Cmc02g0047631.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc02g0047631.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr02: 13125969 .. 13127315 (+)
Sequence length274
RNA-Seq ExpressionCmc02g0047631.1
SyntenyCmc02g0047631.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAGTTTCTTCTTCTGTGTTCATTGGTCTGTTTCTTTGCAGATATTAAATCAAGATCTTGGCAGATGTTTTCCTGCTAAAAACGATCTGAAAAGTGTCAAAGCTCTCTGTGGTTGGATCAATGGAACTTCATGCCCTGCTCCTCTCACTGTAGCAAAGGTTAGCCCTTCATAAACCTCTGTCCATCCACCAACCTGATAAGTACATTTCATTCAGTTTGATTAAAGCATTCATTCAAATATAGAACAAAACAAAGGATAGAGATCTTATATATAACCTGTCCTCGGGAGTACCATGGATACCATCGAGTTTTAATGTGGAGGTTGAGATGGCTTAGGGCAAATCTTGTGGCTGTCACTGGAACCACTGAATCTGTATCCCCGCTGCATTTTTTCACATGAAATTGTCATGGTGAAGGAGTCTTAAGGTCAAATAAATTGTCATGGCTGTCACTCTTCTCTAGATTTCTTTTCACCATCATCATGTGAAACTCATGACTCGAGTCAATTACACACCAAAATCTAAGTCAATCAATTTAGACATTGAATTACCTTCACTTTTGAAAATGATCAGTGAATTGATGATTTTCAATTGTCTGTAGATTTCTTTAAATATCGGTTTTACAAAATCGACAATTAGCGTGAGTGCATGTATTCGGAAATTTTGACTAAGAATCTAAATTAATTTATTTATGAAAGTTTAGAAGTTTAGTTAATACAATTATAAATTTCACGTAAGGTTTTCTTGAGTGGAACGTAATGAAGTGGGTAAATTGATACAATCTCCAAAATTTAGGGGAATAAATTGATATTTCTCATTTACTTAGATATTCGGGTAAAACTAGACTTCTCCACCCTTTAAAATTACTATACATGGATTGAAGAACACAGAAAATGAGAAACAAGGATTTATTATGTGGAAAGACTAAAGCTTTTCAAATCTAACCTGAAAACCCATATCCTTAAACCAGCTGCAATGAGCTCCTTGTATGTAGGCAACATGGATTCTTGGGAATCCTTCCAGTTCTTAATAAGAACATCACTGTCACCCAAAAAAGAAAAACAAACCTTTATAGCTGATAAAGTTATAAGTTTTGGCCAAGGAAACTGAGAAACTTGCAATGCAACAAACTCACCTGCAAGCAGTCCATTTGTAGGGAATTCCAGTAACATTGGCATGCATTGCCAATTGAACCTCTTTAAGATTATAATACTTCTCTGCATAATTCTCAGTACATGGATCGTACCCTGACACCCTCCGCCGAAGAAGAGAGCTTTTGAACCTGATAGTGGATGCCCCGACCGCTGCCACCGAGTTGTTCGGAACAATGGTGGGACATTTGGG

mRNA sequence

ATGACCAGTTTCTTCTTCTGTGTTCATTGGTCTGTTTCTTTGCAGATATTAAATCAAGATCTTGGCAGATGTTTTCCTGCTAAAAACGATCTGAAAAGTGTCAAAGCTCTCTGTGGTTGGATCAATGGAACTTCATGCCCTGCTCCTCTCACTGTAGCAAAGTACATGGATCGTACCCTGACACCCTCCGCCGAAGAAGAGAGCTTTTGAACCTGATAGTGGATGCCCCGACCGCTGCCACCGAGTTGTTCGGAACAATGGTGGGACATTTGGG

Coding sequence (CDS)

ATGACCAGTTTCTTCTTCTGTGTTCATTGGTCTGTTTCTTTGCAGATATTAAATCAAGATCTTGGCAGATGTTTTCCTGCTAAAAACGATCTGAAAAGTGTCAAAGCTCTCTGTGGTTGGATCAATGGAACTTCATGCCCTGCTCCTCTCACTGTAGCAAAGTACATGGATCGTACCCTGACACCCTCCGCCGAAGAAGAGAGCTTTTGA

Protein sequence

MTSFFFCVHWSVSLQILNQDLGRCFPAKNDLKSVKALCGWINGTSCPAPLTVAKYMDRTLTPSAEEESF
Homology
The following BLAST results are available for this feature:
BLAST of Cmc02g0047631.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc02g0047631.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc02g0047631.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc02g0047631.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc02g0047631Cmc02g0047631gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc02g0047631.1-exonCmc02g0047631.1-exon-CMiso1.1chr02:13125969..13126130exon
Cmc02g0047631.1-exonCmc02g0047631.1-exon-CMiso1.1chr02:13127204..13127315exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc02g0047631.1-cdsCmc02g0047631.1-cds-CMiso1.1chr02:13125969..13126130CDS
Cmc02g0047631.1-cdsCmc02g0047631.1-cds-CMiso1.1chr02:13127204..13127251CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc02g0047631.1-three_prime_utrCmc02g0047631.1-three_prime_utr-CMiso1.1chr02:13127252..13127315three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc02g0047631.1Cmc02g0047631.1-proteinpolypeptide