Cmc12g0326991 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0326991
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr12: 17782507 .. 17783019 (+)
RNA-Seq Expression	Cmc12g0326991
Synteny	Cmc12g0326991

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGACTCTGATTTCCAAACCGATAAGGATTTTAGAAAATCTACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTAAATACGTCGTTGCTTGTGAAGCAACAAAAGAAGCAGTTTGGCTTAGAAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGTCATAAACGAGGGAAACACATAGAGAGGAAGTATCAACTGATACGAGAGATTGTGCAACGAGGGGATGTGATTGTCACCAACATCGCTTCAGAGCACAACATTGCTGATCCATTTATGAAGACTCTCACGACTAAAGTGTTTGAGGGTCATCTAGAAAGTCTAGGTCTACGGGATATGTACATTAGGTAA

mRNA sequence

ATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGACTCTGATTTCCAAACCGATAAGGATTTTAGAAAATCTACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTAAATACGTCGTTGCTTGTGAAGCAACAAAAGAAGCAGTTTGGCTTAGAAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGTCATAAACGAGGGAAACACATAGAGAGGAAGTATCAACTGATACGAGAGATTGTGCAACGAGGGGATGTGATTGTCACCAACATCGCTTCAGAGCACAACATTGCTGATCCATTTATGAAGACTCTCACGACTAAAGTGTTTGAGGGTCATCTAGAAAGTCTAGGTCTACGGGATATGTACATTAGGTAA

Coding sequence (CDS)

ATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGACTCTGATTTCCAAACCGATAAGGATTTTAGAAAATCTACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTAAATACGTCGTTGCTTGTGAAGCAACAAAAGAAGCAGTTTGGCTTAGAAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGTCATAAACGAGGGAAACACATAGAGAGGAAGTATCAACTGATACGAGAGATTGTGCAACGAGGGGATGTGATTGTCACCAACATCGCTTCAGAGCACAACATTGCTGATCCATTTATGAAGACTCTCACGACTAAAGTGTTTGAGGGTCATCTAGAAAGTCTAGGTCTACGGGATATGTACATTAGGTAA

Protein sequence

MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKYVVACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQLIREIVQRGDVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGLRDMYIR

Homology

[Close]

BLAST of Cmc12g0326991 vs. NCBI nr
Match: KAA0043328.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 344.7 bits (883), Expect = 4.4e-91
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60
           MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY
Sbjct: 1   MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60

Query: 61  VVACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120
           V+ACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ
Sbjct: 61  VIACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120

Query: 121 LIREIVQRGDVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGLRDMYIR 171
           LIREIVQRGDVIVTNIASEHNI DPFMKTLTTKVFEGHLESLGLRDMYIR
Sbjct: 121 LIREIVQRGDVIVTNIASEHNIVDPFMKTLTTKVFEGHLESLGLRDMYIR 170

[Close]

BLAST of Cmc12g0326991 vs. NCBI nr
Match: TYK17670.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 344.7 bits (883), Expect = 4.4e-91
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60
           MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY
Sbjct: 1   MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60

Query: 61  VVACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120
           V+ACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ
Sbjct: 61  VIACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120

Query: 121 LIREIVQRGDVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGLRDMYIR 171
           LIREIVQRGDVIVTNIASEHNI DPFMKTLTTKVFEGHLESLGLRDMYIR
Sbjct: 121 LIREIVQRGDVIVTNIASEHNIVDPFMKTLTTKVFEGHLESLGLRDMYIR 170

[Close]

BLAST of Cmc12g0326991 vs. NCBI nr
Match: KAA0042496.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86
Identity = 162/170 (95.29%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60
           MLVYGAKDLILTGYTDSDFQTDKD RKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEA+Y
Sbjct: 131 MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 190

Query: 61  VVACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120
           V ACEA KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 
Sbjct: 191 VAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYH 250

Query: 121 LIREIVQRGDVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGLRDMYIR 171
           LIREIVQRGDVIVT IASEHNIADPF KTLT KVFEGHLESLGLRDMYIR
Sbjct: 251 LIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300

[Close]

BLAST of Cmc12g0326991 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86
Identity = 162/170 (95.29%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1    MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60
            MLVYGAKDLILTGYTDSDFQTDKD RKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEA+Y
Sbjct: 1066 MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 1125

Query: 61   VVACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120
            V ACEA KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 
Sbjct: 1126 VAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYH 1185

Query: 121  LIREIVQRGDVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGLRDMYIR 171
            LIREIVQRGDVIVT IASEHNIADPF KTLT KVFEGHLESLGLRDMYIR
Sbjct: 1186 LIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc12g0326991 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86
Identity = 162/170 (95.29%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1    MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60
            MLVYGAKDLILTGYTDSDFQTDKD RKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEA+Y
Sbjct: 940  MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 999

Query: 61   VVACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120
            V ACEA KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 
Sbjct: 1000 VAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYH 1059

Query: 121  LIREIVQRGDVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGLRDMYIR 171
            LIREIVQRGDVIVT IASEHNIADPF KTLT KVFEGHLESLGLRDMYIR
Sbjct: 1060 LIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1109

[Close]

BLAST of Cmc12g0326991 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.7e-27
Identity = 66/163 (40.49%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 2    LVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKYV 61
            L +G  D IL GYTD+D   D D RKS++G +FT +GGA+ W+S  Q C+A ST EA+Y+
Sbjct: 1166 LCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYI 1225

Query: 62   VACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQL 121
             A E  KE +WL++FL +L +         +YCD+  A+  SK    H R KHI+ +Y  
Sbjct: 1226 AATETGKEMIWLKRFLQELGL---HQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHW 1285

Query: 122  IREIVQRGDVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGL 165
            IRE+V    + V  I++  N AD   K +    FE   E +G+
Sbjct: 1286 IREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325

[Close]

BLAST of Cmc12g0326991 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 100.5 bits (249), Expect = 1.9e-20
Identity = 55/155 (35.48%), Postives = 86/155 (55.48%), Query Frame = 0


Query: 11   LTGYTDSDFQTDKDFRKSTSGSVFTL-NGGAVVWRSIKQGCIADSTMEAKYVVACEATKE 70
            + GY DSD+   +  RKST+G +F + +   + W + +Q  +A S+ EA+Y+   EA +E
Sbjct: 1248 IIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVRE 1307

Query: 71   AVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQLIREIVQRG 130
            A+WL+  L  + +   +  PI +Y DN G ++ +  P  HKR KHI+ KY   RE VQ  
Sbjct: 1308 ALWLKFLLTSINI--KLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNN 1367

Query: 131  DVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGL 165
             + +  I +E+ +AD F K L    F    + LGL
Sbjct: 1368 VICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of Cmc12g0326991 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-11
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 11  LTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKYVVACEATKEA 70
           L GY+D+D+  D + R+STSG +F LNGG V WRS KQ  +A S+ E +Y+   EAT+EA
Sbjct: 71  LVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSEATQEA 130

Query: 71  VWL 74
           VWL
Sbjct: 131 VWL 133

[Close]

BLAST of Cmc12g0326991 vs. ExPASy TrEMBL
Match: A0A5D3D214 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14220G00010 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.1e-91
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60
           MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY
Sbjct: 1   MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60

Query: 61  VVACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120
           V+ACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ
Sbjct: 61  VIACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120

Query: 121 LIREIVQRGDVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGLRDMYIR 171
           LIREIVQRGDVIVTNIASEHNI DPFMKTLTTKVFEGHLESLGLRDMYIR
Sbjct: 121 LIREIVQRGDVIVTNIASEHNIVDPFMKTLTTKVFEGHLESLGLRDMYIR 170

[Close]

BLAST of Cmc12g0326991 vs. ExPASy TrEMBL
Match: A0A5A7TKJ4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G002390 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.1e-91
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60
           MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY
Sbjct: 1   MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60

Query: 61  VVACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120
           V+ACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ
Sbjct: 61  VIACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120

Query: 121 LIREIVQRGDVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGLRDMYIR 171
           LIREIVQRGDVIVTNIASEHNI DPFMKTLTTKVFEGHLESLGLRDMYIR
Sbjct: 121 LIREIVQRGDVIVTNIASEHNIVDPFMKTLTTKVFEGHLESLGLRDMYIR 170

[Close]

BLAST of Cmc12g0326991 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 5.5e-87
Identity = 162/170 (95.29%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1    MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60
            MLVYGAKDLILTGYTDSDFQTDKD RKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEA+Y
Sbjct: 1066 MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 1125

Query: 61   VVACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120
            V ACEA KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 
Sbjct: 1126 VAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYH 1185

Query: 121  LIREIVQRGDVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGLRDMYIR 171
            LIREIVQRGDVIVT IASEHNIADPF KTLT KVFEGHLESLGLRDMYIR
Sbjct: 1186 LIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc12g0326991 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 5.5e-87
Identity = 162/170 (95.29%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1    MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60
            MLVYGAKDLILTGYTDSDFQTDKD RKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEA+Y
Sbjct: 940  MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 999

Query: 61   VVACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120
            V ACEA KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 
Sbjct: 1000 VAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYH 1059

Query: 121  LIREIVQRGDVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGLRDMYIR 171
            LIREIVQRGDVIVT IASEHNIADPF KTLT KVFEGHLESLGLRDMYIR
Sbjct: 1060 LIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1109

[Close]

BLAST of Cmc12g0326991 vs. ExPASy TrEMBL
Match: A0A5A7TKM4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00470 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 5.5e-87
Identity = 162/170 (95.29%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MLVYGAKDLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKY 60
           MLVYGAKDLILTGYTDSDFQTDKD RKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEA+Y
Sbjct: 131 MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 190

Query: 61  VVACEATKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQ 120
           V ACEA KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKY 
Sbjct: 191 VAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYH 250

Query: 121 LIREIVQRGDVIVTNIASEHNIADPFMKTLTTKVFEGHLESLGLRDMYIR 171
           LIREIVQRGDVIVT IASEHNIADPF KTLT KVFEGHLESLGLRDMYIR
Sbjct: 251 LIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300

[Close]

BLAST of Cmc12g0326991 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-14
Identity = 40/117 (34.19%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 8   DLILTGYTDSDFQTDKDFRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAKYVVACEAT 67
           ++ L  ++D+ FQ+ KD R+ST+G    L    + W+S KQ  ++ S+ EA+Y     AT
Sbjct: 439 EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFAT 498

Query: 68  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYQLIRE 125
            E +WL +F  +L++   ++ P  L+CDN+ A+  +     H+R KHIE     +RE
Sbjct: 499 DEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

The following BLAST results are available for this feature:

BLAST of Cmc12g0326991 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043328.1	4.4e-91	98.82	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK17670.1	4.4e-91	98.82	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0042496.1	1.1e-86	95.29	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0025945.1	1.1e-86	95.29	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	1.1e-86	95.29	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc12g0326991 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.7e-27	40.49	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.9e-20	35.48	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P0CV72	2.1e-11	53.97	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc12g0326991 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D214	2.1e-91	98.82	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14220G00...	[more]
A0A5A7TKJ4	2.1e-91	98.82	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G0023...	[more]
A0A5A7TZD0	5.5e-87	95.29	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	5.5e-87	95.29	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7TKM4	5.5e-87	95.29	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G0047...	[more]

BLAST of Cmc12g0326991 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.1e-14	34.19	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF273	RIBOSOME BIOGENESIS PROTEIN BOP1 HOMOLOG	coord: 35..127
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 35..127
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 12..153 e-value: 2.5321E-65 score: 194.609

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0326991.1	Cmc12g0326991.1	mRNA