Cmc12g0318601 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0318601
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr12: 3754684 .. 3755703 (-)
RNA-Seq Expression	Cmc12g0318601
Synteny	Cmc12g0318601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGATATCGGCCGCTCTGCGTCGCGATCACGTCGCGACAGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGCGACAGTTAAGAACCGCTACCCTTTACCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCTAAGATCGACCTGCGATCCGGCTACCACCAGTTGAGGATCAGTGACAGTGACATTCCTAAGACGGCCTTCCGTTCGAGATACAGACATTACGTGTTCATTGTGATATCTTTTGGTTTGACTAATGCTCCTGCGGTATTCATGGACTTGATGAACAGGGTGTTTCAGGACTTCTTAGACTCGTTCGTCATAGTTTTCATTGATGACATCTTGATTTACTCCAAGACTGAGGTTGAGCATGAGGAGCACTTGCACCAAGTTTTGGAGACTCTTCAAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGTGAGTTCTGGCTAAAGAAGGTATCTTTCCTTGAACATGTGGTGTACAGTAAGGGAGTTTCTGTGGATCCAGCAAAGATGGAAGCGGTTACCAATTGGCCTCGACTGTCTACAGTTAGCGAGATTCATAGTTTCCTGGGTTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCTTTGACCCAGTTGACCACGAATGGAACCCCTTTTGTTTCGAGCTCAGCATGCGAGAGCAACTTCCAGGAGCTTAAGCAGAAGCTAGTAACAGCACCAGTCCTGACAGTGCTCGATGGGTCGGGAAGTTTTGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGCTGTGTGCTGATGCAGCAGGGTAAAGTAGTTGCTTCTGCCTCCCGTCAGTTGAAGAGTCATGAGCAAAACTACCCTATCCACTACCTAGAGTTGGCAGCAGTGGTTTTTACACTAAAGATATGGAAGCACTACCTGTACGGTGAGAAGATACAGATTTTCACGGACCATAAGAGCCTGAAGTACTTCTTCACCTAG

mRNA sequence

ATGGGGGATATCGGCCGCTCTGCGTCGCGATCACGTCGCGACAGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGCGACAGTTAAGAACCGCTACCCTTTACCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCTAAGATCGACCTGCGATCCGGCTACCACCAGTTGAGGATCAGTGACAGTGACATTCCTAAGACGGCCTTCCGTTCGAGATACAGACATTACGTGTTCATTGTGATATCTTTTGGTTTGACTAATGCTCCTGCGGTATTCATGGACTTGATGAACAGGGTGTTTCAGGACTTCTTAGACTCGTTCGTCATAGTTTTCATTGATGACATCTTGATTTACTCCAAGACTGAGGTTGAGCATGAGGAGCACTTGCACCAAGTTTTGGAGACTCTTCAAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGTGAGTTCTGGCTAAAGAAGGTATCTTTCCTTGAACATGTGGTGTACAGTAAGGGAGTTTCTGTGGATCCAGCAAAGATGGAAGCGGTTACCAATTGGCCTCGACTGTCTACAGTTAGCGAGATTCATAGTTTCCTGGGTTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCTTTGACCCAGTTGACCACGAATGGAACCCCTTTTGTTTCGAGCTCAGCATGCGAGAGCAACTTCCAGGAGCTTAAGCAGAAGCTAGTAACAGCACCAGTCCTGACAGTGCTCGATGGGTCGGGAAGTTTTGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGCTGTGTGCTGATGCAGCAGGGTAAAGTAGTTGCTTCTGCCTCCCGTCAGTTGAAGAGTCATGAGCAAAACTACCCTATCCACTACCTAGAGTTGGCAGCAGTGGTTTTTACACTAAAGATATGGAAGCACTACCTGTACGGTGAGAAGATACAGATTTTCACGGACCATAAGAGCCTGAAGTACTTCTTCACCTAG

Coding sequence (CDS)

ATGGGGGATATCGGCCGCTCTGCGTCGCGATCACGTCGCGACAGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGCGACAGTTAAGAACCGCTACCCTTTACCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCTAAGATCGACCTGCGATCCGGCTACCACCAGTTGAGGATCAGTGACAGTGACATTCCTAAGACGGCCTTCCGTTCGAGATACAGACATTACGTGTTCATTGTGATATCTTTTGGTTTGACTAATGCTCCTGCGGTATTCATGGACTTGATGAACAGGGTGTTTCAGGACTTCTTAGACTCGTTCGTCATAGTTTTCATTGATGACATCTTGATTTACTCCAAGACTGAGGTTGAGCATGAGGAGCACTTGCACCAAGTTTTGGAGACTCTTCAAGCCAATAGACTGTATGCCAAGTTCTCCAAGTGTGAGTTCTGGCTAAAGAAGGTATCTTTCCTTGAACATGTGGTGTACAGTAAGGGAGTTTCTGTGGATCCAGCAAAGATGGAAGCGGTTACCAATTGGCCTCGACTGTCTACAGTTAGCGAGATTCATAGTTTCCTGGGTTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCTTTGACCCAGTTGACCACGAATGGAACCCCTTTTGTTTCGAGCTCAGCATGCGAGAGCAACTTCCAGGAGCTTAAGCAGAAGCTAGTAACAGCACCAGTCCTGACAGTGCTCGATGGGTCGGGAAGTTTTGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGCTGTGTGCTGATGCAGCAGGGTAAAGTAGTTGCTTCTGCCTCCCGTCAGTTGAAGAGTCATGAGCAAAACTACCCTATCCACTACCTAGAGTTGGCAGCAGTGGTTTTTACACTAAAGATATGGAAGCACTACCTGTACGGTGAGAAGATACAGATTTTCACGGACCATAAGAGCCTGAAGTACTTCTTCACCTAG

Protein sequence

MGDIGRSASRSRRDRSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSDIPKTAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEVEHEEHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRLSTVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTAPVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAVVFTLKIWKHYLYGEKIQIFTDHKSLKYFFT

Homology

[Close]

BLAST of Cmc12g0318601 vs. NCBI nr
Match: KAA0063946.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 585.9 bits (1509), Expect = 2.3e-163
Identity = 294/328 (89.63%), Postives = 307/328 (93.60%), Query Frame = 0


Query: 12   RRDRSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSD 71
            ++D SMRLCIDYRELNK TVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI DSD
Sbjct: 862  KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSD 921

Query: 72   IPKTAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEV 131
            IPKTAFRSRY HY F+V+SFGLTNAPAVFMDLMNRVF+DFLDSFVIVFIDDILIYSKTE 
Sbjct: 922  IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA 981

Query: 132  EHEEHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRL 191
            EHEEHLHQVLETL+AN+LYAKFSKCEFWL+KV+FL HVV S+GVSVDPAK+EAVTNWPR 
Sbjct: 982  EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRP 1041

Query: 192  STVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTA 251
            STVSEI SFLGLAGYYRRFVEDFSR ASPLTQLT  GTPFV S ACES+FQELKQKLVTA
Sbjct: 1042 STVSEIRSFLGLAGYYRRFVEDFSRKASPLTQLTRKGTPFVWSPACESSFQELKQKLVTA 1101

Query: 252  PVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAVVF 311
            PVLTV DGSGSFVIYSDASKKGLGCVLMQQGKVVA ASRQLKSHEQNYP H LELAAVVF
Sbjct: 1102 PVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF 1161

Query: 312  TLKIWKHYLYGEKIQIFTDHKSLKYFFT 340
             LKIW+ YLYGEKIQIFTDHKSLKYFFT
Sbjct: 1162 ALKIWRRYLYGEKIQIFTDHKSLKYFFT 1189

[Close]

BLAST of Cmc12g0318601 vs. NCBI nr
Match: KAA0066469.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 584.3 bits (1505), Expect = 6.6e-163
Identity = 292/328 (89.02%), Postives = 306/328 (93.29%), Query Frame = 0


Query: 12  RRDRSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSD 71
           ++D SMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI D D
Sbjct: 38  KKDGSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 97

Query: 72  IPKTAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEV 131
           IPKTAFRSRY HY F+V+SFGLTNAPAVFMDLMNRVF+DFLDSFVIVFIDDILIYSKTE 
Sbjct: 98  IPKTAFRSRYGHYEFVVVSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA 157

Query: 132 EHEEHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRL 191
           EHEEHLHQVLETLQAN+LYAKFSKCEFWL+KV+FL HVV S+GVSVDPAK+EAVTNWPR 
Sbjct: 158 EHEEHLHQVLETLQANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRP 217

Query: 192 STVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTA 251
           STVSEI SFLGLAGYYRRFVEDFSRIASPLTQLT   TPFV S ACE +FQELKQKLVTA
Sbjct: 218 STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKRTPFVWSPACERSFQELKQKLVTA 277

Query: 252 PVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAVVF 311
           PVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVA ASRQLK HEQNYP H LELAAVVF
Sbjct: 278 PVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVF 337

Query: 312 TLKIWKHYLYGEKIQIFTDHKSLKYFFT 340
            LKIW+HYLYGEKIQI+TDHKSLKYFFT
Sbjct: 338 ALKIWRHYLYGEKIQIYTDHKSLKYFFT 365

[Close]

BLAST of Cmc12g0318601 vs. NCBI nr
Match: TYK05193.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 584.3 bits (1505), Expect = 6.6e-163
Identity = 292/328 (89.02%), Postives = 306/328 (93.29%), Query Frame = 0


Query: 12   RRDRSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSD 71
            ++D SMRLCIDYRELNK TVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI D D
Sbjct: 679  KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 738

Query: 72   IPKTAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEV 131
            IPKTAFRSRY HY F+V+SFGLTNAPAVFMDLMNRVF+DFLDSFVIVFIDDILIYSKTE 
Sbjct: 739  IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA 798

Query: 132  EHEEHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRL 191
            EHEEHLHQVLETL+AN+LYAKFSKCEFWL+KV+FL HVV S+GVSVDP K+EAVTNWPR 
Sbjct: 799  EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVTNWPRP 858

Query: 192  STVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTA 251
            STVSEI SFLGLAGYYRRFVEDFSRIASPLTQLT  GTPFV S ACES+FQELKQKLVTA
Sbjct: 859  STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTA 918

Query: 252  PVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAVVF 311
            PVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVA ASRQLKSHEQNYP H LELAAVVF
Sbjct: 919  PVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF 978

Query: 312  TLKIWKHYLYGEKIQIFTDHKSLKYFFT 340
             LKIW+ YLYGEKIQIFTDHKSLKYFFT
Sbjct: 979  ALKIWRRYLYGEKIQIFTDHKSLKYFFT 1006

[Close]

BLAST of Cmc12g0318601 vs. NCBI nr
Match: TYK01306.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.9 bits (1504), Expect = 8.6e-163
Identity = 293/328 (89.33%), Postives = 306/328 (93.29%), Query Frame = 0


Query: 12  RRDRSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSD 71
           ++D SMRLCIDYRELNK TVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI DSD
Sbjct: 596 KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSD 655

Query: 72  IPKTAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEV 131
           IPKTAFR RY HY FIV+SFGLTNAPAVFMDLMNRVF+DFLDSFVIVFIDDILIYSKTE 
Sbjct: 656 IPKTAFRLRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA 715

Query: 132 EHEEHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRL 191
           EHEEHLHQVLETL+AN+LYAKFSKCEFWL+KV+FL HVV S+GVSVDPAK+EAVTNWPR 
Sbjct: 716 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRP 775

Query: 192 STVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTA 251
           STVSEI SFLGLAGYYRRFVEDFSRIASPLTQLT  GTPFV S  CES+FQ+LKQKLVTA
Sbjct: 776 STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTREGTPFVWSPTCESSFQKLKQKLVTA 835

Query: 252 PVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAVVF 311
           PVLTV DGSGSFVIYSDASKKGLGCVLMQQGKVVA ASRQLKSHEQNYP H LELAAVVF
Sbjct: 836 PVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF 895

Query: 312 TLKIWKHYLYGEKIQIFTDHKSLKYFFT 340
            LKIW+HYLY EKIQIFTDHKSLKYFFT
Sbjct: 896 ALKIWRHYLYDEKIQIFTDHKSLKYFFT 923

[Close]

BLAST of Cmc12g0318601 vs. NCBI nr
Match: KAA0063793.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.6 bits (1503), Expect = 1.1e-162
Identity = 291/328 (88.72%), Postives = 306/328 (93.29%), Query Frame = 0


Query: 12  RRDRSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSD 71
           ++D SMRLCIDYRELNK TVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI D D
Sbjct: 174 KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 233

Query: 72  IPKTAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEV 131
           IPKTAFRSRY HY F+V+SFGLTNAPAVFMDLMNRVF+DFLDSFVIVFIDDILIYSKTE 
Sbjct: 234 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA 293

Query: 132 EHEEHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRL 191
           EHEEHLHQVLETL+AN+LYAKFSKCEFWL+KV+FL HVV S+GVSVDPAK+EAVTNWPR 
Sbjct: 294 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRP 353

Query: 192 STVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTA 251
           STVSEI SFLGLAGYYRRFVEDFSRIASPLTQLT  GTPFV S ACE +FQELKQKLVTA
Sbjct: 354 STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTA 413

Query: 252 PVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAVVF 311
           PVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVA ASRQLK HEQNYP H LELAAVVF
Sbjct: 414 PVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVF 473

Query: 312 TLKIWKHYLYGEKIQIFTDHKSLKYFFT 340
            LKIW+HYLYGEKIQI+TDHKSLKYFFT
Sbjct: 474 ALKIWRHYLYGEKIQIYTDHKSLKYFFT 501

[Close]

BLAST of Cmc12g0318601 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.4e-60
Identity = 118/321 (36.76%), Postives = 188/321 (58.57%), Query Frame = 0


Query: 18  RLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSDIPKTAF 77
           R+ IDYR+LN+ T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  I KTAF
Sbjct: 262 RVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAF 321

Query: 78  RSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEVEHEEHL 137
            ++  HY ++ + FGL NAPA F   MN + +  L+   +V++DDI+I+S +  EH   +
Sbjct: 322 STKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSI 381

Query: 138 HQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRLSTVSEI 197
             V   L    L  +  KCEF  K+ +FL H+V   G+  +P K++A+ ++P  +   EI
Sbjct: 382 QLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEI 441

Query: 198 HSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACE--SNFQELKQKLVTAPVLT 257
            +FLGL GYYR+F+ +++ IA P+T      T  + +   E    F++LK  ++  P+L 
Sbjct: 442 RAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTK-IDTQKLEYIEAFEKLKALIIRDPILQ 501

Query: 258 VLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAVVFTLKI 317
           + D    FV+ +DAS   LG VL Q G  ++  SR L  HE NY     EL A+V+  K 
Sbjct: 502 LPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKT 561

Query: 318 WKHYLYGEKIQIFTDHKSLKY 337
           ++HYL G +  I +DH+ L++
Sbjct: 562 FRHYLLGRQFLIASDHQPLRW 581

[Close]

BLAST of Cmc12g0318601 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.4e-60
Identity = 120/325 (36.92%), Postives = 192/325 (59.08%), Query Frame = 0


Query: 15  RSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSDIPK 74
           +  R+ IDYR+LN+ TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +    + K
Sbjct: 260 QKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSK 319

Query: 75  TAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEVEHE 134
           TAF +++ HY ++ + FGL NAPA F   MN + +  L+   +V++DDI+++S +  EH 
Sbjct: 320 TAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHL 379

Query: 135 EHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRLSTV 194
           + L  V E L    L  +  KCEF  ++ +FL HV+   G+  +P K+EA+  +P  +  
Sbjct: 380 QSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKP 439

Query: 195 SEIHSFLGLAGYYRRFVEDFSRIASPLTQ-LTTNGTPFVSSSACESNFQELKQKLVTAPV 254
            EI +FLGL GYYR+F+ +F+ IA P+T+ L  N     ++   +S F++LK  +   P+
Sbjct: 440 KEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPI 499

Query: 255 LTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAVVFTL 314
           L V D +  F + +DAS   LG VL Q G  ++  SR L  HE NY     EL A+V+  
Sbjct: 500 LKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWAT 559

Query: 315 KIWKHYLYGEKIQIFTDHKSLKYFF 339
           K ++HYL G   +I +DH+ L + +
Sbjct: 560 KTFRHYLLGRHFEISSDHQPLSWLY 584

[Close]

BLAST of Cmc12g0318601 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 213.8 bits (543), Expect = 3.1e-54
Identity = 119/329 (36.17%), Postives = 189/329 (57.45%), Query Frame = 0


Query: 12  RRDRSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSD 71
           ++D + RLC+DYR LNKAT+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D
Sbjct: 667 KKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKD 726

Query: 72  IPKTAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEV 131
             KTAF +    Y + V+ FGL NAP+ F   M   F+D    FV V++DDILI+S++  
Sbjct: 727 RYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPE 786

Query: 132 EHEEHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRL 191
           EH +HL  VLE L+   L  K  KC+F  ++  FL + +  + ++    K  A+ ++P  
Sbjct: 787 EHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTP 846

Query: 192 STVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTA 251
            TV +   FLG+  YYRRF+ + S+IA P+     + + +      +   ++LK  L  +
Sbjct: 847 KTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQ--DKAIEKLKAALCNS 906

Query: 252 PVLTVLDGSGSFVIYSDASKKGLGCVLMQQGK------VVASASRQLKSHEQNYPIHYLE 311
           PVL   +   ++ + +DASK G+G VL +         VV   S+ L+S ++NYP   LE
Sbjct: 907 PVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELE 966

Query: 312 LAAVVFTLKIWKHYLYGEKIQIFTDHKSL 335
           L  ++  L  +++ L+G+   + TDH SL
Sbjct: 967 LLGIIKALHHFRYMLHGKHFTLRTDHISL 991

[Close]

BLAST of Cmc12g0318601 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 213.4 bits (542), Expect = 4.0e-54
Identity = 119/329 (36.17%), Postives = 188/329 (57.14%), Query Frame = 0


Query: 12  RRDRSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSD 71
           ++D + RLC+DYR LNKAT+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D
Sbjct: 641 KKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKD 700

Query: 72  IPKTAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEV 131
             KTAF +    Y + V+ FGL NAP+ F   M   F+D    FV V++DDILI+S++  
Sbjct: 701 RYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPE 760

Query: 132 EHEEHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRL 191
           EH +HL  VLE L+   L  K  KC+F  ++  FL + +  + ++    K  A+ ++P  
Sbjct: 761 EHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTP 820

Query: 192 STVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTA 251
            TV +   FLG+  YYRRF+ + S+IA P+     + + +      +    +LK  L  +
Sbjct: 821 KTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQ--DKAIDKLKDALCNS 880

Query: 252 PVLTVLDGSGSFVIYSDASKKGLGCVLMQQGK------VVASASRQLKSHEQNYPIHYLE 311
           PVL   +   ++ + +DASK G+G VL +         VV   S+ L+S ++NYP   LE
Sbjct: 881 PVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELE 940

Query: 312 LAAVVFTLKIWKHYLYGEKIQIFTDHKSL 335
           L  ++  L  +++ L+G+   + TDH SL
Sbjct: 941 LLGIIKALHHFRYMLHGKHFTLRTDHISL 965

[Close]

BLAST of Cmc12g0318601 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.7e-52
Identity = 118/332 (35.54%), Postives = 186/332 (56.02%), Query Frame = 0


Query: 18  RLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSDIPKTAF 77
           RL ID+R+LN+ T+ +RYP+P I  +   L  A  F+ +DL+SGYHQ+ +++ D  KT+F
Sbjct: 238 RLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSF 297

Query: 78  RSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEVEHEEHL 137
                 Y F  + FGL NA ++F   ++ V ++ +     V++DD++I+S+ E +H  H+
Sbjct: 298 SVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHI 357

Query: 138 HQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRLSTVSEI 197
             VL+ L    +     K  F+ + V +L  +V   G   DP K++A+  +P    V ++
Sbjct: 358 DTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKV 417

Query: 198 HSFLGLAGYYRRFVEDFSRIASPLTQLT--TNGT---------PFVSSSACESNFQELKQ 257
            SFLGLA YYR F++DF+ IA P+T +    NG+         P   +    + FQ L+ 
Sbjct: 418 RSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRN 477

Query: 258 KLVTAPV-LTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLE 317
            L +  V L   D    F + +DAS  G+G VL Q+G+ +   SR LK  EQNY  +  E
Sbjct: 478 ILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERE 537

Query: 318 LAAVVFTLKIWKHYLYGEK-IQIFTDHKSLKY 337
           L A+V+ L   +++LYG + I IFTDH+ L +
Sbjct: 538 LLAIVWALGKLQNFLYGSREINIFTDHQPLTF 569

[Close]

BLAST of Cmc12g0318601 vs. ExPASy TrEMBL
Match: A0A5A7VBY3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00920 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.1e-163
Identity = 294/328 (89.63%), Postives = 307/328 (93.60%), Query Frame = 0


Query: 12   RRDRSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSD 71
            ++D SMRLCIDYRELNK TVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI DSD
Sbjct: 862  KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSD 921

Query: 72   IPKTAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEV 131
            IPKTAFRSRY HY F+V+SFGLTNAPAVFMDLMNRVF+DFLDSFVIVFIDDILIYSKTE 
Sbjct: 922  IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA 981

Query: 132  EHEEHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRL 191
            EHEEHLHQVLETL+AN+LYAKFSKCEFWL+KV+FL HVV S+GVSVDPAK+EAVTNWPR 
Sbjct: 982  EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRP 1041

Query: 192  STVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTA 251
            STVSEI SFLGLAGYYRRFVEDFSR ASPLTQLT  GTPFV S ACES+FQELKQKLVTA
Sbjct: 1042 STVSEIRSFLGLAGYYRRFVEDFSRKASPLTQLTRKGTPFVWSPACESSFQELKQKLVTA 1101

Query: 252  PVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAVVF 311
            PVLTV DGSGSFVIYSDASKKGLGCVLMQQGKVVA ASRQLKSHEQNYP H LELAAVVF
Sbjct: 1102 PVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF 1161

Query: 312  TLKIWKHYLYGEKIQIFTDHKSLKYFFT 340
             LKIW+ YLYGEKIQIFTDHKSLKYFFT
Sbjct: 1162 ALKIWRRYLYGEKIQIFTDHKSLKYFFT 1189

[Close]

BLAST of Cmc12g0318601 vs. ExPASy TrEMBL
Match: A0A5A7VMK1 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00040 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 3.2e-163
Identity = 292/328 (89.02%), Postives = 306/328 (93.29%), Query Frame = 0


Query: 12  RRDRSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSD 71
           ++D SMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI D D
Sbjct: 38  KKDGSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 97

Query: 72  IPKTAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEV 131
           IPKTAFRSRY HY F+V+SFGLTNAPAVFMDLMNRVF+DFLDSFVIVFIDDILIYSKTE 
Sbjct: 98  IPKTAFRSRYGHYEFVVVSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA 157

Query: 132 EHEEHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRL 191
           EHEEHLHQVLETLQAN+LYAKFSKCEFWL+KV+FL HVV S+GVSVDPAK+EAVTNWPR 
Sbjct: 158 EHEEHLHQVLETLQANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRP 217

Query: 192 STVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTA 251
           STVSEI SFLGLAGYYRRFVEDFSRIASPLTQLT   TPFV S ACE +FQELKQKLVTA
Sbjct: 218 STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKRTPFVWSPACERSFQELKQKLVTA 277

Query: 252 PVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAVVF 311
           PVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVA ASRQLK HEQNYP H LELAAVVF
Sbjct: 278 PVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVF 337

Query: 312 TLKIWKHYLYGEKIQIFTDHKSLKYFFT 340
            LKIW+HYLYGEKIQI+TDHKSLKYFFT
Sbjct: 338 ALKIWRHYLYGEKIQIYTDHKSLKYFFT 365

[Close]

BLAST of Cmc12g0318601 vs. ExPASy TrEMBL
Match: A0A5D3BZN1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00670 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 3.2e-163
Identity = 292/328 (89.02%), Postives = 306/328 (93.29%), Query Frame = 0


Query: 12   RRDRSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSD 71
            ++D SMRLCIDYRELNK TVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI D D
Sbjct: 679  KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 738

Query: 72   IPKTAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEV 131
            IPKTAFRSRY HY F+V+SFGLTNAPAVFMDLMNRVF+DFLDSFVIVFIDDILIYSKTE 
Sbjct: 739  IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA 798

Query: 132  EHEEHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRL 191
            EHEEHLHQVLETL+AN+LYAKFSKCEFWL+KV+FL HVV S+GVSVDP K+EAVTNWPR 
Sbjct: 799  EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVTNWPRP 858

Query: 192  STVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTA 251
            STVSEI SFLGLAGYYRRFVEDFSRIASPLTQLT  GTPFV S ACES+FQELKQKLVTA
Sbjct: 859  STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTA 918

Query: 252  PVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAVVF 311
            PVLTV DGSG+FVIYSDASKKGLGCVLMQQGKVVA ASRQLKSHEQNYP H LELAAVVF
Sbjct: 919  PVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF 978

Query: 312  TLKIWKHYLYGEKIQIFTDHKSLKYFFT 340
             LKIW+ YLYGEKIQIFTDHKSLKYFFT
Sbjct: 979  ALKIWRRYLYGEKIQIFTDHKSLKYFFT 1006

[Close]

BLAST of Cmc12g0318601 vs. ExPASy TrEMBL
Match: A0A5D3BSV9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold827G00060 PE=4 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 4.2e-163
Identity = 293/328 (89.33%), Postives = 306/328 (93.29%), Query Frame = 0


Query: 12  RRDRSMRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSD 71
           ++D SMRLCIDYRELNK TVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI DSD
Sbjct: 596 KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSD 655

Query: 72  IPKTAFRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEV 131
           IPKTAFR RY HY FIV+SFGLTNAPAVFMDLMNRVF+DFLDSFVIVFIDDILIYSKTE 
Sbjct: 656 IPKTAFRLRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA 715

Query: 132 EHEEHLHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRL 191
           EHEEHLHQVLETL+AN+LYAKFSKCEFWL+KV+FL HVV S+GVSVDPAK+EAVTNWPR 
Sbjct: 716 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRP 775

Query: 192 STVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTA 251
           STVSEI SFLGLAGYYRRFVEDFSRIASPLTQLT  GTPFV S  CES+FQ+LKQKLVTA
Sbjct: 776 STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTREGTPFVWSPTCESSFQKLKQKLVTA 835

Query: 252 PVLTVLDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAVVF 311
           PVLTV DGSGSFVIYSDASKKGLGCVLMQQGKVVA ASRQLKSHEQNYP H LELAAVVF
Sbjct: 836 PVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF 895

Query: 312 TLKIWKHYLYGEKIQIFTDHKSLKYFFT 340
            LKIW+HYLY EKIQIFTDHKSLKYFFT
Sbjct: 896 ALKIWRHYLYDEKIQIFTDHKSLKYFFT 923

[Close]

BLAST of Cmc12g0318601 vs. ExPASy TrEMBL
Match: A0A5D3BNK8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4273G00040 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 5.5e-163
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 17  MRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSDIPKTA 76
           MRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSDIPKTA
Sbjct: 1   MRLCIDYRELNKATVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRISDSDIPKTA 60

Query: 77  FRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEVEHEEH 136
           FRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEVEHEEH
Sbjct: 61  FRSRYRHYVFIVISFGLTNAPAVFMDLMNRVFQDFLDSFVIVFIDDILIYSKTEVEHEEH 120

Query: 137 LHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRLSTVSE 196
           LHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRLSTVSE
Sbjct: 121 LHQVLETLQANRLYAKFSKCEFWLKKVSFLEHVVYSKGVSVDPAKMEAVTNWPRLSTVSE 180

Query: 197 IHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTAPVLTV 256
           IHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTAPVLTV
Sbjct: 181 IHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTAPVLTV 240

Query: 257 LDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAV 310
           LDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAV
Sbjct: 241 LDGSGSFVIYSDASKKGLGCVLMQQGKVVASASRQLKSHEQNYPIHYLELAAV 293

[Close]

BLAST of Cmc12g0318601 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 8.7e-20
Identity = 50/131 (38.17%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 136 HLHQVLETLQANRLYAKFSKCEFWLKKVSFL--EHVVYSKGVSVDPAKMEAVTNWPRLST 195
           HL  VL+  + ++ YA   KC F   ++++L   H++  +GVS DPAK+EA+  WP    
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 196 VSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTTNGTPFVSSSACESNFQELKQKLVTAPV 255
            +E+  FLGL GYYRRFV+++ +I  PLT+L    +   +  A  + F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALA-FKALKGAVTTLPV 122

Query: 256 LTVLDGSGSFV 265
           L + D    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc12g0318601 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063946.1	2.3e-163	89.63	pol protein [Cucumis melo var. makuwa]	[more]
KAA0066469.1	6.6e-163	89.02	pol protein [Cucumis melo var. makuwa]	[more]
TYK05193.1	6.6e-163	89.02	pol protein [Cucumis melo var. makuwa]	[more]
TYK01306.1	8.6e-163	89.33	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063793.1	1.1e-162	88.72	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc12g0318601 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	6.4e-60	36.76	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	6.4e-60	36.92	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q7LHG5	3.1e-54	36.17	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	4.0e-54	36.17	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P10401	1.7e-52	35.54	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]

BLAST of Cmc12g0318601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VBY3	1.1e-163	89.63	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61...	[more]
A0A5A7VMK1	3.2e-163	89.02	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00040 PE=...	[more]
A0A5D3BZN1	3.2e-163	89.02	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14...	[more]
A0A5D3BSV9	4.2e-163	89.33	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold82...	[more]
A0A5D3BNK8	5.5e-163	100.00	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4273G00040 P...	[more]

BLAST of Cmc12g0318601 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	8.7e-20	38.17	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 180..268 e-value: 4.7E-26 score: 92.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 35..170 e-value: 5.0E-65 score: 220.8
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 13..95 e-value: 5.0E-65 score: 220.8
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 17..337
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 17..337
None	No IPR available	CDD	cd01647	RT_LTR	coord: 19..170 e-value: 1.61734E-76 score: 230.945
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 264..339 e-value: 9.06577E-32 score: 113.742
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 235..327 e-value: 1.6E-27 score: 95.4
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 15..166 e-value: 1.7E-23 score: 83.3
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..177 score: 8.773122
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 13..339

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0318601.1	Cmc12g0318601.1	mRNA