Cmc08g0236161.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc08g0236161.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Clathrin light chain
Location	CMiso1.1chr08: 32482025 .. 32485472 (-)
Sequence length	1489
RNA-Seq Expression	Cmc08g0236161.1
Synteny	Cmc08g0236161.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGGAGGTTTCTGTAGCGGAAGACTAACGCCGTCTAACTCTTTTTTCCATTTCTTATAATAACGACCGGAAACGGTCGCCAAGCAGCAGAGAAACATTCGCGCGGAAAGATTGATCGGCTGTTGACCGTCGCCGGAGGAAGAAGCAGAATACTCCGACGCCATGTCAACCTTCGCCGGAACGTCTCCTCCTCCGTTCGAAGATGCCACCATCGGATTCGAACCTCGCCTCGCTTCTCAAAGATTTGAAACCTTTTCAACTTTACAAGCCGAGTCCGCCGACGACTCCTCACCGATCTTCGGAAATCTGCCCTACGACCTGGGAGACGACCTTCCGCCGACTCCGCCTACTAATTTCTCGGCGGTTGGAGGATTCTCGAGTTTCTCGTCGCAGCAGAACGGGAAGGGTTTCGATGGAGGTTTTGGCGAATCGGACGGCCCGATCCTCTCGTCGCCGACGGCGATGGAACCGGAGGAAGGATTTCCTTTGAGAGAGTGGCGGAGGTGAGAAAACTGTTGAAATTCTTTGGGATTGTCCGATTGTTGGTACAAGTTTTTTTTTAATCTAAATCTGGTAGTTGTTAGCTCTTACTGAGATCATTAAATCCTTGTGTTTATGAACTGAATTAAATTTTTGCTATCATCCGATGGATGAACTATGCGTAATTTTTGTGCATTCAAGAAATTCTATTCCTCTTTTACTTACTGCTTTTGTGTCAAAAGCTTACCTCTCTGGTTGATAATCATTCGGGTCGTTTTTGGTTTTGAAAATTGTTTGGTCTACTTGAAAGAGTTGAATCCACAGTCTGATTCTAAAAATAAAAACAGATATCGAGAAACTATTTTTCTTCGAAACTTAGCTGGATTTTTTAAAATACGTTCATAAATTGAGCGCCTTTGTAGATTTAATTTTTTAAAATCTAAGAATGATATATTTAACTTTTAGTTTTTGGATTCCGAAAATTGTACTTACTTTCCTAGAACTTTTTTTTACGGTAGTTTTCATCTTTTTGAACTAAACACTAGAATTCTTAGTAAAATTTCAAAACTGCAATCGAGTTTTAAAAACAACTTTTTCCAATTTTCAAAATTTTGGTTTGGTTTTTTGAAACATTGCCAAATGTGGATAAAAAACTAAAGAAATCAACAAATTTTGAAGTAGCATTTTTATATTTAATTTTCAAAGACCAAAAATCAAATGATTATCAAATAAATCTTAAGATTTCTTTGAATTAATTTTCTAAAGTTCTTAAAATCTATTTTTTATACTTAAAAGTTTAATCACTTAAAGAGTTAATCCAAACAATCCATATGTTCTTTAATATTACAGTGGTTCTGTTCTAATAAGTTACCACTGAATCTAAATACTTGAGTTAATGGGTTAGGTTAAATTAGTTACCGCTAAATCTAAATGCTTAAGTTGATGGGTTAGGATAAATTTAATTATATAATACTTTAACGTGTATCCTAGCTGTGAATGGCAGATTGAATGCAATTCGATTGGAAGAAAAGGAGAAGAAAGAAAAAGAGCTGTTGGAAGAGATAATTGATGAGGCTGATCAGTATAAAATTGAATTCTACAGAAGGCGAAAGCTTGCTCTTGATCATAGCAAAGCTACTAATAGGGATAAGGAGAAGGTGAGAATGTCTAAACTCATTCAATTTCTTCCATTATAAACTGAAAACTTCACTTTATCTTCTTTAAACATAGAATGAAGAGACATAAACTAACGTGGTTCTGTGGAATGTTGAGTGATTTGGCTTCTGAATCTGTATTAATGGTTGTTGAAGTGAATGTTGAAATGAAGTATGCTGCCTTCTTTAGATTCTAAGCTTTCTTGTGGTTGAGATTGCAATTTTAGGCCAAATGCAAAAAGTACTCCCGAGCTATGCCTTCTAATAATCTTTCAAAAGTTGCAATATTATTCTTAACCTTTTATAAATGCTTTGAAGCTATCTTTTATAAATGTTTCAAAACTGTCTTTCGAGTTGAAAACTTTTAGATTTTGTTTCTGTTGAGGTTGAAAACTGAAATAGGTGTGTTGGTGACTTGGAAAGATGTGGGGTATTGATCATCGTTCCAAGTTCCAATTTTCAATCAATAGTCTAAAGATTTCTATTCCAAATGAAAGGACAAGGATAATGTTTAAACTTTCAAAAGAATATGGACATTTTTGTAAACGAAAGACAGTTTTTCAATATTTCTTTCATAATCTAGCCTAGATCTTTAACTCTACGATATGTTCTCAACACTCCCTCATGCGCACACAATTGGATGTTGATTTGATTGATGAGGCCCGTCATTTGACTCTCAATATCAAATGGGATAAATAATTAGACATTTGAACTCAAGATTTGCTTTTCTGGTATCGTAGTTAAATCAGTACTAGGTCCAAAGAGTCTAAGAAAATGAGGATATTAACATTGAGGTTTTACCATATCAAATGTATTTATGTTGCCATTTGAGCCCAATATTTGTTAGAATCCGTCTTATTGGAAAACAAGTAGGCTCATTAAAGCAAAAGGTAAAACCATTGGATTCTAACCTTTTCTTATTTGTAATTATTTTTCTCTCTTGTTCATAAAATCTTACCACAATTTGATCTTAAAATGACAGCAATATCTAGCAAACCAAGAGAAGTTCCATGCTGAAGCTGATAAGAACTATTGGAAGGCAATTGCAGAACTAATCCCCAATGAGGTACCAACCATTGAACAAAGGGGAAAGAAAGACAAGGAAGAGAAGCCTGCTATTATTGTCATTCAAGGTCCGAAGCCCGGGAAGCCAACCGATCTCTCGAGAATGCGTCAAATACATTTGAAACTCAAACACAATACCCCTCTTCACATGAAGCCTAAACCCCCACCAGCAGAACCTAAATCCGAATCGAAAAAGGATTCTTCTGCTGCTGGGGCAACTCTCGCTGCAGGTTCGGGTTTGGCAGCTTCAAGAACTGCTGCTGTTGCTACTTCTGAGGGTACAACTGTTGGCTGAAATTGGCTGGTATATATATTTTATACTCACTGTTTTGGATGTTTAGGGAAAAAAAAAACTAGCAATGAGTCATGGATTTTGATGTTTAATAATAGTAAGTTATAGTAAATATTAAATAAATCACTTGAGAAATCGAGCAATATACGTAGGTAAAGCCATAAAAAAGATACAAAAATCCTAACGAGGGCTTTGGTTCTGGTGGATATTTTATGGTTTTGACTGCTTAAGTTTTTGTTGTTTTGTGAATATTTATGATGTTTTTGTGATATACAACCCAATGGGGTAGTTTTTAGTGCATTTGTAAATATCGTAGAAGTTGGAAGTTGGAAGATTTATGAGATAGAGACGAGTCATTTTGATGTGTCTTTGTTTTGGCTTAAAATTTTTTAATATTAGAAATCATGTTCATTTACTAACATTTCTTGTTCTTTTTTGACCTTAACCAAAATTGCA

mRNA sequence

TTTTGGAGGTTTCTGTAGCGGAAGACTAACGCCGTCTAACTCTTTTTTCCATTTCTTATAATAACGACCGGAAACGGTCGCCAAGCAGCAGAGAAACATTCGCGCGGAAAGATTGATCGGCTGTTGACCGTCGCCGGAGGAAGAAGCAGAATACTCCGACGCCATGTCAACCTTCGCCGGAACGTCTCCTCCTCCGTTCGAAGATGCCACCATCGGATTCGAACCTCGCCTCGCTTCTCAAAGATTTGAAACCTTTTCAACTTTACAAGCCGAGTCCGCCGACGACTCCTCACCGATCTTCGGAAATCTGCCCTACGACCTGGGAGACGACCTTCCGCCGACTCCGCCTACTAATTTCTCGGCGGTTGGAGGATTCTCGAGTTTCTCGTCGCAGCAGAACGGGAAGGGTTTCGATGGAGGTTTTGGCGAATCGGACGGCCCGATCCTCTCGTCGCCGACGGCGATGGAACCGGAGGAAGGATTTCCTTTGAGAGAGTGGCGGAGATTGAATGCAATTCGATTGGAAGAAAAGGAGAAGAAAGAAAAAGAGCTGTTGGAAGAGATAATTGATGAGGCTGATCAGTATAAAATTGAATTCTACAGAAGGCGAAAGCTTGCTCTTGATCATAGCAAAGCTACTAATAGGGATAAGGAGAAGCAATATCTAGCAAACCAAGAGAAGTTCCATGCTGAAGCTGATAAGAACTATTGGAAGGCAATTGCAGAACTAATCCCCAATGAGGTACCAACCATTGAACAAAGGGGAAAGAAAGACAAGGAAGAGAAGCCTGCTATTATTGTCATTCAAGGTCCGAAGCCCGGGAAGCCAACCGATCTCTCGAGAATGCGTCAAATACATTTGAAACTCAAACACAATACCCCTCTTCACATGAAGCCTAAACCCCCACCAGCAGAACCTAAATCCGAATCGAAAAAGGATTCTTCTGCTGCTGGGGCAACTCTCGCTGCAGGTTCGGGTTTGGCAGCTTCAAGAACTGCTGCTGTTGCTACTTCTGAGGGTACAACTGTTGGCTGAAATTGGCTGGTATATATATTTTATACTCACTGTTTTGGATGTTTAGGGAAAAAAAAAACTAGCAATGAGTCATGGATTTTGATGTTTAATAATAGTAAGTTATAGTAAATATTAAATAAATCACTTGAGAAATCGAGCAATATACGTAGGTAAAGCCATAAAAAAGATACAAAAATCCTAACGAGGGCTTTGGTTCTGGTGGATATTTTATGGTTTTGACTGCTTAAGTTTTTGTTGTTTTGTGAATATTTATGATGTTTTTGTGATATACAACCCAATGGGGTAGTTTTTAGTGCATTTGTAAATATCGTAGAAGTTGGAAGTTGGAAGATTTATGAGATAGAGACGAGTCATTTTGATGTGTCTTTGTTTTGGCTTAAAATTTTTTAATATTAGAAATCATGTTCATTTACTAACATTTCTTGTTCTTTTTTGACCTTAACCAAAATTGCA

Coding sequence (CDS)

ATGTCAACCTTCGCCGGAACGTCTCCTCCTCCGTTCGAAGATGCCACCATCGGATTCGAACCTCGCCTCGCTTCTCAAAGATTTGAAACCTTTTCAACTTTACAAGCCGAGTCCGCCGACGACTCCTCACCGATCTTCGGAAATCTGCCCTACGACCTGGGAGACGACCTTCCGCCGACTCCGCCTACTAATTTCTCGGCGGTTGGAGGATTCTCGAGTTTCTCGTCGCAGCAGAACGGGAAGGGTTTCGATGGAGGTTTTGGCGAATCGGACGGCCCGATCCTCTCGTCGCCGACGGCGATGGAACCGGAGGAAGGATTTCCTTTGAGAGAGTGGCGGAGATTGAATGCAATTCGATTGGAAGAAAAGGAGAAGAAAGAAAAAGAGCTGTTGGAAGAGATAATTGATGAGGCTGATCAGTATAAAATTGAATTCTACAGAAGGCGAAAGCTTGCTCTTGATCATAGCAAAGCTACTAATAGGGATAAGGAGAAGCAATATCTAGCAAACCAAGAGAAGTTCCATGCTGAAGCTGATAAGAACTATTGGAAGGCAATTGCAGAACTAATCCCCAATGAGGTACCAACCATTGAACAAAGGGGAAAGAAAGACAAGGAAGAGAAGCCTGCTATTATTGTCATTCAAGGTCCGAAGCCCGGGAAGCCAACCGATCTCTCGAGAATGCGTCAAATACATTTGAAACTCAAACACAATACCCCTCTTCACATGAAGCCTAAACCCCCACCAGCAGAACCTAAATCCGAATCGAAAAAGGATTCTTCTGCTGCTGGGGCAACTCTCGCTGCAGGTTCGGGTTTGGCAGCTTCAAGAACTGCTGCTGTTGCTACTTCTGAGGGTACAACTGTTGGCTGA

Protein sequence

MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTLQAESADDSSPIFGNLPYDLGDDLPPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEEKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG

Homology

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BLAST of Cmc08g0236161.1 vs. NCBI nr
Match: XP_008449287.1 (PREDICTED: clathrin light chain 2-like [Cucumis melo] >KAA0045034.1 clathrin light chain 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 552.7 bits (1423), Expect = 1.8e-153
Identity = 287/290 (98.97%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTLQAESADDSSPIFGNLPYDLGDDLPPT 60
           MSTFAGTSPPPFEDATIGF+PRLASQRFETFST QAESADDSSPIFGNLPYDLGDDLPPT
Sbjct: 1   MSTFAGTSPPPFEDATIGFDPRLASQRFETFSTFQAESADDSSPIFGNLPYDLGDDLPPT 60

Query: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEEKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKE+KPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 291
           LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG
Sbjct: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of Cmc08g0236161.1 vs. NCBI nr
Match: TYJ96292.1 (clathrin light chain 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 552.4 bits (1422), Expect = 2.4e-153
Identity = 287/290 (98.97%), Postives = 288/290 (99.31%), Query Frame = 0


Query: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTLQAESADDSSPIFGNLPYDLGDDLPPT 60
           MSTFAGTSPPPFEDATIGFEPRLASQRFETFST QAESADDSSPIFGNLPYDLGDDLPPT
Sbjct: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTFQAESADDSSPIFGNLPYDLGDDLPPT 60

Query: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEEKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKE+KPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 291
           LHMKPKPPPAEPKSESKKDSSAAGATL AGSGLAASRTAAVATSEGTTVG
Sbjct: 241 LHMKPKPPPAEPKSESKKDSSAAGATLTAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of Cmc08g0236161.1 vs. NCBI nr
Match: XP_004147885.1 (clathrin light chain 2 [Cucumis sativus] >KGN54369.1 hypothetical protein Csa_018069 [Cucumis sativus])

HSP 1 Score: 522.3 bits (1344), Expect = 2.6e-144
Identity = 272/290 (93.79%), Postives = 279/290 (96.21%), Query Frame = 0


Query: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTLQAESADDSSPIFGNLPYDLGDDLPPT 60
           MSTFAGT P PF+DAT GFEPRLASQRFETFST +AESADDSSPIFGNLPYD GD + PT
Sbjct: 1   MSTFAGTPPSPFDDATNGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT 60

Query: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSA GGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEK+E ELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEEKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKE+KPAI+VIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 291
           LHMKPKPPPAEPK+ESKKDSSAAGATLAAGSG AASRTAAVATSEG TVG
Sbjct: 241 LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 290

[Close]

BLAST of Cmc08g0236161.1 vs. NCBI nr
Match: XP_038882671.1 (clathrin light chain 2-like [Benincasa hispida] >XP_038882672.1 clathrin light chain 2-like [Benincasa hispida])

HSP 1 Score: 489.2 bits (1258), Expect = 2.5e-134
Identity = 260/297 (87.54%), Postives = 272/297 (91.58%), Query Frame = 0


Query: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTLQ----AESADDSSPIFGNLPYDLGDD 60
           MSTFAGT PP F+D TIGFEPRLASQRFETFST +    A+SA DSSPIFGN+ Y+ GDD
Sbjct: 1   MSTFAGTPPPSFDDGTIGFEPRLASQRFETFSTFETESAADSAGDSSPIFGNMAYNQGDD 60

Query: 61  LPPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120
           L PTPPTNFSA GGFSSFS QQNGKGFDGG+GESDGPILSSPTAMEPEEGFPLREWRRLN
Sbjct: 61  LSPTPPTNFSADGGFSSFSPQQNGKGFDGGYGESDGPILSSPTAMEPEEGFPLREWRRLN 120

Query: 121 AIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHA 180
           AIRLEEK K+EKELLEEIIDEADQYKIEFYRRRKLALD++K +NRDKEKQYLANQEKFHA
Sbjct: 121 AIRLEEKLKREKELLEEIIDEADQYKIEFYRRRKLALDNTKTSNRDKEKQYLANQEKFHA 180

Query: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEEKPAIIVIQGPKPGKPTDLSRMRQIHLKLK 240
           EADKNYWKAIAELIPNEVPTIEQRGKKDKE+KPAI+VIQGPKPGKPTDLSRMRQI LKLK
Sbjct: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIQLKLK 240

Query: 241 HNTPLHMKPK---PPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 291
           HNTPLHMKPK   PPP EPKSESKKDSSAAG T AAGSGLA SRTAAVATSEGTT G
Sbjct: 241 HNTPLHMKPKQPPPPPVEPKSESKKDSSAAGMTSAAGSGLATSRTAAVATSEGTTFG 297

[Close]

BLAST of Cmc08g0236161.1 vs. NCBI nr
Match: XP_022151477.1 (clathrin light chain 2-like [Momordica charantia])

HSP 1 Score: 414.8 bits (1065), Expect = 5.9e-112
Identity = 228/306 (74.51%), Postives = 260/306 (84.97%), Query Frame = 0


Query: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTLQAE----SADDSSPIFGNLPYDLGDD 60
           MSTFAG +PPPF+D T G++PRL+SQRFE+FS  +AE    SA DSSPIFG+   + GDD
Sbjct: 1   MSTFAG-APPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60

Query: 61  L--------PPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFP 120
           L         P+PP+NFS  GGFS+FS +QNGKGFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYL 180
           LREWRRLNAIRLEEKEK+EKELL+EIIDEADQYKI+FYRRRKLALD++KA+NRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180

Query: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEEKPAIIVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKE+KPAI+VIQGPKPGKPTDLSRM
Sbjct: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMKPKPPP-AEPKSESKKDSS----AAGATLAAGSGLAASRT---AA 287
           RQIHLKLK NTPLHM+PKPPP +E K++ K+DSS    AAGA+   GSG ++S T   AA
Sbjct: 241 RQIHLKLKRNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPKAAA 300

[Close]

BLAST of Cmc08g0236161.1 vs. ExPASy Swiss-Prot
Match: O04209 (Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.1e-55
Identity = 116/192 (60.42%), Postives = 150/192 (78.12%), Query Frame = 0


Query: 72  SSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKKEKELL 131
           S + +  NG G  G  G+ DGPIL  P+ ME +EGF LREWRR NAI+LEEKEK+EKELL
Sbjct: 54  SDYGAYSNGDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELL 113

Query: 132 EEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIP 191
           ++II+EADQYK EF+++ ++  +++KA NR+KEK YL NQEKF+AE+ KNYWKAIAEL+P
Sbjct: 114 KQIIEEADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVP 173

Query: 192 NEVPTIE-QRGKKDKEE--KPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMK-PKP 251
            EVPTIE +RGKK++++  KP + VIQGPKPGKPTDL+RMRQI +KLKHN P H+K    
Sbjct: 174 KEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLTSQ 233

Query: 252 PPAEPKSESKKD 260
           PP+E  +   K+
Sbjct: 234 PPSEEAAAPPKN 245

[Close]

BLAST of Cmc08g0236161.1 vs. ExPASy Swiss-Prot
Match: F4J5M9 (Clathrin light chain 3 OS=Arabidopsis thaliana OX=3702 GN=At3g51890 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.2e-52
Identity = 106/162 (65.43%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 87  FGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKKEKELLEEIIDEADQYKIEFY 146
           F +++  IL  P+AME EEGF LREWRRLNA+RLEEKEK+EKE++++I++ A+QYK EFY
Sbjct: 78  FDDTNDSILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILEAAEQYKAEFY 137

Query: 147 RRRKLALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKE 206
            +R + ++++K  NR+KEK +L NQEKF+AEADKN WKAIAELIP EVP IE RG K K 
Sbjct: 138 SKRNVTIENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPREVPVIENRGNKKK- 197

Query: 207 EKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPP 249
               I VIQGPKPGKPTDLSRMRQ+  KLKHN P HMKPK P
Sbjct: 198 -TATITVIQGPKPGKPTDLSRMRQVLTKLKHNPPTHMKPKLP 237

[Close]

BLAST of Cmc08g0236161.1 vs. ExPASy Swiss-Prot
Match: Q9SKU1 (Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 7.2e-52
Identity = 120/204 (58.82%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 60  TPPTNFSAVGGFSSFSSQQNGKGFDGGFG-----ESDGPILSSPTAMEPEEGFPLREWRR 119
           +P  +FS+   F S  +  NG G  GG G      SDGPIL  P  M  EEGF  REWRR
Sbjct: 62  SPNHDFSS--PFESSVNDANGNG--GGSGGDAIFASDGPILPDPNEMR-EEGFQRREWRR 121

Query: 120 LNAIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKF 179
           LN I LEEKEKKEKE+  +II EA+ +K  FY +R   ++ +K  NR+KEK Y ANQEKF
Sbjct: 122 LNTIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYWANQEKF 181

Query: 180 HAEADKNYWKAIAELIPNEVPTIE-QRGKKDKEEKPAIIVIQGPKPGKPTDLSRMRQIHL 239
           H E DK+YWKAIAELIP EVP IE +RGKKD ++KP++ VIQGPKPGKPTDL RMRQI L
Sbjct: 182 HKEVDKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQIFL 241

Query: 240 KLKHNTPLHMKPKPPPAEPKSESK 258
           KLK N P HM P PPPA+   + K
Sbjct: 242 KLKTNPPPHMMPPPPPAKDAKDGK 260

[Close]

BLAST of Cmc08g0236161.1 vs. ExPASy Swiss-Prot
Match: Q5Z402 (Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 7.9e-51
Identity = 129/240 (53.75%), Postives = 156/240 (65.00%), Query Frame = 0


Query: 55  DDLPPTP-PTNFSAVGGFSSFSSQQNGKGFDGGFGESD---GPILSSPTAMEPEEGFPLR 114
           D  PP+P P  F           + NG   D  F   D   GP+L  P  M  +EGF LR
Sbjct: 36  DAFPPSPEPYAFRPDAPSPFGMPEANGSLHDDPFAAPDNDNGPVLPPPNQMGADEGFLLR 95

Query: 115 EWRRLNAIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLAN 174
           EWRR NAI LEEKEKKEKE+  +II +A ++K  F  +RKL ++ SK  NR++EK YLAN
Sbjct: 96  EWRRQNAILLEEKEKKEKEMRNQIILDAKEFKKAFVEKRKLNVETSKDQNREREKLYLAN 155

Query: 175 QEKFHAEADKNYWKAIAELIPNEVPTIEQRG---KKDKEEKPAIIVIQGPKPGKPTDLSR 234
           QEKFHA ADK YWKAI+ELIP+E+  IE+RG    KDKE+KP I+VIQGPKPGKPTD+SR
Sbjct: 156 QEKFHAGADKQYWKAISELIPHEIANIEKRGAKKDKDKEKKPGIVVIQGPKPGKPTDMSR 215

Query: 235 MRQIHLKLKHNTPLHMKPKPPPAEPKSESKKDSSAA--GATLAAGSGLAASRTAAVATSE 286
           MRQI LKLKH  P HMKP PPPA   + + KD +A   GA +AA +   AS   +V   E
Sbjct: 216 MRQILLKLKHTPPPHMKPPPPPA---AATGKDGAAGKDGAKVAAAASKDASANGSVPEME 272

[Close]

BLAST of Cmc08g0236161.1 vs. ExPASy Swiss-Prot
Match: Q7XKE9 (Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.3e-49
Identity = 125/267 (46.82%), Postives = 158/267 (59.18%), Query Frame = 0


Query: 36  AESADDSSPIFGNLPYDLGDDLPPTPPTNFSA----VGGFSSF---------------SS 95
           A+   D  P   + P+D  DD  P      +A     GG++SF               + 
Sbjct: 6   ADDGADELPRTASHPFDADDDAAPDASGGAAADDTGYGGYASFVDGGVEDVEEEEEEIAV 65

Query: 96  QQNGKGF---DGGFGES-----------DGPILSSPTAMEPEEGFPLREWRRLNAIRLEE 155
           +  G       GGF  S           DGPIL  P  M  EEG  LREWRR NAI LEE
Sbjct: 66  ESEGVPIGHVSGGFSPSPFSPDPELDGGDGPILPPPAQMGAEEGILLREWRRQNAIVLEE 125

Query: 156 KEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADKNY 215
           KE+KEKEL  +I+ EA+++K  FY +R    + +K  NR++EK ++A QEKFHAEADK Y
Sbjct: 126 KERKEKELRAQILAEAEEFKKAFYEKRIQNCETNKVHNREREKIFVAGQEKFHAEADKQY 185

Query: 216 WKAIAELIPNEVPTIEQRGKKDKEEKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTPLH 270
           WK+I+ELIP+E+ TIE+RGKKDK++KP+I VIQGPKPGKPTDLSRMRQI +KLKH  P H
Sbjct: 186 WKSISELIPHEIATIEKRGKKDKDKKPSITVIQGPKPGKPTDLSRMRQILVKLKHAPPPH 245

[Close]

BLAST of Cmc08g0236161.1 vs. ExPASy TrEMBL
Match: A0A5A7TPG9 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00190 PE=3 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 8.8e-154
Identity = 287/290 (98.97%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTLQAESADDSSPIFGNLPYDLGDDLPPT 60
           MSTFAGTSPPPFEDATIGF+PRLASQRFETFST QAESADDSSPIFGNLPYDLGDDLPPT
Sbjct: 1   MSTFAGTSPPPFEDATIGFDPRLASQRFETFSTFQAESADDSSPIFGNLPYDLGDDLPPT 60

Query: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEEKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKE+KPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 291
           LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG
Sbjct: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of Cmc08g0236161.1 vs. ExPASy TrEMBL
Match: A0A1S3BLP9 (Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103491206 PE=3 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 8.8e-154
Identity = 287/290 (98.97%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTLQAESADDSSPIFGNLPYDLGDDLPPT 60
           MSTFAGTSPPPFEDATIGF+PRLASQRFETFST QAESADDSSPIFGNLPYDLGDDLPPT
Sbjct: 1   MSTFAGTSPPPFEDATIGFDPRLASQRFETFSTFQAESADDSSPIFGNLPYDLGDDLPPT 60

Query: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEEKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKE+KPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 291
           LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG
Sbjct: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of Cmc08g0236161.1 vs. ExPASy TrEMBL
Match: A0A5D3B8W6 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00900 PE=3 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.2e-153
Identity = 287/290 (98.97%), Postives = 288/290 (99.31%), Query Frame = 0


Query: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTLQAESADDSSPIFGNLPYDLGDDLPPT 60
           MSTFAGTSPPPFEDATIGFEPRLASQRFETFST QAESADDSSPIFGNLPYDLGDDLPPT
Sbjct: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTFQAESADDSSPIFGNLPYDLGDDLPPT 60

Query: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEEKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKE+KPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 291
           LHMKPKPPPAEPKSESKKDSSAAGATL AGSGLAASRTAAVATSEGTTVG
Sbjct: 241 LHMKPKPPPAEPKSESKKDSSAAGATLTAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of Cmc08g0236161.1 vs. ExPASy TrEMBL
Match: A0A0A0KZX1 (Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_4G308590 PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.3e-144
Identity = 272/290 (93.79%), Postives = 279/290 (96.21%), Query Frame = 0


Query: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTLQAESADDSSPIFGNLPYDLGDDLPPT 60
           MSTFAGT P PF+DAT GFEPRLASQRFETFST +AESADDSSPIFGNLPYD GD + PT
Sbjct: 1   MSTFAGTPPSPFDDATNGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT 60

Query: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSA GGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEK+E ELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEEKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKE+KPAI+VIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 291
           LHMKPKPPPAEPK+ESKKDSSAAGATLAAGSG AASRTAAVATSEG TVG
Sbjct: 241 LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 290

[Close]

BLAST of Cmc08g0236161.1 vs. ExPASy TrEMBL
Match: A0A6J1DDM4 (Clathrin light chain OS=Momordica charantia OX=3673 GN=LOC111019409 PE=3 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.9e-112
Identity = 228/306 (74.51%), Postives = 260/306 (84.97%), Query Frame = 0


Query: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTLQAE----SADDSSPIFGNLPYDLGDD 60
           MSTFAG +PPPF+D T G++PRL+SQRFE+FS  +AE    SA DSSPIFG+   + GDD
Sbjct: 1   MSTFAG-APPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60

Query: 61  L--------PPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFP 120
           L         P+PP+NFS  GGFS+FS +QNGKGFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYL 180
           LREWRRLNAIRLEEKEK+EKELL+EIIDEADQYKI+FYRRRKLALD++KA+NRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180

Query: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEEKPAIIVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKE+KPAI+VIQGPKPGKPTDLSRM
Sbjct: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMKPKPPP-AEPKSESKKDSS----AAGATLAAGSGLAASRT---AA 287
           RQIHLKLK NTPLHM+PKPPP +E K++ K+DSS    AAGA+   GSG ++S T   AA
Sbjct: 241 RQIHLKLKRNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPKAAA 300

[Close]

BLAST of Cmc08g0236161.1 vs. TAIR 10
Match: AT2G40060.1 (Clathrin light chain protein )

HSP 1 Score: 218.4 bits (555), Expect = 7.6e-57
Identity = 116/192 (60.42%), Postives = 150/192 (78.12%), Query Frame = 0


Query: 72  SSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKKEKELL 131
           S + +  NG G  G  G+ DGPIL  P+ ME +EGF LREWRR NAI+LEEKEK+EKELL
Sbjct: 54  SDYGAYSNGDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELL 113

Query: 132 EEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIP 191
           ++II+EADQYK EF+++ ++  +++KA NR+KEK YL NQEKF+AE+ KNYWKAIAEL+P
Sbjct: 114 KQIIEEADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVP 173

Query: 192 NEVPTIE-QRGKKDKEE--KPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMK-PKP 251
            EVPTIE +RGKK++++  KP + VIQGPKPGKPTDL+RMRQI +KLKHN P H+K    
Sbjct: 174 KEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLTSQ 233

Query: 252 PPAEPKSESKKD 260
           PP+E  +   K+
Sbjct: 234 PPSEEAAAPPKN 245

[Close]

BLAST of Cmc08g0236161.1 vs. TAIR 10
Match: AT3G51890.1 (Clathrin light chain protein )

HSP 1 Score: 206.8 bits (525), Expect = 2.3e-53
Identity = 106/162 (65.43%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 87  FGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKKEKELLEEIIDEADQYKIEFY 146
           F +++  IL  P+AME EEGF LREWRRLNA+RLEEKEK+EKE++++I++ A+QYK EFY
Sbjct: 78  FDDTNDSILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILEAAEQYKAEFY 137

Query: 147 RRRKLALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKE 206
            +R + ++++K  NR+KEK +L NQEKF+AEADKN WKAIAELIP EVP IE RG K K 
Sbjct: 138 SKRNVTIENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPREVPVIENRGNKKK- 197

Query: 207 EKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPP 249
               I VIQGPKPGKPTDLSRMRQ+  KLKHN P HMKPK P
Sbjct: 198 -TATITVIQGPKPGKPTDLSRMRQVLTKLKHNPPTHMKPKLP 237

[Close]

BLAST of Cmc08g0236161.1 vs. TAIR 10
Match: AT2G20760.1 (Clathrin light chain protein )

HSP 1 Score: 205.7 bits (522), Expect = 5.1e-53
Identity = 120/204 (58.82%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 60  TPPTNFSAVGGFSSFSSQQNGKGFDGGFG-----ESDGPILSSPTAMEPEEGFPLREWRR 119
           +P  +FS+   F S  +  NG G  GG G      SDGPIL  P  M  EEGF  REWRR
Sbjct: 62  SPNHDFSS--PFESSVNDANGNG--GGSGGDAIFASDGPILPDPNEMR-EEGFQRREWRR 121

Query: 120 LNAIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKF 179
           LN I LEEKEKKEKE+  +II EA+ +K  FY +R   ++ +K  NR+KEK Y ANQEKF
Sbjct: 122 LNTIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYWANQEKF 181

Query: 180 HAEADKNYWKAIAELIPNEVPTIE-QRGKKDKEEKPAIIVIQGPKPGKPTDLSRMRQIHL 239
           H E DK+YWKAIAELIP EVP IE +RGKKD ++KP++ VIQGPKPGKPTDL RMRQI L
Sbjct: 182 HKEVDKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQIFL 241

Query: 240 KLKHNTPLHMKPKPPPAEPKSESK 258
           KLK N P HM P PPPA+   + K
Sbjct: 242 KLKTNPPPHMMPPPPPAKDAKDGK 260

The following BLAST results are available for this feature:

BLAST of Cmc08g0236161.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449287.1	1.8e-153	98.97	PREDICTED: clathrin light chain 2-like [Cucumis melo] >KAA0045034.1 clathrin lig...	[more]
TYJ96292.1	2.4e-153	98.97	clathrin light chain 2-like [Cucumis melo var. makuwa]	[more]
XP_004147885.1	2.6e-144	93.79	clathrin light chain 2 [Cucumis sativus] >KGN54369.1 hypothetical protein Csa_01...	[more]
XP_038882671.1	2.5e-134	87.54	clathrin light chain 2-like [Benincasa hispida] >XP_038882672.1 clathrin light c...	[more]
XP_022151477.1	5.9e-112	74.51	clathrin light chain 2-like [Momordica charantia]	[more]

BLAST of Cmc08g0236161.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04209	1.1e-55	60.42	Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1	[more]
F4J5M9	3.2e-52	65.43	Clathrin light chain 3 OS=Arabidopsis thaliana OX=3702 GN=At3g51890 PE=1 SV=1	[more]
Q9SKU1	7.2e-52	58.82	Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1	[more]
Q5Z402	7.9e-51	53.75	Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 ...	[more]
Q7XKE9	4.3e-49	46.82	Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 ...	[more]

BLAST of Cmc08g0236161.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TPG9	8.8e-154	98.97	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G...	[more]
A0A1S3BLP9	8.8e-154	98.97	Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103491206 PE=3 SV=1	[more]
A0A5D3B8W6	1.2e-153	98.97	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold782...	[more]
A0A0A0KZX1	1.3e-144	93.79	Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_4G308590 PE=3 SV=1	[more]
A0A6J1DDM4	2.9e-112	74.51	Clathrin light chain OS=Momordica charantia OX=3673 GN=LOC111019409 PE=3 SV=1	[more]

BLAST of Cmc08g0236161.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40060.1	7.6e-57	60.42	Clathrin light chain protein	[more]
AT3G51890.1	2.3e-53	65.43	Clathrin light chain protein	[more]
AT2G20760.1	5.1e-53	58.82	Clathrin light chain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 117..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..290
None	No IPR available	PANTHER	PTHR10639:SF24	CLATHRIN LIGHT CHAIN 3	coord: 12..282
IPR000996	Clathrin light chain	PFAM	PF01086	Clathrin_lg_ch	coord: 96..206 e-value: 2.7E-10 score: 40.7
IPR000996	Clathrin light chain	PANTHER	PTHR10639	CLATHRIN LIGHT CHAIN	coord: 12..282

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc08g0236161	Cmc08g0236161	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0236161.1-exon	Cmc08g0236161.1-exon-CMiso1.1chr08:32482025..32482855	exon
Cmc08g0236161.1-exon	Cmc08g0236161.1-exon-CMiso1.1chr08:32483835..32483988	exon
Cmc08g0236161.1-exon	Cmc08g0236161.1-exon-CMiso1.1chr08:32484969..32485472	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0236161.1-three_prime_utr	Cmc08g0236161.1-three_prime_utr-CMiso1.1chr08:32482025..32482477	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0236161.1-cds	Cmc08g0236161.1-cds-CMiso1.1chr08:32482478..32482855	CDS
Cmc08g0236161.1-cds	Cmc08g0236161.1-cds-CMiso1.1chr08:32483835..32483988	CDS
Cmc08g0236161.1-cds	Cmc08g0236161.1-cds-CMiso1.1chr08:32484969..32485309	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc08g0236161.1-five_prime_utr	Cmc08g0236161.1-five_prime_utr-CMiso1.1chr08:32485310..32485472	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc08g0236161.1	Cmc08g0236161.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0072583	clathrin-dependent endocytosis
cellular_component	GO:0030132	clathrin coat of coated pit
cellular_component	GO:0030130	clathrin coat of trans-Golgi network vesicle
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0032050	clathrin heavy chain binding