Cmc10g0275031 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0275031
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Integrase catalytic domain-containing protein
Location	CMiso1.1chr10: 8797764 .. 8798543 (-)
RNA-Seq Expression	Cmc10g0275031
Synteny	Cmc10g0275031

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGACTGTAAGCCAATATCAACACCAATGGAGGTTAACAAAAAGTTCTACATGCATGAAGGCAAAGATCTTGTAGATCCAATAATGTATCGTCAGTTGGTAGGTAGTTTGATCTACCTTACCTTAACAAGACCTGATATCTCATACTCTGTCGCAGTTGTAAGTCGTTACATGCCGAAACCGAAGAAGCCTCAGCTTGAAACAGTTCGGAGAATTTTAAGATATCTCAGAAGAACAACTGAATATGGCCTTTTATATAAGAAAGGGCAAGATTGCAAGTTAGAAGGCTTCTATGATGCTGATTATGCAGAAGATCATGATACACGACGATCAACTACTAGGTACTTGTTTAAACTTGGTTGTGGAGCAGTTTCTTGGTGTAGCAAGAAACAACTAACAGTTGCCTTATCTACCACAGAGGCAGAGTATGGAGCAGCAACCATGGCAGCACAAGAGAATATGTGGATAAAACAACTAATGAAGGATTTGCGCCAAGAGATTAATCATGCAGCAATTTTATACTATGACAACCTATCTGGAGTTTACTTAGCTGAGAATCCAGTCTTCCATGCAAGGACCAAGCATGTGGAGGTACATTATCACTTCATTAGAGAAAAGGTACTTCAAGAGGAAATTGAAATGAAGCCAATAAAGACTGAAGATCAAATTGCAGATATTTTCACGAAAGATCTACCTGCAACCAAGCATACGGAATTTCTGCAACAACTCAGGATGATTGAAAGACCAAGGATAGTTAGTGTTGAGGGGGAGTGTTAA

mRNA sequence

ATGAGTGACTGTAAGCCAATATCAACACCAATGGAGGTTAACAAAAAGTTCTACATGCATGAAGGCAAAGATCTTGTAGATCCAATAATGTATCGTCAGTTGGTAGGTAGTTTGATCTACCTTACCTTAACAAGACCTGATATCTCATACTCTGTCGCAGTTGTAAGTCGTTACATGCCGAAACCGAAGAAGCCTCAGCTTGAAACAGTTCGGAGAATTTTAAGATATCTCAGAAGAACAACTGAATATGGCCTTTTATATAAGAAAGGGCAAGATTGCAAGTTAGAAGGCTTCTATGATGCTGATTATGCAGAAGATCATGATACACGACGATCAACTACTAGGTACTTGTTTAAACTTGGTTGTGGAGCAGTTTCTTGGTGTAGCAAGAAACAACTAACAGTTGCCTTATCTACCACAGAGGCAGAGTATGGAGCAGCAACCATGGCAGCACAAGAGAATATGTGGATAAAACAACTAATGAAGGATTTGCGCCAAGAGATTAATCATGCAGCAATTTTATACTATGACAACCTATCTGGAGTTTACTTAGCTGAGAATCCAGTCTTCCATGCAAGGACCAAGCATGTGGAGGTACATTATCACTTCATTAGAGAAAAGGTACTTCAAGAGGAAATTGAAATGAAGCCAATAAAGACTGAAGATCAAATTGCAGATATTTTCACGAAAGATCTACCTGCAACCAAGCATACGGAATTTCTGCAACAACTCAGGATGATTGAAAGACCAAGGATAGTTAGTGTTGAGGGGGAGTGTTAA

Coding sequence (CDS)

ATGAGTGACTGTAAGCCAATATCAACACCAATGGAGGTTAACAAAAAGTTCTACATGCATGAAGGCAAAGATCTTGTAGATCCAATAATGTATCGTCAGTTGGTAGGTAGTTTGATCTACCTTACCTTAACAAGACCTGATATCTCATACTCTGTCGCAGTTGTAAGTCGTTACATGCCGAAACCGAAGAAGCCTCAGCTTGAAACAGTTCGGAGAATTTTAAGATATCTCAGAAGAACAACTGAATATGGCCTTTTATATAAGAAAGGGCAAGATTGCAAGTTAGAAGGCTTCTATGATGCTGATTATGCAGAAGATCATGATACACGACGATCAACTACTAGGTACTTGTTTAAACTTGGTTGTGGAGCAGTTTCTTGGTGTAGCAAGAAACAACTAACAGTTGCCTTATCTACCACAGAGGCAGAGTATGGAGCAGCAACCATGGCAGCACAAGAGAATATGTGGATAAAACAACTAATGAAGGATTTGCGCCAAGAGATTAATCATGCAGCAATTTTATACTATGACAACCTATCTGGAGTTTACTTAGCTGAGAATCCAGTCTTCCATGCAAGGACCAAGCATGTGGAGGTACATTATCACTTCATTAGAGAAAAGGTACTTCAAGAGGAAATTGAAATGAAGCCAATAAAGACTGAAGATCAAATTGCAGATATTTTCACGAAAGATCTACCTGCAACCAAGCATACGGAATTTCTGCAACAACTCAGGATGATTGAAAGACCAAGGATAGTTAGTGTTGAGGGGGAGTGTTAA

Protein sequence

MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMPKPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKLGCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLSGVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEFLQQLRMIERPRIVSVEGEC

Homology

[Close]

BLAST of Cmc10g0275031 vs. NCBI nr
Match: XP_016903340.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo] >KAA0037683.1 putative mitochondrial protein [Cucumis melo var. makuwa] >TYK10690.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 418.3 bits (1074), Expect = 4.8e-113
Identity = 217/258 (84.11%), Postives = 222/258 (86.05%), Query Frame = 0


Query: 1   MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
           MSDCKPIST MEVNKKF  HEGKDL +P MY QLVGSLIYLTLTR DISYSV VVS YM 
Sbjct: 135 MSDCKPISTQMEVNKKFCTHEGKDLANPTMYYQLVGSLIYLTLTRLDISYSVRVVSHYMQ 194

Query: 61  KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
           K KKP LE VRRILRYLR  TEYGLLYKK QDCKLEGF DADYA D+DTRRSTT YLFKL
Sbjct: 195 KSKKPHLEAVRRILRYLRGITEYGLLYKKEQDCKLEGFCDADYAGDYDTRRSTTGYLFKL 254

Query: 121 GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLS 180
           GC AVSWCSK+Q  VALSTTEAEY AA M A+ENMWIKQLMKDL QEINHAA LYYDNL 
Sbjct: 255 GCRAVSWCSKRQPIVALSTTEAEYRAAAMTAEENMWIKQLMKDLPQEINHAATLYYDNLY 314

Query: 181 GVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEF 240
            V LA N VFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTK LPATKH +F
Sbjct: 315 AVCLAGNLVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKGLPATKHMKF 374

Query: 241 LQQLRMIERPRIVSVEGE 259
           LQQL MIERP IVSVEGE
Sbjct: 375 LQQLGMIERPMIVSVEGE 392

[Close]

BLAST of Cmc10g0275031 vs. NCBI nr
Match: KAE8705435.1 (hypothetical protein F3Y22_tig00110429pilonHSYRG01243 [Hibiscus syriacus])

HSP 1 Score: 354.8 bits (909), Expect = 6.5e-94
Identity = 178/259 (68.73%), Postives = 206/259 (79.54%), Query Frame = 0


Query: 1    MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
            M +CK  STPME N K   HEGKDL D  MYRQLVGSLIYLTLTRPDISY+V V+SRYM 
Sbjct: 1111 MLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRYMQ 1170

Query: 61   KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
             PKKP LE VRRILRY++ T +YGLLYKKG+DCKL G+ DADYA DHDTRRSTT Y+FKL
Sbjct: 1171 NPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKL 1230

Query: 121  GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLS 180
            G G +SWCSK+Q TV+LSTTEAEY AA MAAQE+ W+ QLM +L Q +++A  LY DN S
Sbjct: 1231 GSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDNQS 1290

Query: 181  GVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEF 240
             + LAENPVFHARTKHVEVHYHF+REKVLQEEIEM+ IKT++QIAD+FTK L   K   F
Sbjct: 1291 AIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFEHF 1350

Query: 241  LQQLRMIERPRIVSVEGEC 260
             +Q  +IER    ++EGEC
Sbjct: 1351 RRQHGVIERME-ANIEGEC 1368

[Close]

BLAST of Cmc10g0275031 vs. NCBI nr
Match: KAE8687058.1 (hypothetical protein F3Y22_tig00111024pilonHSYRG00006 [Hibiscus syriacus])

HSP 1 Score: 354.8 bits (909), Expect = 6.5e-94
Identity = 178/259 (68.73%), Postives = 206/259 (79.54%), Query Frame = 0


Query: 1    MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
            M +CK  STPME N K   HEGKDL D  MYRQLVGSLIYLTLTRPDISY+V V+SRYM 
Sbjct: 1010 MLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRYMQ 1069

Query: 61   KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
             PKKP LE VRRILRY++ T +YGLLYKKG+DCKL G+ DADYA DHDTRRSTT Y+FKL
Sbjct: 1070 NPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKL 1129

Query: 121  GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLS 180
            G G +SWCSK+Q TV+LSTTEAEY AA MAAQE+ W+ QLM +L Q +++A  LY DN S
Sbjct: 1130 GSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDNQS 1189

Query: 181  GVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEF 240
             + LAENPVFHARTKHVEVHYHF+REKVLQEEIEM+ IKT++QIAD+FTK L   K   F
Sbjct: 1190 AIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFEHF 1249

Query: 241  LQQLRMIERPRIVSVEGEC 260
             +Q  +IER    ++EGEC
Sbjct: 1250 RRQHGVIERME-ANIEGEC 1267

[Close]

BLAST of Cmc10g0275031 vs. NCBI nr
Match: KAE8676544.1 (hypothetical protein F3Y22_tig00111584pilonHSYRG00119 [Hibiscus syriacus])

HSP 1 Score: 354.0 bits (907), Expect = 1.1e-93
Identity = 176/259 (67.95%), Postives = 207/259 (79.92%), Query Frame = 0


Query: 1    MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
            M +CK  STPME N K   HEGKDL D  MYRQLVGSLIYLTLTRPDISY+V V+SRYM 
Sbjct: 839  MLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRYMK 898

Query: 61   KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
             PKKP LE VRRILRY++ T +YGLLYKKG+DCKL G+ DADYA DHDTRRSTT Y+FKL
Sbjct: 899  NPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKL 958

Query: 121  GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLS 180
            G G +SWCSK+Q TV+LSTTEAEY AA+M AQE+ W+  LM +L Q +++A +LY DN S
Sbjct: 959  GSGTISWCSKRQPTVSLSTTEAEYRAASMVAQESTWLIHLMNNLHQPVDYAILLYCDNQS 1018

Query: 181  GVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEF 240
             + LAENPVFHARTKHVEVHYHF+REKVLQEEIEMK IKT++QIAD+FTK+L   K   F
Sbjct: 1019 AIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMKQIKTDEQIADLFTKNLSVGKFEHF 1078

Query: 241  LQQLRMIERPRIVSVEGEC 260
             +Q  +I+R    ++EGEC
Sbjct: 1079 RRQHGVIQRME-ANIEGEC 1096

[Close]

BLAST of Cmc10g0275031 vs. NCBI nr
Match: KAE8733549.1 (hypothetical protein F3Y22_tig00001120pilonHSYRG00173 [Hibiscus syriacus])

HSP 1 Score: 353.6 bits (906), Expect = 1.4e-93
Identity = 177/259 (68.34%), Postives = 206/259 (79.54%), Query Frame = 0


Query: 1    MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
            M +CK  STPME N K   HEGKDL D  MYRQLVGSLIYLTLTRPDISY+V V+SRYM 
Sbjct: 1083 MLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRYMQ 1142

Query: 61   KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
             PKKP LE VRRILRY++ T +YGLLYKKG+DCKL G+ DADYA DHDTRRSTT Y+FKL
Sbjct: 1143 NPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKL 1202

Query: 121  GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLS 180
            G G +SWCSK+Q TV+LSTTEAEY AA MAAQE+ W+ QLM +L Q +++A  LY DN S
Sbjct: 1203 GSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDNQS 1262

Query: 181  GVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEF 240
             + LAENPVFHARTKHVEVHYHF+REKVLQEEIEM+ IKT++QIAD+FTK L   K   F
Sbjct: 1263 AIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFEHF 1322

Query: 241  LQQLRMIERPRIVSVEGEC 260
             +Q  +I+R    ++EGEC
Sbjct: 1323 RRQHGVIQRME-ANIEGEC 1340

[Close]

BLAST of Cmc10g0275031 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.6e-50
Identity = 102/250 (40.80%), Postives = 145/250 (58.00%), Query Frame = 0


Query: 1    MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
            M   KP++TPM  + K  +H G  L DP  YR +VGSL YL  TRPD+SY+V  +S+YM 
Sbjct: 1198 MLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMH 1257

Query: 61   KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
             P       ++R+LRYL  T ++G+  KKG    L  + DAD+A D D   ST  Y+  L
Sbjct: 1258 MPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYL 1317

Query: 121  GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLS 180
            G   +SW SKKQ  V  S+TEAEY +    + E  WI  L+ +L  +++H  ++Y DN+ 
Sbjct: 1318 GHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVG 1377

Query: 181  GVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEF 240
              YL  NPVFH+R KH+ + YHFIR +V    + +  + T DQ+AD  TK L       F
Sbjct: 1378 ATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNF 1437

Query: 241  LQQLRMIERP 251
             +++ +I+ P
Sbjct: 1438 SRKIGVIKVP 1447

[Close]

BLAST of Cmc10g0275031 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.0e-49
Identity = 102/250 (40.80%), Postives = 142/250 (56.80%), Query Frame = 0


Query: 1    MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
            M   KP++TPM  + K  ++ G  L DP  YR +VGSL YL  TRPDISY+V  +S++M 
Sbjct: 1215 MITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMH 1274

Query: 61   KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
             P +  L+ ++RILRYL  T  +G+  KKG    L  + DAD+A D D   ST  Y+  L
Sbjct: 1275 MPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYL 1334

Query: 121  GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLS 180
            G   +SW SKKQ  V  S+TEAEY +    + E  WI  L+ +L   +    ++Y DN+ 
Sbjct: 1335 GHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVG 1394

Query: 181  GVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEF 240
              YL  NPVFH+R KH+ + YHFIR +V    + +  + T DQ+AD  TK L  T    F
Sbjct: 1395 ATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNF 1454

Query: 241  LQQLRMIERP 251
              ++ +   P
Sbjct: 1455 ASKIGVTRVP 1464

[Close]

BLAST of Cmc10g0275031 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.4e-43
Identity = 106/243 (43.62%), Postives = 152/243 (62.55%), Query Frame = 0


Query: 1    MSDCKPISTP----MEVNKKF--YMHEGKDLVDPIMYRQLVGSLIY-LTLTRPDISYSVA 60
            M + KP+STP    ++++KK      E K  +  + Y   VGSL+Y +  TRPDI+++V 
Sbjct: 1075 MKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVG 1134

Query: 61   VVSRYMPKPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRST 120
            VVSR++  P K   E V+ ILRYLR TT   L +  G D  L+G+ DAD A D D R+S+
Sbjct: 1135 VVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCF-GGSDPILKGYTDADMAGDIDNRKSS 1194

Query: 121  TRYLFKLGCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAI 180
            T YLF    GA+SW SK Q  VALSTTEAEY AAT   +E +W+K+ +++L        +
Sbjct: 1195 TGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLH-QKEYV 1254

Query: 181  LYYDNLSGVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLP 237
            +Y D+ S + L++N ++HARTKH++V YH+IRE V  E +++  I T +  AD+ TK +P
Sbjct: 1255 VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVP 1314

[Close]

BLAST of Cmc10g0275031 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-39
Identity = 93/253 (36.76%), Postives = 152/253 (60.08%), Query Frame = 0


Query: 1    MSDCKPISTPMEVNKKF-YMHEGKDLVDPIMYRQLVGSLIYLTL-TRPDISYSVAVVSRY 60
            M +C  +STP+     +  ++  +D   P   R L+G L+Y+ L TRPD++ +V ++SRY
Sbjct: 1152 MENCNAVSTPLPSKINYELLNSDEDCNTPC--RSLIGCLMYIMLCTRPDLTTAVNILSRY 1211

Query: 61   MPKPKKPQLETVRRILRYLRRTTEYGLLYKKGQ--DCKLEGFYDADYAEDHDTRRSTTRY 120
              K      + ++R+LRYL+ T +  L++KK    + K+ G+ D+D+A     R+STT Y
Sbjct: 1212 SSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGY 1271

Query: 121  LFKL-GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILY 180
            LFK+     + W +K+Q +VA S+TEAEY A   A +E +W+K L+  +  ++ +   +Y
Sbjct: 1272 LFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIY 1331

Query: 181  YDNLSGVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPAT 240
             DN   + +A NP  H R KH+++ YHF RE+V    I ++ I TE+Q+ADIFTK LPA 
Sbjct: 1332 EDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAA 1391

Query: 241  KHTEFLQQLRMIE 249
            +  E   +L +++
Sbjct: 1392 RFVELRDKLGLLQ 1402

[Close]

BLAST of Cmc10g0275031 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-27
Identity = 66/156 (42.31%), Postives = 95/156 (60.90%), Query Frame = 0


Query: 1   MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
           M DCKP+STP+ +     +   K   DP  +R +VG+L YLTLTRPDISY+V +V + M 
Sbjct: 71  MLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
           +P     + ++R+LRY++ T  +GL   K     ++ F D+D+A    TRRSTT +   L
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 190

Query: 121 GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMW 157
           GC  +SW +K+Q TV+ S+TE EY A  + A E  W
Sbjct: 191 GCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc10g0275031 vs. ExPASy TrEMBL
Match: A0A5A7T3Y0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00570 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.3e-113
Identity = 217/258 (84.11%), Postives = 222/258 (86.05%), Query Frame = 0


Query: 1   MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
           MSDCKPIST MEVNKKF  HEGKDL +P MY QLVGSLIYLTLTR DISYSV VVS YM 
Sbjct: 135 MSDCKPISTQMEVNKKFCTHEGKDLANPTMYYQLVGSLIYLTLTRLDISYSVRVVSHYMQ 194

Query: 61  KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
           K KKP LE VRRILRYLR  TEYGLLYKK QDCKLEGF DADYA D+DTRRSTT YLFKL
Sbjct: 195 KSKKPHLEAVRRILRYLRGITEYGLLYKKEQDCKLEGFCDADYAGDYDTRRSTTGYLFKL 254

Query: 121 GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLS 180
           GC AVSWCSK+Q  VALSTTEAEY AA M A+ENMWIKQLMKDL QEINHAA LYYDNL 
Sbjct: 255 GCRAVSWCSKRQPIVALSTTEAEYRAAAMTAEENMWIKQLMKDLPQEINHAATLYYDNLY 314

Query: 181 GVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEF 240
            V LA N VFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTK LPATKH +F
Sbjct: 315 AVCLAGNLVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKGLPATKHMKF 374

Query: 241 LQQLRMIERPRIVSVEGE 259
           LQQL MIERP IVSVEGE
Sbjct: 375 LQQLGMIERPMIVSVEGE 392

[Close]

BLAST of Cmc10g0275031 vs. ExPASy TrEMBL
Match: A0A1S4E5T6 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107992132 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.3e-113
Identity = 217/258 (84.11%), Postives = 222/258 (86.05%), Query Frame = 0


Query: 1   MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
           MSDCKPIST MEVNKKF  HEGKDL +P MY QLVGSLIYLTLTR DISYSV VVS YM 
Sbjct: 135 MSDCKPISTQMEVNKKFCTHEGKDLANPTMYYQLVGSLIYLTLTRLDISYSVRVVSHYMQ 194

Query: 61  KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
           K KKP LE VRRILRYLR  TEYGLLYKK QDCKLEGF DADYA D+DTRRSTT YLFKL
Sbjct: 195 KSKKPHLEAVRRILRYLRGITEYGLLYKKEQDCKLEGFCDADYAGDYDTRRSTTGYLFKL 254

Query: 121 GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLS 180
           GC AVSWCSK+Q  VALSTTEAEY AA M A+ENMWIKQLMKDL QEINHAA LYYDNL 
Sbjct: 255 GCRAVSWCSKRQPIVALSTTEAEYRAAAMTAEENMWIKQLMKDLPQEINHAATLYYDNLY 314

Query: 181 GVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEF 240
            V LA N VFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTK LPATKH +F
Sbjct: 315 AVCLAGNLVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKGLPATKHMKF 374

Query: 241 LQQLRMIERPRIVSVEGE 259
           LQQL MIERP IVSVEGE
Sbjct: 375 LQQLGMIERPMIVSVEGE 392

[Close]

BLAST of Cmc10g0275031 vs. ExPASy TrEMBL
Match: A0A6A3AQC6 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110429pilonHSYRG01243 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.1e-94
Identity = 178/259 (68.73%), Postives = 206/259 (79.54%), Query Frame = 0


Query: 1    MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
            M +CK  STPME N K   HEGKDL D  MYRQLVGSLIYLTLTRPDISY+V V+SRYM 
Sbjct: 1111 MLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRYMQ 1170

Query: 61   KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
             PKKP LE VRRILRY++ T +YGLLYKKG+DCKL G+ DADYA DHDTRRSTT Y+FKL
Sbjct: 1171 NPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKL 1230

Query: 121  GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLS 180
            G G +SWCSK+Q TV+LSTTEAEY AA MAAQE+ W+ QLM +L Q +++A  LY DN S
Sbjct: 1231 GSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDNQS 1290

Query: 181  GVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEF 240
             + LAENPVFHARTKHVEVHYHF+REKVLQEEIEM+ IKT++QIAD+FTK L   K   F
Sbjct: 1291 AIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFEHF 1350

Query: 241  LQQLRMIERPRIVSVEGEC 260
             +Q  +IER    ++EGEC
Sbjct: 1351 RRQHGVIERME-ANIEGEC 1368

[Close]

BLAST of Cmc10g0275031 vs. ExPASy TrEMBL
Match: A0A6A2Z579 (Integrase catalytic domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111024pilonHSYRG00006 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.1e-94
Identity = 178/259 (68.73%), Postives = 206/259 (79.54%), Query Frame = 0


Query: 1    MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
            M +CK  STPME N K   HEGKDL D  MYRQLVGSLIYLTLTRPDISY+V V+SRYM 
Sbjct: 1010 MLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRYMQ 1069

Query: 61   KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
             PKKP LE VRRILRY++ T +YGLLYKKG+DCKL G+ DADYA DHDTRRSTT Y+FKL
Sbjct: 1070 NPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKL 1129

Query: 121  GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLS 180
            G G +SWCSK+Q TV+LSTTEAEY AA MAAQE+ W+ QLM +L Q +++A  LY DN S
Sbjct: 1130 GSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDNQS 1189

Query: 181  GVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEF 240
             + LAENPVFHARTKHVEVHYHF+REKVLQEEIEM+ IKT++QIAD+FTK L   K   F
Sbjct: 1190 AIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFEHF 1249

Query: 241  LQQLRMIERPRIVSVEGEC 260
             +Q  +IER    ++EGEC
Sbjct: 1250 RRQHGVIERME-ANIEGEC 1267

[Close]

BLAST of Cmc10g0275031 vs. ExPASy TrEMBL
Match: A0A6A2YJJ8 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111584pilonHSYRG00119 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 5.4e-94
Identity = 176/259 (67.95%), Postives = 207/259 (79.92%), Query Frame = 0


Query: 1    MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
            M +CK  STPME N K   HEGKDL D  MYRQLVGSLIYLTLTRPDISY+V V+SRYM 
Sbjct: 839  MLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRYMK 898

Query: 61   KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
             PKKP LE VRRILRY++ T +YGLLYKKG+DCKL G+ DADYA DHDTRRSTT Y+FKL
Sbjct: 899  NPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVFKL 958

Query: 121  GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLS 180
            G G +SWCSK+Q TV+LSTTEAEY AA+M AQE+ W+  LM +L Q +++A +LY DN S
Sbjct: 959  GSGTISWCSKRQPTVSLSTTEAEYRAASMVAQESTWLIHLMNNLHQPVDYAILLYCDNQS 1018

Query: 181  GVYLAENPVFHARTKHVEVHYHFIREKVLQEEIEMKPIKTEDQIADIFTKDLPATKHTEF 240
             + LAENPVFHARTKHVEVHYHF+REKVLQEEIEMK IKT++QIAD+FTK+L   K   F
Sbjct: 1019 AIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMKQIKTDEQIADLFTKNLSVGKFEHF 1078

Query: 241  LQQLRMIERPRIVSVEGEC 260
             +Q  +I+R    ++EGEC
Sbjct: 1079 RRQHGVIQRME-ANIEGEC 1096

[Close]

BLAST of Cmc10g0275031 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 166.8 bits (421), Expect = 2.3e-41
Identity = 83/204 (40.69%), Postives = 122/204 (59.80%), Query Frame = 0


Query: 4   CKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMPKPK 63
           CKP S PM+ +  F  H G D VD   YR+L+G L+YL +TR DIS++V  +S++   P+
Sbjct: 351 CKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPR 410

Query: 64  KPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKLGCG 123
               + V +IL Y++ T   GL Y    + +L+ F DA +    DTRRST  Y   LG  
Sbjct: 411 LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTS 470

Query: 124 AVSWCSKKQLTVALSTTEAEYGAATMAAQENMWIKQLMKDLRQEINHAAILYYDNLSGVY 183
            +SW SKKQ  V+ S+ EAEY A + A  E MW+ Q  ++L+  ++   +L+ DN + ++
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIH 530

Query: 184 LAENPVFHARTKHVEVHYHFIREK 208
           +A N VFH RTKH+E   H +RE+
Sbjct: 531 IATNAVFHERTKHIESDCHSVRER 554

[Close]

BLAST of Cmc10g0275031 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 7.8e-29
Identity = 66/156 (42.31%), Postives = 95/156 (60.90%), Query Frame = 0


Query: 1   MSDCKPISTPMEVNKKFYMHEGKDLVDPIMYRQLVGSLIYLTLTRPDISYSVAVVSRYMP 60
           M DCKP+STP+ +     +   K   DP  +R +VG+L YLTLTRPDISY+V +V + M 
Sbjct: 71  MLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  KPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGFYDADYAEDHDTRRSTTRYLFKL 120
           +P     + ++R+LRY++ T  +GL   K     ++ F D+D+A    TRRSTT +   L
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 190

Query: 121 GCGAVSWCSKKQLTVALSTTEAEYGAATMAAQENMW 157
           GC  +SW +K+Q TV+ S+TE EY A  + A E  W
Sbjct: 191 GCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc10g0275031 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.6e-10
Identity = 29/78 (37.18%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 39  IYLTLTRPDISYSVAVVSRYMPKPKKPQLETVRRILRYLRRTTEYGLLYKKGQDCKLEGF 98
           +YLT+TRPD++++V  +S++    +  Q++ V ++L Y++ T   GL Y    D +L+ F
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 99  YDADYAEDHDTRRSTTRY 117
            D+D+A   DTRRS T +
Sbjct: 61  ADSDWASCPDTRRSVTGF 78

The following BLAST results are available for this feature:

BLAST of Cmc10g0275031 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903340.1	4.8e-113	84.11	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo] >...	[more]
KAE8705435.1	6.5e-94	68.73	hypothetical protein F3Y22_tig00110429pilonHSYRG01243 [Hibiscus syriacus]	[more]
KAE8687058.1	6.5e-94	68.73	hypothetical protein F3Y22_tig00111024pilonHSYRG00006 [Hibiscus syriacus]	[more]
KAE8676544.1	1.1e-93	67.95	hypothetical protein F3Y22_tig00111584pilonHSYRG00119 [Hibiscus syriacus]	[more]
KAE8733549.1	1.4e-93	68.34	hypothetical protein F3Y22_tig00001120pilonHSYRG00173 [Hibiscus syriacus]	[more]

BLAST of Cmc10g0275031 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	4.6e-50	40.80	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	3.0e-49	40.80	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P10978	5.4e-43	43.62	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.6e-39	36.76	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	1.1e-27	42.31	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc10g0275031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3Y0	2.3e-113	84.11	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S4E5T6	2.3e-113	84.11	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6A3AQC6	3.1e-94	68.73	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110429pilon...	[more]
A0A6A2Z579	3.1e-94	68.73	Integrase catalytic domain-containing protein OS=Hibiscus syriacus OX=106335 GN=...	[more]
A0A6A2YJJ8	5.4e-94	67.95	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]

BLAST of Cmc10g0275031 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.3e-41	40.69	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	7.8e-29	42.31	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	3.6e-10	37.18	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF343	SUBFAMILY NOT NAMED	coord: 117..246
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 117..246
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 96..234 e-value: 2.06565E-74 score: 221.188
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 28..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0275031.1	Cmc10g0275031.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding