Cmc07g0193341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0193341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	30S ribosomal protein S11
Location	CMiso1.1chr07: 14776747 .. 14779134 (-)
RNA-Seq Expression	Cmc07g0193341
Synteny	Cmc07g0193341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTACAATATTCTTGAAGTTGAAGAAACAAGAAAGTGGGGACACTCCTACTCCTCCCTCTTAATCGTATGTCTATGTCTCGTCCACCAAGAGGGGAAAATACTTCATAGGGTTTTCTTTTCCCCACTTCTTCTTATTCCCAATAATCAACCGCCTGCGCCCCTCCCACGACGATGCCGAAACTTTCCCTCTCTCACCTCTCCCCTCTCTTCCGCTCATCCTCTCTCTCTCGTTCCCCTTCCTTTTCTCCCTCTCGCCTCTCCATTTCACCATTCATTGGCTCAGATGCTCCTTCACGCTTCTCCTCCCCCCTCCCTTCACATCTCACTGGATCCCTTCAACCACACAACCACTTCTCAGGTGAATACTGCTCTCTATTTTCTATCTGATTCTGGACATGACAATTAGAATTTATGGTTTGGTTTCTTTAGTGATGAGTGTTCCGCGTATTGCAGGCTCTGTTGGTCGAGAGATTGTAGGACGTGGTTGGAAAGCCATGGGAGTTCAGGGTCCTAGTTGGGGTTTGGCGCGTTCAACTGAAAGTGTCTCCGTTCCTTATTCTATTAGCTCTAGATGTTATGGAGAGTACGACAACCGCCCTAATCCTCCAGATACAGGAAGGAATCTTAAGACTTTGAACTTCGTTAGGGGAATTTTAGAGGAAGATGAAAAGGTTTTTTCGGATGTTCCTCAGTACCTTAGGCCAACCAATATGGAACACAATGCTGATATTGTTCATATAAAGCTGATGCGTAACAATGCATTTGTTACTGTTACGGATAACAAGGGAAATACGAAGCTCAAGGCCTCTGCTGGTCGTCTTGAAGAACTGAAAGGAGGGGGGGCTAAACTGTCTCGTTATTCTGGTGATTCAATTGCAGAGTATGTTGGTCGTGAATCTAGAAAATTGGGGCTAAAATCAGTTGTGATGAGGGTGAAAGGCTTTACCTTTTTTAAGAAGAAAAAGCAAGCCATCTTGAGTTGGAGAGATGGATTTACTGATTCTAGAAGTGATCAAAATCCGATTGTTTACATTGAAGATACGACAAGACGTGCACACAATGGTTGCCGACTCCCAAAGAAACGCCGTGTGTAGATTTATGGTGCTAGATCTTGCAATTATTGCAATAGCAAAGTGGTGATGAGGTCTTTCTTTTATCTTTGTTGGCTCAGTTTCGAATTTATGTAGCTAGCTTGCCTTCAACTGTTTACTTTCTTATTTACATAATGATGACAATTGGGATGTTTCTATGTGCATCAGTGTAAAATTTTCCTGGTTGAAACGGATGTAGCTTGCCTTCAAGTTCTTACTTGCTTATTACAATAATGATGACATAGGATGGTTTTCTATATACATCAGTGTAAAACATTTGCTTTTTAGTTATTGCCATATGGACTTCATTTCAATAGAACGATACGAAGAATTTAAGTGGCCCCCACCTCCCAATCTTTTTACTTTGAAGTTTATTTTCATCTGTTACTATGTTGTGGATTACACATTTCTTGGACCTTACATCTGTGCTTCTCAGTTCTCACTGTGATCCCACCCTTGCTTGGAATTCTTGTTTTACTGTTTGCGTAAAAGATTTTTGTTTCTAGTAATGGTATCAGTCGAAGGCGGCTTCGACTGGTTTAACTACAGGACAGATGCAGTTATCATAATGTATTGACCAGTGCTTTTGTTTGGGAGGTATTTATGTAGATTTGCAGGCTTTTTGATCGTTGATACTGGATTTATACTCTGAATCTGGACCCTCAGCAGGGATGGCCACATCATGCGCACAGCATGTAGATTCATAATTGTTGCTAACAATGACATGGAGTTATACAAAACGTTCTAGAATCAGAAAGCCTTGACGCATAGTTGGTAGAGGGTGTTCCTCCACACAACTCTGAATAGAATGGAGCAATAAAGCTACTGAGGGTGGTATGTTGATATGCACATGATGGCTCATTTGAAGTTGCTGCGCTCATGTTTTCTTGCTAAGTCTTTTCTGATGATGTAATTTGTCGCTGTCTCAGCTTCGGCAGCACATCCTTTTTAGTCTTGGAGGTACTTGCATTGCATCAACTGATGTGAAAATGAATACTGGTCATAGGGATGAACTCAATGGACACGAATTTGTCTCTTTCTAATTTTTGATTATCGTATACATAGTGTCAGTTTCTAATGTATGATTATCGCATTCATAGTCTATGTATATTTATTAATGTGTGAGTTTGTAGGACATCATGTGGAAGCTGACATGAAAACCTGTGTTTATTTATTTATTATTATTAGCGTATCTTTGAAAAACTGTCTTCAAAGTAGGATGGTTGTAGCAATTATATCTCCAAACATAAATCATTTAGAAACGTGATAACACATTGTTATGTATTGTGATTTATC

mRNA sequence

TTTACAATATTCTTGAAGTTGAAGAAACAAGAAAGTGGGGACACTCCTACTCCTCCCTCTTAATCGTATGTCTATGTCTCGTCCACCAAGAGGGGAAAATACTTCATAGGGTTTTCTTTTCCCCACTTCTTCTTATTCCCAATAATCAACCGCCTGCGCCCCTCCCACGACGATGCCGAAACTTTCCCTCTCTCACCTCTCCCCTCTCTTCCGCTCATCCTCTCTCTCTCGTTCCCCTTCCTTTTCTCCCTCTCGCCTCTCCATTTCACCATTCATTGGCTCAGATGCTCCTTCACGCTTCTCCTCCCCCCTCCCTTCACATCTCACTGGATCCCTTCAACCACACAACCACTTCTCAGGCTCTGTTGGTCGAGAGATTGTAGGACGTGGTTGGAAAGCCATGGGAGTTCAGGGTCCTAGTTGGGGTTTGGCGCGTTCAACTGAAAGTGTCTCCGTTCCTTATTCTATTAGCTCTAGATGTTATGGAGAGTACGACAACCGCCCTAATCCTCCAGATACAGGAAGGAATCTTAAGACTTTGAACTTCGTTAGGGGAATTTTAGAGGAAGATGAAAAGGTTTTTTCGGATGTTCCTCAGTACCTTAGGCCAACCAATATGGAACACAATGCTGATATTGTTCATATAAAGCTGATGCGTAACAATGCATTTGTTACTGTTACGGATAACAAGGGAAATACGAAGCTCAAGGCCTCTGCTGGTCGTCTTGAAGAACTGAAAGGAGGGGGGGCTAAACTGTCTCGTTATTCTGGTGATTCAATTGCAGAGTATGTTGGTCGTGAATCTAGAAAATTGGGGCTAAAATCAGTTGTGATGAGGGTGAAAGGCTTTACCTTTTTTAAGAAGAAAAAGCAAGCCATCTTGAGTTGGAGAGATGGATTTACTGATTCTAGAAGTGATCAAAATCCGATTGTTTACATTGAAGATACGACAAGACGTGCACACAATGGTTGCCGACTCCCAAAGAAACGCCGTGTGTAGATTTATGGTGCTAGATCTTGCAATTATTGCAATAGCAAAGTGGTGATGAGGTCTTTCTTTTATCTTTGTTGGCTCAGTTTCGAATTTATGTAGCTAGCTTGCCTTCAACTGTTTACTTTCTTATTTACATAATGATGACAATTGGGATGTTTCTATGTGCATCAGTGTAAAATTTTCCTGGTTGAAACGGATGTAGCTTGCCTTCAAGTTCTTACTTGCTTATTACAATAATGATGACATAGGATGGTTTTCTATATACATCAGTGTAAAACATTTGCTTTTTAGTTATTGCCATATGGACTTCATTTCAATAGAACGATACGAAGAATTTAAGTGGCCCCCACCTCCCAATCTTTTTACTTTGAAGTTTATTTTCATCTGTTACTATGTTGTGGATTACACATTTCTTGGACCTTACATCTGTGCTTCTCAGTTCTCACTGTGATCCCACCCTTGCTTGGAATTCTTGTTTTACTGTTTGCGTAAAAGATTTTTGTTTCTAGTAATGGTATCAGTCGAAGGCGGCTTCGACTGGTTTAACTACAGGACAGATGCAGTTATCATAATGTATTGACCAGTGCTTTTGTTTGGGAGGTATTTATGTAGATTTGCAGGCTTTTTGATCGTTGATACTGGATTTATACTCTGAATCTGGACCCTCAGCAGGGATGGCCACATCATGCGCACAGCATGTAGATTCATAATTGTTGCTAACAATGACATGGAGTTATACAAAACGTTCTAGAATCAGAAAGCCTTGACGCATAGTTGGTAGAGGGTGTTCCTCCACACAACTCTGAATAGAATGGAGCAATAAAGCTACTGAGGGTGCTTCGGCAGCACATCCTTTTTAGTCTTGGAGGTACTTGCATTGCATCAACTGATGTGAAAATGAATACTGGTCATAGGGATGAACTCAATGGACACGAATTTGTCTCTTTCTAATTTTTGATTATCGTATACATAGTGTCAGTTTCTAATGTATGATTATCGCATTCATAGTCTATGTATATTTATTAATGTGTGAGTTTGTAGGACATCATGTGGAAGCTGACATGAAAACCTGTGTTTATTTATTTATTATTATTAGCGTATCTTTGAAAAACTGTCTTCAAAGTAGGATGGTTGTAGCAATTATATCTCCAAACATAAATCATTTAGAAACGTGATAACACATTGTTATGTATTGTGATTTATC

Coding sequence (CDS)

ATGCCGAAACTTTCCCTCTCTCACCTCTCCCCTCTCTTCCGCTCATCCTCTCTCTCTCGTTCCCCTTCCTTTTCTCCCTCTCGCCTCTCCATTTCACCATTCATTGGCTCAGATGCTCCTTCACGCTTCTCCTCCCCCCTCCCTTCACATCTCACTGGATCCCTTCAACCACACAACCACTTCTCAGGCTCTGTTGGTCGAGAGATTGTAGGACGTGGTTGGAAAGCCATGGGAGTTCAGGGTCCTAGTTGGGGTTTGGCGCGTTCAACTGAAAGTGTCTCCGTTCCTTATTCTATTAGCTCTAGATGTTATGGAGAGTACGACAACCGCCCTAATCCTCCAGATACAGGAAGGAATCTTAAGACTTTGAACTTCGTTAGGGGAATTTTAGAGGAAGATGAAAAGGTTTTTTCGGATGTTCCTCAGTACCTTAGGCCAACCAATATGGAACACAATGCTGATATTGTTCATATAAAGCTGATGCGTAACAATGCATTTGTTACTGTTACGGATAACAAGGGAAATACGAAGCTCAAGGCCTCTGCTGGTCGTCTTGAAGAACTGAAAGGAGGGGGGGCTAAACTGTCTCGTTATTCTGGTGATTCAATTGCAGAGTATGTTGGTCGTGAATCTAGAAAATTGGGGCTAAAATCAGTTGTGATGAGGGTGAAAGGCTTTACCTTTTTTAAGAAGAAAAAGCAAGCCATCTTGAGTTGGAGAGATGGATTTACTGATTCTAGAAGTGATCAAAATCCGATTGTTTACATTGAAGATACGACAAGACGTGCACACAATGGTTGCCGACTCCCAAAGAAACGCCGTGTGTAG

Protein sequence

MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNHFSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPPDTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV

Homology

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BLAST of Cmc07g0193341 vs. NCBI nr
Match: XP_008455641.1 (PREDICTED: probable ribosomal protein S11, mitochondrial [Cucumis melo] >KAA0045282.1 putative ribosomal protein S11 [Cucumis melo var. makuwa])

HSP 1 Score: 546.6 bits (1407), Expect = 1.2e-151
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60
           MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH
Sbjct: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60

Query: 61  FSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPPDTGRNL 120
           FSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPPDTGRNL
Sbjct: 61  FSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPPDTGRNL 120

Query: 121 KTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKGNTKLKA 180
           KTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKGNTKLKA
Sbjct: 121 KTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKGNTKLKA 180

Query: 181 SAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWR 240
           SAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWR
Sbjct: 181 SAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWR 240

Query: 241 DGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 276
           DGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV
Sbjct: 241 DGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 275

[Close]

BLAST of Cmc07g0193341 vs. NCBI nr
Match: TYK31671.1 (putative ribosomal protein S11 [Cucumis melo var. makuwa])

HSP 1 Score: 484.2 bits (1245), Expect = 7.5e-133
Identity = 239/240 (99.58%), Postives = 239/240 (99.58%), Query Frame = 0


Query: 36  GSDAPSRFSSPLPSHLTGSLQPHNHFSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSV 95
           G DAPSRFSSPLPSHLTGSLQPHNHFSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSV
Sbjct: 43  GVDAPSRFSSPLPSHLTGSLQPHNHFSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSV 102

Query: 96  PYSISSRCYGEYDNRPNPPDTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADI 155
           PYSISSRCYGEYDNRPNPPDTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADI
Sbjct: 103 PYSISSRCYGEYDNRPNPPDTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADI 162

Query: 156 VHIKLMRNNAFVTVTDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLG 215
           VHIKLMRNNAFVTVTDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLG
Sbjct: 163 VHIKLMRNNAFVTVTDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLG 222

Query: 216 LKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 275
           LKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV
Sbjct: 223 LKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 282

[Close]

BLAST of Cmc07g0193341 vs. NCBI nr
Match: XP_004137167.1 (probable ribosomal protein S11, mitochondrial [Cucumis sativus])

HSP 1 Score: 464.9 bits (1195), Expect = 4.7e-127
Identity = 241/281 (85.77%), Postives = 254/281 (90.39%), Query Frame = 0


Query: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60
           MPKLSLSHLS LFRSSSLS +PSFSPSRLSISPFIGSDAPSR SS   S LTGSLQPHN 
Sbjct: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60

Query: 61  FSG------SVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPP 120
           FSG      +VGREIVGRGWK+MGVQGPS GLAR +E VS+PYSISSRCYGEYDNRPNPP
Sbjct: 61  FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLARPSEGVSIPYSISSRCYGEYDNRPNPP 120

Query: 121 DTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKG 180
           DTGRNLK +NFVRGILEE+E+ F   PQ+LRP+NMEHNADIVHIKLMRNN+FVTVTDNKG
Sbjct: 121 DTGRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKG 180

Query: 181 NTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ 240
           NTKLKASAGRLE    GGAKLSRYS DSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ
Sbjct: 181 NTKLKASAGRLE----GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ 240

Query: 241 AILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 276
           AILSWRDGFTDSR+DQNPIVY+EDTTRRAHNGCRLPKKRRV
Sbjct: 241 AILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 277

[Close]

BLAST of Cmc07g0193341 vs. NCBI nr
Match: KAE8649303.1 (hypothetical protein Csa_014520 [Cucumis sativus])

HSP 1 Score: 399.1 bits (1024), Expect = 3.2e-107
Identity = 218/281 (77.58%), Postives = 229/281 (81.49%), Query Frame = 0


Query: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60
           MPKLSLSHLS LFRSSSLS +PSFSPSRLSISPFIGSDAPSR SS   S LTGSLQPHN 
Sbjct: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60

Query: 61  FSG------SVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPP 120
           FSG      +VGREIVGRGWK+MGVQGPS GLAR                         P
Sbjct: 61  FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLAR-------------------------P 120

Query: 121 DTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKG 180
             GRNLK +NFVRGILEE+E+ F   PQ+LRP+NMEHNADIVHIKLMRNN+FVTVTDNKG
Sbjct: 121 SEGRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKG 180

Query: 181 NTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ 240
           NTKLKASAGRLE    GGAKLSRYS DSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ
Sbjct: 181 NTKLKASAGRLE----GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ 240

Query: 241 AILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 276
           AILSWRDGFTDSR+DQNPIVY+EDTTRRAHNGCRLPKKRRV
Sbjct: 241 AILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 252

[Close]

BLAST of Cmc07g0193341 vs. NCBI nr
Match: XP_038903066.1 (probable ribosomal protein S11, mitochondrial [Benincasa hispida])

HSP 1 Score: 383.6 bits (984), Expect = 1.4e-102
Identity = 203/285 (71.23%), Postives = 229/285 (80.35%), Query Frame = 0


Query: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60
           MPKLSLSHL  LFRSSSL   PSFSPSRLSISPFIGSD+ S  SS   S LTGS++  N 
Sbjct: 1   MPKLSLSHLYSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSIHRSDLTGSIRLDNQ 60

Query: 61  FSG----------SVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNR 120
            SG          +VGREIVGRGWK+ G QG  W L RS+E VSV +S S RCYG+YDNR
Sbjct: 61  LSGCLDLSQGDSANVGREIVGRGWKSTGAQGSCWSLGRSSECVSVSHSTSYRCYGQYDNR 120

Query: 121 PNPPDTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVT 180
           PN  DTGRNL +++FVR  LEE  + F+   ++ R  NMEHNADIVH+KL+RNN F+TVT
Sbjct: 121 PN-ADTGRNLNSMSFVRDTLEEGGRYFTGSSRFFRQPNMEHNADIVHVKLLRNNTFITVT 180

Query: 181 DNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFK 240
           DNKGNTKLKASAGRLEELK GG KLSRY+ +++AEYVGRESRKLGLKSVVMRVKGFT FK
Sbjct: 181 DNKGNTKLKASAGRLEELK-GGPKLSRYAAEAVAEYVGRESRKLGLKSVVMRVKGFTIFK 240

Query: 241 KKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 276
           +K+QAI+SWR GFTDSRSDQNPIVYIEDTTRRAHNGCRLPK+RRV
Sbjct: 241 RKRQAIISWRAGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 283

[Close]

BLAST of Cmc07g0193341 vs. ExPASy Swiss-Prot
Match: Q8VZT8 (Probable ribosomal protein S11, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD3 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.0e-48
Identity = 92/160 (57.50%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 116 TGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKGN 175
           +G     L+FVR ++E++ +  + +  + +  N+E NADI+HIK++RNN FVTVTD+KGN
Sbjct: 156 SGGKSSDLDFVREVIEDEGRRTAGIFSHFQRPNLETNADIIHIKMLRNNTFVTVTDSKGN 215

Query: 176 TKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQA 235
            K KA++G L +LK GG K++ Y+ D+ AE +GR ++ +GLKSVV++V GFT F KKK+A
Sbjct: 216 VKCKATSGSLPDLK-GGRKMTNYTADATAENIGRRAKAMGLKSVVVKVNGFTHFGKKKKA 275

Query: 236 ILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 276
           I+++RDGFT+SRSDQNPIVYIEDTTR+AHNGCRLP+KRRV
Sbjct: 276 IIAFRDGFTNSRSDQNPIVYIEDTTRKAHNGCRLPRKRRV 314

[Close]

BLAST of Cmc07g0193341 vs. ExPASy Swiss-Prot
Match: P46746 (Ribosomal protein S11, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS11 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.4e-09
Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 0


Query: 149 MEHNADIVHIKLMRNNAFVTVTDNKGNTKLKASAGRLEELKGGGAKLSR----YSGDSIA 208
           +E  + IVHI+   NN  +T+TD +GNT+   SAG L      G K SR    Y+  + A
Sbjct: 13  IEKKSGIVHIQSTTNNTLITLTDLEGNTQFFVSAGTL------GFKNSRKSTVYASGAAA 72

Query: 209 EYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAH 268
           E +  ++   G +++++++KG  + KK               +     I  I++ T  AH
Sbjct: 73  EALASKAFNEGYRTIIVKIKGLGYGKK---------SAIRGLQKSNLVIKQIQEVTPIAH 128

Query: 269 NGCRLPKKRRV 276
           NGCR PKKRRV
Sbjct: 133 NGCRPPKKRRV 128

[Close]

BLAST of Cmc07g0193341 vs. ExPASy Swiss-Prot
Match: P26870 (Ribosomal protein S11, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS11 PE=3 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-08
Identity = 44/129 (34.11%), Postives = 63/129 (48.84%), Query Frame = 0


Query: 147 TNMEHNADIVHIKLMRNNAFVTVTDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEY 206
           TNM+    I +I+    N  +T+TD  GNTK  +S+G +     G  + + Y+  + AE 
Sbjct: 8   TNMQKKHCITYIQSTFGNTIITLTDYNGNTKTWSSSGSVG--FKGSRRSTNYAAQATAEN 67

Query: 207 VGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNG 266
             R + +LG K V +R+KG  + K+     L         +     I  I D T   HNG
Sbjct: 68  AARVAIQLGFKFVEVRIKGLGYGKESSLRGL---------KLGGLIITKIRDVTPTPHNG 125

Query: 267 CRLPKKRRV 276
           CR PKKRRV
Sbjct: 128 CRPPKKRRV 125

[Close]

BLAST of Cmc07g0193341 vs. ExPASy Swiss-Prot
Match: A5CCJ0 (30S ribosomal protein S11 OS=Orientia tsutsugamushi (strain Boryong) OX=357244 GN=rpsK PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.9e-08
Identity = 46/122 (37.70%), Postives = 64/122 (52.46%), Query Frame = 0


Query: 155 IVHIKLMRNNAFVTVTDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKL 214
           IV+IK   NN  VT TD +GN     SAG +     G  K + Y+   I E V   +++ 
Sbjct: 17  IVYIKSTFNNTIVTFTDMQGNAIAALSAGAIG--FKGAKKATPYAAQVIVEKVSEVAKEH 76

Query: 215 GLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRSDQNPIV-YIEDTTRRAHNGCRLPKKR 274
           G+K++ +R++G            S R+    +  +QN IV  I DT+  AHNGCR PKKR
Sbjct: 77  GIKTLSIRIQGAG----------SQRESALRAIFNQNFIVTSITDTSPVAHNGCRPPKKR 126

Query: 275 RV 276
           RV
Sbjct: 137 RV 126

[Close]

BLAST of Cmc07g0193341 vs. ExPASy Swiss-Prot
Match: B3CT28 (30S ribosomal protein S11 OS=Orientia tsutsugamushi (strain Ikeda) OX=334380 GN=rpsK PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.9e-08
Identity = 46/122 (37.70%), Postives = 64/122 (52.46%), Query Frame = 0


Query: 155 IVHIKLMRNNAFVTVTDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKL 214
           IV+IK   NN  VT TD +GN     SAG +     G  K + Y+   I E V   +++ 
Sbjct: 17  IVYIKSTFNNTIVTFTDMQGNAIAALSAGAIG--FKGAKKATPYAAQVIVEKVSEVAKEH 76

Query: 215 GLKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRSDQNPIV-YIEDTTRRAHNGCRLPKKR 274
           G+K++ +R++G            S R+    +  +QN IV  I DT+  AHNGCR PKKR
Sbjct: 77  GIKTLSIRIQGAG----------SQRESALRAIFNQNFIVTSITDTSPVAHNGCRPPKKR 126

Query: 275 RV 276
           RV
Sbjct: 137 RV 126

[Close]

BLAST of Cmc07g0193341 vs. ExPASy TrEMBL
Match: A0A5A7TPI6 (Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00350 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.0e-152
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60
           MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH
Sbjct: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60

Query: 61  FSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPPDTGRNL 120
           FSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPPDTGRNL
Sbjct: 61  FSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPPDTGRNL 120

Query: 121 KTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKGNTKLKA 180
           KTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKGNTKLKA
Sbjct: 121 KTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKGNTKLKA 180

Query: 181 SAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWR 240
           SAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWR
Sbjct: 181 SAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWR 240

Query: 241 DGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 276
           DGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV
Sbjct: 241 DGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 275

[Close]

BLAST of Cmc07g0193341 vs. ExPASy TrEMBL
Match: A0A1S3C2M0 (probable ribosomal protein S11, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103495763 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.0e-152
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60
           MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH
Sbjct: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60

Query: 61  FSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPPDTGRNL 120
           FSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPPDTGRNL
Sbjct: 61  FSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPPDTGRNL 120

Query: 121 KTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKGNTKLKA 180
           KTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKGNTKLKA
Sbjct: 121 KTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKGNTKLKA 180

Query: 181 SAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWR 240
           SAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWR
Sbjct: 181 SAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQAILSWR 240

Query: 241 DGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 276
           DGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV
Sbjct: 241 DGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 275

[Close]

BLAST of Cmc07g0193341 vs. ExPASy TrEMBL
Match: A0A5D3E7T5 (Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00260 PE=3 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.7e-133
Identity = 239/240 (99.58%), Postives = 239/240 (99.58%), Query Frame = 0


Query: 36  GSDAPSRFSSPLPSHLTGSLQPHNHFSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSV 95
           G DAPSRFSSPLPSHLTGSLQPHNHFSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSV
Sbjct: 43  GVDAPSRFSSPLPSHLTGSLQPHNHFSGSVGREIVGRGWKAMGVQGPSWGLARSTESVSV 102

Query: 96  PYSISSRCYGEYDNRPNPPDTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADI 155
           PYSISSRCYGEYDNRPNPPDTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADI
Sbjct: 103 PYSISSRCYGEYDNRPNPPDTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADI 162

Query: 156 VHIKLMRNNAFVTVTDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLG 215
           VHIKLMRNNAFVTVTDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLG
Sbjct: 163 VHIKLMRNNAFVTVTDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLG 222

Query: 216 LKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 275
           LKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV
Sbjct: 223 LKSVVMRVKGFTFFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 282

[Close]

BLAST of Cmc07g0193341 vs. ExPASy TrEMBL
Match: A0A0A0KVQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107470 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.3e-127
Identity = 241/281 (85.77%), Postives = 254/281 (90.39%), Query Frame = 0


Query: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60
           MPKLSLSHLS LFRSSSLS +PSFSPSRLSISPFIGSDAPSR SS   S LTGSLQPHN 
Sbjct: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60

Query: 61  FSG------SVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNRPNPP 120
           FSG      +VGREIVGRGWK+MGVQGPS GLAR +E VS+PYSISSRCYGEYDNRPNPP
Sbjct: 61  FSGCLRDSANVGREIVGRGWKSMGVQGPSSGLARPSEGVSIPYSISSRCYGEYDNRPNPP 120

Query: 121 DTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKG 180
           DTGRNLK +NFVRGILEE+E+ F   PQ+LRP+NMEHNADIVHIKLMRNN+FVTVTDNKG
Sbjct: 121 DTGRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVTDNKG 180

Query: 181 NTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ 240
           NTKLKASAGRLE    GGAKLSRYS DSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ
Sbjct: 181 NTKLKASAGRLE----GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQ 240

Query: 241 AILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 276
           AILSWRDGFTDSR+DQNPIVY+EDTTRRAHNGCRLPKKRRV
Sbjct: 241 AILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 277

[Close]

BLAST of Cmc07g0193341 vs. ExPASy TrEMBL
Match: A0A6J1KGF8 (probable ribosomal protein S11, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493991 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 6.7e-103
Identity = 209/288 (72.57%), Postives = 228/288 (79.17%), Query Frame = 0


Query: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSH---LTGSLQP 60
           M +L L HLS LFRSSSLS   SFS SR+SISPF G+D  S   S   SH   L+GS+Q 
Sbjct: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60

Query: 61  HNHFSG----------SVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEY 120
               SG          +VGREIVGR WKA+G QGP WGLARS+E+VSVPYS SSRCY  Y
Sbjct: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 DNRPNPPDTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFV 180
           D  PN  DTGRN K++NFVRGILEED   F    Q+ RP NMEHNADIVH+KLMRNN F+
Sbjct: 121 DGPPN-ADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180

Query: 181 TVTDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFT 240
           TVTDNKGNTKLKASAGRLEELK GG KLSRY+ ++ AEYVGRESRKLGLKSVVMRVKGFT
Sbjct: 181 TVTDNKGNTKLKASAGRLEELK-GGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFT 240

Query: 241 FFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 276
           +FKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPK+RRV
Sbjct: 241 YFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of Cmc07g0193341 vs. TAIR 10
Match: AT1G31817.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 192.6 bits (488), Expect = 4.2e-49
Identity = 92/160 (57.50%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 116 TGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVTDNKGN 175
           +G     L+FVR ++E++ +  + +  + +  N+E NADI+HIK++RNN FVTVTD+KGN
Sbjct: 156 SGGKSSDLDFVREVIEDEGRRTAGIFSHFQRPNLETNADIIHIKMLRNNTFVTVTDSKGN 215

Query: 176 TKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFKKKKQA 235
            K KA++G L +LK GG K++ Y+ D+ AE +GR ++ +GLKSVV++V GFT F KKK+A
Sbjct: 216 VKCKATSGSLPDLK-GGRKMTNYTADATAENIGRRAKAMGLKSVVVKVNGFTHFGKKKKA 275

Query: 236 ILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 276
           I+++RDGFT+SRSDQNPIVYIEDTTR+AHNGCRLP+KRRV
Sbjct: 276 IIAFRDGFTNSRSDQNPIVYIEDTTRKAHNGCRLPRKRRV 314

The following BLAST results are available for this feature:

BLAST of Cmc07g0193341 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455641.1	1.2e-151	100.00	PREDICTED: probable ribosomal protein S11, mitochondrial [Cucumis melo] >KAA0045...	[more]
TYK31671.1	7.5e-133	99.58	putative ribosomal protein S11 [Cucumis melo var. makuwa]	[more]
XP_004137167.1	4.7e-127	85.77	probable ribosomal protein S11, mitochondrial [Cucumis sativus]	[more]
KAE8649303.1	3.2e-107	77.58	hypothetical protein Csa_014520 [Cucumis sativus]	[more]
XP_038903066.1	1.4e-102	71.23	probable ribosomal protein S11, mitochondrial [Benincasa hispida]	[more]

BLAST of Cmc07g0193341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZT8	6.0e-48	57.50	Probable ribosomal protein S11, mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
P46746	2.4e-09	33.59	Ribosomal protein S11, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS11 ...	[more]
P26870	2.7e-08	34.11	Ribosomal protein S11, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS11 P...	[more]
A5CCJ0	7.9e-08	37.70	30S ribosomal protein S11 OS=Orientia tsutsugamushi (strain Boryong) OX=357244 G...	[more]
B3CT28	7.9e-08	37.70	30S ribosomal protein S11 OS=Orientia tsutsugamushi (strain Ikeda) OX=334380 GN=...	[more]

BLAST of Cmc07g0193341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TPI6	6.0e-152	100.00	Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3C2M0	6.0e-152	100.00	probable ribosomal protein S11, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5D3E7T5	3.7e-133	99.58	Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0KVQ8	2.3e-127	85.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107470 PE=3 SV=1	[more]
A0A6J1KGF8	6.7e-103	72.57	probable ribosomal protein S11, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Cmc07g0193341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31817.1	4.2e-49	57.50	Ribosomal L18p/L5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036967	Ribosomal protein S11 superfamily	GENE3D	3.30.420.80	Ribosomal protein S11	coord: 144..275 e-value: 2.7E-30 score: 107.2
IPR001971	Ribosomal protein S11	PFAM	PF00411	Ribosomal_S11	coord: 155..274 e-value: 1.3E-10 score: 41.6
IPR001971	Ribosomal protein S11	PANTHER	PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	coord: 81..275
IPR001971	Ribosomal protein S11	HAMAP	MF_01310	Ribosomal_S11	coord: 121..275 score: 15.065508
None	No IPR available	PANTHER	PTHR11759:SF34	RIBOSOMAL PROTEIN S11, MITOCHONDRIAL-RELATED	coord: 81..275
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 153..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0193341.1	Cmc07g0193341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0048027	mRNA 5'-UTR binding
molecular_function	GO:0070181	small ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome