoCh01G004150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949013.1	1.9e-155	100.00	uncharacterized protein LOC111452483 [Cucurbita moschata]	[more]
KAG6607043.1	2.0e-152	98.23	hypothetical protein SDJN03_00385, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023525188.1	1.7e-151	97.53	uncharacterized protein LOC111788863 [Cucurbita pepo subsp. pepo]	[more]
KAG7036743.1	8.6e-148	89.10	hypothetical protein SDJN02_00363 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022998724.1	1.2e-146	93.64	transmembrane protein 33 homolog [Cucurbita maxima]	[more]

BLAST of CmoCh01G004150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02420.1	4.6e-91	57.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005344	TMEM33/Pom33 family	PFAM	PF03661	TMEM33_Pom33	coord: 66..242 e-value: 1.6E-13 score: 50.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR30603:SF18	OS01G0604700 PROTEIN	coord: 3..285
None	No IPR available	PANTHER	PTHR30603	RNA POLYMERASE SIGMA FACTOR RPO	coord: 3..285

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G004150.1	CmoCh01G004150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane