Cmc03g0069091 (gene) Melon (Charmono) v1.1

Overview
NameCmc03g0069091
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationCMiso1.1chr03: 13712850 .. 13713950 (-)
RNA-Seq ExpressionCmc03g0069091
SyntenyCmc03g0069091
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTATAATTTTAATAAGCCTGGTCATCGGTGCATCCTGCCATGTCTGCAACGACCTTAGTCTTTTTAGAAAATTTAATGAAGTTAAGGATAAAAATATCCTTCTAAAAGATCATCACACAACCAAGGTGACCGGTATTGGAGAATTAGAACTAAAATTCACATCCGGTAAGACGCTTGTGCTGAAGGAAGTTCTGCATACTCCAGAAATTCGAAAGAATTTGGTCTCCGGATATCTCCTCAACAAAGTTGGATTCACACAAACCATAGGATCAGACTTGTTTACTTTAACTAAAAACAATGTATTTGTGGGGAAGGGTTACGCTACTGATGGTATGTTCAAATTGGATCTGGAAATTAATAAGATTGCATCTTCTGCTTACATGTTGACTTCTTTTAATGTTTGGCATGCTATACTTTGTCATGTTAATAAAAGATTAATTAGTAACATAAGTAGGTTAAATCTTATACCTAAGTTATCTCTGCATGATTTTGAGAAATGTGCATGTTGTAGTCAAGCTAAGATAATTAAAACCTCGCATAAGTCTGTAACTAGAGTAACGGAGCCTTTAGAATTAATTCATTCTGACTTATGCGAATTTGATGGCACTTTAACTAGAAACAGTAAAAGGTATGTAGTTACCTTTATAGATGACTGTTCTGACTACACTTTTATTTATCTGCTTAAAAATAAAAGTGATGCTTATGAAATGTTCAAAGTCTTTGTAACAGAAATAGAGAACCAATTTAACAAAAGAATTAAGAGACTTCGTAGTGATAGAGGAACTGAATATGATTCAGTTGCTTTCAATGAATTTTATAACTCAAAAAGAATAATACATGAAACTACTGTGCCTTATTCTCCTGAAATTAATGGAAAAGCAGAAAGAAAGAATAGAACTCTAACTGAGTTAGTAGTTGCTATCTTACTTGAGTCAGGAGCAACACTATATTGGTGGGGTGAAATAATTAAGACTGTTAATTATGTTCTTAATAGGGTTCCTAAATCTAACAGTAAAACTTCACCATGCGAAGTCCTTAAACATAAAACACCAAACTTGACTTATCTTAGAACTTGGGGGTCTAGCTTATGTTAG

mRNA sequence

ATGGTTGTTATAATTTTAATAAGCCTGGTCATCGGTGCATCCTGCCATGTCTGCAACGACCTTAGTCTTTTTAGAAAATTTAATGAAGTTAAGGATAAAAATATCCTTCTAAAAGATCATCACACAACCAAGGTGACCGGTATTGGAGAATTAGAACTAAAATTCACATCCGGTAAGACGCTTGTGCTGAAGGAAGTTCTGCATACTCCAGAAATTCGAAAGAATTTGGTCTCCGGATATCTCCTCAACAAAGTTGGATTCACACAAACCATAGGATCAGACTTGTTTACTTTAACTAAAAACAATGTATTTGTGGGGAAGGGTTACGCTACTGATGGTATGTTCAAATTGGATCTGGAAATTAATAAGATTGCATCTTCTGCTTACATGTTGACTTCTTTTAATGTTTGGCATGCTATACTTTGTCATGTTAATAAAAGATTAATTAGTAACATAAGTAGGTTAAATCTTATACCTAAGTTATCTCTGCATGATTTTGAGAAATGTGCATGTTGTAGTCAAGCTAAGATAATTAAAACCTCGCATAAGTCTGTAACTAGAGTAACGGAGCCTTTAGAATTAATTCATTCTGACTTATGCGAATTTGATGGCACTTTAACTAGAAACAGTAAAAGGTATGTAGTTACCTTTATAGATGACTGTTCTGACTACACTTTTATTTATCTGCTTAAAAATAAAAGTGATGCTTATGAAATGTTCAAAGTCTTTGTAACAGAAATAGAGAACCAATTTAACAAAAGAATTAAGAGACTTCGTAGTGATAGAGGAACTGAATATGATTCAGTTGCTTTCAATGAATTTTATAACTCAAAAAGAATAATACATGAAACTACTGTGCCTTATTCTCCTGAAATTAATGGAAAAGCAGAAAGAAAGAATAGAACTCTAACTGAGTTAGTAGTTGCTATCTTACTTGAGTCAGGAGCAACACTATATTGGTGGGGTGAAATAATTAAGACTGTTAATTATGTTCTTAATAGGGTTCCTAAATCTAACAGTAAAACTTCACCATGCGAAGTCCTTAAACATAAAACACCAAACTTGACTTATCTTAGAACTTGGGGGTCTAGCTTATGTTAG

Coding sequence (CDS)

ATGGTTGTTATAATTTTAATAAGCCTGGTCATCGGTGCATCCTGCCATGTCTGCAACGACCTTAGTCTTTTTAGAAAATTTAATGAAGTTAAGGATAAAAATATCCTTCTAAAAGATCATCACACAACCAAGGTGACCGGTATTGGAGAATTAGAACTAAAATTCACATCCGGTAAGACGCTTGTGCTGAAGGAAGTTCTGCATACTCCAGAAATTCGAAAGAATTTGGTCTCCGGATATCTCCTCAACAAAGTTGGATTCACACAAACCATAGGATCAGACTTGTTTACTTTAACTAAAAACAATGTATTTGTGGGGAAGGGTTACGCTACTGATGGTATGTTCAAATTGGATCTGGAAATTAATAAGATTGCATCTTCTGCTTACATGTTGACTTCTTTTAATGTTTGGCATGCTATACTTTGTCATGTTAATAAAAGATTAATTAGTAACATAAGTAGGTTAAATCTTATACCTAAGTTATCTCTGCATGATTTTGAGAAATGTGCATGTTGTAGTCAAGCTAAGATAATTAAAACCTCGCATAAGTCTGTAACTAGAGTAACGGAGCCTTTAGAATTAATTCATTCTGACTTATGCGAATTTGATGGCACTTTAACTAGAAACAGTAAAAGGTATGTAGTTACCTTTATAGATGACTGTTCTGACTACACTTTTATTTATCTGCTTAAAAATAAAAGTGATGCTTATGAAATGTTCAAAGTCTTTGTAACAGAAATAGAGAACCAATTTAACAAAAGAATTAAGAGACTTCGTAGTGATAGAGGAACTGAATATGATTCAGTTGCTTTCAATGAATTTTATAACTCAAAAAGAATAATACATGAAACTACTGTGCCTTATTCTCCTGAAATTAATGGAAAAGCAGAAAGAAAGAATAGAACTCTAACTGAGTTAGTAGTTGCTATCTTACTTGAGTCAGGAGCAACACTATATTGGTGGGGTGAAATAATTAAGACTGTTAATTATGTTCTTAATAGGGTTCCTAAATCTAACAGTAAAACTTCACCATGCGAAGTCCTTAAACATAAAACACCAAACTTGACTTATCTTAGAACTTGGGGGTCTAGCTTATGTTAG

Protein sequence

MVVIILISLVIGASCHVCNDLSLFRKFNEVKDKNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTPEIRKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIASSAYMLTSFNVWHAILCHVNKRLISNISRLNLIPKLSLHDFEKCACCSQAKIIKTSHKSVTRVTEPLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKAERKNRTLTELVVAILLESGATLYWWGEIIKTVNYVLNRVPKSNSKTSPCEVLKHKTPNLTYLRTWGSSLC
Homology
[Close]
BLAST of Cmc03g0069091 vs. NCBI nr
Match: KAA0034938.1 (putative Polyprotein [Cucumis melo var. makuwa] >TYK21293.1 putative Polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 644.8 bits (1662), Expect = 4.4e-181
Identity = 319/351 (90.88%), Postives = 331/351 (94.30%), Query Frame = 0 

Query: 12  GASCHVCNDLSLFRKFNEVKDKNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTPE 71
           GAS HVC++LSLFRK+NEVKDKNILL DHHTTKV GIGE+ELKFTS KTLV+KE LHTPE
Sbjct: 176 GASHHVCHELSLFRKYNEVKDKNILLGDHHTTKVVGIGEVELKFTSDKTLVVKEGLHTPE 235

Query: 72  IRKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIASSAYML 131
           IRKNLV GYLLNK GFTQTIGS+LFTLTKNNVFVGKGYATDGMFKL+LEINKIASSAYML
Sbjct: 236 IRKNLVFGYLLNKAGFTQTIGSNLFTLTKNNVFVGKGYATDGMFKLNLEINKIASSAYML 295

Query: 132 TSFNVWHAILCHVNKRLISNISRLNLIPKLSLHDFEKCACCSQAKIIKTSHKSVTRVTEP 191
           TSFNVWHA LCHVNKRLISN+SRLNLIPKLSLHDFEKCACCSQAKI KTSHK VTRVT+P
Sbjct: 296 TSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKTSHKFVTRVTKP 355

Query: 192 LELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIENQF 251
           LELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIENQF
Sbjct: 356 LELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIENQF 415

Query: 252 NKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKAERKNRTLTELVVAIL 311
           NKRIKRLRSDRGTEYDSVAFNEFYNSK IIHETT PYSPE+NGK ERKNRTLTEL VAIL
Sbjct: 416 NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTTPYSPEMNGKEERKNRTLTELAVAIL 475

Query: 312 LESGATLYWWGEIIKTVNYVLNRVPKSNSKTSPCEVLKHKTPNLTYLRTWG 363
           LES A   WWGEIIKTVNYVLNR+PKSNSKTSP EVLKHK PNL+YLRTWG
Sbjct: 476 LESEAAPSWWGEIIKTVNYVLNRIPKSNSKTSPYEVLKHKIPNLSYLRTWG 526

[Close]
BLAST of Cmc03g0069091 vs. NCBI nr
Match: ABI34306.1 (Polyprotein, putative [Solanum demissum])

HSP 1 Score: 398.3 bits (1022), Expect = 7.2e-107
Identity = 197/352 (55.97%), Postives = 251/352 (71.31%), Query Frame = 0 

Query: 12  GASCHVCNDLSLFRKFNEVKD-KNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTP 71
           GA+ HVC D   F+K+   ++ K I+L D HTT+V G G++EL FTSG+ L LK+VL+TP
Sbjct: 315 GANRHVCYDKDWFKKYTHFEEPKTIMLGDSHTTQVLGTGDVELCFTSGRVLTLKDVLYTP 374

Query: 72  EIRKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIASSAYM 131
            +RK L+S +LLNK GF Q I S+ + + K  +FVGKGYA DGMFKL++E+NK ++S YM
Sbjct: 375 SMRKKLMSSFLLNKAGFKQIIESNQYVIVKKGIFVGKGYACDGMFKLNVEMNKTSTSVYM 434

Query: 132 LTSFNVWHAILCHVNKRLISNISRLNLIPKLSLHDFEKCACCSQAKIIKTSHKSVTRVTE 191
           L+S N WHA LCH+N R +  +S L LIP +   +FEKC  CS+AKI K  H  V R T+
Sbjct: 435 LSSTNFWHARLCHINDRYVGIMSSLGLIPMIK-KNFEKCEACSKAKITKRPHFQVERKTD 494

Query: 192 PLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIENQ 251
            LEL+H+D+CE  G LTR   RY +TFIDD S +T++YL+KNKSDA+E FK ++ E+ENQ
Sbjct: 495 LLELVHTDICELGGILTRGGNRYFITFIDDFSKFTYVYLMKNKSDAFENFKTYLHEVENQ 554

Query: 252 FNKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKAERKNRTLTELVVAI 311
           F ++IKR+RSDRG EY+S  FN F  S  IIHETT PYSP  NG AERKNRTL EL  A+
Sbjct: 555 FGRKIKRIRSDRGREYESNEFNSFVRSLGIIHETTPPYSPSSNGVAERKNRTLVELTNAM 614

Query: 312 LLESGATLYWWGEIIKTVNYVLNRVPKSNSKTSPCEVLKHKTPNLTYLRTWG 363
           L+ES A L +WGE I T  YVLNRVP   SK +P E+ K   P+L YLR WG
Sbjct: 615 LIESHAPLNFWGEAILTACYVLNRVPHKKSKLTPFELWKGYKPSLGYLRVWG 665

[Close]
BLAST of Cmc03g0069091 vs. NCBI nr
Match: KAA0046026.1 (putative Polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 369.0 bits (946), Expect = 4.7e-98
Identity = 183/201 (91.04%), Postives = 192/201 (95.52%), Query Frame = 0 

Query: 12  GASCHVCNDLSLFRKFNEVKDKNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTPE 71
           GAS HVC+DLSLFRK+NEVKDKNILL DHHTTKVTGI E++LKFTSGKTLVLKEVLHTPE
Sbjct: 41  GASRHVCHDLSLFRKYNEVKDKNILLGDHHTTKVTGIEEVKLKFTSGKTLVLKEVLHTPE 100

Query: 72  IRKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIASSAYML 131
           IRKNLVS YLLNK GFTQTIGS+LFTLTKNNV+VGKGYATDGMFKL+LEINKIASSAYML
Sbjct: 101 IRKNLVSRYLLNKAGFTQTIGSNLFTLTKNNVYVGKGYATDGMFKLNLEINKIASSAYML 160

Query: 132 TSFNVWHAILCHVNKRLISNISRLNLIPKLSLHDFEKCACCSQAKIIKTSHKSVTRVTEP 191
           TSFNVWHA LCHVNKRLISN+SRLNLIPKLSLHDFEKCACCSQAKI +TSHKSVT VT P
Sbjct: 161 TSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITETSHKSVTIVTGP 220

Query: 192 LELIHSDLCEFDGTLTRNSKR 213
           LELIHSDLCEFDGTLTRNSKR
Sbjct: 221 LELIHSDLCEFDGTLTRNSKR 241

[Close]
BLAST of Cmc03g0069091 vs. NCBI nr
Match: KAA0055815.1 (putative Polyprotein [Cucumis melo var. makuwa] >TYK10066.1 putative Polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 350.9 bits (899), Expect = 1.3e-92
Identity = 182/224 (81.25%), Postives = 193/224 (86.16%), Query Frame = 0 

Query: 12  GASCHVCNDLSLFRKFNEVKDKNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTPE 71
           GAS HV +DLSLFRK+NEVKDKNILL DHH TKV GIGE+ELKFTSGKTLVLKEVLHT E
Sbjct: 152 GASRHVYHDLSLFRKYNEVKDKNILLGDHHRTKVVGIGEVELKFTSGKTLVLKEVLHTSE 211

Query: 72  IRKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIASSAYML 131
            RKNLVSGYLLNK G TQTIG DLFTLTKNNVFVGKGYATD MFKL+L+INKIASSAYML
Sbjct: 212 FRKNLVSGYLLNKDGSTQTIGFDLFTLTKNNVFVGKGYATDDMFKLNLKINKIASSAYML 271

Query: 132 TSFNVWHAILCHVNKRLISNISRLNLIPKLSLHDFEKCACCSQAKIIKTSHKSVTRVTEP 191
           T FN WHA LCHVNKRLISN+SRLNLIPKLSLHDFEKCA CSQAKI KT HKSVTRVTEP
Sbjct: 272 TFFNDWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCARCSQAKITKTLHKSVTRVTEP 331

Query: 192 LELIHSDLCEFDGTLTRNSKR--YVVTFIDDCSDYTFIYLLKNK 234
           LELIHSDLCEFDGTLTRNSKR  ++V     C      ++L+ K
Sbjct: 332 LELIHSDLCEFDGTLTRNSKRTWHLVDLPTGCKAIGCKWVLRKK 375

[Close]
BLAST of Cmc03g0069091 vs. NCBI nr
Match: XP_021732277.1 (uncharacterized protein LOC110699091 [Chenopodium quinoa])

HSP 1 Score: 345.9 bits (886), Expect = 4.3e-91
Identity = 180/312 (57.69%), Postives = 214/312 (68.59%), Query Frame = 0 

Query: 12  GASCHVCNDLSLFRKFNE-VKDKNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTP 71
           GA+ HVC D  +F+ + E   DK +LL D H+T + G+G +ELKFTSG+TL+LK+VLHTP
Sbjct: 505 GATRHVCYDRRMFKTYTEKTDDKKVLLGDSHSTNIAGVGNVELKFTSGRTLILKDVLHTP 564

Query: 72  EIRKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIASSAYM 131
           E+RKNLVSG+LLNK GF QTIGSDLFTLTKN +FVGKGYATDGMFKL++E+NKI++SAYM
Sbjct: 565 EMRKNLVSGFLLNKAGFIQTIGSDLFTLTKNGIFVGKGYATDGMFKLNVEVNKISNSAYM 624

Query: 132 LTS-FNVWHAILCHVNKRLISNISRLNLIPKLSLHDFEKCACCSQAKIIKTSHKSVTRVT 191
           L S  NVWH  LCHVNKRLI N+S L LIP +SL+DF+KC  CSQAKI KT HKSV R +
Sbjct: 625 LCSTINVWHTRLCHVNKRLIKNMSNLGLIPNISLNDFDKCDSCSQAKITKTPHKSVIRNS 684

Query: 192 EPLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIEN 251
           EPL+LIHSD+CE +GTLTRN +RY +TFIDDCSDYT IYL+KNKSDA+EM          
Sbjct: 685 EPLDLIHSDICELNGTLTRNGQRYFITFIDDCSDYTCIYLMKNKSDAFEM---------- 744

Query: 252 QFNKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKAERKNRTLTELVVA 311
                                                         AERKNRT TELVVA
Sbjct: 745 ----------------------------------------------AERKNRTFTELVVA 760

Query: 312 ILLESGATLYWW 322
           I L SGA  +W+
Sbjct: 805 ISLYSGAADHWF 760

[Close]
BLAST of Cmc03g0069091 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-44
Identity = 111/353 (31.44%), Postives = 192/353 (54.39%), Query Frame = 0 

Query: 13  ASCHVCNDLSLFRKFNEVKDKNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTPEI 72
           AS H      LF ++       + + +   +K+ GIG++ +K   G TLVLK+V H P++
Sbjct: 300 ASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDL 359

Query: 73  RKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEI-NKIASSAYML 132
           R NL+SG  L++ G+     +  + LTK ++ + KG A   +++ + EI     ++A   
Sbjct: 360 RMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDE 419

Query: 133 TSFNVWHAILCHVNKRLISNISRLNLIPKLSLHDFEKCACCSQAKIIKTSHK-SVTRVTE 192
            S ++WH  + H++++ +  +++ +LI        + C  C   K  + S + S  R   
Sbjct: 420 ISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLN 479

Query: 193 PLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIENQ 252
            L+L++SD+C      +    +Y VTFIDD S   ++Y+LK K   +++F+ F   +E +
Sbjct: 480 ILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERE 539

Query: 253 FNKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKAERKNRTLTELVVAI 312
             +++KRLRSD G EY S  F E+ +S  I HE TVP +P+ NG AER NRT+ E V ++
Sbjct: 540 TGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSM 599

Query: 313 LLESGATLYWWGEIIKTVNYVLNRVPK-SNSKTSPCEVLKHKTPNLTYLRTWG 363
           L  +     +WGE ++T  Y++NR P    +   P  V  +K  + ++L+ +G
Sbjct: 600 LRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFG 652

[Close]
BLAST of Cmc03g0069091 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-37
Identity = 120/371 (32.35%), Postives = 181/371 (48.79%), Query Frame = 0 

Query: 12  GASCHVCNDLSLFRKFNEVKD--KNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHT 71
           GAS H+ ND SL+    EV    K  + K       T  G + L+  +   + L++VL  
Sbjct: 294 GASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLR--NDHEITLEDVLFC 353

Query: 72  PEIRKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIASS-- 131
            E   NL+S   L + G +        T++KN + V K     GM      IN  A S  
Sbjct: 354 KEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVK---NSGMLNNVPVINFQAYSIN 413

Query: 132 AYMLTSFNVWHAILCHVNKRLISNISRLNLIP--------KLSLHDFEKCACCSQAKIIK 191
           A    +F +WH    H++   +  I R N+          +LS    E C    QA++  
Sbjct: 414 AKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPF 473

Query: 192 TSHKSVTRVTEPLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEM 251
              K  T +  PL ++HSD+C     +T + K Y V F+D  + Y   YL+K KSD + M
Sbjct: 474 KQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSM 533

Query: 252 FKVFVTEIENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKAERK 311
           F+ FV + E  FN ++  L  D G EY S    +F   K I +  TVP++P++NG +ER 
Sbjct: 534 FQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERM 593

Query: 312 NRTLTELVVAILLESGATL--YWWGEIIKTVNYVLNRVPKS---NSKTSPCEVLKHKTPN 366
            RT+TE   A  + SGA L   +WGE + T  Y++NR+P     +S  +P E+  +K P 
Sbjct: 594 IRTITE--KARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPY 653

[Close]
BLAST of Cmc03g0069091 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.6e-30
Identity = 106/367 (28.88%), Postives = 181/367 (49.32%), Query Frame = 0 

Query: 12  GASCHVC---NDLSLFRKFNEVKDKNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLH 71
           GA+ H+    N+LS  + +    D  +++ D  T  +T  G   L  TS ++L L +VL+
Sbjct: 315 GATHHITSDFNNLSFHQPYTGGDD--VMIADGSTIPITHTGSASLP-TSSRSLDLNKVLY 374

Query: 72  TPEIRKNLVSGYLL---NKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIA 131
            P I KNL+S Y L   N+V       S         V + +G   D +++  +  ++  
Sbjct: 375 VPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAV 434

Query: 132 S---SAYMLTSFNVWHAILCHVNKRLISNISRLNLIPKLS-LHDFEKCACCSQAKIIKTS 191
           S   S     + + WH+ L H +  +++++   + +P L+  H    C+ C     I  S
Sbjct: 435 SMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDC----FINKS 494

Query: 192 HK-----SVTRVTEPLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDA 251
           HK     S    ++PLE I+SD+      L+ ++ RY V F+D  + YT++Y LK KS  
Sbjct: 495 HKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQV 554

Query: 252 YEMFKVFVTEIENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKA 311
            + F +F + +EN+F  RI  L SD G E+  V   ++ +   I H T+ P++PE NG +
Sbjct: 555 KDTFIIFKSLVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGLS 614

Query: 312 ERKNRTLTELVVAILLESGATLYWWGEIIKTVNYVLNRVPKSNSK-TSPCEVLKHKTPNL 363
           ERK+R + E+ + +L  +     +W        Y++NR+P    +  SP + L  + PN 
Sbjct: 615 ERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNY 671

[Close]
BLAST of Cmc03g0069091 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.7e-30
Identity = 112/366 (30.60%), Postives = 175/366 (47.81%), Query Frame = 0 

Query: 12  GASCHVC---NDLSLFRKFNEVKDKNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLH 71
           GA+ H+    N+LSL + +    D  +++ D  T  ++  G   L  T  + L L  +L+
Sbjct: 336 GATHHITSDFNNLSLHQPYTGGDD--VMVADGSTIPISHTGSTSLS-TKSRPLNLHNILY 395

Query: 72  TPEIRKNLVSGY-LLNKVGFTQTIGSDLFTLTKNNVFVG--KGYATDGMFKLDLEINK-- 131
            P I KNL+S Y L N  G +       F +   N  V   +G   D +++  +  ++  
Sbjct: 396 VPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPV 455

Query: 132 -IASSAYMLTSFNVWHAILCH----VNKRLISNISRLNLIPKLSLHDFEKCACCSQAKII 191
            + +S     + + WHA L H    +   +ISN S   L P    H F  C+ C   K  
Sbjct: 456 SLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPS---HKFLSCSDCLINKSN 515

Query: 192 KTS-HKSVTRVTEPLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAY 251
           K    +S    T PLE I+SD+      L+ ++ RY V F+D  + YT++Y LK KS   
Sbjct: 516 KVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVK 575

Query: 252 EMFKVFVTEIENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKAE 311
           E F  F   +EN+F  RI    SD G E+  VA  E+++   I H T+ P++PE NG +E
Sbjct: 576 ETFITFKNLLENRFQTRIGTFYSDNGGEF--VALWEYFSQHGISHLTSPPHTPEHNGLSE 635

Query: 312 RKNRTLTELVVAILLESGATLYWWGEIIKTVNYVLNRVPKSNSK-TSPCEVLKHKTPNLT 363
           RK+R + E  + +L  +     +W        Y++NR+P    +  SP + L   +PN  
Sbjct: 636 RKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYD 692

[Close]
BLAST of Cmc03g0069091 vs. ExPASy Swiss-Prot
Match: Q12501 (Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-OR2 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.1e-16
Identity = 84/337 (24.93%), Postives = 143/337 (42.43%), Query Frame = 0 

Query: 34  NILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTPEIRKNLVSGYLLNKVGFT----- 93
           NI+        +  IG L   F +G    +K  LHTP I  +L+S   L     T     
Sbjct: 481 NIVDAQKQDIPINAIGNLHFNFQNGTKTSIK-ALHTPNIAYDLLSLSELTNQNITACFTR 540

Query: 94  ----QTIGSDLFTLTKNNVF--VGKGYATDGMFKLDLEINKI-ASSAYMLTSFNVWHAIL 153
               ++ G+ L  + K+  F  + K Y         L IN +  S +     + + H +L
Sbjct: 541 NTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHIS-KLTINNVNKSKSVNKYPYPLIHRML 600

Query: 154 CHVNKRLISNISRLNLIPKLSLHDFE-------KCACCSQAKIIKTSHKSVTRVT----- 213
            H N R I    + N +  L   D E       +C  C   K  K  H   +R+      
Sbjct: 601 GHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESY 660

Query: 214 EPLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLL--KNKSDAYEMFKVFVTEI 273
           EP + +H+D+      L +++  Y ++F D+ + + ++Y L  + +     +F   +  I
Sbjct: 661 EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFI 720

Query: 274 ENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKAERKNRTLTELV 333
           +NQFN R+  ++ DRG+EY +   ++F+ ++ I    T       +G AER NRTL    
Sbjct: 721 KNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDC 780

Query: 334 VAILLESGATLYWWGEIIKTVNYVLNR-VPKSNSKTS 344
             +L  SG   + W   ++    + N  V   N K++
Sbjct: 781 RTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSA 815

[Close]
BLAST of Cmc03g0069091 vs. ExPASy TrEMBL
Match: A0A5D3DCJ1 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00010 PE=4 SV=1)

HSP 1 Score: 644.8 bits (1662), Expect = 2.2e-181
Identity = 319/351 (90.88%), Postives = 331/351 (94.30%), Query Frame = 0 

Query: 12  GASCHVCNDLSLFRKFNEVKDKNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTPE 71
           GAS HVC++LSLFRK+NEVKDKNILL DHHTTKV GIGE+ELKFTS KTLV+KE LHTPE
Sbjct: 176 GASHHVCHELSLFRKYNEVKDKNILLGDHHTTKVVGIGEVELKFTSDKTLVVKEGLHTPE 235

Query: 72  IRKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIASSAYML 131
           IRKNLV GYLLNK GFTQTIGS+LFTLTKNNVFVGKGYATDGMFKL+LEINKIASSAYML
Sbjct: 236 IRKNLVFGYLLNKAGFTQTIGSNLFTLTKNNVFVGKGYATDGMFKLNLEINKIASSAYML 295

Query: 132 TSFNVWHAILCHVNKRLISNISRLNLIPKLSLHDFEKCACCSQAKIIKTSHKSVTRVTEP 191
           TSFNVWHA LCHVNKRLISN+SRLNLIPKLSLHDFEKCACCSQAKI KTSHK VTRVT+P
Sbjct: 296 TSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKTSHKFVTRVTKP 355

Query: 192 LELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIENQF 251
           LELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIENQF
Sbjct: 356 LELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIENQF 415

Query: 252 NKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKAERKNRTLTELVVAIL 311
           NKRIKRLRSDRGTEYDSVAFNEFYNSK IIHETT PYSPE+NGK ERKNRTLTEL VAIL
Sbjct: 416 NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTTPYSPEMNGKEERKNRTLTELAVAIL 475

Query: 312 LESGATLYWWGEIIKTVNYVLNRVPKSNSKTSPCEVLKHKTPNLTYLRTWG 363
           LES A   WWGEIIKTVNYVLNR+PKSNSKTSP EVLKHK PNL+YLRTWG
Sbjct: 476 LESEAAPSWWGEIIKTVNYVLNRIPKSNSKTSPYEVLKHKIPNLSYLRTWG 526

[Close]
BLAST of Cmc03g0069091 vs. ExPASy TrEMBL
Match: A0A7N2R9F3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 3.9e-114
Identity = 215/353 (60.91%), Postives = 259/353 (73.37%), Query Frame = 0 

Query: 12  GASCHVCNDLSLFRKFNEV-KDKNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTP 71
           GA+ HVC D + F+ +    ++K I+L D   TKV G GE+ELKFTSG+ L LK+V +TP
Sbjct: 338 GANRHVCYDKNWFKLYTPFEEEKTIMLGDSSKTKVLGSGEVELKFTSGRVLTLKDVFYTP 397

Query: 72  EIRKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIA-SSAY 131
            +RKNL+S +LLNK GF QT+ SD + +TK  +FVGKGYA DGMFKL++E NK + SS Y
Sbjct: 398 SMRKNLMSSFLLNKAGFKQTMESDNYVITKKGLFVGKGYACDGMFKLNVENNKASTSSVY 457

Query: 132 MLTSFNVWHAILCHVNKRLISNISRLNLIPKLSLHDFEKCACCSQAKIIKTSHKSVTRVT 191
           ML+S N WHA LCH+N R +  +S L LIP+LS  DFEKC  CSQAKI K  HKSV R T
Sbjct: 458 MLSSINFWHARLCHINSRYVGIMSSLGLIPRLS-KDFEKCETCSQAKITKKPHKSVVRNT 517

Query: 192 EPLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIEN 251
           E LELIHSDLCEF+G LTR   RY++TFIDD S YT IYLLKNKSDA+E F+ F+ E+EN
Sbjct: 518 ELLELIHSDLCEFEGILTRGGNRYIITFIDDFSKYTTIYLLKNKSDAFEKFQDFLKEVEN 577

Query: 252 QFNKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKAERKNRTLTELVVA 311
           QF ++IKR+RSDRG EY+S AFN F  S  IIHETT PYSP  NG  ERKNRTL EL  A
Sbjct: 578 QFGRKIKRIRSDRGREYESSAFNSFVQSLGIIHETTAPYSPASNGVVERKNRTLIELTNA 637

Query: 312 ILLESGATLYWWGEIIKTVNYVLNRVPKSNSKTSPCEVLKHKTPNLTYLRTWG 363
           +L+ESGA L++WGE I T  +VLNRVP   S T+P E+ K   PNL YLR WG
Sbjct: 638 MLIESGAPLHFWGEAILTACHVLNRVPHKKSHTTPFEMWKGHKPNLGYLRVWG 689

[Close]
BLAST of Cmc03g0069091 vs. ExPASy TrEMBL
Match: A0A7N2L531 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 8.6e-114
Identity = 214/352 (60.80%), Postives = 260/352 (73.86%), Query Frame = 0 

Query: 12  GASCHVCNDLSLFRKFNEV-KDKNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTP 71
           GA+ HVC D + F+ +    ++K ++L D   TKV G GE+ELKFTSG+ L LK+VL+TP
Sbjct: 338 GANRHVCYDKNWFKLYTPFEEEKTVMLGDSSKTKVLGSGEVELKFTSGRVLTLKDVLYTP 397

Query: 72  EIRKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIA-SSAY 131
            +RKNL+S +LLNK GF QT+ SD + +TK  +FVGKGYA DGMFKL++E NK + SS Y
Sbjct: 398 SMRKNLMSSFLLNKAGFKQTMESDNYVITKKGLFVGKGYACDGMFKLNVENNKASTSSVY 457

Query: 132 MLTSFNVWHAILCHVNKRLISNISRLNLIPKLSLHDFEKCACCSQAKIIKTSHKSVTRVT 191
           ML+S N WHA LCH+N R +  +S L LIP+LS  DFEKC  CSQAKI K  HK+V R T
Sbjct: 458 MLSSINFWHARLCHINSRYVGIMSSLGLIPRLS-KDFEKCETCSQAKITKRPHKNVVRNT 517

Query: 192 EPLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIEN 251
           E LELIHSDLCEF+G LTR   RY++TFIDD S YT IYLLKNKSDA+E F+ F+ E+EN
Sbjct: 518 ELLELIHSDLCEFEGILTRGGNRYIITFIDDFSKYTTIYLLKNKSDAFEKFQDFLQEVEN 577

Query: 252 QFNKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKAERKNRTLTELVVA 311
           QF ++IKR+RSDRG EY+S AFN F  S  IIHETT PYSP  NG AERKNRTL EL  A
Sbjct: 578 QFGRKIKRIRSDRGREYESSAFNSFAQSLGIIHETTAPYSPASNGVAERKNRTLIELTNA 637

Query: 312 ILLESGATLYWWGEIIKTVNYVLNRVPKSNSKTSPCEVLKHKTPNLTYLRTW 362
           +L+ESGA L++WGE I T  +VLNRVP   S T+P E+ K   PNL YLR W
Sbjct: 638 MLIESGAPLHFWGEAILTACHVLNRVPHKKSHTTPFEMWKGHKPNLGYLRAW 688

[Close]
BLAST of Cmc03g0069091 vs. ExPASy TrEMBL
Match: Q0KIN7 (Polyprotein, putative OS=Solanum demissum OX=50514 GN=SDM1_27t00018 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 3.5e-107
Identity = 197/352 (55.97%), Postives = 251/352 (71.31%), Query Frame = 0 

Query: 12  GASCHVCNDLSLFRKFNEVKD-KNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTP 71
           GA+ HVC D   F+K+   ++ K I+L D HTT+V G G++EL FTSG+ L LK+VL+TP
Sbjct: 315 GANRHVCYDKDWFKKYTHFEEPKTIMLGDSHTTQVLGTGDVELCFTSGRVLTLKDVLYTP 374

Query: 72  EIRKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIASSAYM 131
            +RK L+S +LLNK GF Q I S+ + + K  +FVGKGYA DGMFKL++E+NK ++S YM
Sbjct: 375 SMRKKLMSSFLLNKAGFKQIIESNQYVIVKKGIFVGKGYACDGMFKLNVEMNKTSTSVYM 434

Query: 132 LTSFNVWHAILCHVNKRLISNISRLNLIPKLSLHDFEKCACCSQAKIIKTSHKSVTRVTE 191
           L+S N WHA LCH+N R +  +S L LIP +   +FEKC  CS+AKI K  H  V R T+
Sbjct: 435 LSSTNFWHARLCHINDRYVGIMSSLGLIPMIK-KNFEKCEACSKAKITKRPHFQVERKTD 494

Query: 192 PLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIENQ 251
            LEL+H+D+CE  G LTR   RY +TFIDD S +T++YL+KNKSDA+E FK ++ E+ENQ
Sbjct: 495 LLELVHTDICELGGILTRGGNRYFITFIDDFSKFTYVYLMKNKSDAFENFKTYLHEVENQ 554

Query: 252 FNKRIKRLRSDRGTEYDSVAFNEFYNSKRIIHETTVPYSPEINGKAERKNRTLTELVVAI 311
           F ++IKR+RSDRG EY+S  FN F  S  IIHETT PYSP  NG AERKNRTL EL  A+
Sbjct: 555 FGRKIKRIRSDRGREYESNEFNSFVRSLGIIHETTPPYSPSSNGVAERKNRTLVELTNAM 614

Query: 312 LLESGATLYWWGEIIKTVNYVLNRVPKSNSKTSPCEVLKHKTPNLTYLRTWG 363
           L+ES A L +WGE I T  YVLNRVP   SK +P E+ K   P+L YLR WG
Sbjct: 615 LIESHAPLNFWGEAILTACYVLNRVPHKKSKLTPFELWKGYKPSLGYLRVWG 665

[Close]
BLAST of Cmc03g0069091 vs. ExPASy TrEMBL
Match: A0A5A7TV55 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005950 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 2.3e-98
Identity = 183/201 (91.04%), Postives = 192/201 (95.52%), Query Frame = 0 

Query: 12  GASCHVCNDLSLFRKFNEVKDKNILLKDHHTTKVTGIGELELKFTSGKTLVLKEVLHTPE 71
           GAS HVC+DLSLFRK+NEVKDKNILL DHHTTKVTGI E++LKFTSGKTLVLKEVLHTPE
Sbjct: 41  GASRHVCHDLSLFRKYNEVKDKNILLGDHHTTKVTGIEEVKLKFTSGKTLVLKEVLHTPE 100

Query: 72  IRKNLVSGYLLNKVGFTQTIGSDLFTLTKNNVFVGKGYATDGMFKLDLEINKIASSAYML 131
           IRKNLVS YLLNK GFTQTIGS+LFTLTKNNV+VGKGYATDGMFKL+LEINKIASSAYML
Sbjct: 101 IRKNLVSRYLLNKAGFTQTIGSNLFTLTKNNVYVGKGYATDGMFKLNLEINKIASSAYML 160

Query: 132 TSFNVWHAILCHVNKRLISNISRLNLIPKLSLHDFEKCACCSQAKIIKTSHKSVTRVTEP 191
           TSFNVWHA LCHVNKRLISN+SRLNLIPKLSLHDFEKCACCSQAKI +TSHKSVT VT P
Sbjct: 161 TSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITETSHKSVTIVTGP 220

Query: 192 LELIHSDLCEFDGTLTRNSKR 213
           LELIHSDLCEFDGTLTRNSKR
Sbjct: 221 LELIHSDLCEFDGTLTRNSKR 241

The following BLAST results are available for this feature:
BLAST of Cmc03g0069091 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0034938.14.4e-18190.88putative Polyprotein [Cucumis melo var. makuwa] >TYK21293.1 putative Polyprotein... [more]
ABI34306.17.2e-10755.97Polyprotein, putative [Solanum demissum][more]
KAA0046026.14.7e-9891.04putative Polyprotein [Cucumis melo var. makuwa][more]
KAA0055815.11.3e-9281.25putative Polyprotein [Cucumis melo var. makuwa] >TYK10066.1 putative Polyprotein... [more]
XP_021732277.14.3e-9157.69uncharacterized protein LOC110699091 [Chenopodium quinoa][more]
BLAST of Cmc03g0069091 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109781.4e-4431.44Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041461.3e-3732.35Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT942.6e-3028.88Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW29.7e-3030.60Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q125016.1e-1624.93Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
BLAST of Cmc03g0069091 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DCJ12.2e-18190.88Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119... [more]
A0A7N2R9F33.9e-11460.91Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A7N2L5318.6e-11460.80Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Q0KIN73.5e-10755.97Polyprotein, putative OS=Solanum demissum OX=50514 GN=SDM1_27t00018 PE=4 SV=1[more]
A0A5A7TV552.3e-9891.04Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243... [more]
BLAST of Cmc03g0069091 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 182..361
e-value: 6.7E-37
score: 128.7
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 189..290
e-value: 3.0E-16
score: 59.6
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 187..352
score: 22.320904
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 124..176
e-value: 2.8E-9
score: 36.7
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 133..332
NoneNo IPR availablePANTHERPTHR11439:SF324RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN, GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATEDcoord: 133..332
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 187..349

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc03g0069091.1Cmc03g0069091.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding