Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATGATATTGGCCAACCCCCCAACGGTCCAACGCGCCCTCATAACCAATGGCAACTTGAAGATAGAGAAACACATAATTATGTAGTGGAGGGGAAGGTGAAGCCTATATATATATATTGATTTTGGACTTGTGAGTAGCGAAACACAAACCCAAAAGATATTTTTGGTCGACATATATGGGTGGCTCTCAAAAATGGTTTTCTTTGGGTCTTCTTACCCTCTGCATTGTGCTCCATTTGAGTGCTATTGTTTTGGGAGATGACAAGCTTAATAAGAATGGGTTTAGGGATGATGACGACTGTCGTTGGGGCAGGCGTTGCGGTGGCAGATTTGGAGGACGTGGACCACGCTTCGGTAGGGGAGGTGGTTTTGGTGGGGGTAGAGGTGGTGGATTTGGTGGTGGTAGGGGTGGAGGACTTGGTGGTGGTAGGGGTGGAGGACTTGGTGGTGGTAGGGGTGGAGGACTTGGTGGTGGATCGGGTGGAGGGTTTGGAGGTGGTGGTGGAGTAGGTGGTGGTGCTGGAGGTGGTGTTGGTGGTGGTGGCGGATTTGGAGGTGGTGGAGGAGGAGGATTGGGAGGTGGTTCGGGACATGGTGGAGGATTTGGAGCTGGAGGTGGCGTTGGAGGTGGTGCGGGAGGAGGAGTTGGGGGTGGAGGTGGATTTGGTGGAGGTGGCGGTGGTGGCGTTGGTGGTGGATCAGGTCATGGTGGAGGTTTTGGAGCTGGAGGAGGTGTTGGTGGTGGTGTTGGTGGAGGCGCTGGAGGTGGAGGCGGCGGAGGGGGTGGTGGTGGTGGTGGCATTGGTGGTGGACATGGCGGGGGATTTGGAGCTGGTGGAGGTGTTGGTGGAGGAGTTGGAGGTGGTGCAGGAGGAGGAGGTGGTGGAGGCGGTGGAGGTGGCGGCGGCATTGGTGGTGGGTCAGGCCATGGTGGAGGCTTTGGAGCTGGTGGAGGTATAGGTGGTGGTGTCGGCGGAGGTGCCGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGCGGAGGTGGTGGTGGTTTGGGAGGAGGTTCTGGTCATGGAGGTGGATTTGGAGCCGGTGGTGGCATTGGGGGTGGAGCTGGTGGAGGGCTTGGAGGAGGTGCTGGAGGTGGCCGTGGTGGTCACGGTGGAGGAATTGGAATCGGAATAGGGATTGGAGTCGGAATAGGTAGTGGATCTGGTCATGGCGTTGGTGTTGGCTCTGGATCCGGTGGAGGAGGTGGTGGTCATTAAAACCCTATCTCATTTTACACGTAATTTCAAAGTTTTTATTGTACGTGGAACAAAGCTCAACTATTATTGTAATTGTACTACTCTTCTCTATTTTCCTATGCTTACAACTTCATTCCCATAATTGTTAGAACTTTTAAAAAAAGGGCTATGCAAATAGATTTTGTTATAATGTTTTTAATTAGTACATTCTCTTATCAAATTTCATCCTTTACTTGTCTCTCTCCCATTCAAATTTATAATCCTAAAACTTAATTAGAAGTAAAACGAAAGTAGAGGTACCAAATCAAGCAATGTAAAGCTTGTAATGGAGTTTTTTTCTCCAAGGTAAGTAAGAAAAGGTTATGT
mRNA sequence
AAATGATATTGGCCAACCCCCCAACGGTCCAACGCGCCCTCATAACCAATGGCAACTTGAAGATAGAGAAACACATAATTATGTAGTGGAGGGGAAGGTGAAGCCTATATATATATATTGATTTTGGACTTGTGAGTAGCGAAACACAAACCCAAAAGATATTTTTGGTCGACATATATGGGTGGCTCTCAAAAATGGTTTTCTTTGGGTCTTCTTACCCTCTGCATTGTGCTCCATTTGAGTGCTATTGTTTTGGGAGATGACAAGCTTAATAAGAATGGGTTTAGGGATGATGACGACTGTCGTTGGGGCAGGCGTTGCGGTGGCAGATTTGGAGGACGTGGACCACGCTTCGGTAGGGGAGGTGGTTTTGGTGGGGGTAGAGGTGGTGGATTTGGTGGTGGTAGGGGTGGAGGACTTGGTGGTGGTAGGGGTGGAGGACTTGGTGGTGGTAGGGGTGGAGGACTTGGTGGTGGATCGGGTGGAGGGTTTGGAGGTGGTGGTGGAGTAGGTGGTGGTGCTGGAGGTGGTGTTGGTGGTGGTGGCGGATTTGGAGGTGGTGGAGGAGGAGGATTGGGAGGTGGTTCGGGACATGGTGGAGGATTTGGAGCTGGAGGTGGCGTTGGAGGTGGTGCGGGAGGAGGAGTTGGGGGTGGAGGTGGATTTGGTGGAGGTGGCGGTGGTGGCGTTGGTGGTGGATCAGGTCATGGTGGAGGTTTTGGAGCTGGAGGAGGTGTTGGTGGTGGTGTTGGTGGAGGCGCTGGAGGTGGAGGCGGCGGAGGGGGTGGTGGTGGTGGTGGCATTGGTGGTGGACATGGCGGGGGATTTGGAGCTGGTGGAGGTGTTGGTGGAGGAGTTGGAGGTGGTGCAGGAGGAGGAGGTGGTGGAGGCGGTGGAGGTGGCGGCGGCATTGGTGGTGGGTCAGGCCATGGTGGAGGCTTTGGAGCTGGTGGAGGTATAGGTGGTGGTGTCGGCGGAGGTGCCGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGCGGAGGTGGTGGTGGTTTGGGAGGAGGTTCTGGTCATGGAGGTGGATTTGGAGCCGGTGGTGGCATTGGGGGTGGAGCTGGTGGAGGGCTTGGAGGAGGTGCTGGAGGTGGCCGTGGTGGTCACGGTGGAGGAATTGGAATCGGAATAGGGATTGGAGTCGGAATAGGTAGTGGATCTGGTCATGGCGTTGGTGTTGGCTCTGGATCCGGTGGAGGAGGTGGTGGTCATTAAAACCCTATCTCATTTTACACGTAATTTCAAAGTTTTTATTGTACGTGGAACAAAGCTCAACTATTATTGTAATTGTACTACTCTTCTCTATTTTCCTATGCTTACAACTTCATTCCCATAATTGTTAGAACTTTTAAAAAAAGGGCTATGCAAATAGATTTTGTTATAATGTTTTTAATTAGTACATTCTCTTATCAAATTTCATCCTTTACTTGTCTCTCTCCCATTCAAATTTATAATCCTAAAACTTAATTAGAAGTAAAACGAAAGTAGAGGTACCAAATCAAGCAATGTAAAGCTTGTAATGGAGTTTTTTTCTCCAAGGTAAGTAAGAAAAGGTTATGT
Coding sequence (CDS)
ATGGGTGGCTCTCAAAAATGGTTTTCTTTGGGTCTTCTTACCCTCTGCATTGTGCTCCATTTGAGTGCTATTGTTTTGGGAGATGACAAGCTTAATAAGAATGGGTTTAGGGATGATGACGACTGTCGTTGGGGCAGGCGTTGCGGTGGCAGATTTGGAGGACGTGGACCACGCTTCGGTAGGGGAGGTGGTTTTGGTGGGGGTAGAGGTGGTGGATTTGGTGGTGGTAGGGGTGGAGGACTTGGTGGTGGTAGGGGTGGAGGACTTGGTGGTGGTAGGGGTGGAGGACTTGGTGGTGGATCGGGTGGAGGGTTTGGAGGTGGTGGTGGAGTAGGTGGTGGTGCTGGAGGTGGTGTTGGTGGTGGTGGCGGATTTGGAGGTGGTGGAGGAGGAGGATTGGGAGGTGGTTCGGGACATGGTGGAGGATTTGGAGCTGGAGGTGGCGTTGGAGGTGGTGCGGGAGGAGGAGTTGGGGGTGGAGGTGGATTTGGTGGAGGTGGCGGTGGTGGCGTTGGTGGTGGATCAGGTCATGGTGGAGGTTTTGGAGCTGGAGGAGGTGTTGGTGGTGGTGTTGGTGGAGGCGCTGGAGGTGGAGGCGGCGGAGGGGGTGGTGGTGGTGGTGGCATTGGTGGTGGACATGGCGGGGGATTTGGAGCTGGTGGAGGTGTTGGTGGAGGAGTTGGAGGTGGTGCAGGAGGAGGAGGTGGTGGAGGCGGTGGAGGTGGCGGCGGCATTGGTGGTGGGTCAGGCCATGGTGGAGGCTTTGGAGCTGGTGGAGGTATAGGTGGTGGTGTCGGCGGAGGTGCCGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGCGGAGGTGGTGGTGGTTTGGGAGGAGGTTCTGGTCATGGAGGTGGATTTGGAGCCGGTGGTGGCATTGGGGGTGGAGCTGGTGGAGGGCTTGGAGGAGGTGCTGGAGGTGGCCGTGGTGGTCACGGTGGAGGAATTGGAATCGGAATAGGGATTGGAGTCGGAATAGGTAGTGGATCTGGTCATGGCGTTGGTGTTGGCTCTGGATCCGGTGGAGGAGGTGGTGGTCATTAA
Protein sequence
MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFGRGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGVGGGAGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGGGGGGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGGAGGGLGGGAGGGRGGHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGGGH
Homology
BLAST of Cmc01g0008091 vs. NCBI nr
Match:
XP_011659702.1 (glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN43514.1 hypothetical protein Csa_020488 [Cucumis sativus])
HSP 1 Score: 256.1 bits (653), Expect = 4.3e-64
Identity = 327/361 (90.58%), Postives = 330/361 (91.41%), Query Frame = 0
Query: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFG 60
MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRG
Sbjct: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRG---- 60
Query: 61 RGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVG 120
GGFGGGRGGG GGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVG
Sbjct: 61 ---------RGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVG 120
Query: 121 GGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGG 180
GGGGFGGGGGGGLGGGSGHGGGF GGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGG
Sbjct: 121 GGGGFGGGGGGGLGGGSGHGGGF--GGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGG 180
Query: 181 FGAGGGVGGGVGGGA--GGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGA--GGGGG 240
GAGGGVGGGVGGGA GGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGA GGGGG
Sbjct: 181 IGAGGGVGGGVGGGAGGGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGG 240
Query: 241 GGGGGGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGG 300
GGGGGGGGIGGGSGHGGGFGAGGG+GGG+GGGA GGGGGGGGGGGGGGGLGGGSGHGGG
Sbjct: 241 GGGGGGGGIGGGSGHGGGFGAGGGVGGGIGGGA--GGGGGGGGGGGGGGGLGGGSGHGGG 300
Query: 301 FGAGGGIGGGAGGGLGGGAGGGRGGHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGGG 358
FG GGG+GGGAGGG GG GG GGHGGGIGIGIGIGVGIG GSGHGVGVGSGSGGGGGG
Sbjct: 301 FGGGGGLGGGAGGG-GGIGGGAGGGHGGGIGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 343
BLAST of Cmc01g0008091 vs. NCBI nr
Match:
XP_016901706.1 (PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo])
HSP 1 Score: 226.9 bits (577), Expect = 2.8e-55
Identity = 263/357 (73.67%), Postives = 264/357 (73.95%), Query Frame = 0
Query: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFG 60
MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFG
Sbjct: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFG 60
Query: 61 RGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVG 120
RGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGG +
Sbjct: 61 RGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGRNR------------------ 120
Query: 121 GGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGG 180
Sbjct: 121 ------------------------------------------------------------ 180
Query: 181 FGAGGGVGGGVGGGAGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGGGG 240
GAGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGGGG
Sbjct: 181 -----------VEGAGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGGGG 240
Query: 241 GGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFGAG 300
GGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFGAG
Sbjct: 241 GGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFGAG 268
Query: 301 GGIGGGAGGGLGGGAGGGRGGHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGGGH 358
GGIGGGAGGGLGGGAGGGRGGHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGGGH
Sbjct: 301 GGIGGGAGGGLGGGAGGGRGGHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGGGH 268
BLAST of Cmc01g0008091 vs. NCBI nr
Match:
KAG7011907.1 (hypothetical protein SDJN02_26814, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 205.7 bits (522), Expect = 6.7e-49
Identity = 295/359 (82.17%), Postives = 301/359 (83.84%), Query Frame = 0
Query: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFG 60
MGGS KW SLGLL LCIVLHLSA LGDDKL+K+ FR DDDC WGRRCGGRFGGRGPRFG
Sbjct: 1 MGGSPKWVSLGLLALCIVLHLSAFALGDDKLDKSRFR-DDDC-WGRRCGGRFGGRGPRFG 60
Query: 61 RGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVG 120
RGGGFGGGRGGGF GGGRGGGLGGGSGGGFGGGGGVGG G
Sbjct: 61 RGGGFGGGRGGGF----------------GGGRGGGLGGGSGGGFGGGGGVGG------G 120
Query: 121 GGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGG 180
GGGG GGGGGGGLGGGSG GGGFGAGGGVGGGA GGGGG GGGGGGG+GGGSGHGGG
Sbjct: 121 GGGGLGGGGGGGLGGGSGQGGGFGAGGGVGGGA----GGGGGLGGGGGGGIGGGSGHGGG 180
Query: 181 FGAGGGVGGGVGGGAGGGGGGGGGGGGGIGG--GHGGGFGAGGGVGGGVGGGAGGGGGGG 240
FGAGGG+GGG GGG GGGGGGGGGGGGGIGG GHGGGFGAGGGVGGG+GGGAGGGGGGG
Sbjct: 181 FGAGGGLGGGAGGGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGIGGGAGGGGGGG 240
Query: 241 GGGGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFG 300
GGGGGGIGGGSGHGGGFGAGGG+G GGG GGGGGGGGGGGGGLGGGSGHG GFG
Sbjct: 241 GGGGGGIGGGSGHGGGFGAGGGVG-------GGGLGGGGGGGGGGGGGLGGGSGHGSGFG 300
Query: 301 AGGGIGGGAGGGLGGGAGGGRG-GHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGGG 357
AGGGIGGG G G GGG GGG G GHGGG GIGIGIGVGIG GSGHGVGVGSGSGGGGGG
Sbjct: 301 AGGGIGGGGGAGGGGGIGGGSGIGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 324
BLAST of Cmc01g0008091 vs. NCBI nr
Match:
KAG6572290.1 (hypothetical protein SDJN03_29018, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 204.9 bits (520), Expect = 1.1e-48
Identity = 293/359 (81.62%), Postives = 299/359 (83.29%), Query Frame = 0
Query: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFG 60
MGGS KW SLGLL LCIVLHLSA LGDDKL+K+ FR DDDC WGRRCGGRFGGRGPRFG
Sbjct: 1 MGGSPKWVSLGLLALCIVLHLSAFALGDDKLDKSRFR-DDDC-WGRRCGGRFGGRGPRFG 60
Query: 61 RGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVG 120
RGGGFGGGRGGGF GGGRGGGLGGGSGGGFGGGGGVGG G
Sbjct: 61 RGGGFGGGRGGGF----------------GGGRGGGLGGGSGGGFGGGGGVGG------G 120
Query: 121 GGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGG 180
GGGG GGGGGGGLGGGSG GGGFGAGGGVGGGA GGGGG GGGGGGG+GGGSGHGGG
Sbjct: 121 GGGGLGGGGGGGLGGGSGQGGGFGAGGGVGGGA----GGGGGLGGGGGGGIGGGSGHGGG 180
Query: 181 FGAGGGVGGGVGGGAGGGGGGGGGGGGGIGG--GHGGGFGAGGGVGGGVGGGAGGGGGGG 240
FGAGGG+GGG GGG GGGGGGGGGGGGGIGG GHGGGFGAGGGVGGG+GGGAGGGGGGG
Sbjct: 181 FGAGGGLGGGAGGGGGGGGGGGGGGGGGIGGGSGHGGGFGAGGGVGGGIGGGAGGGGGGG 240
Query: 241 GGGGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFG 300
GGGGGGIGGGSGHGGGFGAGGG+ GGGG GGGGGGGGGGGLGGGSGHG GFG
Sbjct: 241 GGGGGGIGGGSGHGGGFGAGGGV---------GGGGLGGGGGGGGGGGLGGGSGHGSGFG 300
Query: 301 AGGGIGGGAGGGLGGGAGGGRG-GHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGGG 357
AGGGIGGG G G GGG GGG G GHGGG GIGIGIGVGIG GSGHGVGVGSGSGGGGGG
Sbjct: 301 AGGGIGGGGGAGGGGGIGGGSGVGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 322
BLAST of Cmc01g0008091 vs. NCBI nr
Match:
XP_023511646.1 (glycine-rich cell wall structural protein 1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 169.9 bits (429), Expect = 4.1e-38
Identity = 289/361 (80.06%), Postives = 298/361 (82.55%), Query Frame = 0
Query: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFG 60
MGGS KW SLGLLTLCIVLHLSAI LGDDKL K+ FR DDDC WGRRCGGRFGGRGPRFG
Sbjct: 1 MGGSPKWVSLGLLTLCIVLHLSAIALGDDKLGKSRFR-DDDC-WGRRCGGRFGGRGPRFG 60
Query: 61 RGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVG 120
RGGGFGGGRGGGF GGGRGGGLGGGSGGGFGGGGGVGGG GGG+G
Sbjct: 61 RGGGFGGGRGGGF----------------GGGRGGGLGGGSGGGFGGGGGVGGGGGGGIG 120
Query: 121 GGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGG 180
GGGG GGGGGGGLGGGSG GGGFGAGGGVGGGAGGG G GGG GGG GGG G G G G G
Sbjct: 121 GGGGLGGGGGGGLGGGSGQGGGFGAGGGVGGGAGGGGGLGGGGGGGIGGGSGHGGGFGAG 180
Query: 181 FGAGGGVGGGVGGGAGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGGGG 240
G GGG GGG GGG GGGGGGGGG GG G GHGGGFGAGGGVGGG+GGGAGGGGGGGGG
Sbjct: 181 GGVGGGAGGGGGGGGGGGGGGGGGIGG--GSGHGGGFGAGGGVGGGIGGGAGGGGGGGGG 240
Query: 241 GGGGIGGGSGHGGGFGAGGGI-GGGVGGGAGGGGGGGGGGGG----GGGGGLGGGSGHGG 300
GGGGIGGGSGHGGGFGAGGG+ GGG+GGG GGGGGGGGG GG GGG G GGG G G
Sbjct: 241 GGGGIGGGSGHGGGFGAGGGVGGGGLGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGVG 300
Query: 301 GFGAGGGIGGGAGGGLGGGAGGGRGGHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGG 357
G G GGG+GGG+GGG+GGG+G GGHGGG GIGIGIGVGIG GSGHGVGVGSGSGGGGG
Sbjct: 301 GAGGGGGLGGGSGGGIGGGSG---GGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGG 338
BLAST of Cmc01g0008091 vs. ExPASy Swiss-Prot
Match:
P09789 (Glycine-rich cell wall structural protein 1 OS=Petunia hybrida OX=4102 GN=GRP-1 PE=1 SV=1)
HSP 1 Score: 131.0 bits (328), Expect = 2.8e-29
Identity = 289/386 (74.87%), Postives = 309/386 (80.05%), Query Frame = 0
Query: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRR-C-GGRFGGRGPR 60
MG SQKW LL I L+AI L DDKL ++ + +D+ C +GRR C GGRFGGRGP
Sbjct: 1 MGSSQKWVIGLLLFSSIFFELTAITLADDKLEESRWGNDNGCGFGRRGCGGGRFGGRGPS 60
Query: 61 FGRGGGFGGGRGGGFGGGRGGGL--GGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAG 120
FGRG G GGG GGG GGG GGGL GGG GGG G G GGGLGGG G G G GGG GGGAG
Sbjct: 61 FGRGRGAGGGFGGGAGGGAGGGLGGGGGLGGGGGAGGGGGLGGGGGAGGGFGGGAGGGAG 120
Query: 121 GGVGGGGGFGG------GGGGGLGGGSGHGGGFGAGGGVGG--GAGGGVGGGGGFGGGGG 180
GG+GGGGG GG GGGGG+GGG+G GGGFGAGGGVGG GAGGGVGGGGGFGGGGG
Sbjct: 121 GGLGGGGGLGGGGGGGAGGGGGVGGGAGSGGGFGAGGGVGGGAGAGGGVGGGGGFGGGGG 180
Query: 181 GGVGGGSGHGGGFGAGGGV----GGGVGGGAGGGGGGGGGGGGGIGG--GHGGGFGAGGG 240
GGVGGGSGHGGGFGAGGGV GGG+GGG GGGGGGG GGGGGIGG GHGGGFGAGGG
Sbjct: 181 GGVGGGSGHGGGFGAGGGVGGGAGGGLGGGVGGGGGGGSGGGGGIGGGSGHGGGFGAGGG 240
Query: 241 VGGGVGGGA----GGGGGGGGGGGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGG 300
VGGGVGGGA GGGGGGGGGGGGG+GGGSGHGGGFGA GGGVGGGA GG GGGGG
Sbjct: 241 VGGGVGGGAAGGGGGGGGGGGGGGGGLGGGSGHGGGFGA----GGGVGGGAAGGVGGGGG 300
Query: 301 GGGGGGGGLGGGSGHGGGFGAGGGIGGGAGGGLGGGAGGG-----RGGHGG--GIGIGIG 358
GGGGGGG+GGGSGHGGGFGAGGG+GGGAGGGLGGG G G GGHGG G+G+GIG
Sbjct: 301 FGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGLGGGGGAGGGGGIGGGHGGGFGVGVGIG 360
BLAST of Cmc01g0008091 vs. ExPASy TrEMBL
Match:
A0A0A0K3J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043560 PE=4 SV=1)
HSP 1 Score: 256.1 bits (653), Expect = 2.1e-64
Identity = 327/361 (90.58%), Postives = 330/361 (91.41%), Query Frame = 0
Query: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFG 60
MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRG
Sbjct: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRG---- 60
Query: 61 RGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVG 120
GGFGGGRGGG GGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVG
Sbjct: 61 ---------RGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVG 120
Query: 121 GGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGG 180
GGGGFGGGGGGGLGGGSGHGGGF GGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGG
Sbjct: 121 GGGGFGGGGGGGLGGGSGHGGGF--GGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGG 180
Query: 181 FGAGGGVGGGVGGGA--GGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGA--GGGGG 240
GAGGGVGGGVGGGA GGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGA GGGGG
Sbjct: 181 IGAGGGVGGGVGGGAGGGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGG 240
Query: 241 GGGGGGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGG 300
GGGGGGGGIGGGSGHGGGFGAGGG+GGG+GGGA GGGGGGGGGGGGGGGLGGGSGHGGG
Sbjct: 241 GGGGGGGGIGGGSGHGGGFGAGGGVGGGIGGGA--GGGGGGGGGGGGGGGLGGGSGHGGG 300
Query: 301 FGAGGGIGGGAGGGLGGGAGGGRGGHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGGG 358
FG GGG+GGGAGGG GG GG GGHGGGIGIGIGIGVGIG GSGHGVGVGSGSGGGGGG
Sbjct: 301 FGGGGGLGGGAGGG-GGIGGGAGGGHGGGIGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 343
BLAST of Cmc01g0008091 vs. ExPASy TrEMBL
Match:
A0A1S4E0F3 (glycine-rich cell wall structural protein 1-like OS=Cucumis melo OX=3656 GN=LOC107991344 PE=4 SV=1)
HSP 1 Score: 226.9 bits (577), Expect = 1.4e-55
Identity = 263/357 (73.67%), Postives = 264/357 (73.95%), Query Frame = 0
Query: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFG 60
MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFG
Sbjct: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFG 60
Query: 61 RGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVG 120
RGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGG +
Sbjct: 61 RGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGRNR------------------ 120
Query: 121 GGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGG 180
Sbjct: 121 ------------------------------------------------------------ 180
Query: 181 FGAGGGVGGGVGGGAGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGGGG 240
GAGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGGGG
Sbjct: 181 -----------VEGAGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGGGG 240
Query: 241 GGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFGAG 300
GGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFGAG
Sbjct: 241 GGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFGAG 268
Query: 301 GGIGGGAGGGLGGGAGGGRGGHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGGGH 358
GGIGGGAGGGLGGGAGGGRGGHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGGGH
Sbjct: 301 GGIGGGAGGGLGGGAGGGRGGHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGGGH 268
BLAST of Cmc01g0008091 vs. ExPASy TrEMBL
Match:
A0A5N5NQZ7 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_003432 PE=4 SV=1)
HSP 1 Score: 169.5 bits (428), Expect = 2.6e-38
Identity = 292/373 (78.28%), Postives = 306/373 (82.04%), Query Frame = 0
Query: 4 SQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFR-DDDDCRWG-RRCGGRF--------- 63
S KW S LL LC VLH SAI LGDDKL+K +R DDDDCRW RRCGGR+
Sbjct: 5 SLKWVSFLLLLLCTVLHFSAITLGDDKLDKTRYRDDDDDCRWNPRRCGGRYGRGGGGGLG 64
Query: 64 --GGRGPRFGRGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGGSGGGFGGGGG 123
GGRG FG G G GGGRGGG GGG GGGLGGG G G GGG G G GGG GGG GGGGG
Sbjct: 65 GGGGRGGGFGGGAGGGGGRGGGIGGGGGGGLGGGGGRGGGGGGGLGGGGGRGGGAGGGGG 124
Query: 124 VGGGAGGGVGGGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGG 183
VGGGAGGGVGGGGGFGGGGGGG+GGGSG GGGFGAGGGVGGGAGGGVGGGGG GGGGGGG
Sbjct: 125 VGGGAGGGVGGGGGFGGGGGGGVGGGSGQGGGFGAGGGVGGGAGGGVGGGGGSGGGGGGG 184
Query: 184 VGGGSGHGGGFGAGGGVGGGVGGGAGGGGGGGGGGGGGIGG--GHGGGFGAGGGVGGGVG 243
VGGGSGHGGGFGAGGGVGGG GGG GGGGG GGGGGGG+GG GHGGGFGAGGGVGGG G
Sbjct: 185 VGGGSGHGGGFGAGGGVGGGAGGGVGGGGGSGGGGGGGVGGGSGHGGGFGAGGGVGGGAG 244
Query: 244 GGAGGGGGGGGGGGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLG 303
GG GGGGG GGGGGGG+GGGSGHGGGFGAGGG+GGG+GGGA GGGGGGGGGGGGGLG
Sbjct: 245 GGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGLGGGA----GGGGGGGGGGGGGLG 304
Query: 304 GGSGHGGGFGAGGGIGGGAGGGLGGGAGGGR-----GGHGGGIGIGIGIGVGIGSGSGHG 357
GGSG GGGFGAGGG+GGGAGGGLGGGAGGG GG GGG G+G+G+GVG+G G G G
Sbjct: 305 GGSGRGGGFGAGGGVGGGAGGGLGGGAGGGAGGGRGGGAGGGFGVGVGVGVGVGVGGGAG 364
BLAST of Cmc01g0008091 vs. ExPASy TrEMBL
Match:
A0A6J1JK95 (glycine-rich cell wall structural protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486564 PE=4 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 1.5e-33
Identity = 270/356 (75.84%), Postives = 280/356 (78.65%), Query Frame = 0
Query: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGPRFG 60
MGGS KW SLG L +CIVLHLSA+ L D KL K+ FR DDDC WGRRCGGR+GGRGPR+G
Sbjct: 1 MGGSPKWVSLGFLVICIVLHLSALALADKKLEKSRFR-DDDC-WGRRCGGRYGGRGPRYG 60
Query: 61 RGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVG 120
RGGGFGGGRGGGFGGGR GGGSGGG GG GGV GGGVG
Sbjct: 61 RGGGFGGGRGGGFGGGR--------------------GGGSGGGLGGDGGV----GGGVG 120
Query: 121 GGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGG 180
GGGGFGG GGGSGHGGGFGAGGGVGGGAGGG GGGGG GGGGGGG GGGSGHGGG
Sbjct: 121 GGGGFGG------GGGSGHGGGFGAGGGVGGGAGGG-GGGGGGGGGGGGGNGGGSGHGGG 180
Query: 181 FGAGGGVGGGVGGGAGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGGGG 240
FGAGGG+G G GGG GGGGGGGGGGG G G GHGGGFGA GGGVG GAGGGGGGGGG
Sbjct: 181 FGAGGGIGSGAGGG-GGGGGGGGGGGSGSGSGHGGGFGA----GGGVGSGAGGGGGGGGG 240
Query: 241 GGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHGGGFGAG 300
GGGG GGGSGHGGGFG GGG+G G GGGGGGGGGGGGGGGGLGGGSGHGGGFGAG
Sbjct: 241 GGGGSGGGSGHGGGFGVGGGVGSG-----AGGGGGGGGGGGGGGGGLGGGSGHGGGFGAG 300
Query: 301 GGIGGGAGGGLGGGAGGGRGGHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGGGG 357
G G G+GGGLG G G GGHGGG GIGIGIG+G+GSGSG GVGVGSGSGGGGGG
Sbjct: 301 G--GAGSGGGLGHGGG---GGHGGGFGIGIGIGIGVGSGSGRGVGVGSGSGGGGGG 308
BLAST of Cmc01g0008091 vs. ExPASy TrEMBL
Match:
A0A6A1UNB2 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G005366 PE=4 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 4.7e-32
Identity = 262/360 (72.78%), Postives = 284/360 (78.89%), Query Frame = 0
Query: 1 MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWG--RRCGGRFGGRGPR 60
MG S KW SL L+ LCIVLH+SAI L DDK++K + DDDDCR+G RRCGGR+
Sbjct: 1 MGVSSKWLSLSLIVLCIVLHMSAITLSDDKVDKTRY-DDDDCRFGGRRRCGGRW------ 60
Query: 61 FGRGGGFGGGRGGGFGGGRGGGLGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGG 120
GGRGGGLGG GGGLGGGRGGG+GGG+
Sbjct: 61 ----------------GGRGGGLGG--GGGLGGGRGGGIGGGA----------------- 120
Query: 121 VGGGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHG 180
GGGGG GGGGGGG+GGG+GHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHG
Sbjct: 121 -GGGGGLGGGGGGGVGGGAGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHG 180
Query: 181 GGFGAGGGVGGGVGG--GAGGGGGGGGGGGGGIGG--GHGGGFGAGGGVGGGVGGGAGGG 240
GGFGAGGGVGGG GG GAGGGGGGG GGGGG+GG G GGGFGAGGGVGGG+GGGAGGG
Sbjct: 181 GGFGAGGGVGGGAGGGIGAGGGGGGGSGGGGGVGGGSGQGGGFGAGGGVGGGIGGGAGGG 240
Query: 241 GGGGGGGGGGIGGGSGHGGGFGAGGGIGGGVGGGAGGGGGGGGGGGGGGGGGLGGGSGHG 300
GGGGGGGGGG+GGGSGHGGGFGAGGG+GG GGG GGG GGGGG GGGGGGG+GGGSGHG
Sbjct: 241 GGGGGGGGGGLGGGSGHGGGFGAGGGVGG--GGGVGGGLGGGGGAGGGGGGGVGGGSGHG 300
Query: 301 GGFGAGGGIGGGAGGGLGGGAGGGRGGHGGGIGIGIGIGVGIGSGSGHGVGVGSGSGGGG 355
GGFGAGGG+G GAGGGLGGG G GGHGGG GIGIG+G+G+G+G+G G G GSGSGGGG
Sbjct: 301 GGFGAGGGVGSGAGGGLGGGGG---GGHGGGFGIGIGVGIGVGAGAGQGTGSGSGSGGGG 312
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_011659702.1 | 4.3e-64 | 90.58 | glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN43514.1 hypoth... | [more] |
XP_016901706.1 | 2.8e-55 | 73.67 | PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo] | [more] |
KAG7011907.1 | 6.7e-49 | 82.17 | hypothetical protein SDJN02_26814, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6572290.1 | 1.1e-48 | 81.62 | hypothetical protein SDJN03_29018, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023511646.1 | 4.1e-38 | 80.06 | glycine-rich cell wall structural protein 1-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
P09789 | 2.8e-29 | 74.87 | Glycine-rich cell wall structural protein 1 OS=Petunia hybrida OX=4102 GN=GRP-1 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0K3J8 | 2.1e-64 | 90.58 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043560 PE=4 SV=1 | [more] |
A0A1S4E0F3 | 1.4e-55 | 73.67 | glycine-rich cell wall structural protein 1-like OS=Cucumis melo OX=3656 GN=LOC1... | [more] |
A0A5N5NQZ7 | 2.6e-38 | 78.28 | Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_003432 PE=4 SV=1 | [more] |
A0A6J1JK95 | 1.5e-33 | 75.84 | glycine-rich cell wall structural protein 1-like OS=Cucurbita maxima OX=3661 GN=... | [more] |
A0A6A1UNB2 | 4.7e-32 | 72.78 | Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G005366 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |