Cmc06g0166631 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0166631
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr06: 19212459 .. 19217341 (+)
RNA-Seq Expression	Cmc06g0166631
Synteny	Cmc06g0166631

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGAATTTTTTTTTTAAAAAATTTCCCCTTCGATTTCTTCTCCTCTTCTTCAGTGTTATCGTATTCATCCCCTCCTCCTCCAGTGAACGTTAATGAGGCCACGGTAAAAGTTGCTTTTCCATTGGCTTTCTTCAGTTTTTCTTGGGACGTTGGAGCACGCCATTCTTTGGTGGCAGTTGAAGAGTCTGTGTAAACCTCTTCTCACCTTTTTTTTTTCTTCGTGACTCGATGTATACCTCTCCTCTGGTGAATGTAGGTGAGGCAACAGTGAACGTCGGAGCACGCCTTTCCATTGTCTTTCTTCGATCTGCCTTTCTTACAACTCAATTGTCATTGTCCAATTTCTTTGCCAAATCTCAATAGGTGATCACTCTCCCTTTCCTCTTGTATGTACTTTTTTTCTTTTTATCATTATACATATAAATTTATATAAATTTGTGGTAGATGTTGTATTCATGATATTAGGGTGTTTCTTAGCCTGTTTAAAAACTTTCTACCTTTCGGTTGTTTACTGATTTGTTTTATTCTGTGTTTGTTGAAATCAATTATATACCTTTGTCTACTGATTTTGATTGGATGTAGATTATTTCTATTATTGTCTGCTTATTCTTATCTTAGAATATGGAATAGTTTCATTGTTTTGGCCTAGGTTAACATGGAATTGTTGTGGATTAATGTGAAATTGTTAAGGTGTTTTAGGATGCTTTGCACATGTTTTATGCATGTTTAGTAAATTTCCTAGTCACTTATGTTTTATCTCACACACATCTCAGTCATTCCAAATTTTCATTAAGCATTTCGAAATTAAATTGCTACCCCTTCTAAGTCCTTTCGAGTGTTTTTATGCATATTTAGTTAGTCTCTTAGACACTTATGTTTTATCTTGTATATATCTCGCATATTTCAAACTTTCACTATGCATTTCAAAATAAAAAAAAAAATAGTAGAAACTAAATAAAACATGCATGGTTGCACCCTAAATAAGTATATGACTAATTCGACATTGAACATTTAAGGTTTGGAAGTTGCGAGATGTTTACGAGATTGCAAGATGCAAAAAATAGTGGTTAAAAGCACACTAAATCATTAGGTTTATACATTTAAGATCTAAATGTTCTACCAAGAGAAGAGGACAAAAAAAAAAAAACCTATATATAACACAATTCGGAGGAAAAAAAAAACAAAAAACAAAAAATTTAAAAACTTAATGGATAGCACGAGAGAATATTCTATAGAATGACAAGATAAATTCAAAAAATGGGAGTTTGAAAGAGGTTAGAGAGATTGGAAGGTTAGAGATCAAGAGGTTTGGTTTAAACAAATATTTTCTTTTTTTAATGTTATGTTTTAAGAAGGAAAGGAAATTTTCATTAAAAGCAAAATTGACGTTTCACCTTCATTTTGTCTTAAAATTCAACATTTTTTTCACATTCAATCCTAAAAGTCATACATTTTTTTCACATTCAATCCTAAAAGTCATTTACCTGCTAAAATTGGCCTATTTTTGGCCATTTCCTAAACTTTTTACATAAAATCTTTAAAGTTTGACAAATATAACATTTTGGTCAAATGTTTCAGTGACTCGTCCTAATGATCTTCAAAGGATGGGCTAAAACAAATACTTTAACTTGGCACATTTGATATTTGAACCACCAATGACTAAGAAAAGAAAAGAAAGGTAATGTTTTTGTGAAACAATTCCTTCTCCCAACAAACATTGAAAGCAAACCTGCGAATGGATTTTAGCTTTCGCTCCAAAAGAAGAGACTGCATAAAAAGGAATGAAAAAAATAATAATAAATCGATGCACCGATAAAGACATTTTTAGTTAAGAATACCATTATTGACAAAGCACCAAGAAACTGCAGCTAAAACATGAAATTTTGAAATTTTATTTCGATCTGAGGATTGATTGATGACACCAAAACGATTCATCTAAAATAATTGACACAAAAGTTACCTTCTTAGTTAAAGGTAGAAGACTTTTGATGATATTTCTGCCCTTATTCCTTTATTTATTCAATTTAAATCTATGATTAAAGAGAAAGATGCGCTAGAAGTTGAAAATATGTTTGGGAATGATTTAAAAAAGTTAGATCAATTTTGTCAAATCCAAAATCTCTGGAAAAAAACATGCAACTGTAAAAAACTTAATTTGGAAAGAAAGCAATCATCGCATTGGATTTTATAGACGAAGATTGAGTAGGGCAAGACAACTACAATCCCCATAAAGCTGAATATAAATACACATCTTCATTTGAAAAGTAGACCCTCCCAGCCCTAACTAGCAACCAAACAAGTGGGGTGCATAATGATATAATTGCTCTACCTGATATCTCTAACCTGCTGGTCAATAATACATGTTCTATATTCACATTGGCGAATTCATAAATCCTCCATTCCACCCCCATGACCACATCCCACAAGTACTCAGTAGTTTCAGGCTCTAACAATTCTCTTGAAAATAACAGAGGGAGGGCGGAACCTGGTTCCATTTCCTTTTCTCTATATTCCAAAATTGAACTTTTCACCGCACATAGAAGACATCAATCCATAAACAAAACATTACTCTTAACCATAACATCTCCTCACTGGCATTAACCAATTCAACTACCTAGAAAATAAGAGCGGGTTTCATTCTCTTTTCTTATTGGATGGGAAATGCTATATTTCATTCTGAAATTGAATTTTTCTTTAACAAGATAAGATAATCCCATTCCAAAACCATCCAGGGAGGATTTGGGTTTACATGATATGTAAGGAACAAATAATTGCTTGAACAAAAGCAATCTCTGCCCCCACCCTAACAGACCTACCTAATTTGGGTTTCCAGAGGAGTAACAAGGGTACATATTCATCAACTGATCCTTACACTTCCAAGGTAAATACATGAGAATCAAGCTCCTAGAGAAAACAAACATCGTCCCTCAGCATTTCACACTTAGCTCTAAGTTTGAGAAACCAAGCATGTTAAAGTTCTAGTAGTCAAAGTAATTCAATAAGAAAACATGAGTGCAAACTCAAGAAAGAGAGAAATTATCTTTCAAATTTCAAGTATCGTCCCTTTTTACAGTGCACATGCTGTGATTCCAGTATCACATTCAAGTGAAGGGATACCAAAAGGGATCAGATTCAAAATAAAGCAATGATATCCCCACAGAAAGCATACAGTTCAAAAAGCAATAAAGTAAGGATGAAATCTTGCACTACGATATAATCAAGTATGAAGGCCCACAGCATGTTTGGTATATTCAAGGAGAAACTGAAGCGCTGAAACCAGTCAAATCAAGATAGCTACTCTTTCTAAGTAGAAGTACCTGAATATCTTGTAAAAGGTTCATTTGGGAGGGAGGGGGGGGGTCAGATTATACAAAGAAAAATTTGTTGATACTGAGAAGCAGAAAATAAAAATGCTCAAAATATTTGATTGCAATGACCAGCACAACTACAACAAGAACAAAAAGTTGAAGAAAAAACCAACCAAATAAAGAGATTAAGCTTGATTGCCCGTCAATGCTTTCATCTGTATATGATTGTTGTCCCCACCAATAGCAGCAGCTGGTAAAGCTTCATAAGACCCAACTCTCCGAACGCCAACAGTCTTGGCAATGACAGCATAAATGACAATTACAATGAGCAGAACAAACATAACATGGATCAGAAAAGCAAGATCCAAAATGGCAACAGCCCTGAGCCGGGATTCCTCCAAATCGCACTTGGTGGATCCCTCCACGCCACTCACCACATCCAGCAACCTGTGACACCCTTCAGGAATGAAGGCTTCGACATAGAGCGAAAGCCCCGTCTGCAGCACCCAAAGACCCTGGAGGAAGAACGTCGCCCCCAAACCCACATCGGCGACGAAGAGCCTGGGCAAACAAGCAAGGACCAGGCAGAGGAAGGAGGCCAGGGCGGAGATCTTACCGGAGACAGAATCACATTTGGCTTGAAGATCGGAAGTCTGAACAGAAGCAGCTGAGGAAGAAACAGAGTATTGCAAGAAGAAAAGAGCGGAGGCTAGGGCAAAGAAGAGATCGGAAGGGAGAGGGAGAAGAGAGGTGGAGTCGGAGAGGAGAATGGCGAGCGTTAGAATGAGAAAGAGGAAGATGACGGCGGCTGATTGAAGAGAAATGAAATGGTGAACAGGGGTGCTACCCTTGAGAAGAGGGTCAGGGTCGGCGGCGACAATGGCTTGATGGGCAAAGGCGATAACGAGACATGGGATTGAGAGATAGAGTTGCAGGTAACGGAGGCCGTAGTGATGGTGATGCTGATGATGGGGAAGATGAAGCTGATGCGAGGAAGACGGCGGGAAAGGATGGTAGGGCCTGGCGGAATAGGACAGAGGGGATTTAAGGAAATTGAGGGTAACGGAGACGATGTGGTAAAGGCCAAGGGAGAGGAGCGCCGAGGATGAGAAAACATGGAAGATCATAGCAGCCATTGTTCTCTCTCTCTCTGACTCAAAATATAGAGAGAGAAGCCAGTTTCAGATTTAGGGTCTGATTCAGATCCGGAAGGTTAGAAACATATTGGATAGTGGGTGGAGTTTTAGGGAATAGTTGGTGAAGGGAGGATAGGAAGTGGTTTGTTACTGGCGTCGTCGGAGCCGGAGGAAGCTGCCGTGAGTAGGTTGAAGAAGAAGAGGGGGAATCTGCAGGAACAGTTGAAGGAGACGGAGAACTGGTCGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGGTTGTTTCTGTCAGCAACAGCCTAAGAAATGCATTACATTGAGTCCTTTCATTACTTTCTCCCTCTCTTTGTATTTGCTATGAAACAAAATTAAATTATAAATTATGAAAAAATAGCAGCATTTTTTTTTAATTAATATAATAAAATAAACTTAGCTTAT

mRNA sequence

CCTGAATTTTTTTTTTAAAAAATTTCCCCTTCGATTTCTTCTCCTCTTCTTCAGTGTTATCGTATTCATCCCCTCCTCCTCCAGTGAACGTTAATGAGGCCACGGTAAAAGTTGCTTTTCCATTGGCTTTCTTCAGTTTTTCTTGGGACGTTGGAGCACGCCATTCTTTGGTGGCAGTTGAAGAGTCTGTGTAAACCTCTTCTCACCTTTTTTTTTTCTTCGTGACTCGATGTATACCTCTCCTCTGGTGAATGTAGGTGAGGCAACAGTGAACGTCGGAGCACGCCTTTCCATTGTCTTTCTTCGATCTGCCTTTCTTACAACTCAATTGTCATTGTCCAATTTCTTTGCCAAATCTCAATAGTGCACATGCTGTGATTCCAGTATCACATTCAAGTGAAGGGATACCAAAAGGGATCAGATTCAAAATAAAGCAATGATATCCCCACAGAAAGCATACAGTTCAAAAAGCAATAAAGTAAGGATGAAATCTTGCACTACGATATAATCAAGTATGAAGGCCCACAGCATGTTTGGTATATTCAAGGAGAAACTGAAGCGCTGAAACCAGTCAAATCAAGATAGCTACTCTTTCTAAGTAGAAGTACCTGAATATCTTGTAAAAGGTTCATTTGGGAGGGAGGGGGGGGGTCAGATTATACAAAGAAAAATTTGTTGATACTGAGAAGCAGAAAATAAAAATGCTCAAAATATTTGATTGCAATGACCAGCACAACTACAACAAGAACAAAAAGTTGAAGAAAAAACCAACCAAATAAAGAGATTAAGCTTGATTGCCCGTCAATGCTTTCATCTGTATATGATTGTTGTCCCCACCAATAGCAGCAGCTGGTAAAGCTTCATAAGACCCAACTCTCCGAACGCCAACAGTCTTGGCAATGACAGCATAAATGACAATTACAATGAGCAGAACAAACATAACATGGATCAGAAAAGCAAGATCCAAAATGGCAACAGCCCTGAGCCGGGATTCCTCCAAATCGCACTTGGTGGATCCCTCCACGCCACTCACCACATCCAGCAACCTGTGACACCCTTCAGGAATGAAGGCTTCGACATAGAGCGAAAGCCCCGTCTGCAGCACCCAAAGACCCTGGAGGAAGAACGTCGCCCCCAAACCCACATCGGCGACGAAGAGCCTGGGCAAACAAGCAAGGACCAGGCAGAGGAAGGAGGCCAGGGCGGAGATCTTACCGGAGACAGAATCACATTTGGCTTGAAGATCGGAAGTCTGAACAGAAGCAGCTGAGGAAGAAACAGAGTATTGCAAGAAGAAAAGAGCGGAGGCTAGGGCAAAGAAGAGATCGGAAGGGAGAGGGAGAAGAGAGGTGGAGTCGGAGAGGAGAATGGCGAGCGTTAGAATGAGAAAGAGGAAGATGACGGCGGCTGATTGAAGAGAAATGAAATGGTGAACAGGGGTGCTACCCTTGAGAAGAGGGTCAGGGTCGGCGGCGACAATGGCTTGATGGGCAAAGGCGATAACGAGACATGGGATTGAGAGATAGAGTTGCAGGTAACGGAGGCCGTAGTGATGGTGATGCTGATGATGGGGAAGATGAAGCTGATGCGAGGAAGACGGCGGGAAAGGATGGTAGGGCCTGGCGGAATAGGACAGAGGGGATTTAAGGAAATTGAGGGTAACGGAGACGATGTGGTAAAGGCCAAGGGAGAGGAGCGCCGAGGATGAGAAAACATGGAAGATCATAGCAGCCATTGTTCTCTCTCTCTCTGACTCAAAATATAGAGAGAGAAGCCAGTTTCAGATTTAGGGTCTGATTCAGATCCGGAAGGTTAGAAACATATTGGATAGTGGGTGGAGTTTTAGGGAATAGTTGGTGAAGGGAGGATAGGAAGTGGTTTGTTACTGGCGTCGTCGGAGCCGGAGGAAGCTGCCGTGAGTAGGTTGAAGAAGAAGAGGGGGAATCTGCAGGAACAGTTGAAGGAGACGGAGAACTGGTCGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGGTTGTTTCTGTCAGCAACAGCCTAAGAAATGCATTACATTGAGTCCTTTCATTACTTTCTCCCTCTCTTTGTATTTGCTATGAAACAAAATTAAATTATAAATTATGAAAAAATAGCAGCATTTTTTTTTAATTAATATAATAAAATAAACTTAGCTTAT

Coding sequence (CDS)

ATGGATCAGAAAAGCAAGATCCAAAATGGCAACAGCCCTGAGCCGGGATTCCTCCAAATCGCACTTGGTGGATCCCTCCACGCCACTCACCACATCCAGCAACCTGTGACACCCTTCAGGAATGAAGGCTTCGACATAGAGCGAAAGCCCCGTCTGCAGCACCCAAAGACCCTGGAGGAAGAACGTCGCCCCCAAACCCACATCGGCGACGAAGAGCCTGGGCAAACAAGCAAGGACCAGGCAGAGGAAGGAGGCCAGGGCGGAGATCTTACCGGAGACAGAATCACATTTGGCTTGAAGATCGGAAGTCTGAACAGAAGCAGCTGA

Protein sequence

MDQKSKIQNGNSPEPGFLQIALGGSLHATHHIQQPVTPFRNEGFDIERKPRLQHPKTLEEERRPQTHIGDEEPGQTSKDQAEEGGQGGDLTGDRITFGLKIGSLNRSS

Homology

[Close]

BLAST of Cmc06g0166631 vs. NCBI nr
Match: KAE8021253.1 (hypothetical protein FH972_007160 [Carpinus fangiana])

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-06
Identity = 25/47 (53.19%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 1  MDQKSKIQNGNSPEPGFLQIALGGSLHATHHIQQPVTPFRNEGFDIE 48
          ++Q+ +IQN + P+PG L++ALGG+LHA HH++QPVT   NEG  +E
Sbjct: 45 VNQEDQIQNCHGPQPGILELALGGALHAAHHVEQPVTALWNEGVYVE 91

[Close]

BLAST of Cmc06g0166631 vs. NCBI nr
Match: PPS00143.1 (hypothetical protein GOBAR_AA20518 [Gossypium barbadense])

HSP 1 Score: 55.8 bits (133), Expect = 2.6e-04
Identity = 33/105 (31.43%), Postives = 49/105 (46.67%), Query Frame = 0


Query: 1   MDQKSKIQNGNSPEPGFLQIALGGSLHATHHIQQPVTPFRNEGFDIERKPRLQHPKTLEE 60
           M+ + +IQNG+SPEPGF+++A G SL   H++QQ +  F                     
Sbjct: 1   MNHEHQIQNGHSPEPGFVEVAFGRSLDTAHNVQQLMAAF--------------------- 60

Query: 61  ERRPQTHIGDEEPGQTSKDQAEEGGQGGDLTGDRITFGLKIGSLN 106
                            +D+A +G Q G+  G RITFGL+I  L+
Sbjct: 61  ----------------GQDEAHQGSQSGNAGGQRITFGLEIRGLD 68

[Close]

BLAST of Cmc06g0166631 vs. ExPASy TrEMBL
Match: A0A5N6QUJ2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007160 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06
Identity = 25/47 (53.19%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 1  MDQKSKIQNGNSPEPGFLQIALGGSLHATHHIQQPVTPFRNEGFDIE 48
          ++Q+ +IQN + P+PG L++ALGG+LHA HH++QPVT   NEG  +E
Sbjct: 45 VNQEDQIQNCHGPQPGILELALGGALHAAHHVEQPVTALWNEGVYVE 91

[Close]

BLAST of Cmc06g0166631 vs. ExPASy TrEMBL
Match: A0A2P5X9Y1 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA20518 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.3e-04
Identity = 33/105 (31.43%), Postives = 49/105 (46.67%), Query Frame = 0


Query: 1   MDQKSKIQNGNSPEPGFLQIALGGSLHATHHIQQPVTPFRNEGFDIERKPRLQHPKTLEE 60
           M+ + +IQNG+SPEPGF+++A G SL   H++QQ +  F                     
Sbjct: 1   MNHEHQIQNGHSPEPGFVEVAFGRSLDTAHNVQQLMAAF--------------------- 60

Query: 61  ERRPQTHIGDEEPGQTSKDQAEEGGQGGDLTGDRITFGLKIGSLN 106
                            +D+A +G Q G+  G RITFGL+I  L+
Sbjct: 61  ----------------GQDEAHQGSQSGNAGGQRITFGLEIRGLD 68

The following BLAST results are available for this feature:

BLAST of Cmc06g0166631 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8021253.1	2.8e-06	53.19	hypothetical protein FH972_007160 [Carpinus fangiana]	[more]
PPS00143.1	2.6e-04	31.43	hypothetical protein GOBAR_AA20518 [Gossypium barbadense]	[more]

BLAST of Cmc06g0166631 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc06g0166631 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N6QUJ2	1.3e-06	53.19	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007160 PE=4 SV=1	[more]
A0A2P5X9Y1	1.3e-04	31.43	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA20518 PE=4 SV...	[more]

BLAST of Cmc06g0166631 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0166631.1	Cmc06g0166631.1	mRNA