Cmc12g0319471 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0319471
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr12: 5044455 .. 5050734 (+)
RNA-Seq Expression	Cmc12g0319471
Synteny	Cmc12g0319471

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACTAAAGCTTGGGATTACACAAAACAAGTCATACAAGGACGATGGTTTTCGGTATTCGCCGGTTTGATAATGATGGTTGGCAATGGCTCTACTTACATCTATGGAACATATTCAAAAGTAATCAAGACTGAATTCAATTACAGTCAAACCCAACTTAGCATATTAGGATTTGCAAAAGATCTCGGTTCCAACGTTGGAATTTTTGCCGGTCTTCTCGCCGAAGTCGCTCCGCCGTGGGTTCTCTTCTTAATTGGTTCTGTTCAAAACTTCACTGGCTTCTTCTTGATATGGCTCTCTATCACACACCGTATCCCACAACCAAAATTTTGGCAAATGTTTCTTTGTGTTTGCTTAGGTACTCATTCTTCTAATTTTGCCAATACAGCCATTATGGTCACTAGTGTTGTAAATTTCCCTGACCGTCGTGGTATCATTTGTTAAGAAAGTGCTTTATGATTGAAACATGCTCATGTGTGTTTATCTTTGTTAAGTTAATTTAGTCCAAGTTTGTTCCTATTTCTTAGGAATTAGTCATTCATGATTTGATTAGTGGAGAAAGTTTAGGGTCATGATGTTAGTGGAGAAAGTTTAGGGTCATGATGTTAGTGGGTAGTTATTTTTAAGACTTTAAATACTGTATTTTTCTTTGAATGTAATTGAAATGAATTTGTCTTCAATTTTCCATTGCAATATTTATTTTTACTCTAGAAAATAACAATTGGTATCAGAGCTCTCTTCTTAAGGGATCTGTGAGTGTGAGTTGTTGTGTCATGGACGCCATAACAAGTTCTAGTTTCACTTCAATTTCTCCATTGATATTTGATGGAGACAACTACCAAGTTTGGGCAGTTCGTATGGAAGCTTATATGGAAGCTTTGGATATTTGGGAAGCAGTGGAAGAGGATTATGAAATTCCTGCTCTTCCAGACAATCCTACCATGGCACAAATCAAAGCGCAAAAGGAGAAGAAGACAAAGAAATCCAAGGCAAAGGCATGTCTGTTTGCTGCAGTCTCATCTACTATCTTCACTAGAATTATGACTCTGAGATCAGCATATGAGATATGGAATTATCTCAAGTCAGAATATGAGGGAGATGAAAGAATCAAAGGAATGCGTGTGCTAAACTTGATTCGAGAATTCGAGTTGCAGAAGATGAAGGAAACAGAATCAATTAAAGAGTATTCTGTTAGGTTATTGGACATTGCAAACCAAATCAGATTACTTGGTTCTGTGTTCAAGGACTCAAGAATTGTAGAAAAAATTCTTGTATCAGTGCCTGAAAAATTTGAGGCATCTATTTCTGCCTTAGAAAATACCAAAGATTTGACTCAAATCACTCTTGCAGAGATACTCAATGCTTTGCAAGCGCAGGAACAAAGAAGAGCCATGAGGCAAGAAGGTGCTGTTGAAGGAGCCTTGCCAGCGAAGCATCATGAGAACGTTAGGAACAATAAGAAGAAGAAGTTTTTCAAGAAGAATCAAATTTCTACTAGAGAATCTTCAACTTACAACAAAGCAGGAGTCAAGAAGGGATCCTATCCTCCCTGTTCACATTGCAATAAACAGGGTCATCCTCCTTTTAAATGCTGGAGGAGACCAAACGCCAAGTGCACCAAATGTAACCAAATGGGGCATGAAGCTGTAATTTGCAGGAACAATAATCAACAACAAGGTGTAGAGGCCAAAATTGCTTATCAGGAGGAGGAGGAGGAGGATCAATTGTTTGTGGCAACATGCTTCGTGGGTGGTGAGTCAAATGAAAGCTGGCTGATTGACAGTGGATGTACCAACCATATGACTCATGACAAGGAGTTGTTTAAAGATCTGAAGCCAACAAATATCACCAAAGTCAGAATTGGCAATGGAGACTACATCTCAGTCAAAGGAAAGGGGACTATTGCGATTGCCAGTTGTAAAGTACAAAGCATATACAAGATGTTCTTTTTGTACCTGACATTAACCAAAATTTGTTGAGTGTGGGTCAACTTATTGAAAAAGGTTTTAAAGTTACTTTTGAAAATGAATATTGCTTGATTAAGGATGCAGCAAATCAAGATATTTTCAAAGTAAAAATGAAAGGAAAAAGTTTTTCACTTAATCCTTTAGAGGAGAAGCAATCTGTTTTTGCTCTCAAAGAAGATGAAACACAGCTTTGGCACAAAAGAGTCGGTCACTATCATCATCAAGGGCTGCTACAACTAACGGAGTTGGCACTTGATTTTCCCAAGCTTAGTGAAGAAATCTCAAGCTGCAAAGCGTGTCATTTTGGAAAGCAAAATAGGAAGTCATTTCCCAAGTCATCTTGGAGAGCCACTCAAAAATTGCAGCTCATTCACACAGATGTTGCAGGTCCTCAGAGAACACCTTCTTTAAAAGGTAGTCTCTATTATATTGCTTTTATTGATGACTTCACCAGAATGTGCTGGATTTTTTTCTTGAAGTTTAAATCAGAGGTTGCTCATGTCTTTTGGAAGTTCAAGGCAAGAGTTGAAAATGAAAGTGGTTGCAAAATTCAAATGGTAAGGTCTGACAATGGGAAGGAGTATGTTTCGGCAGAATTTGACAAGTTTTGTGAAGATTCAGGCATAAAACATCAACTTACAGCTCCTTACACTCCTCAACAAAATGGAGTTAGTGAGAGGAGAAATAGATACATCATGGAGATGACAAGATGCATGCTGCATGAAAAGAGTTTGCCAAAGAAGTTTTGGGCAGAGGCAGCAAATACAGCTGTATTTCTTCAAAATAGGCTTCCCACAAAAGCATTGAAGGAAAAGACACCATTTGAGGCATGGTATGGGTACAAACCATCATTGAAATTTCTCAAAGTATTTGGTTGTTTGTGTTTCACTCATGTTCCACAGAGCAAGCGTGACAAACTTGATAGGAGAGCTTCACCGGGTGTCTTTATAGGCTATAGTTCTATCAGCAAAGCCTATAAAATTTTCCAACCACAAACTGGAAAGATTGTCGTGAGCAGGGATGTTCACTTCGAGGAAGATGAAGAGTGGAACTTTGATGATGCAGAGAAGAAAGGTCAGACCTTGGAAAAGATGAAATTCAAGTTTTTTGATTCAAGCATTGAAGAGGAAGATGACAGGCAGAATGAAATAGTAGATGATGCTTCCGTGAGAGGAACAAGGTTGCTTTCTGATATTTATGAAAGGTGCAATGTTGCTGTGTGTGAACCTGCAAACTATGCAGAAGCAAAGAAAGATCAAAGGTGGATAGCTGCAATGGAGGAGGAGTTGTCAATGATAGAGAAGAACAAAACTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTGGAGTTAAATGGGTGTTTAGAACCAAGCTTAATGCTGATGGCTCGATTAACAAGCACAAAGCCAGGCTTGTGGTTAAAGGGTATGCTCAAATCTTTGGTGTTGATTACTCTGATACTTTTGCTCCTGTTGCTAGAATGGACACAATCAGGTTACTATTTGCAATAGCTGCACAAAAGGGGTGGAAATTGTATCAGTTGGATGTCAAATCAGCTTTTTTGAATGGTGTCTTACAAGAAGAAATTTATGTTGAGCAGCCCGAAGGATGTGAGAAGCAAGGTGAAAGAAATAAAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTACTGAGCTTGGGATTTTTGAAAAGTCTATCAGAATCAACCTTATATGTTAAGCACAATGGTACTAACATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTACAGGAAACAATGCAGATCATATTCAAAATTTCAAATGGGAGATGATGAAGATGTTTGAAATGACAGATCTCGGGCTCATGTCCTACTTTCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTCATTTGCCAGAAAAAATATGCAAAGGAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCTGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAAGATGGTGCTGACAAAGTTGATGAAGGATATTTTAGGAGTTTAATTGGTTGCTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGCTGTGAGTATTTTGTCTCGTTTCATGCATTGTGCAAGTGAATTACATCTTAAGGCAGCAAAAAGAGTGATACGATATGTCAAAGGCACAAGTGATTTTGGTGTTAAGTTCACTAGGGGCAAGGAGTTCAAACTGATTGGTTTTTCTGATAGTGATTGGGGAGGTTCCATTGATGATATGAGAAGCACTTTAGGTTACTGTTTTACTCTTAGCTCTGGTGTTTTCTCTTGGAGCTCGAAAAAGCAAGAGATTGTAGCCCAATCCACTGCTGAAGCAGAATTTATTGCTGCAACAGCTACTGCCAATCAAGCTTTATGGCTGAGGAAAATTTTACTTGACCTTGATCTGGAGCAGAAGAAAAGCACGGAGATTCTTGTTGATAACAAAGCGGCTATTGCTATTTCTCATAATCCTGTGTTTTATAAGAAGACTAAACATTTTAACATCAAGTTATTTTTTTTTAAGGGAAGTGCAGAAAAGTGGAGAGGTGATTCTTGTCTACTGCAAAACAGAAGATCAAGTTGCAGACATATTAACTAAACCGTTGCCTACTTGCAAGTTCGAGTTTCTAAGGTCAAAACTTGGTGTTTGCAACTCCTAAAGCAAGGAGGAGTGTTAAGAAAGTGCTTTATGATTGAAACATGCTCATGTGTGTTTATCTTTGTTAAGTTAATTTAGTCCAAGTTTGTTCCTATTTCTTAGGAATTAGTCATTCATGATTTGATTAGTGGAGAAAGTTTAGGGTCATGATGTTAGTGGAGAAAGTTTAGGGTCATGATGTTAGTGGGTAGTTATTTTTAAGACTTTAAATACTGTATTTTTCTTTGAATGTAATTGAAATGAATTTGTCTTCAATTTTCCATTGCAATATTTATTTTTACTCTAGAAAATAACATCATTTTAGGCTTACTCAATGGGTATGTTGGTATTGGAGGTGCCATTTTAACCCAAATCTATTTAGGTATTTACGGCCCTAAAGATCCATCAAATCTTGTTCTTCTTTTTGCTTGGCTTCCCTCTGCGGTAATCCTCGTTCTTTCTTTCTCTATTCGACCAATCTGTATTCATAAACATCCTGAAGAACTCAAAGTGTTTTACCACTTGCTTTATGTCTCTGTTATTCTAGCTATGTTCATTCTCTTTTTAACCATTGCACAAAAAGAAGTAGCTTTCACTCGACGTGGATATACGAATGGTGCGGCCGTCATCGTTGTGTTACTATTCCTACCTCTTGTGATTGTATGTAGAGAAGAACACGTATTGTACAAACTCAACAAACAAAACGAGGATTCTTCCTTTAATATCTCGATTAATGATCATCAAAAGCCTCATAGCTCAATCACCACAGAAAAAACAGAGAACTCGCGGTCGTATTTCTCAAAAATATGGAACAAACCCGAAAGAGGAGAAGATTTCAGCATCTTGCAAGCTATTTTCAGTATAGATATGACTCTTATCTTTTTAGCTACTTTTTCTGGATCTGGTTCTGCTCTTACAGCCATTGATAATTTAGGCCAAGTCGCTGAATCACTTGCCTACCCGTCAGAAGCTATAAGCATCATCGTTTCTTGGGTTTCCGTATTCAATTTCTTCGGTCGAATCTTCTCCGGTTTCATCTCCGAAAACTTCATGATCAAATACAAATTACCTCGTCCTCTAACGTTTGCTGTCGCCTTCTTCATCACTGGCATTGGCCAGCTTATTGTTGCGTATCCATCATCAGGTTCAGTCTTCATTGCTTCAATCGTAATCGGGTTCGGATTTGGAATGCAAGTGCCATTGCTATTCACCATAATCTCAGAGCTATTTGGGCTAAAACATTACTCAACATTGTTCAATTGTGGGCAACTGGTAGTCCCAATTGGGTCTTATATACTAAACGTGGATGTAGTAGGGAGAATATATGATAAAGAAGCATTAGTTGACGGTATAAAGTTGACGGGCAGGGGATTAATTTGTACCGGAGCTCATTGTTTTAATGGATCTTTCACAATTTTGTCTGGAGCGACATTGTTTGGTGCTATAGTTATGCTTGCATTGGCTTATAGGACAAGAGAATTCTACAAAGGAGATGTATATAAGAAATATAGAGACGACGTGTGGATTACTCCAACTGATATGGAGTTCTATCACTTAGATAAGAAGAAAATTCGTGATTAA

mRNA sequence

ATGGGAACTAAAGCTTGGGATTACACAAAACAAGTCATACAAGGACGATGGTTTTCGGTATTCGCCGGTTTGATAATGATGGTTGGCAATGGCTCTACTTACATCTATGGAACATATTCAAAAGTAATCAAGACTGAATTCAATTACAGTCAAACCCAACTTAGCATATTAGGATTTGCAAAAGATCTCGGTTCCAACGTTGGAATTTTTGCCGGTCTTCTCGCCGAAGTCGCTCCGCCGTGGGTTCTCTTCTTAATTGGTTCTGTTCAAAACTTCACTGGCTTCTTCTTGATATGGCTCTCTATCACACACCGTATCCCACAACCAAAATTTTGGCAAATGTTTCTTTGTGTTTGCTTAGGTACTCATTCTTCTAATTTTGCCAATACAGCCATTATGGTCACTAGTGTTGTAAATTTCCCTGACCGTCGTGAAAATAACAATTGGTATCAGAGCTCTCTTCTTAAGGGATCTGTGAGTGTGAGTTGTTGTGTCATGGACGCCATAACAAGTTCTAGTTTCACTTCAATTTCTCCATTGATATTTGATGGAGACAACTACCAAGTTTGGGCAGTTCGTATGGAAGCTTATATGGAAGCTTTGGATATTTGGGAAGCAGTGGAAGAGGATTATGAAATTCCTGCTCTTCCAGACAATCCTACCATGGCACAAATCAAAGCGCAAAAGGAGAAGAAGACAAAGAAATCCAAGGCAAAGGCATGTCTGTTTGCTGCAGTCTCATCTACTATCTTCACTAGAATTATGACTCTGAGATCAGCATATGAGATATGGAATTATCTCAAGTCAGAATATGAGGGAGATGAAAGAATCAAAGGAATGCGTGTGCTAAACTTGATTCGAGAATTCGAGTTGCAGAAGATGAAGGAAACAGAATCAATTAAAGAGTATTCTGTTAGGTTATTGGACATTGCAAACCAAATCAGATTACTTGGTTCTGTGTTCAAGGACTCAAGAATTGTAGAAAAAATTCTTGTATCAGTGCCTGAAAAATTTGAGGCATCTATTTCTGCCTTAGAAAATACCAAAGATTTGACTCAAATCACTCTTGCAGAGATACTCAATGCTTTGCAAGCGCAGGAACAAAGAAGAGCCATGAGGCAAGAAGGTGCTGTTGAAGGAGCCTTGCCAGCGAAGCATCATGAGAACGTTAGGAACAATAAGAAGAAGAAGTTTTTCAAGAAGAATCAAATTTCTACTAGAGAATCTTCAACTTACAACAAAGCAGGAGTCAAGAAGGGATCCTATCCTCCCTGTTCACATTGCAATAAACAGGGTCATCCTCCTTTTAAATGCTGGAGGAGACCAAACGCCAAGTGCACCAAATGTAACCAAATGGGGCATGAAGCTGTAATTTGCAGGAACAATAATCAACAACAAGGTGTAGAGGCCAAAATTGCTTATCAGGAGGAGGAGGAGGAGGATCAATTGTTTGTGGCAACATGCTTCGTGGGTGGTGAGTCAAATGAAAGCTGGCTGATTGACAGTGGATGTACCAACCATATGACTCATGACAAGGAGTTGTTTAAAGATCTGAAGCCAACAAATATCACCAAAGTCAGAATTGGCAATGGAGACTACATCTCAGTCAAAGGAAAGGGGACTATTGCGATTGCCAGTTGTTTTAAAGTTACTTTTGAAAATGAATATTGCTTGATTAAGGATGCAGCAAATCAAGATATTTTCAAAGTAAAAATGAAAGGAAAAAGTTTTTCACTTAATCCTTTAGAGGAGAAGCAATCTGTTTTTGCTCTCAAAGAAGATGAAACACAGCTTTGGCACAAAAGAGTCGGTCACTATCATCATCAAGGGCTGCTACAACTAACGGAGTTGGCACTTGATTTTCCCAAGCTTAGTGAAGAAATCTCAAGCTGCAAAGCGTGTCATTTTGGAAAGCAAAATAGGAAGTCATTTCCCAAGTCATCTTGGAGAGCCACTCAAAAATTGCAGCTCATTCACACAGATGTTGCAGGTCCTCAGAGAACACCTTCTTTAAAAGGTAGTCTCTATTATATTGCTTTTATTGATGACTTCACCAGAATGTGCTGGATTTTTTTCTTGAAGTTTAAATCAGAGGTTGCTCATGTCTTTTGGAAGTTCAAGGCAAGAGTTGAAAATGAAAGTGGTTGCAAAATTCAAATGGTAAGGTCTGACAATGGGAAGGAGTATGTTTCGGCAGAATTTGACAAGTTTTGTGAAGATTCAGGCATAAAACATCAACTTACAGCTCCTTACACTCCTCAACAAAATGGAGTTAGTGAGAGGAGAAATAGATACATCATGGAGATGACAAGATGCATGCTGCATGAAAAGAGTTTGCCAAAGAAGTTTTGGGCAGAGGCAGCAAATACAGCTGTATTTCTTCAAAATAGGCTTCCCACAAAAGCATTGAAGGAAAAGACACCATTTGAGGCATGGTATGGGTACAAACCATCATTGAAATTTCTCAAAGTATTTGGTTGTTTGTGTTTCACTCATGTTCCACAGAGCAAGCGTGACAAACTTGATAGGAGAGCTTCACCGGGTGTCTTTATAGGCTATAGTTCTATCAGCAAAGCCTATAAAATTTTCCAACCACAAACTGGAAAGATTGTCGTGAGCAGGGATGTTCACTTCGAGGAAGATGAAGAGTGGAACTTTGATGATGCAGAGAAGAAAGGTCAGACCTTGGAAAAGATGAAATTCAAGTTTTTTGATTCAAGCATTGAAGAGGAAGATGACAGGCAGAATGAAATAGTAGATGATGCTTCCGTGAGAGGAACAAGGTTGCTTTCTGATATTTATGAAAGGTGCAATGTTGCTGTGTGTGAACCTGCAAACTATGCAGAAGCAAAGAAAGATCAAAGGTGGATAGCTGCAATGGAGGAGGAGTTGTCAATGATAGAGAAGAACAAAACTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTGGAGTTAAATGGGTGTTTAGAACCAAGCTTAATGCTGATGGCTCGATTAACAAGCACAAAGCCAGGCTTGTGGTTAAAGGGTATGCTCAAATCTTTGGTGTTGATTACTCTGATACTTTTGCTCCTGTTGCTAGAATGGACACAATCAGGTTACTATTTGCAATAGCTGCACAAAAGGGGTGGAAATTGTATCAGTTGGATGTCAAATCAGCTTTTTTGAATGGTGTCTTACAAGAAGAAATTTATGTTGAGCAGCCCGAAGGATGTGAGAAGCAAGGTGAAAGAAATAAAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTACTGAGCTTGGGATTTTTGAAAAGTCTATCAGAATCAACCTTATATGTTAAGCACAATGGTACTAACATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTACAGGAAACAATGCAGATCATATTCAAAATTTCAAATGGGAGATGATGAAGATGTTTGAAATGACAGATCTCGGGCTCATGTCCTACTTTCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTCATTTGCCAGAAAAAATATGCAAAGGAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCTGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAAGATGGTGCTGACAAAGTTGATGAAGGATATTTTAGGAGTTTAATTGGTTGCTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGCTGTGAGTATTTTGTCTCGTTTCATGCATTGTGCAAGTGAATTACATCTTAAGGCAGCAAAAAGAGTGATACGATATGTCAAAGGCACAAGTGATTTTGGTGTTAAGTTCACTAGGGGCAAGGAGTTCAAACTGATTGGTTTTTCTGATAGTGATTGGGGAGGTTCCATTGATGATATGAGAAGCACTTTAGGTTACTGTTTTACTCTTAGCTCTGGTGTTTTCTCTTGGAGCTCGAAAAAGCAAGAGATTGTAGCCCAATCCACTGCTGAAGCAGAATTTATTGCTGCAACAGCTACTGCCAATCAAGCTTTATGGCTGAGGAAAATTTTACTTGACCTTGATCTGGAGCAGAAGAAAAGCACGGAGATTCTTGTTGATAACAAAGCGGCTATTGCTATTTCTCATAATCCTGTGTTTTATAAGAAGACTAAACATTTTAACATCAAGTTATTTTTTTTTAAGGGAAGTGCAGAAAAGTGGAGAGGTGATTCTTGTCTACTGCAAAACAGAAGATCAAAAAATAACATCATTTTAGGCTTACTCAATGGGTATGTTGGTATTGGAGGTGCCATTTTAACCCAAATCTATTTAGGTATTTACGGCCCTAAAGATCCATCAAATCTTGTTCTTCTTTTTGCTTGGCTTCCCTCTGCGGTAATCCTCGTTCTTTCTTTCTCTATTCGACCAATCTGTATTCATAAACATCCTGAAGAACTCAAAGTGTTTTACCACTTGCTTTATGTCTCTGTTATTCTAGCTATGTTCATTCTCTTTTTAACCATTGCACAAAAAGAAGTAGCTTTCACTCGACGTGGATATACGAATGGTGCGGCCGTCATCGTTGTGTTACTATTCCTACCTCTTGTGATTGTATGTAGAGAAGAACACGTATTGTACAAACTCAACAAACAAAACGAGGATTCTTCCTTTAATATCTCGATTAATGATCATCAAAAGCCTCATAGCTCAATCACCACAGAAAAAACAGAGAACTCGCGGTCGTATTTCTCAAAAATATGGAACAAACCCGAAAGAGGAGAAGATTTCAGCATCTTGCAAGCTATTTTCAGTATAGATATGACTCTTATCTTTTTAGCTACTTTTTCTGGATCTGGTTCTGCTCTTACAGCCATTGATAATTTAGGCCAAGTCGCTGAATCACTTGCCTACCCGTCAGAAGCTATAAGCATCATCGTTTCTTGGGTTTCCGTATTCAATTTCTTCGGTCGAATCTTCTCCGGTTTCATCTCCGAAAACTTCATGATCAAATACAAATTACCTCGTCCTCTAACGTTTGCTGTCGCCTTCTTCATCACTGGCATTGGCCAGCTTATTGTTGCGTATCCATCATCAGGTTCAGTCTTCATTGCTTCAATCGTAATCGGGTTCGGATTTGGAATGCAAGTGCCATTGCTATTCACCATAATCTCAGAGCTATTTGGGCTAAAACATTACTCAACATTGTTCAATTGTGGGCAACTGGTAGTCCCAATTGGGTCTTATATACTAAACGTGGATGTAGTAGGGAGAATATATGATAAAGAAGCATTAGTTGACGGTATAAAGTTGACGGGCAGGGGATTAATTTGTACCGGAGCTCATTGTTTTAATGGATCTTTCACAATTTTGTCTGGAGCGACATTGTTTGGTGCTATAGTTATGCTTGCATTGGCTTATAGGACAAGAGAATTCTACAAAGGAGATGTATATAAGAAATATAGAGACGACGTGTGGATTACTCCAACTGATATGGAGTTCTATCACTTAGATAAGAAGAAAATTCGTGATTAA

Coding sequence (CDS)

ATGGGAACTAAAGCTTGGGATTACACAAAACAAGTCATACAAGGACGATGGTTTTCGGTATTCGCCGGTTTGATAATGATGGTTGGCAATGGCTCTACTTACATCTATGGAACATATTCAAAAGTAATCAAGACTGAATTCAATTACAGTCAAACCCAACTTAGCATATTAGGATTTGCAAAAGATCTCGGTTCCAACGTTGGAATTTTTGCCGGTCTTCTCGCCGAAGTCGCTCCGCCGTGGGTTCTCTTCTTAATTGGTTCTGTTCAAAACTTCACTGGCTTCTTCTTGATATGGCTCTCTATCACACACCGTATCCCACAACCAAAATTTTGGCAAATGTTTCTTTGTGTTTGCTTAGGTACTCATTCTTCTAATTTTGCCAATACAGCCATTATGGTCACTAGTGTTGTAAATTTCCCTGACCGTCGTGAAAATAACAATTGGTATCAGAGCTCTCTTCTTAAGGGATCTGTGAGTGTGAGTTGTTGTGTCATGGACGCCATAACAAGTTCTAGTTTCACTTCAATTTCTCCATTGATATTTGATGGAGACAACTACCAAGTTTGGGCAGTTCGTATGGAAGCTTATATGGAAGCTTTGGATATTTGGGAAGCAGTGGAAGAGGATTATGAAATTCCTGCTCTTCCAGACAATCCTACCATGGCACAAATCAAAGCGCAAAAGGAGAAGAAGACAAAGAAATCCAAGGCAAAGGCATGTCTGTTTGCTGCAGTCTCATCTACTATCTTCACTAGAATTATGACTCTGAGATCAGCATATGAGATATGGAATTATCTCAAGTCAGAATATGAGGGAGATGAAAGAATCAAAGGAATGCGTGTGCTAAACTTGATTCGAGAATTCGAGTTGCAGAAGATGAAGGAAACAGAATCAATTAAAGAGTATTCTGTTAGGTTATTGGACATTGCAAACCAAATCAGATTACTTGGTTCTGTGTTCAAGGACTCAAGAATTGTAGAAAAAATTCTTGTATCAGTGCCTGAAAAATTTGAGGCATCTATTTCTGCCTTAGAAAATACCAAAGATTTGACTCAAATCACTCTTGCAGAGATACTCAATGCTTTGCAAGCGCAGGAACAAAGAAGAGCCATGAGGCAAGAAGGTGCTGTTGAAGGAGCCTTGCCAGCGAAGCATCATGAGAACGTTAGGAACAATAAGAAGAAGAAGTTTTTCAAGAAGAATCAAATTTCTACTAGAGAATCTTCAACTTACAACAAAGCAGGAGTCAAGAAGGGATCCTATCCTCCCTGTTCACATTGCAATAAACAGGGTCATCCTCCTTTTAAATGCTGGAGGAGACCAAACGCCAAGTGCACCAAATGTAACCAAATGGGGCATGAAGCTGTAATTTGCAGGAACAATAATCAACAACAAGGTGTAGAGGCCAAAATTGCTTATCAGGAGGAGGAGGAGGAGGATCAATTGTTTGTGGCAACATGCTTCGTGGGTGGTGAGTCAAATGAAAGCTGGCTGATTGACAGTGGATGTACCAACCATATGACTCATGACAAGGAGTTGTTTAAAGATCTGAAGCCAACAAATATCACCAAAGTCAGAATTGGCAATGGAGACTACATCTCAGTCAAAGGAAAGGGGACTATTGCGATTGCCAGTTGTTTTAAAGTTACTTTTGAAAATGAATATTGCTTGATTAAGGATGCAGCAAATCAAGATATTTTCAAAGTAAAAATGAAAGGAAAAAGTTTTTCACTTAATCCTTTAGAGGAGAAGCAATCTGTTTTTGCTCTCAAAGAAGATGAAACACAGCTTTGGCACAAAAGAGTCGGTCACTATCATCATCAAGGGCTGCTACAACTAACGGAGTTGGCACTTGATTTTCCCAAGCTTAGTGAAGAAATCTCAAGCTGCAAAGCGTGTCATTTTGGAAAGCAAAATAGGAAGTCATTTCCCAAGTCATCTTGGAGAGCCACTCAAAAATTGCAGCTCATTCACACAGATGTTGCAGGTCCTCAGAGAACACCTTCTTTAAAAGGTAGTCTCTATTATATTGCTTTTATTGATGACTTCACCAGAATGTGCTGGATTTTTTTCTTGAAGTTTAAATCAGAGGTTGCTCATGTCTTTTGGAAGTTCAAGGCAAGAGTTGAAAATGAAAGTGGTTGCAAAATTCAAATGGTAAGGTCTGACAATGGGAAGGAGTATGTTTCGGCAGAATTTGACAAGTTTTGTGAAGATTCAGGCATAAAACATCAACTTACAGCTCCTTACACTCCTCAACAAAATGGAGTTAGTGAGAGGAGAAATAGATACATCATGGAGATGACAAGATGCATGCTGCATGAAAAGAGTTTGCCAAAGAAGTTTTGGGCAGAGGCAGCAAATACAGCTGTATTTCTTCAAAATAGGCTTCCCACAAAAGCATTGAAGGAAAAGACACCATTTGAGGCATGGTATGGGTACAAACCATCATTGAAATTTCTCAAAGTATTTGGTTGTTTGTGTTTCACTCATGTTCCACAGAGCAAGCGTGACAAACTTGATAGGAGAGCTTCACCGGGTGTCTTTATAGGCTATAGTTCTATCAGCAAAGCCTATAAAATTTTCCAACCACAAACTGGAAAGATTGTCGTGAGCAGGGATGTTCACTTCGAGGAAGATGAAGAGTGGAACTTTGATGATGCAGAGAAGAAAGGTCAGACCTTGGAAAAGATGAAATTCAAGTTTTTTGATTCAAGCATTGAAGAGGAAGATGACAGGCAGAATGAAATAGTAGATGATGCTTCCGTGAGAGGAACAAGGTTGCTTTCTGATATTTATGAAAGGTGCAATGTTGCTGTGTGTGAACCTGCAAACTATGCAGAAGCAAAGAAAGATCAAAGGTGGATAGCTGCAATGGAGGAGGAGTTGTCAATGATAGAGAAGAACAAAACTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTGGAGTTAAATGGGTGTTTAGAACCAAGCTTAATGCTGATGGCTCGATTAACAAGCACAAAGCCAGGCTTGTGGTTAAAGGGTATGCTCAAATCTTTGGTGTTGATTACTCTGATACTTTTGCTCCTGTTGCTAGAATGGACACAATCAGGTTACTATTTGCAATAGCTGCACAAAAGGGGTGGAAATTGTATCAGTTGGATGTCAAATCAGCTTTTTTGAATGGTGTCTTACAAGAAGAAATTTATGTTGAGCAGCCCGAAGGATGTGAGAAGCAAGGTGAAAGAAATAAAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTACTGAGCTTGGGATTTTTGAAAAGTCTATCAGAATCAACCTTATATGTTAAGCACAATGGTACTAACATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTACAGGAAACAATGCAGATCATATTCAAAATTTCAAATGGGAGATGATGAAGATGTTTGAAATGACAGATCTCGGGCTCATGTCCTACTTTCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTCATTTGCCAGAAAAAATATGCAAAGGAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCTGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAAGATGGTGCTGACAAAGTTGATGAAGGATATTTTAGGAGTTTAATTGGTTGCTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGCTGTGAGTATTTTGTCTCGTTTCATGCATTGTGCAAGTGAATTACATCTTAAGGCAGCAAAAAGAGTGATACGATATGTCAAAGGCACAAGTGATTTTGGTGTTAAGTTCACTAGGGGCAAGGAGTTCAAACTGATTGGTTTTTCTGATAGTGATTGGGGAGGTTCCATTGATGATATGAGAAGCACTTTAGGTTACTGTTTTACTCTTAGCTCTGGTGTTTTCTCTTGGAGCTCGAAAAAGCAAGAGATTGTAGCCCAATCCACTGCTGAAGCAGAATTTATTGCTGCAACAGCTACTGCCAATCAAGCTTTATGGCTGAGGAAAATTTTACTTGACCTTGATCTGGAGCAGAAGAAAAGCACGGAGATTCTTGTTGATAACAAAGCGGCTATTGCTATTTCTCATAATCCTGTGTTTTATAAGAAGACTAAACATTTTAACATCAAGTTATTTTTTTTTAAGGGAAGTGCAGAAAAGTGGAGAGGTGATTCTTGTCTACTGCAAAACAGAAGATCAAAAAATAACATCATTTTAGGCTTACTCAATGGGTATGTTGGTATTGGAGGTGCCATTTTAACCCAAATCTATTTAGGTATTTACGGCCCTAAAGATCCATCAAATCTTGTTCTTCTTTTTGCTTGGCTTCCCTCTGCGGTAATCCTCGTTCTTTCTTTCTCTATTCGACCAATCTGTATTCATAAACATCCTGAAGAACTCAAAGTGTTTTACCACTTGCTTTATGTCTCTGTTATTCTAGCTATGTTCATTCTCTTTTTAACCATTGCACAAAAAGAAGTAGCTTTCACTCGACGTGGATATACGAATGGTGCGGCCGTCATCGTTGTGTTACTATTCCTACCTCTTGTGATTGTATGTAGAGAAGAACACGTATTGTACAAACTCAACAAACAAAACGAGGATTCTTCCTTTAATATCTCGATTAATGATCATCAAAAGCCTCATAGCTCAATCACCACAGAAAAAACAGAGAACTCGCGGTCGTATTTCTCAAAAATATGGAACAAACCCGAAAGAGGAGAAGATTTCAGCATCTTGCAAGCTATTTTCAGTATAGATATGACTCTTATCTTTTTAGCTACTTTTTCTGGATCTGGTTCTGCTCTTACAGCCATTGATAATTTAGGCCAAGTCGCTGAATCACTTGCCTACCCGTCAGAAGCTATAAGCATCATCGTTTCTTGGGTTTCCGTATTCAATTTCTTCGGTCGAATCTTCTCCGGTTTCATCTCCGAAAACTTCATGATCAAATACAAATTACCTCGTCCTCTAACGTTTGCTGTCGCCTTCTTCATCACTGGCATTGGCCAGCTTATTGTTGCGTATCCATCATCAGGTTCAGTCTTCATTGCTTCAATCGTAATCGGGTTCGGATTTGGAATGCAAGTGCCATTGCTATTCACCATAATCTCAGAGCTATTTGGGCTAAAACATTACTCAACATTGTTCAATTGTGGGCAACTGGTAGTCCCAATTGGGTCTTATATACTAAACGTGGATGTAGTAGGGAGAATATATGATAAAGAAGCATTAGTTGACGGTATAAAGTTGACGGGCAGGGGATTAATTTGTACCGGAGCTCATTGTTTTAATGGATCTTTCACAATTTTGTCTGGAGCGACATTGTTTGGTGCTATAGTTATGCTTGCATTGGCTTATAGGACAAGAGAATTCTACAAAGGAGATGTATATAAGAAATATAGAGACGACGTGTGGATTACTCCAACTGATATGGAGTTCTATCACTTAGATAAGAAGAAAATTCGTGATTAA

Protein sequence

MGTKAWDYTKQVIQGRWFSVFAGLIMMVGNGSTYIYGTYSKVIKTEFNYSQTQLSILGFAKDLGSNVGIFAGLLAEVAPPWVLFLIGSVQNFTGFFLIWLSITHRIPQPKFWQMFLCVCLGTHSSNFANTAIMVTSVVNFPDRRENNNWYQSSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCFKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFFKGSAEKWRGDSCLLQNRRSKNNIILGLLNGYVGIGGAILTQIYLGIYGPKDPSNLVLLFAWLPSAVILVLSFSIRPICIHKHPEELKVFYHLLYVSVILAMFILFLTIAQKEVAFTRRGYTNGAAVIVVLLFLPLVIVCREEHVLYKLNKQNEDSSFNISINDHQKPHSSITTEKTENSRSYFSKIWNKPERGEDFSILQAIFSIDMTLIFLATFSGSGSALTAIDNLGQVAESLAYPSEAISIIVSWVSVFNFFGRIFSGFISENFMIKYKLPRPLTFAVAFFITGIGQLIVAYPSSGSVFIASIVIGFGFGMQVPLLFTIISELFGLKHYSTLFNCGQLVVPIGSYILNVDVVGRIYDKEALVDGIKLTGRGLICTGAHCFNGSFTILSGATLFGAIVMLALAYRTREFYKGDVYKKYRDDVWITPTDMEFYHLDKKKIRD

Homology

[Close]

BLAST of Cmc12g0319471 vs. NCBI nr
Match: TYK00004.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2491.1 bits (6455), Expect = 0.0e+00
Identity = 1256/1294 (97.06%), Postives = 1258/1294 (97.22%), Query Frame = 0


Query: 145  ENNNWYQ---SSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEAL 204
            E N W+    SSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEAL
Sbjct: 596  EENLWFSANCSSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEAL 655

Query: 205  DIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAY 264
            DIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAY
Sbjct: 656  DIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAY 715

Query: 265  EIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVF 324
            EIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVF
Sbjct: 716  EIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVF 775

Query: 325  KDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGA 384
            KDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGA
Sbjct: 776  KDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGA 835

Query: 385  LPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRR 444
            LPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRR
Sbjct: 836  LPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRR 895

Query: 445  PNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLID 504
            PNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLID
Sbjct: 896  PNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLID 955

Query: 505  SGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASC-------------- 564
            SGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASC              
Sbjct: 956  SGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPD 1015

Query: 565  ---------------FKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALK 624
                           FKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALK
Sbjct: 1016 INQNLLSVGQLIEKGFKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALK 1075

Query: 625  EDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRAT 684
            EDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRAT
Sbjct: 1076 EDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRAT 1135

Query: 685  QKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVEN 744
            QKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVEN
Sbjct: 1136 QKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVEN 1195

Query: 745  ESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRC 804
            ESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRC
Sbjct: 1196 ESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRC 1255

Query: 805  MLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTH 864
            MLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTH
Sbjct: 1256 MLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTH 1315

Query: 865  VPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKK 924
            VPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKK
Sbjct: 1316 VPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKK 1375

Query: 925  GQTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKK 984
            GQTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKK
Sbjct: 1376 GQTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKK 1435

Query: 985  DQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKG 1044
            DQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKG
Sbjct: 1436 DQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKG 1495

Query: 1045 YAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPE 1104
            YAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPE
Sbjct: 1496 YAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPE 1555

Query: 1105 GCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNIL 1164
            GCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNIL
Sbjct: 1556 GCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNIL 1615

Query: 1165 IVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKY 1224
            IVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKY
Sbjct: 1616 IVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKY 1675

Query: 1225 AKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNA 1284
            AKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNA
Sbjct: 1676 AKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNA 1735

Query: 1285 VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMR 1344
            VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMR
Sbjct: 1736 VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMR 1795

Query: 1345 STLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKS 1404
            STLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKS
Sbjct: 1796 STLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKS 1855

Query: 1405 TEILVDNKAAIAISHNPVFYKKTKHFNIKLFFFK 1407
            TEILVDNKAAIAISHNPVFYKKTKHFNIKLFF +
Sbjct: 1856 TEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLR 1889

[Close]

BLAST of Cmc12g0319471 vs. NCBI nr
Match: TYK21117.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2487.2 bits (6445), Expect = 0.0e+00
Identity = 1252/1285 (97.43%), Postives = 1255/1285 (97.67%), Query Frame = 0


Query: 151  QSSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEED 210
            +SSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEED
Sbjct: 102  ESSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEED 161

Query: 211  YEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSE 270
            YEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSE
Sbjct: 162  YEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSE 221

Query: 271  YEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKI 330
            YEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKI
Sbjct: 222  YEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKI 281

Query: 331  LVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENV 390
            LVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENV
Sbjct: 282  LVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENV 341

Query: 391  RNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCN 450
            RNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCN
Sbjct: 342  RNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCN 401

Query: 451  QMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTH 510
            QMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTH
Sbjct: 402  QMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTH 461

Query: 511  DKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASC----------------------- 570
            DKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASC                       
Sbjct: 462  DKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVG 521

Query: 571  ------FKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHK 630
                  FKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHK
Sbjct: 522  QLIEKGFKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHK 581

Query: 631  RVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTD 690
            RVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTD
Sbjct: 582  RVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTD 641

Query: 691  VAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMV 750
            VAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMV
Sbjct: 642  VAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMV 701

Query: 751  RSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPK 810
            RSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPK
Sbjct: 702  RSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPK 761

Query: 811  KFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKL 870
            KFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKL
Sbjct: 762  KFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKL 821

Query: 871  DRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKF 930
            DRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKF
Sbjct: 822  DRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKF 881

Query: 931  KFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAME 990
            KFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAME
Sbjct: 882  KFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAME 941

Query: 991  EELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDY 1050
            EELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDY
Sbjct: 942  EELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDY 1001

Query: 1051 SDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERN 1110
            SDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERN
Sbjct: 1002 SDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERN 1061

Query: 1111 KVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDL 1170
            KVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDL
Sbjct: 1062 KVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDL 1121

Query: 1171 LVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFK 1230
            LVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFK
Sbjct: 1122 LVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFK 1181

Query: 1231 MDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMH 1290
            MDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMH
Sbjct: 1182 MDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMH 1241

Query: 1291 CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTL 1350
            CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTL
Sbjct: 1242 CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTL 1301

Query: 1351 SSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKA 1407
            SSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKA
Sbjct: 1302 SSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKA 1361

[Close]

BLAST of Cmc12g0319471 vs. NCBI nr
Match: KAA0025843.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2462.2 bits (6380), Expect = 0.0e+00
Identity = 1239/1270 (97.56%), Postives = 1240/1270 (97.64%), Query Frame = 0


Query: 166  MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 225
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 226  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 285
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 286  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 345
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 346  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 405
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 406  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 465
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 466  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 525
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 526  VRIGNGDYISVKGKGTIAIASC-----------------------------FKVTFENEY 585
            VRIGNGDYISVKGKGTIAIASC                             FKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 586  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 645
            CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 646  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 705
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 706  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 765
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 766  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 825
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 826  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 885
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 886  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 945
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 946  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 1005
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 1006 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 1065
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 1066 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1125
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 1126 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1185
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1186 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1245
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1246 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1305
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1306 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1365
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1366 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1407
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

[Close]

BLAST of Cmc12g0319471 vs. NCBI nr
Match: KAA0036309.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0039006.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0039248.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0063721.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYJ96423.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2462.2 bits (6380), Expect = 0.0e+00
Identity = 1239/1270 (97.56%), Postives = 1240/1270 (97.64%), Query Frame = 0


Query: 166  MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 225
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 226  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 285
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 286  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 345
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 346  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 405
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 406  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 465
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 466  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 525
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 526  VRIGNGDYISVKGKGTIAIASC-----------------------------FKVTFENEY 585
            VRIGNGDYISVKGKGTIAIASC                             FKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 586  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 645
            CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 646  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 705
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 706  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 765
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 766  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 825
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 826  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 885
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 886  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 945
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 946  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 1005
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 1006 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 1065
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 1066 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1125
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 1126 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1185
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1186 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1245
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1246 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1305
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1306 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1365
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1366 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1407
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

[Close]

BLAST of Cmc12g0319471 vs. NCBI nr
Match: TYJ95793.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK04080.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK07482.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK23562.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK24808.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2460.6 bits (6376), Expect = 0.0e+00
Identity = 1238/1270 (97.48%), Postives = 1240/1270 (97.64%), Query Frame = 0


Query: 166  MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 225
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 226  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 285
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 286  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 345
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 346  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 405
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 406  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 465
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 466  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 525
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 526  VRIGNGDYISVKGKGTIAIASC-----------------------------FKVTFENEY 585
            VRIGNGDYISVKGKGTIAIASC                             FKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 586  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 645
            CLIKDAANQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 646  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 705
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 706  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 765
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 766  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 825
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 826  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 885
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 886  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 945
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 946  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 1005
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 1006 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 1065
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 1066 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1125
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 1126 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1185
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1186 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1245
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1246 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1305
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1306 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1365
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1366 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1407
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

[Close]

BLAST of Cmc12g0319471 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 7.3e-166
Identity = 415/1323 (31.37%), Postives = 655/1323 (49.51%), Query Frame = 0


Query: 182  FDGDN-YQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKA 241
            F+GDN +  W  RM   +    + + ++ D + P        A +           +A +
Sbjct: 11   FNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADL---------DERAAS 70

Query: 242  CLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESI 301
             +   +S  +   I+   +A  IW  L+S Y           L L ++     M E  + 
Sbjct: 71   AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTL---TNKLYLKKQLYALHMSEGTNF 130

Query: 302  KEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEIL 361
              +      +  Q+  LG   ++      +L S+P  ++   + + + K  T I L ++ 
Sbjct: 131  LSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGK--TTIELKDVT 190

Query: 362  NALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVK-- 421
            +AL   E+ R            P    + +    + + ++      R S+ Y ++G +  
Sbjct: 191  SALLLNEKMRKK----------PENQGQALITEGRGRSYQ------RSSNNYGRSGARGK 250

Query: 422  -----KGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHE-----AVICRNNNQQQGV 481
                 K     C +CN+ GH    C   PN +  K    G +     A + +NN+     
Sbjct: 251  SKNRSKSRVRNCYNCNQPGHFKRDC---PNPRKGKGETSGQKNDDNTAAMVQNNDN---- 310

Query: 482  EAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKVRI 541
               + +  EEEE       C         W++D+  ++H T  ++LF      +   V++
Sbjct: 311  --VVLFINEEEE-------CMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKM 370

Query: 542  GNGDYISVKGKGTIAI---ASC------------FKVTFENEYCLIKDA-----ANQD-- 601
            GN  Y  + G G I I     C             ++   +   L +D      ANQ   
Sbjct: 371  GNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWR 430

Query: 602  -------IFKVKMKGKSFSLNPLEEKQSVFALKEDE--TQLWHKRVGHYHHQGLLQLTEL 661
                   I K   +G  +  N  E  Q      +DE    LWHKR+GH   +GL  L + 
Sbjct: 431  LTKGSLVIAKGVARGTLYRTN-AEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKK 490

Query: 662  ALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLYY 721
            +L        +  C  C FGKQ+R SF  SS R    L L+++DV GP    S+ G+ Y+
Sbjct: 491  SLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYF 550

Query: 722  IAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDKF 781
            + FIDD +R  W++ LK K +V  VF KF A VE E+G K++ +RSDNG EY S EF+++
Sbjct: 551  VTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEY 610

Query: 782  CEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQNR 841
            C   GI+H+ T P TPQ NGV+ER NR I+E  R ML    LPK FW EA  TA +L NR
Sbjct: 611  CSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINR 670

Query: 842  LPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSIS 901
             P+  L  + P   W   + S   LKVFGC  F HVP+ +R KLD ++ P +FIGY    
Sbjct: 671  SPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEE 730

Query: 902  KAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSS---------- 961
              Y+++ P   K++ SRDV F E E     D  +K +      F    S+          
Sbjct: 731  FGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAEST 790

Query: 962  ---IEEEDDRQNEIVD-----DASVRGT-------------------RLLSDIYERCNVA 1021
               + E+ ++  E+++     D  V                      R+ S  Y      
Sbjct: 791  TDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYV 850

Query: 1022 VCEPANYAEAKKD-------QRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRT 1081
            +       E+ K+        + + AM+EE+  ++KN T+ LV+ P+ ++ +  KWVF+ 
Sbjct: 851  LISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKL 910

Query: 1082 KLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDV 1141
            K + D  + ++KARLVVKG+ Q  G+D+ + F+PV +M +IR + ++AA    ++ QLDV
Sbjct: 911  KKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDV 970

Query: 1142 KSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGF 1201
            K+AFL+G L+EEIY+EQPEG E  G+++ V  L K+LYGLKQAPR WY K D  + S  +
Sbjct: 971  KTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTY 1030

Query: 1202 LKSLSESTLYVKH-NGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSY 1261
            LK+ S+  +Y K  +  N +I+ LYVDD+L+ G +   I   K ++ K F+M DLG    
Sbjct: 1031 LKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQ 1090

Query: 1262 FLGIEI--KQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEG 1321
             LG++I  ++   ++++ Q+KY + +L++F M   K VSTP+    KL K+     V+E 
Sbjct: 1091 ILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEK 1150

Query: 1322 ------YFRSLIGCLMY-LTATRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSD 1381
                   + S +G LMY +  TRPDI +AV ++SRF+    + H +A K ++RY++GT+ 
Sbjct: 1151 GNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTG 1210

Query: 1382 FGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEA 1407
              + F  G +  L G++D+D  G ID+ +S+ GY FT S G  SW SK Q+ VA ST EA
Sbjct: 1211 DCLCF-GGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEA 1270

[Close]

BLAST of Cmc12g0319471 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 505.4 bits (1300), Expect = 2.8e-141
Identity = 400/1406 (28.45%), Postives = 655/1406 (46.59%), Query Frame = 0


Query: 182  FDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKAC 241
            FDG+ Y +W  R+ A +   D+ + V+       +P+    +  KA++        AK+ 
Sbjct: 11   FDGEKYAIWKFRIRALLAEQDVLKVVD-----GLMPNEVDDSWKKAER-------CAKST 70

Query: 242  LFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIK 301
            +   +S +      +  +A +I   L + Y   ER      L L +     K+    S+ 
Sbjct: 71   IIEYLSDSFLNFATSDITARQILENLDAVY---ERKSLASQLALRKRLLSLKLSSEMSLL 130

Query: 302  EYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILN 361
             +     ++ +++   G+  ++   +  +L+++P  ++  I+A+E   +   +TLA + N
Sbjct: 131  SHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSE-ENLTLAFVKN 190

Query: 362  ALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGS 421
             L  QE +         +  + A  H N  NN  K    KN+++  +      +  K   
Sbjct: 191  RLLDQEIKIKNDHNDTSKKVMNAIVHNN--NNTYKNNLFKNRVTKPKKIFKGNSKYK--- 250

Query: 422  YPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQQGVEAK------IAYQ 481
               C HC ++GH    C+              H   I  N N++   + +      IA+ 
Sbjct: 251  -VKCHHCGREGHIKKDCF--------------HYKRILNNKNKENEKQVQTATSHGIAFM 310

Query: 482  EEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKD----LKPTNITKVRIGNG 541
             +E  +   +  C         +++DSG ++H+ +D+ L+ D    + P  I   +   G
Sbjct: 311  VKEVNNTSVMDNC--------GFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAK--QG 370

Query: 542  DYISVKGKGTIAIASCFKVTFENEYCLIKDAANQDIFKVK------------MKGKSFSL 601
            ++I    +G + + +  ++T E +    K+AA  ++  VK              G + S 
Sbjct: 371  EFIYATKRGIVRLRNDHEITLE-DVLFCKEAAG-NLMSVKRLQEAGMSIEFDKSGVTISK 430

Query: 602  NPLE----------------EKQSVFALKEDETQLWHKRVGHYHHQGLLQL-------TE 661
            N L                 +  S+ A  ++  +LWH+R GH     LL++        +
Sbjct: 431  NGLMVVKNSGMLNNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQ 490

Query: 662  LALDFPKLSEEISSCKACHFGKQNRKSFP--KSSWRATQKLQLIHTDVAGPQRTPSLKGS 721
              L+  +LS EI  C+ C  GKQ R  F   K      + L ++H+DV GP    +L   
Sbjct: 491  SLLNNLELSCEI--CEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDK 550

Query: 722  LYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEF 781
             Y++ F+D FT  C  + +K+KS+V  +F  F A+ E     K+  +  DNG+EY+S E 
Sbjct: 551  NYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEM 610

Query: 782  DKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFL 841
             +FC   GI + LT P+TPQ NGVSER  R I E  R M+    L K FW EA  TA +L
Sbjct: 611  RQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYL 670

Query: 842  QNRLPTKAL--KEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIG 901
             NR+P++AL    KTP+E W+  KP LK L+VFG   + H+ ++K+ K D ++   +F+G
Sbjct: 671  INRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHI-KNKQGKFDDKSFKSIFVG 730

Query: 902  YSSISKAYKIFQPQTGKIVVSRD-------------VHFE-------------------- 961
            Y      +K++     K +V+RD             V FE                    
Sbjct: 731  YE--PNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSR 790

Query: 962  ------------------------EDEEWNF-DDAEKKGQT------------------L 1021
                                    E E  NF +D+ K  QT                   
Sbjct: 791  KIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSK 850

Query: 1022 EKMKFKFFDSSIEEEDDRQNE-----------------------IVDDASVRGTRLLSDI 1081
            E  K+   +S   + DD  NE                       I +     G  +++  
Sbjct: 851  ESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRR 910

Query: 1082 YER---------------CNVAVCE--------PANYAEAK-KDQR--WIAAMEEELSMI 1141
             ER                N  V          P ++ E + +D +  W  A+  EL+  
Sbjct: 911  SERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAH 970

Query: 1142 EKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAP 1201
            + N TW +  RP+++ ++  +WVF  K N  G+  ++KARLV +G+ Q + +DY +TFAP
Sbjct: 971  KINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAP 1030

Query: 1202 VARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLK 1261
            VAR+ + R + ++  Q   K++Q+DVK+AFLNG L+EEIY+  P+G     +   V  L 
Sbjct: 1031 VARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSD--NVCKLN 1090

Query: 1262 KALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYV--KHNGTNILIVSLYVDDLLVTG 1321
            KA+YGLKQA R W+   ++ L    F+ S  +  +Y+  K N    + V LYVDD+++  
Sbjct: 1091 KAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIAT 1150

Query: 1322 NNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDEC 1381
             +   + NFK  +M+ F MTDL  + +F+GI I+  + ++++ Q  Y K+IL KF M+ C
Sbjct: 1151 GDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENC 1210

Query: 1382 KAVSTPMNQK---EKLCKEDGADKVDEGYFRSLIGCLMY-LTATRPDILNAVSILSRFMH 1405
             AVSTP+  K   E L  ++  +       RSLIGCLMY +  TRPD+  AV+ILSR+  
Sbjct: 1211 NAVSTPLPSKINYELLNSDEDCNTP----CRSLIGCLMYIMLCTRPDLTTAVNILSRYSS 1270

[Close]

BLAST of Cmc12g0319471 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 2.8e-141
Identity = 392/1417 (27.66%), Postives = 636/1417 (44.88%), Query Frame = 0


Query: 186  NYQVWAVRMEAYMEALDIWEAVEEDYEI-PALPDNPTMAQIKAQKEKKTKKSK-AKACLF 245
            NY +W+ ++ A  +  ++   ++    + PA        ++     +  ++ K   + + 
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVL 89

Query: 246  AAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEY 305
             A+S ++   +    +A +IW  L+  Y         ++   ++++     K T++I +Y
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQW----TKGTKTIDDY 149

Query: 306  SVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNAL 365
               L+   +Q+ LLG        VE++L ++PE+++  I  +   KD T  TL EI   L
Sbjct: 150  MQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIA-AKD-TPPTLTEIHERL 209

Query: 366  QAQEQRRAMRQEGAV--EGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGS 425
               E +        V    A    H      N      + N+   R ++  +K       
Sbjct: 210  LNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSK------- 269

Query: 426  YPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEED 485
              P    +   HP     +    KC  C   GH A  C   +Q Q   + +  Q+     
Sbjct: 270  --PWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRC---SQLQHFLSSVNSQQPPSPF 329

Query: 486  QLFV--ATCFVGGE-SNESWLIDSGCTNHMTHDKELFKDLKP-TNITKVRIGNGDYISVK 545
              +   A   +G   S+ +WL+DSG T+H+T D       +P T    V + +G  I + 
Sbjct: 330  TPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPIS 389

Query: 546  GKGTIAIAS----------CFKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPL----- 605
              G+ ++++           +          +    N +   V+    SF +  L     
Sbjct: 390  HTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVP 449

Query: 606  -----------------EEKQSVFALKEDET--QLWHKRVGHYHHQGLLQ-LTELALDFP 665
                              +  S+FA    +     WH R+GH     L   ++  +L   
Sbjct: 450  LLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVL 509

Query: 666  KLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLK--GSLYYIAF 725
              S +  SC  C   K N+  F +S+  +T+ L+ I++DV     +P L      YY+ F
Sbjct: 510  NPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDV---WSSPILSHDNYRYYVIF 569

Query: 726  IDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDKFCED 785
            +D FTR  W++ LK KS+V   F  FK  +EN    +I    SDNG E+V+    ++   
Sbjct: 570  VDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVA--LWEYFSQ 629

Query: 786  SGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQNRLPT 845
             GI H  + P+TP+ NG+SER++R+I+E    +L   S+PK +W  A   AV+L NRLPT
Sbjct: 630  HGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPT 689

Query: 846  KALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSISKAY 905
              L+ ++PF+  +G  P+   L+VFGC C+  +    + KLD ++   VF+GYS    AY
Sbjct: 690  PLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAY 749

Query: 906  KIFQPQTGKIVVSRDVHFEED---------------EE-------WN------------- 965
                 QT ++ +SR V F+E+               E+       W+             
Sbjct: 750  LCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLP 809

Query: 966  --------------------FDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN--------- 1025
                                F +++     L+      F SS E    RQN         
Sbjct: 810  APSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPT 869

Query: 1026 ------------------------------------------------------------ 1085
                                                                        
Sbjct: 870  QTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILI 929

Query: 1086 -------EIVD-------DASVRGTRLLSDIYE---RCNVAV-----CEPANYAEAKKDQ 1145
                   +IV+       +    GTR  + I +   + ++AV      EP    +A KD+
Sbjct: 930  HPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDE 989

Query: 1146 RWIAAMEEELSMIEKNKTWILVDRPQDR-KVIGVKWVFRTKLNADGSINKHKARLVVKGY 1205
            RW  AM  E++    N TW LV  P     ++G +W+F  K N+DGS+N++KARLV KGY
Sbjct: 990  RWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGY 1049

Query: 1206 AQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEG 1265
             Q  G+DY++TF+PV +  +IR++  +A  + W + QLDV +AFL G L +++Y+ QP G
Sbjct: 1050 NQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPG 1109

Query: 1266 CEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILI 1325
               +   N V  L+KALYGLKQAPRAWY ++  +LL++GF+ S+S+++L+V   G +I+ 
Sbjct: 1110 FIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVY 1169

Query: 1326 VSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYA 1385
            + +YVDD+L+TGN+   + N    + + F + D   + YFLGIE K+    + + Q++Y 
Sbjct: 1170 MLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYI 1229

Query: 1386 KEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAV 1411
             ++L +  M   K V+TPM    KL    G    D   +R ++G L YL  TRPDI  AV
Sbjct: 1230 LDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAV 1289

[Close]

BLAST of Cmc12g0319471 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 3.3e-134
Identity = 383/1426 (26.86%), Postives = 617/1426 (43.27%), Query Frame = 0


Query: 186  NYQVWAVRMEAYMEALDIWEAVEEDYEI-PALPDNPTMAQIKAQKEKKTKKSK-AKACLF 245
            NY +W+ ++ A  +  ++   ++    + PA      + ++     +  ++ K   + + 
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAIL 89

Query: 246  AAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEY 305
             A+S ++   +    +A +IW  L+  Y  +     +  L  I  F+             
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIY-ANPSYGHVTQLRFITRFD------------- 149

Query: 306  SVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNAL 365
                     Q+ LLG        VE++L ++P+ ++  I  +   KD T  +L EI   L
Sbjct: 150  ---------QLALLGKPMDHDEQVERVLENLPDDYKPVIDQIA-AKD-TPPSLTEIHERL 209

Query: 366  QAQEQR-RAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSY 425
              +E +  A+     V        H N   N       +NQ +  ++  YN    +  S+
Sbjct: 210  INRESKLLALNSAEVVPITANVVTHRNTNTN-------RNQNNRGDNRNYNNNNNRSNSW 269

Query: 426  PPCSHCNKQGHPPFKCWRRPN---AKCTKCNQMGHEAVIC-------RNNNQQQGVEAKI 485
             P S  ++  +      R+P     +C  C+  GH A  C          NQQQ      
Sbjct: 270  QPSSSGSRSDN------RQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFT 329

Query: 486  AYQEEEEEDQLFVATCFVGGESN-ESWLIDSGCTNHMTHDKELFKDLKP-TNITKVRIGN 545
             +Q          A   V    N  +WL+DSG T+H+T D       +P T    V I +
Sbjct: 330  PWQPR--------ANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIAD 389

Query: 546  GDYISVKGKGTIAIASCFKVTFENEYCLIKD----------AANQDIFKVKMKGKSFSLN 605
            G  I +   G+ ++ +  +    N+   + +            N +   V+    SF + 
Sbjct: 390  GSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVK 449

Query: 606  PL----------------------EEKQSVFA--LKEDETQLWHKRVGHYHHQGLLQ-LT 665
             L                       +  S+FA    +     WH R+GH     L   ++
Sbjct: 450  DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 509

Query: 666  ELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSL 725
              +L     S ++ SC  C   K ++  F  S+  +++ L+ I++DV       S+    
Sbjct: 510  NHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDV-WSSPILSIDNYR 569

Query: 726  YYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFD 785
            YY+ F+D FTR  W++ LK KS+V   F  FK+ VEN    +I  + SDNG E+V     
Sbjct: 570  YYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR-- 629

Query: 786  KFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQ 845
             +    GI H  + P+TP+ NG+SER++R+I+EM   +L   S+PK +W  A + AV+L 
Sbjct: 630  DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLI 689

Query: 846  NRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSS 905
            NRLPT  L+ ++PF+  +G  P+ + LKVFGC C+  +    R KL+ ++    F+GYS 
Sbjct: 690  NRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSL 749

Query: 906  ISKAYKIFQPQTGKIVVSRDVHFEE--------------DEEWNFDDAEKKGQ------- 965
               AY      TG++  SR V F+E               +E   D A            
Sbjct: 750  TQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTT 809

Query: 966  ----------------------------TLEKMKFKFFDSSIEE---------------- 1025
                                        T +        SSI                  
Sbjct: 810  PLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQP 869

Query: 1026 ---------------------------EDDRQNEIVDDASV------------------- 1085
                                           QN  +  + +                   
Sbjct: 870  TAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPS 929

Query: 1086 -------------------------------RGTRLLSDI--------YERCNVAVCEPA 1145
                                             TR    I        Y     A  EP 
Sbjct: 930  SSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPR 989

Query: 1146 NYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDR-KVIGVKWVFRTKLNADGSINKH 1205
               +A KD RW  AM  E++    N TW LV  P     ++G +W+F  K N+DGS+N++
Sbjct: 990  TAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRY 1049

Query: 1206 KARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQE 1265
            KARLV KGY Q  G+DY++TF+PV +  +IR++  +A  + W + QLDV +AFL G L +
Sbjct: 1050 KARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTD 1109

Query: 1266 EIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYV 1325
            E+Y+ QP G   +   + V  L+KA+YGLKQAPRAWY ++  +LL++GF+ S+S+++L+V
Sbjct: 1110 EVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFV 1169

Query: 1326 KHNGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGE 1385
               G +I+ + +YVDD+L+TGN+   +++    + + F + +   + YFLGIE K+    
Sbjct: 1170 LQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQG 1229

Query: 1386 VFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTA 1411
            + + Q++Y  ++L +  M   K V+TPM    KL    G    D   +R ++G L YL  
Sbjct: 1230 LHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAF 1289

[Close]

BLAST of Cmc12g0319471 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-38
Identity = 100/304 (32.89%), Postives = 161/304 (52.96%), Query Frame = 0


Query: 1051 LDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLS 1110
            +DV +AFLN  + E IYV+QP G   +   + V+ L   +YGLKQAP  W   I+  L  
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 1111 LGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLM 1170
            +GF +   E  LY +      + +++YVDDLLV   +       K E+ K++ M DLG +
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 1171 SYFLGIEIKQ-GQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDE 1230
              FLG+ I Q   G++ +  + Y  +   + +++  K   TP+   + L +       D 
Sbjct: 121  DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 1231 GYFRSLIGCLMYLTAT-RPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKF 1290
              ++S++G L++   T RPDI   VS+LSRF+     +HL++A+RV+RY+  T    +K+
Sbjct: 181  TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 1291 TRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKK-QEIVAQSTAEAEFIA 1350
              G +  L  + D+  G   D   ST GY   L+    +WSSKK + ++   + EAE+I 
Sbjct: 241  RSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYIT 300

Query: 1351 ATAT 1352
            A+ T
Sbjct: 301  ASET 304

[Close]

BLAST of Cmc12g0319471 vs. ExPASy TrEMBL
Match: A0A5D3BL45 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00490 PE=4 SV=1)

HSP 1 Score: 2491.1 bits (6455), Expect = 0.0e+00
Identity = 1256/1294 (97.06%), Postives = 1258/1294 (97.22%), Query Frame = 0


Query: 145  ENNNWYQ---SSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEAL 204
            E N W+    SSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEAL
Sbjct: 596  EENLWFSANCSSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEAL 655

Query: 205  DIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAY 264
            DIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAY
Sbjct: 656  DIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAY 715

Query: 265  EIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVF 324
            EIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVF
Sbjct: 716  EIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVF 775

Query: 325  KDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGA 384
            KDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGA
Sbjct: 776  KDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGA 835

Query: 385  LPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRR 444
            LPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRR
Sbjct: 836  LPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRR 895

Query: 445  PNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLID 504
            PNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLID
Sbjct: 896  PNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLID 955

Query: 505  SGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASC-------------- 564
            SGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASC              
Sbjct: 956  SGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPD 1015

Query: 565  ---------------FKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALK 624
                           FKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALK
Sbjct: 1016 INQNLLSVGQLIEKGFKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALK 1075

Query: 625  EDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRAT 684
            EDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRAT
Sbjct: 1076 EDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRAT 1135

Query: 685  QKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVEN 744
            QKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVEN
Sbjct: 1136 QKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVEN 1195

Query: 745  ESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRC 804
            ESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRC
Sbjct: 1196 ESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRC 1255

Query: 805  MLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTH 864
            MLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTH
Sbjct: 1256 MLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTH 1315

Query: 865  VPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKK 924
            VPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKK
Sbjct: 1316 VPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKK 1375

Query: 925  GQTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKK 984
            GQTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKK
Sbjct: 1376 GQTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKK 1435

Query: 985  DQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKG 1044
            DQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKG
Sbjct: 1436 DQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKG 1495

Query: 1045 YAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPE 1104
            YAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPE
Sbjct: 1496 YAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPE 1555

Query: 1105 GCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNIL 1164
            GCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNIL
Sbjct: 1556 GCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNIL 1615

Query: 1165 IVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKY 1224
            IVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKY
Sbjct: 1616 IVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKY 1675

Query: 1225 AKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNA 1284
            AKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNA
Sbjct: 1676 AKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNA 1735

Query: 1285 VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMR 1344
            VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMR
Sbjct: 1736 VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMR 1795

Query: 1345 STLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKS 1404
            STLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKS
Sbjct: 1796 STLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKS 1855

Query: 1405 TEILVDNKAAIAISHNPVFYKKTKHFNIKLFFFK 1407
            TEILVDNKAAIAISHNPVFYKKTKHFNIKLFF +
Sbjct: 1856 TEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLR 1889

[Close]

BLAST of Cmc12g0319471 vs. ExPASy TrEMBL
Match: A0A5D3DBU0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00950 PE=4 SV=1)

HSP 1 Score: 2487.2 bits (6445), Expect = 0.0e+00
Identity = 1252/1285 (97.43%), Postives = 1255/1285 (97.67%), Query Frame = 0


Query: 151  QSSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEED 210
            +SSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEED
Sbjct: 102  ESSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEED 161

Query: 211  YEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSE 270
            YEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSE
Sbjct: 162  YEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSE 221

Query: 271  YEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKI 330
            YEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKI
Sbjct: 222  YEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKI 281

Query: 331  LVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENV 390
            LVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENV
Sbjct: 282  LVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENV 341

Query: 391  RNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCN 450
            RNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCN
Sbjct: 342  RNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCN 401

Query: 451  QMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTH 510
            QMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTH
Sbjct: 402  QMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTH 461

Query: 511  DKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASC----------------------- 570
            DKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASC                       
Sbjct: 462  DKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVG 521

Query: 571  ------FKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHK 630
                  FKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHK
Sbjct: 522  QLIEKGFKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHK 581

Query: 631  RVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTD 690
            RVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTD
Sbjct: 582  RVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTD 641

Query: 691  VAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMV 750
            VAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMV
Sbjct: 642  VAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMV 701

Query: 751  RSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPK 810
            RSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPK
Sbjct: 702  RSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPK 761

Query: 811  KFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKL 870
            KFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKL
Sbjct: 762  KFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKL 821

Query: 871  DRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKF 930
            DRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKF
Sbjct: 822  DRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKF 881

Query: 931  KFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAME 990
            KFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAME
Sbjct: 882  KFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAME 941

Query: 991  EELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDY 1050
            EELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDY
Sbjct: 942  EELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDY 1001

Query: 1051 SDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERN 1110
            SDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERN
Sbjct: 1002 SDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERN 1061

Query: 1111 KVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDL 1170
            KVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDL
Sbjct: 1062 KVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDL 1121

Query: 1171 LVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFK 1230
            LVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFK
Sbjct: 1122 LVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFK 1181

Query: 1231 MDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMH 1290
            MDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMH
Sbjct: 1182 MDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMH 1241

Query: 1291 CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTL 1350
            CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTL
Sbjct: 1242 CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTL 1301

Query: 1351 SSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKA 1407
            SSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKA
Sbjct: 1302 SSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKA 1361

[Close]

BLAST of Cmc12g0319471 vs. ExPASy TrEMBL
Match: A0A5D3E2V7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00370 PE=4 SV=1)

HSP 1 Score: 2462.2 bits (6380), Expect = 0.0e+00
Identity = 1239/1270 (97.56%), Postives = 1240/1270 (97.64%), Query Frame = 0


Query: 166  MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 225
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 226  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 285
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 286  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 345
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 346  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 405
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 406  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 465
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 466  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 525
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 526  VRIGNGDYISVKGKGTIAIASC-----------------------------FKVTFENEY 585
            VRIGNGDYISVKGKGTIAIASC                             FKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 586  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 645
            CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 646  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 705
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 706  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 765
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 766  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 825
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 826  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 885
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 886  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 945
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 946  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 1005
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 1006 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 1065
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 1066 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1125
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 1126 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1185
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1186 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1245
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1246 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1305
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1306 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1365
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1366 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1407
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

[Close]

BLAST of Cmc12g0319471 vs. ExPASy TrEMBL
Match: A0A5A7SMD9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001130 PE=4 SV=1)

HSP 1 Score: 2462.2 bits (6380), Expect = 0.0e+00
Identity = 1239/1270 (97.56%), Postives = 1240/1270 (97.64%), Query Frame = 0


Query: 166  MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 225
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 226  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 285
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 286  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 345
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 346  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 405
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 406  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 465
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 466  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 525
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 526  VRIGNGDYISVKGKGTIAIASC-----------------------------FKVTFENEY 585
            VRIGNGDYISVKGKGTIAIASC                             FKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 586  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 645
            CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 646  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 705
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 706  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 765
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 766  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 825
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 826  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 885
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 886  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 945
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 946  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 1005
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 1006 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 1065
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 1066 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1125
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 1126 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1185
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1186 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1245
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1246 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1305
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1306 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1365
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1366 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1407
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

[Close]

BLAST of Cmc12g0319471 vs. ExPASy TrEMBL
Match: A0A5D3DMJ1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00670 PE=4 SV=1)

HSP 1 Score: 2460.6 bits (6376), Expect = 0.0e+00
Identity = 1238/1270 (97.48%), Postives = 1240/1270 (97.64%), Query Frame = 0


Query: 166  MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 225
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 226  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 285
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 286  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 345
            IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 346  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 405
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 406  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 465
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 466  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 525
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 526  VRIGNGDYISVKGKGTIAIASC-----------------------------FKVTFENEY 585
            VRIGNGDYISVKGKGTIAIASC                             FKVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 586  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 645
            CLIKDAANQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 646  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 705
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 706  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 765
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 766  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 825
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 826  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 885
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 886  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 945
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 946  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 1005
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 1006 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 1065
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 1066 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1125
            LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 1126 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1185
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1186 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1245
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1246 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1305
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1306 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1365
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1366 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1407
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

[Close]

BLAST of Cmc12g0319471 vs. TAIR 10
Match: AT2G28120.1 (Major facilitator superfamily protein )

HSP 1 Score: 385.6 bits (989), Expect = 2.3e-106
Identity = 203/423 (47.99%), Postives = 284/423 (67.14%), Query Frame = 0


Query: 1419 LQNRRSKNNIILGLLNGYVGIGGAILTQIYLGIYGPKDPSNLVLLFAWLPSAVILVLSFS 1478
            ++N      ++LGLL GYVG+ GAI TQ+Y  IYG  D  +L+LL AWLP+AV LV  + 
Sbjct: 138  VKNFPESRGVMLGLLKGYVGLSGAIFTQLYFAIYG-HDSKSLILLIAWLPAAVSLVFVYL 197

Query: 1479 IRPICIHKHPEELKVFYHLLYVSVILAMFILFLTIAQKEVAFTRRGYTNGAAVIVVLLFL 1538
            IR   + +   EL VFY  LY+S+ LA+F++ + IA+K+V F++  Y   A +   LLF+
Sbjct: 198  IREKKVVRQRNELSVFYQFLYISIFLALFLMAMNIAEKQVHFSKAAYAASATICCALLFV 257

Query: 1539 PLVIVCREEHVLYKLNKQNEDSSFNISIN------DHQKPHSSITTEKTENSRSYFSKIW 1598
            PL +  ++E  ++ + K   +    + +       D  +  ++    + + ++S FS ++
Sbjct: 258  PLTVSVKQELEVWNMMKLPIEEPSEVKVEKPKKELDLDQDKAAKVNGEEKETKSCFSTVF 317

Query: 1599 NKPERGEDFSILQAIFSIDMTLIFLATFSGSGSALTAIDNLGQVAESLAYPSEAISIIVS 1658
            + P RGED++ILQA+ S DM ++F+ATF G GS+LTA+DNLGQ+ ESL YP+  +S  VS
Sbjct: 318  SPPPRGEDYTILQALLSTDMIILFVATFCGLGSSLTAVDNLGQIGESLGYPNHTVSSFVS 377

Query: 1659 WVSVFNFFGRIFSGFISENFMIKYKLPRPLTFAVAFFITGIGQLIVAYPSSGSVFIASIV 1718
             VS++N+FGR+FSGF+SE  + KYKLPRPL   +   ++  G L++A+P  GSV+IASI+
Sbjct: 378  LVSIWNYFGRVFSGFVSEYLLAKYKLPRPLMMTLVLLLSCAGHLLIAFPVPGSVYIASIL 437

Query: 1719 IGFGFGMQVPLLFTIISELFGLKHYSTLFNCGQLVVPIGSYILNVDVVGRIYDKEALVDG 1778
            +GF FG Q+PLLF IISELFGLK+YSTLFNCGQL  P+GSYILNV V G +YDKEAL   
Sbjct: 438  MGFSFGAQLPLLFAIISELFGLKYYSTLFNCGQLASPLGSYILNVRVTGMLYDKEALK-- 497

Query: 1779 IKLTGRG--------LICTGAHCFNGSFTILSGATLFGAIVMLALAYRTREFYKGDVYKK 1828
             +LT RG        L C G+ C+   F IL+  T FGA+V L LA RTREFYKGD+YKK
Sbjct: 498  -QLTARGLTRKDVKDLTCLGSQCYKLPFLILAAVTFFGALVSLGLAIRTREFYKGDIYKK 556

HSP 2 Score: 165.6 bits (418), Expect = 3.7e-40
Identity = 77/148 (52.03%), Postives = 103/148 (69.59%), Query Frame = 0


Query: 15  GRWFSVFAGLIMMVGNGSTYIYGTYSKVIKTEFNYSQTQLSILGFAKDLGSNVGIFAGLL 74
           GRWF VFA  ++M   G+TY++GTYSK IK+   Y QT L++LGF KDLG+NVG+ +GL+
Sbjct: 16  GRWFMVFASFLIMACAGATYLFGTYSKDIKSTLGYDQTTLNLLGFFKDLGANVGVLSGLI 75

Query: 75  AEVAPPWVLFLIGSVQNFTGFFLIWLSITHRIPQPKFWQMFLCVCLGTHSSNFANTAIMV 134
           AEV P W +  IGS  NF G+F+IWL++T ++ +PK WQM L +C+G +S NFANT  +V
Sbjct: 76  AEVTPTWFVLTIGSAMNFVGYFMIWLTVTGKVAKPKVWQMCLYICIGANSQNFANTGALV 135

Query: 135 TSVVNFPDRRENNNWYQSSLLKGSVSVS 163
           T V NFP+ R         LLKG V +S
Sbjct: 136 TCVKNFPESR----GVMLGLLKGYVGLS 159

[Close]

BLAST of Cmc12g0319471 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 356.3 bits (913), Expect = 1.5e-97
Identity = 188/465 (40.43%), Postives = 283/465 (60.86%), Query Frame = 0


Query: 937  CNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLN 996
            C     EP+ Y EAK+   W  AM++E+  +E   TW +   P ++K IG KWV++ K N
Sbjct: 79   CIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYN 138

Query: 997  ADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSA 1056
            +DG+I ++KARLV KGY Q  G+D+ +TF+PV ++ +++L+ AI+A   + L+QLD+ +A
Sbjct: 139  SDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198

Query: 1057 FLNGVLQEEIYVEQPEG-CEKQGER---NKVYLLKKALYGLKQAPRAWYSKIDEHLLSLG 1116
            FLNG L EEIY++ P G   +QG+    N V  LKK++YGLKQA R W+ K    L+  G
Sbjct: 199  FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFG 258

Query: 1117 FLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSY 1176
            F++S S+ T ++K   T  L V +YVDD+++  NN   +   K ++   F++ DLG + Y
Sbjct: 259  FVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKY 318

Query: 1177 FLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYF 1236
            FLG+EI +    + ICQ+KYA ++L +  +  CK  S PM+         G D VD   +
Sbjct: 319  FLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 378

Query: 1237 RSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK 1296
            R LIG LMYL  TR DI  AV+ LS+F       H +A  +++ Y+KGT   G+ ++   
Sbjct: 379  RRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQA 438

Query: 1297 EFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATA 1356
            E +L  FSD+ +    D  RST GYC  L + + SW SKKQ++V++S+AEAE+ A +   
Sbjct: 439  EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFAT 498

Query: 1357 NQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKH 1398
            ++ +WL +   +L L   K T +  DN AAI I+ N VF+++TKH
Sbjct: 499  DEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKH 543

[Close]

BLAST of Cmc12g0319471 vs. TAIR 10
Match: AT2G39210.1 (Major facilitator superfamily protein )

HSP 1 Score: 347.4 bits (890), Expect = 6.9e-95
Identity = 186/435 (42.76%), Postives = 274/435 (62.99%), Query Frame = 0


Query: 1419 LQNRRSKNNIILGLLNGYVGIGGAILTQIYLGIYGPKDPSNLVLLFAWLPSAVILVLSFS 1478
            ++N      ++LG+L GYVG+ GAI+TQ+Y   YG +D   L+L+  WLP+ V      +
Sbjct: 142  VKNFPESRGVVLGILKGYVGLSGAIITQLYRAFYG-EDTKELILMIGWLPAIVSFAFLRT 201

Query: 1479 IRPICIHKHPEELKVFYHLLYVSVILAMFILFLTIAQKEVAFTRRGYTNGAAVIVVLLFL 1538
            IR + + +   ELKVFY+ LY+S+ LA F++ + I  K   FT+  +   AAV++VLL L
Sbjct: 202  IRIMKVKRQTNELKVFYNFLYISLGLATFLMVVIIINKLSGFTQSEFGGSAAVVIVLLLL 261

Query: 1539 PLVIVCREEHVLYKLNKQ---NEDSSFNISINDHQKPHSSITTEKTENSR---------S 1598
            P+++V  EE  L+K  KQ   N+ +  N+     +   S    +  E S+         S
Sbjct: 262  PIIVVILEEKKLWK-EKQVALNDPAPINVVTEKPKLDSSEFKDDDGEESKEVVEKVKTPS 321

Query: 1599 YFSKIWNKPERGEDFSILQAIFSIDMTLIFLATFSGSGSALTAIDNLGQVAESLAYPSEA 1658
             ++ ++N PERG+D++ILQA+FS+DM ++FLAT  G G  LTAIDNLGQ+  SL YP  +
Sbjct: 322  CWTTVFNPPERGDDYTILQALFSVDMLILFLATICGVGGTLTAIDNLGQIGNSLGYPKRS 381

Query: 1659 ISIIVSWVSVFNFFGRIFSGFISENFMIKYKLPRPLTFAVAFFITGIGQLIVAYPSSGSV 1718
            +S  VS VS++N++GR+ SG +SE F+IKYK PRPL   +   ++  G L++A+   G +
Sbjct: 382  VSTFVSLVSIWNYYGRVVSGVVSEIFLIKYKFPRPLMLTMVLLLSCAGHLLIAFNVPGGL 441

Query: 1719 FIASIVIGFGFGMQVPLLFTIISELFGLKHYSTLFNCGQLVVPIGSYILNVDVVGRIYDK 1778
            ++AS++IGF FG Q PLLF IISE+FGLK+YSTL+N G +  PIGSY+LNV V G +YD 
Sbjct: 442  YVASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGSVASPIGSYLLNVRVAGYLYDV 501

Query: 1779 EA-----LVDGIKLTGRGLICTGAHCFNGSFTILSGATLFGAIVMLALAYRTREFYKGDV 1837
            EA      +   ++ G+ L C G  CF  SF I++  TLFG +V + L  RT++FYK D+
Sbjct: 502  EAGKQYKALGKTRVEGQDLNCIGTSCFKLSFIIIAAVTLFGVLVSMVLVIRTKKFYKSDI 561

HSP 2 Score: 157.9 bits (398), Expect = 7.8e-38
Identity = 75/158 (47.47%), Postives = 105/158 (66.46%), Query Frame = 0


Query: 9   TKQVIQGRWFSVFAGLIMMVGNGSTYIYGTYSKVIKTEFNYSQTQLSILGFAKDLGSNVG 68
           T Q++ GRWF  F  L++M   G+TY++G YS  IK    Y QT L++L F KDLG+NVG
Sbjct: 14  TIQILTGRWFMFFGSLLIMSTAGATYMFGIYSGDIKETLGYDQTTLNLLSFFKDLGANVG 73

Query: 69  IFAGLLAEVAPPWVLFLIGSVQNFTGFFLIWLSITHRIPQPKFWQMFLCVCLGTHSSNFA 128
           + AGLL EV PPW + LIG++ NF G+F+IWL++T RI +P+ W M L +C+G +S +FA
Sbjct: 74  VLAGLLNEVTPPWFILLIGAILNFFGYFMIWLAVTERISKPQVWHMCLYICVGANSQSFA 133

Query: 129 NTAIMVTSVVNFPDRRENNNWYQSSLLKGSVSVSCCVM 167
           NT  +VT V NFP+ R         +LKG V +S  ++
Sbjct: 134 NTGSLVTCVKNFPESR----GVVLGILKGYVGLSGAII 167

[Close]

BLAST of Cmc12g0319471 vs. TAIR 10
Match: AT1G74780.1 (Nodulin-like / Major Facilitator Superfamily protein )

HSP 1 Score: 188.7 bits (478), Expect = 4.1e-47
Identity = 131/408 (32.11%), Postives = 217/408 (53.19%), Query Frame = 0


Query: 1419 LQNRRSKNNIILGLLNGYVGIGGAILTQIYLGIYGPKDPSNLVLLFAWLPSAVILVLSFS 1478
            ++N        +G++ G++G+ GAIL Q+Y  +    DP++ +LL A  P+ + L++   
Sbjct: 144  VENFADYGGTAVGIMKGFLGLSGAILIQLYETLCA-GDPASFILLLAVTPTVLSLLVMPL 203

Query: 1479 IRPICIHKHPEELKVFYHLLYVSVILAMFILFLTIAQKEVAFTRRGYTNGAAVIVVLLFL 1538
            +R I      ++ K    L  VS+I+A +++ + I +     +          ++V+L L
Sbjct: 204  VR-IYETSVADDKKHLNGLSAVSLIIAAYLMIIIILKNTFGLSSWANIVTLVCLLVMLAL 263

Query: 1539 PLVIVCREEHVLYKLNKQNEDSSFNISINDHQKPHSSITTEKTENSRSYFSKIWNKPERG 1598
            PL+I  R +           D       +D+      I++ K   S +  S+  +K E G
Sbjct: 264  PLLIARRAQ----------RDGMEKTVPHDYS---PLISSPKATTSGNQSSEGDSKVEAG 323

Query: 1599 --EDFSILQAIFSIDMTLIFLATFSGSGSALTAIDNLGQVAESLAYPSEAISIIVSWVSV 1658
              E+ ++LQA+  +   L+FLA   G GS L+ I+N+ Q+ ESL Y S  I+ +VS  S+
Sbjct: 324  LSENLNLLQAMKKLSFWLLFLAMICGMGSGLSTINNIRQIGESLRYSSVEINSLVSLWSI 383

Query: 1659 FNFFGRIFSGFISENFMIKYKLPRPLTFAVAFFITGIGQLIVAYPSSGSVFIASIVIGFG 1718
            +NF GR  +G+ S+  + K   PRPL  A       IG LI+A    G++++ S+++G  
Sbjct: 384  WNFLGRFGAGYASDALLHKKGWPRPLLMAATLGTMSIGHLIIASGFQGNLYVGSVIVGVC 443

Query: 1719 FGMQVPLLFTIISELFGLKHYSTLFNCGQLVVPIGSYILNVDVVGRIYDKEALVDGIKLT 1778
            +G Q  L+ TI SELFG++H  T+FN   +  PIGSYI +V ++G IYDK A       +
Sbjct: 444  YGSQWSLMPTITSELFGIRHMGTIFNTISVASPIGSYIFSVRLIGYIYDKTA-------S 503

Query: 1779 GRGLICTGAHCFNGSFTILSGATLFGAIVMLALAYRTREFYKGDVYKK 1825
            G G  C G+HCF  SF I++    FG +V + L +RT+  Y+  + K+
Sbjct: 504  GEGNTCYGSHCFRLSFIIMASVAFFGFLVAIVLFFRTKTLYRQILVKR 529

HSP 2 Score: 97.8 bits (242), Expect = 9.5e-20
Identity = 50/148 (33.78%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 11  QVIQGRWFSVFAGLIMMVGNGSTYIYGTYSKVIKTEFNYSQTQLSILGFAKDLGSNVGIF 70
           ++++ +W ++ A + +   +G++Y +G YS V+K+  +Y Q+ L  +   KD+G+N G+F
Sbjct: 2   EILRTKWVAMTASIWIQCASGASYTFGIYSAVLKSTQSYDQSTLDTVSVFKDIGANAGVF 61

Query: 71  AGLLAEVAP----------------PWVLFLIGSVQNFTGFFLIWLSITHRIPQPKFWQM 130
           +GLL   A                 PWV+  +G++Q F G+FLIW S+T  I +P    M
Sbjct: 62  SGLLYTYATSNRLRGRGGGIGGAGGPWVVLAVGAIQCFAGYFLIWASVTGLIRKPPVPLM 121

Query: 131 FLCVCLGTHSSNFANTAIMVTSVVNFPD 143
            L + L   S  F NTA +V++V NF D
Sbjct: 122 CLFMFLAAQSQTFFNTANVVSAVENFAD 149

[Close]

BLAST of Cmc12g0319471 vs. TAIR 10
Match: AT5G50630.1 (Major facilitator superfamily protein )

HSP 1 Score: 188.7 bits (478), Expect = 4.1e-47
Identity = 130/414 (31.40%), Postives = 214/414 (51.69%), Query Frame = 0


Query: 1416 SCLLQNRRSKNNIILGLLNGYVGIGGAILTQIYLGIYGPKDPSNLVLLFAWLPSAVILVL 1475
            SC + N       ++G+L G+ G+ GAILTQ+YL ++ P   S+++L+ A  P  V+L L
Sbjct: 136  SC-IHNFPESRGPVVGILKGFSGLSGAILTQVYL-MFNPSHDSSVILMVALGPPVVVLAL 195

Query: 1476 SFSIRPI---CIHKHPEELKVFYHLLYVSVILAMFILFLTIAQKEVAFTRRGYTNGAAVI 1535
             F +RP+   C      +   F  +    V+LA+++L L + Q     T+   T   A++
Sbjct: 196  LFIVRPVERSCRTNLRSDDLRFLAIYGFCVVLAVYLLGLLVLQSVFDMTQTIITTSGAIL 255

Query: 1536 VVLLFLPLVIVCREEHVLYKLNKQNEDSSFNISIND--HQKPHSSITTEKTENSRSYFSK 1595
            V+ + +P+++                 SS  IS N+    KP    +      +R+   +
Sbjct: 256  VIFMVVPVLV---------------PFSSVFISGNNVTSVKPEEGTSNVDQHEARTLIER 315

Query: 1596 IWNKPER------GEDFSILQAIFSIDMTLIFLATFSGSGSALTAIDNLGQVAESLAYPS 1655
                PE+      GEDF++LQA+   D  LIF++   G GS +T IDNLGQ+  SL Y +
Sbjct: 316  SDRPPEKKRAPCIGEDFTLLQALGQADFWLIFMSLVLGVGSGITIIDNLGQICYSLGYSN 375

Query: 1656 EAISIIVSWVSVFNFFGRIFSGFISENFMIKYKLPRPLTFAVAFFITGIGQLIVAYPSSG 1715
                I VS +S+ NF GR+  G+ SE  + K  LPR L  +V   I  +G +  A    G
Sbjct: 376  --TKIFVSLISISNFLGRVAGGYFSELIIRKLSLPRTLAMSVVQAIMSLGLIYYAIDWPG 435

Query: 1716 SVFIASIVIGFGFGMQVPLLFTIISELFGLKHYSTLFNCGQLVVPIGSYILNVDVVGRIY 1775
             +++ +IVIG G+G    +    +S++FGLK + +L+N     +PIGS++ +  +   IY
Sbjct: 436  KIYVVTIVIGMGYGAHWAIAPASVSDIFGLKSFGSLYNFQITALPIGSFVFSGVIASNIY 495

Query: 1776 DKEALVD-GIKLTGRGLICTGAHCFNGSFTILSGATLFGAIVMLALAYRTREFY 1818
            D  A    G       L+CTG+ C++ + +++S   L   ++ L++ YRTR+FY
Sbjct: 496  DYYARKQAGPTTETESLVCTGSVCYSVTCSLMSMLCLMAMVLSLSVVYRTRKFY 530

HSP 2 Score: 107.8 bits (268), Expect = 9.2e-23
Identity = 47/134 (35.07%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 12  VIQGRWFSVFAGLIMMVGNGSTYIY-GTYSKVIKTEFNYSQTQLSILGFAKDLGSNVGIF 71
           ++  RW      + +    G  Y++ G+ S  IKT   Y+Q Q+++LG AK+LG  +G  
Sbjct: 12  LVNDRWLVFVCAMWVQSVAGVGYLFGGSMSPAIKTSLGYNQKQIALLGVAKNLGDAIGFV 71

Query: 72  AGLLAEVAPPWVLFLIGSVQNFTGFFLIWLSITHRIPQPKFWQMFLCVCLGTHSSNFANT 131
           +G L+EV+P WV+ L+G+ QN  G+ ++WL +T ++P    W +F+ + +GT+   + NT
Sbjct: 72  SGALSEVSPSWVVLLVGATQNLFGYGVVWLVVTGQLPNLPLWMLFVAIFVGTNGETYYNT 131

Query: 132 AIMVTSVVNFPDRR 145
           A +V+ + NFP+ R
Sbjct: 132 ASLVSCIHNFPESR 145

The following BLAST results are available for this feature:

BLAST of Cmc12g0319471 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK00004.1	0.0e+00	97.06	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK21117.1	0.0e+00	97.43	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0025843.1	0.0e+00	97.56	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0036309.1	0.0e+00	97.56	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYJ95793.1	0.0e+00	97.48	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc12g0319471 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.3e-166	31.37	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.8e-141	28.45	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	2.8e-141	27.66	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.3e-134	26.86	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P25600	1.5e-38	32.89	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc12g0319471 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BL45	0.0e+00	97.06	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DBU0	0.0e+00	97.43	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3E2V7	0.0e+00	97.56	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SMD9	0.0e+00	97.56	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DMJ1	0.0e+00	97.48	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc12g0319471 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28120.1	2.3e-106	47.99	Major facilitator superfamily protein	[more]
AT4G23160.1	1.5e-97	40.43	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
AT2G39210.1	6.9e-95	42.76	Major facilitator superfamily protein	[more]
AT1G74780.1	4.1e-47	32.11	Nodulin-like / Major Facilitator Superfamily protein	[more]
AT5G50630.1	4.1e-47	31.40	Major facilitator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 578..639 e-value: 2.4E-9 score: 36.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 647..826 e-value: 8.7E-47 score: 161.0
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 652..753 e-value: 7.5E-17 score: 61.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 641..816 score: 24.503267
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 232..372 e-value: 4.2E-27 score: 94.6
None	No IPR available	PANTHER	PTHR21576:SF29	PROTEIN NUCLEAR FUSION DEFECTIVE 4	coord: 1425..1828 coord: 3..170
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 1425..1828 coord: 3..170
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1297..1406 e-value: 8.29219E-50 score: 171.497
IPR036259	MFS transporter superfamily	GENE3D	1.20.1250.20	MFS general substrate transporter like domains	coord: 1422..1815 e-value: 2.1E-8 score: 35.3
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 19..144
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 1488..1815
IPR010658	Nodulin-like	PFAM	PF06813	Nodulin-like	coord: 1417..1543 e-value: 1.8E-24 score: 86.6 coord: 16..169 e-value: 4.7E-45 score: 154.0
IPR025314	Domain of unknown function DUF4219	PFAM	PF13961	DUF4219	coord: 182..208 e-value: 3.6E-11 score: 42.5
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 970..1212 e-value: 1.9E-87 score: 292.9
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 655..825
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 420..463
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 969..1405

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0319471.1	Cmc12g0319471.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding