Cmc07g0186321 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0186321
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Proteasome subunit beta
Location	CMiso1.1chr07: 4280796 .. 4281330 (+)
RNA-Seq Expression	Cmc07g0186321
Synteny	Cmc07g0186321

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGATGGGAAGGCTTTACCAGAGGGGTCTGTGGTTAATGGAAGTGCTGTAGTTGCGATGGTGGGGAAGAATTGCTTTGCCATTGCCAGTGATCGTAGACTTGGTGTTCAGTTGCAGACTATTGCCACAGATTTCCAGAAAATTTACAGGATTCATGATAAGCTATTTCTTGGCCTTTCGGGGCTTGGTACCGATGCTCAGACACTGTATGTTTCTGTTGGTGGATTTGTTTGTTTTGGTCTAATTTGTCATTGCTTACCTCCTGCCCTTGAAATGAAGGTATCAACGGCTTGTTTATCAGCACAAACTGTACCAACTTCGTGAAGAGAGGGACATGAAGCCTGAGACTTTTGCTAGCCTTGTCTCAGCTCGTCTTTATGAGAAAAGGTTGGACAACTACTTAGTTATTACTTTCCTCTTTTTCATCACCCATATTCTCTATTTCTCGTTATCAATGAAAAAATATGGATGGGATTTCTATAGGATTTCCGCGGCTTCCTTTGTGTGTCTATTGATTCTTCTACCAATGTAA

mRNA sequence

ATGCAGGATGGGAAGGCTTTACCAGAGGGGTCTGTGGTTAATGGAAGTGCTGTAGTTGCGATGGTGGGGAAGAATTGCTTTGCCATTGCCAGTGATCGTAGACTTGGTGTTCAGTTGCAGACTATTGCCACAGATTTCCAGAAAATTTACAGGATTCATGATAAGCTATTTCTTGGCCTTTCGGGGCTTGGTACCGATGCTCAGACACTGTATCAACGGCTTGTTTATCAGCACAAACTGTACCAACTTCGTGAAGAGAGGGACATGAAGCCTGAGACTTTTGCTAGCCTTGTCTCAGCTCGTCTTTATGAGAAAAGGTTGGACAACTACTTAGTTATTACTTTCCTCTTTTTCATCACCCATATTCTCTATTTCTCGTTATCAATGAAAAAATATGGATGGGATTTCTATAGGATTTCCGCGGCTTCCTTTGTGTGTCTATTGATTCTTCTACCAATGTAA

Coding sequence (CDS)

ATGCAGGATGGGAAGGCTTTACCAGAGGGGTCTGTGGTTAATGGAAGTGCTGTAGTTGCGATGGTGGGGAAGAATTGCTTTGCCATTGCCAGTGATCGTAGACTTGGTGTTCAGTTGCAGACTATTGCCACAGATTTCCAGAAAATTTACAGGATTCATGATAAGCTATTTCTTGGCCTTTCGGGGCTTGGTACCGATGCTCAGACACTGTATCAACGGCTTGTTTATCAGCACAAACTGTACCAACTTCGTGAAGAGAGGGACATGAAGCCTGAGACTTTTGCTAGCCTTGTCTCAGCTCGTCTTTATGAGAAAAGGTTGGACAACTACTTAGTTATTACTTTCCTCTTTTTCATCACCCATATTCTCTATTTCTCGTTATCAATGAAAAAATATGGATGGGATTTCTATAGGATTTCCGCGGCTTCCTTTGTGTGTCTATTGATTCTTCTACCAATGTAA

Protein sequence

MQDGKALPEGSVVNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVITFLFFITHILYFSLSMKKYGWDFYRISAASFVCLLILLPM

Homology

[Close]

BLAST of Cmc07g0186321 vs. NCBI nr
Match: XP_008466929.1 (PREDICTED: proteasome subunit beta type-3-like, partial [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 2.5e-69
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 15  GSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQRL 74
           GSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQRL
Sbjct: 1   GSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQRL 60

Query: 75  VYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVITFLFFITHILYFSLSMKKYGW 134
           VYQHKLYQLREERDMKPETFASLVS RLYEKRLDNYLVITFLFFITHILYFSLSMKKYGW
Sbjct: 61  VYQHKLYQLREERDMKPETFASLVSTRLYEKRLDNYLVITFLFFITHILYFSLSMKKYGW 120

Query: 135 DFYRISAASFVCLLILLPM 154
           DFYRISAASFVCLLILLPM
Sbjct: 121 DFYRISAASFVCLLILLPM 139

[Close]

BLAST of Cmc07g0186321 vs. NCBI nr
Match: KAA0061976.1 (proteasome subunit beta type-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 219.2 bits (557), Expect = 2.5e-53
Identity = 120/152 (78.95%), Postives = 120/152 (78.95%), Query Frame = 0


Query: 2   QDGKALPEGSVVNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLS 61
           QDGKALPEGSVVNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLS
Sbjct: 485 QDGKALPEGSVVNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLS 544

Query: 62  GLGTDAQTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVITFLFFITH 121
           GLGTDAQTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEK                
Sbjct: 545 GLGTDAQTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEK---------------- 604

Query: 122 ILYFSLSMKKYGWDFYRISAASFVCLLILLPM 154
                           RISAASFVCLLILLPM
Sbjct: 605 ----------------RISAASFVCLLILLPM 604

[Close]

BLAST of Cmc07g0186321 vs. NCBI nr
Match: KAA0055464.1 (E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis melo var. makuwa] >TYK08946.1 E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis melo var. makuwa])

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-43
Identity = 94/97 (96.91%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR
Sbjct: 7   NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNY 111
           LVYQHKLYQLREERDMKPETFASLVSARLYEKR   Y
Sbjct: 67  LVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPY 103

[Close]

BLAST of Cmc07g0186321 vs. NCBI nr
Match: XP_022939821.1 (proteasome subunit beta type-3-A [Cucurbita moschata] >XP_022993932.1 proteasome subunit beta type-3-A [Cucurbita maxima])

HSP 1 Score: 186.4 bits (472), Expect = 1.8e-43
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQT+YQR
Sbjct: 7   NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTMYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNY 111
           LVYQHKLYQLREERDMKPETFASLVSARLYEKR   Y
Sbjct: 67  LVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPY 103

[Close]

BLAST of Cmc07g0186321 vs. NCBI nr
Match: XP_023551487.1 (proteasome subunit beta type-3-A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.4 bits (472), Expect = 1.8e-43
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQT+YQR
Sbjct: 7   NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTMYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNY 111
           LVYQHKLYQLREERDMKPETFASLVSARLYEKR   Y
Sbjct: 67  LVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPY 103

[Close]

BLAST of Cmc07g0186321 vs. ExPASy Swiss-Prot
Match: Q9LST7 (Proteasome subunit beta type-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PBC1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.9e-42
Identity = 82/97 (84.54%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSAVVAMVGKNCFAIASDRRLGVQLQT+ATDFQ++++IHDKL++GLSGL TDAQTLYQR
Sbjct: 7   NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNY 111
           LV++HKLYQLREERDMKP+TFASLVSA LYEKR   Y
Sbjct: 67  LVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPY 103

[Close]

BLAST of Cmc07g0186321 vs. ExPASy Swiss-Prot
Match: Q9XI05 (Proteasome subunit beta type-3-A OS=Arabidopsis thaliana OX=3702 GN=PBC1 PE=1 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-41
Identity = 84/98 (85.71%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD++F+GLSGL TD QTLYQR
Sbjct: 7   NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQTLYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYL 112
           LV++HKLYQLREERDMKPETFASLVSA LYEKR   YL
Sbjct: 67  LVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYL 104

[Close]

BLAST of Cmc07g0186321 vs. ExPASy Swiss-Prot
Match: O81153 (Proteasome subunit beta type-3-B OS=Arabidopsis thaliana OX=3702 GN=PBC2 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.7e-41
Identity = 84/98 (85.71%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD LF+GLSGL TD QTLYQR
Sbjct: 7   NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYL 112
           LV++HKLYQLREERDMKPETFASLVSA LYEKR   +L
Sbjct: 67  LVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFL 104

[Close]

BLAST of Cmc07g0186321 vs. ExPASy Swiss-Prot
Match: O65084 (Proteasome subunit beta type-3 OS=Picea mariana OX=3335 GN=PBC1 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-39
Identity = 79/97 (81.44%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQ+I++IHDKL++GLSGL TD QTLYQR
Sbjct: 7   NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDVQTLYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNY 111
             ++HKLYQLREER+M+PETFASLVSA LYEKR   Y
Sbjct: 67  FAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPY 103

[Close]

BLAST of Cmc07g0186321 vs. ExPASy Swiss-Prot
Match: Q55D66 (Proteasome subunit beta type-3 OS=Dictyostelium discoideum OX=44689 GN=psmB3 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-29
Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NG A + MVGKNC AIASD R G+Q QTI+ DF K+YRI+DK F+G+SGL TDAQTLYQ+
Sbjct: 7   NGGACIVMVGKNCVAIASDLRFGIQQQTISNDFPKVYRINDKCFVGISGLVTDAQTLYQK 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNY 111
           LV++H LY+LREERDM P   ++L++  LYEKR   Y
Sbjct: 67  LVFRHNLYKLREERDMSPRVVSNLLTNMLYEKRFGPY 103

[Close]

BLAST of Cmc07g0186321 vs. ExPASy TrEMBL
Match: A0A1S3CSI2 (proteasome subunit beta type-3-like OS=Cucumis melo OX=3656 GN=LOC103504292 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 15  GSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQRL 74
           GSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQRL
Sbjct: 1   GSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQRL 60

Query: 75  VYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVITFLFFITHILYFSLSMKKYGW 134
           VYQHKLYQLREERDMKPETFASLVS RLYEKRLDNYLVITFLFFITHILYFSLSMKKYGW
Sbjct: 61  VYQHKLYQLREERDMKPETFASLVSTRLYEKRLDNYLVITFLFFITHILYFSLSMKKYGW 120

Query: 135 DFYRISAASFVCLLILLPM 154
           DFYRISAASFVCLLILLPM
Sbjct: 121 DFYRISAASFVCLLILLPM 139

[Close]

BLAST of Cmc07g0186321 vs. ExPASy TrEMBL
Match: A0A5A7V654 (Proteasome subunit beta type-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002760 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53
Identity = 120/152 (78.95%), Postives = 120/152 (78.95%), Query Frame = 0


Query: 2   QDGKALPEGSVVNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLS 61
           QDGKALPEGSVVNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLS
Sbjct: 485 QDGKALPEGSVVNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLS 544

Query: 62  GLGTDAQTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVITFLFFITH 121
           GLGTDAQTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEK                
Sbjct: 545 GLGTDAQTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEK---------------- 604

Query: 122 ILYFSLSMKKYGWDFYRISAASFVCLLILLPM 154
                           RISAASFVCLLILLPM
Sbjct: 605 ----------------RISAASFVCLLILLPM 604

[Close]

BLAST of Cmc07g0186321 vs. ExPASy TrEMBL
Match: A0A5D3CF09 (E3 ubiquitin ligase BIG BROTHER-related-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00370 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 5.1e-44
Identity = 94/97 (96.91%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR
Sbjct: 7   NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNY 111
           LVYQHKLYQLREERDMKPETFASLVSARLYEKR   Y
Sbjct: 67  LVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPY 103

[Close]

BLAST of Cmc07g0186321 vs. ExPASy TrEMBL
Match: A0A6J1JUA3 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111489782 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 8.8e-44
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQT+YQR
Sbjct: 7   NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTMYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNY 111
           LVYQHKLYQLREERDMKPETFASLVSARLYEKR   Y
Sbjct: 67  LVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPY 103

[Close]

BLAST of Cmc07g0186321 vs. ExPASy TrEMBL
Match: A0A6J1FGX2 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111445581 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 8.8e-44
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQT+YQR
Sbjct: 7   NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTMYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNY 111
           LVYQHKLYQLREERDMKPETFASLVSARLYEKR   Y
Sbjct: 67  LVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPY 103

[Close]

BLAST of Cmc07g0186321 vs. TAIR 10
Match: AT1G21720.1 (proteasome beta subunit C1 )

HSP 1 Score: 169.9 bits (429), Expect = 1.6e-42
Identity = 84/98 (85.71%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD++F+GLSGL TD QTLYQR
Sbjct: 7   NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQTLYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYL 112
           LV++HKLYQLREERDMKPETFASLVSA LYEKR   YL
Sbjct: 67  LVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYL 104

[Close]

BLAST of Cmc07g0186321 vs. TAIR 10
Match: AT1G77440.1 (20S proteasome beta subunit C2 )

HSP 1 Score: 168.3 bits (425), Expect = 4.8e-42
Identity = 84/98 (85.71%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD LF+GLSGL TD QTLYQR
Sbjct: 7   NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYL 112
           LV++HKLYQLREERDMKPETFASLVSA LYEKR   +L
Sbjct: 67  LVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFL 104

[Close]

BLAST of Cmc07g0186321 vs. TAIR 10
Match: AT1G77440.2 (20S proteasome beta subunit C2 )

HSP 1 Score: 168.3 bits (425), Expect = 4.8e-42
Identity = 84/98 (85.71%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD LF+GLSGL TD QTLYQR
Sbjct: 7   NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQR 66

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYL 112
           LV++HKLYQLREERDMKPETFASLVSA LYEKR   +L
Sbjct: 67  LVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFL 104

[Close]

BLAST of Cmc07g0186321 vs. TAIR 10
Match: AT3G60820.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 4.1e-09
Identity = 32/103 (31.07%), Postives = 50/103 (48.54%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NG   VA+ G +   IA+D R+      ++ D+ KI+++ D+  L  SG   D + L + 
Sbjct: 14  NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKV 73

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVITFL 117
           L  +H +YQ +  + M     A L+S  LY KR   Y     L
Sbjct: 74  LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVL 116

[Close]

BLAST of Cmc07g0186321 vs. TAIR 10
Match: AT3G60820.2 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 4.1e-09
Identity = 32/103 (31.07%), Postives = 50/103 (48.54%), Query Frame = 0


Query: 14  NGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQR 73
           NG   VA+ G +   IA+D R+      ++ D+ KI+++ D+  L  SG   D + L + 
Sbjct: 14  NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKV 73

Query: 74  LVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVITFL 117
           L  +H +YQ +  + M     A L+S  LY KR   Y     L
Sbjct: 74  LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVL 116

The following BLAST results are available for this feature:

BLAST of Cmc07g0186321 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466929.1	2.5e-69	99.28	PREDICTED: proteasome subunit beta type-3-like, partial [Cucumis melo]	[more]
KAA0061976.1	2.5e-53	78.95	proteasome subunit beta type-3-like [Cucumis melo var. makuwa]	[more]
KAA0055464.1	1.1e-43	96.91	E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis melo var. makuwa] >TYK0894...	[more]
XP_022939821.1	1.8e-43	95.88	proteasome subunit beta type-3-A [Cucurbita moschata] >XP_022993932.1 proteasome...	[more]
XP_023551487.1	1.8e-43	95.88	proteasome subunit beta type-3-A [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc07g0186321 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LST7	7.9e-42	84.54	Proteasome subunit beta type-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PBC1 ...	[more]
Q9XI05	2.3e-41	85.71	Proteasome subunit beta type-3-A OS=Arabidopsis thaliana OX=3702 GN=PBC1 PE=1 SV...	[more]
O81153	6.7e-41	85.71	Proteasome subunit beta type-3-B OS=Arabidopsis thaliana OX=3702 GN=PBC2 PE=1 SV...	[more]
O65084	1.3e-39	81.44	Proteasome subunit beta type-3 OS=Picea mariana OX=3335 GN=PBC1 PE=2 SV=1	[more]
Q55D66	1.2e-29	62.89	Proteasome subunit beta type-3 OS=Dictyostelium discoideum OX=44689 GN=psmB3 PE=...	[more]

BLAST of Cmc07g0186321 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CSI2	1.2e-69	99.28	proteasome subunit beta type-3-like OS=Cucumis melo OX=3656 GN=LOC103504292 PE=4...	[more]
A0A5A7V654	1.2e-53	78.95	Proteasome subunit beta type-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3CF09	5.1e-44	96.91	E3 ubiquitin ligase BIG BROTHER-related-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1JUA3	8.8e-44	95.88	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111489782 PE=3 SV=1	[more]
A0A6J1FGX2	8.8e-44	95.88	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111445581 PE=3 SV=1	[more]

BLAST of Cmc07g0186321 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21720.1	1.6e-42	85.71	proteasome beta subunit C1	[more]
AT1G77440.1	4.8e-42	85.71	20S proteasome beta subunit C2	[more]
AT1G77440.2	4.8e-42	85.71	20S proteasome beta subunit C2	[more]
AT3G60820.1	4.1e-09	31.07	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT3G60820.2	4.1e-09	31.07	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 13..116 e-value: 1.6E-20 score: 73.4
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 12..143 e-value: 9.0E-24 score: 86.1
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 12..116
None	No IPR available	PANTHER	PTHR11599:SF176	PROTEASOME SUBUNIT BETA	coord: 12..111
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 12..111
IPR016050	Proteasome beta-type subunit, conserved site	PROSITE	PS00854	PROTEASOME_BETA_1	coord: 19..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0186321.1	Cmc07g0186321.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019774	proteasome core complex, beta-subunit complex
cellular_component	GO:0005839	proteasome core complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0004298	threonine-type endopeptidase activity