Cmc02g0044961 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCTTTGCGGTATTGAGGGATAACCAGCTCTATGCAAACAGAAAGAAGTGTGTAATTGCACACTCTCAAATCCAATACTTAGGTCATCAAATATCTAAGAAGGGAGTAAAAGCTAATGAGGAAAAGATTAGAAGTATGATGAATTGGCCTCAACCTACGGATGTAATAGGACTGAGAGGGTTCCTAGGGCTGACCGGTTACTGTAGGAGATTTGTAAAGAGCTATGGAGAAATTGCTGCCCTCTTAACCAAGCTCTTACAAAAAAAATTCATTTAA ATGGTCTTTGCGGTATTGAGGGATAACCAGCTCTATGCAAACAGAAAGAAGTGTGTAATTGCACACTCTCAAATCCAATACTTAGGTCATCAAATATCTAAGAAGGGAGTAAAAGCTAATGAGGAAAAGATTAGAAGTATGATGAATTGGCCTCAACCTACGGATGTAATAGGACTGAGAGGGTTCCTAGGGCTGACCGGTTACTGTAGGAGATTTGTAAAGAGCTATGGAGAAATTGCTGCCCTCTTAACCAAGCTCTTACAAAAAAAATTCATTTAA ATGGTCTTTGCGGTATTGAGGGATAACCAGCTCTATGCAAACAGAAAGAAGTGTGTAATTGCACACTCTCAAATCCAATACTTAGGTCATCAAATATCTAAGAAGGGAGTAAAAGCTAATGAGGAAAAGATTAGAAGTATGATGAATTGGCCTCAACCTACGGATGTAATAGGACTGAGAGGGTTCCTAGGGCTGACCGGTTACTGTAGGAGATTTGTAAAGAGCTATGGAGAAATTGCTGCCCTCTTAACCAAGCTCTTACAAAAAAAATTCATTTAA MVFAVLRDNQLYANRKKCVIAHSQIQYLGHQISKKGVKANEEKIRSMMNWPQPTDVIGLRGFLGLTGYCRRFVKSYGEIAALLTKLLQKKFI Homology
BLAST of Cmc02g0044961 vs. NCBI nr
Match: KAA0065995.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK28942.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 154.5 bits (389), Expect = 4.6e-34 Identity = 73/89 (82.02%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc02g0044961 vs. NCBI nr
Match: KAA0043868.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK25268.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]) HSP 1 Score: 154.1 bits (388), Expect = 6.0e-34 Identity = 74/89 (83.15%), Postives = 80/89 (89.89%), Query Frame = 0
BLAST of Cmc02g0044961 vs. NCBI nr
Match: KAA0063770.1 (Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa] >TYK05522.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 153.7 bits (387), Expect = 7.8e-34 Identity = 73/89 (82.02%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of Cmc02g0044961 vs. NCBI nr
Match: XP_031745419.1 (uncharacterized protein LOC116405630 [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 6.6e-33 Identity = 70/89 (78.65%), Postives = 82/89 (92.13%), Query Frame = 0
BLAST of Cmc02g0044961 vs. NCBI nr
Match: XP_031742100.1 (uncharacterized protein LOC116404055 [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 6.6e-33 Identity = 70/89 (78.65%), Postives = 82/89 (92.13%), Query Frame = 0
BLAST of Cmc02g0044961 vs. ExPASy Swiss-Prot
Match: P92523 (Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 6.0e-21 Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 0
BLAST of Cmc02g0044961 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 3.0e-12 Identity = 33/90 (36.67%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of Cmc02g0044961 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.9e-11 Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Cmc02g0044961 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 5.7e-11 Identity = 31/86 (36.05%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of Cmc02g0044961 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.1e-09 Identity = 29/87 (33.33%), Postives = 50/87 (57.47%), Query Frame = 0
BLAST of Cmc02g0044961 vs. ExPASy TrEMBL
Match: A0A5A7VJU2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00290 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.2e-34 Identity = 73/89 (82.02%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc02g0044961 vs. ExPASy TrEMBL
Match: A0A5A7TLY4 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004020 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.9e-34 Identity = 74/89 (83.15%), Postives = 80/89 (89.89%), Query Frame = 0
BLAST of Cmc02g0044961 vs. ExPASy TrEMBL
Match: A0A5A7V989 (Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00260 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.8e-34 Identity = 73/89 (82.02%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of Cmc02g0044961 vs. ExPASy TrEMBL
Match: A0A5A7TYW6 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00690 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 9.3e-33 Identity = 72/89 (80.90%), Postives = 79/89 (88.76%), Query Frame = 0
BLAST of Cmc02g0044961 vs. ExPASy TrEMBL
Match: A0A5D3CA79 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002470 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 9.3e-33 Identity = 72/89 (80.90%), Postives = 79/89 (88.76%), Query Frame = 0
BLAST of Cmc02g0044961 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 101.3 bits (251), Expect = 4.3e-22 Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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