Cmc00g0001701.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc00g0001701.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase domain-containing protein
LocationCMiso1.1chr00: 2111744 .. 2121725 (-)
Sequence length9982
RNA-Seq ExpressionCmc00g0001701.1
SyntenyCmc00g0001701.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTAGTTTCATTCTTATCAATTCCATCGATCCAGGTCTCCTCATCCTATAGAATAGATAGGGAGAGAGAGAAAGAAGACCTGTGCTCTACTTTCTTTTCCCCATCCCGCCTCTGATTTTTCTTTGAATCCGAATTCAATGGCTTTCCCGATTCCGGGAAGGAATCTTTGAACCGCTCCGTGGGATCAATGCTTTTTCTATATTAGTCAAAATGCACAAAACCCACTCGGCTATAGGCGAGCGTAAATCATCTCAAATCCAACTAAATCATATGAGTTCGCTCTCAGTCCTGGTCGGATTAGTGAAAAGACCATTTTCAGAAGGGTATGGTATGAAATTGAGTTGAGGCTCAAAGAATATTGAGTTCGTCGACTGAAGGAAGGCTGAATCTAATTGAGAAGGGACGGAGTGGGAAGAGCCGTCCAAAAACAAAGGCGCAAAGAATTTGCGAAAAACCTCTCCTTGGACTTGTTAATTCCATACTTCTGCTTCCAAATTAGTAGGAAGAGTTGGTATGAAATAGACTAGGAAAGAGCTATTCAGAGAGAAATCGACCATAGAGATCTCGGAACTGAGTTCACCAGTCTTGGGGCTGGGTTTCAGGAAGTTTGAGGCATTAATGAAACTACCACGGACCGTAGCTCCTGAATCTGCCCTTGAAACTGAATCAGCTTTCCCGGAGCGTAGCTACTTAATCAGCTCTTGAAACTTCATGGAGCGTAGCTCCTGAATCTGCTTTCCTTGAAACTGAATCTCTACTTTCCCGGAGCGTAGCGACTGAATCCGCTTGGGACTGAATCTGCTTGGGTTAGGAGCGTAGCCCAGTAGTAGTTCCCCTTCCTTCTTGAGTAGTTCCCCTTCCTTCTTGCTTACCTCGGAAACCGAGACTGATCTCCACTGAGAATGAAAATCGGTCTCTGCCTTCTCCGAAGATCTACACATATCATACTAAGGATTGATCTGATGCTGCTTAATAGTACTTATCAATCCTTTCCCTCTTCGCTCTACGGATTCCTCTTTCTCTTTGACTTAGTCTAGCAAATCAATTCCTCAACCGATCATTGTGATAGCTTCCAATCCGGTCGGGATAGTCAATCCCTGTCTTCTTCTTAGTTCAGTTACCTCTGCCTCCCCCACTCTCCAACAAAGCAGGAACCCATCCTTTCCTCCAACAAAGCAGGAACCTACACTCGTATCCTTCTGAGAATGAGAACAGTTATTCATACAATTACCTCAAGACTCATAATCCTACTCTCGCGGCTTCTCAAATTCTTTGACCCTGCCCCGATCGAGACTGATTATGAAATGGGGCACAAGGGTCGATCTGACGCTTTAGGCTAGTCCCATTCTCTTACTCACTCAATCAGGGTTAGCTGCTGTAGACCTAGGGTTAGCTGGCCTTGTCGAGTGGCTTCTCCCCTATCCTTATGGGTCTCTTCCTCTTTCTTCCACTAAATCCGGTCTGGTCTGGCTGACAAGACCTATTTCTTCTTCGTAAATACCAGGAAGAGGATCAATGAAATATGATTGATGCCTCCTAATCATCTCAAAATGGAGGATTTGATGGCCAGTCAAATCAAAAAGATGAACTCAGGGATGGGACATCTTTCTATCTTAATCAATCCCTTTAATTAAGCCTATTTTGGGCAATAGAGATAGCTGCAAAAGCAGAAACTTCCCTTGAAACCGCAAGAAGGGCAACTGCCACTTCAACGGCTACTTCAACAACTGAGACTGATGCCGATACGGTCTCATGAAACCTCTAATTCCCTGTCTTCCTACAACCTATCCTCGTTCAGAAAGGGATGAAATCGTATGATCGGTCTCGCGTCTTTCCCGTTGAGATCTCTTGGGGAGCTAACCTGTCTGCCTCTTCGCGTGCGGGTCGAGCGCCTCGTCTCGAGTTTAGTTTCTTTCTCCGGCCTCTTTTGTCTAGTTTGTCCCAGATTCTACGGATTTGTCTTATTCATCCAGTCATCCTACCTACTCCTTCAGAAATTCTACTAGATAATAATGTCTTTGCAAGAAGGAAAGCCGTCAGTCAACGAACTCCTTCCCCTTTCTTATTCAACTGGGGGCTCACAGGGGTTTGATCTCATATCTAGTTCAGGCAGGGCAGTTCGATGAGATCTGATTTGATATTCTATTCGTCTCTGGGGGTGGTGGAGGTGGCCTCCTTTCTGATCTTGCACCGTAGGCTTTCTTTCTTCTTTTCTTGGCGGCTATATGCCTTTCTTTGTGGCCTATGCATCCTTTTTTCACGCCCTCTTCAATCTATCCTCGTCCTGGTCGAGCTATCACTACTGCTGGAGAGAACATTTCGTAGATCGGCTACTAGAGAGCAACTACTAGAAAGAGATTCTCCAATAGTGATCCTATATCCCGAAATGGGGAATGTTCTCAGAATGCTAATCTCCTTCTTTATCGCTCATCTGCTTGCTTCCTAAACTCTTTCTAGGGTCGGTATAGAGAGAGAAGCTACCCTTCCTAAGTAGGGAAGAGAGAAGAGGTTCGGGTGGGTCGGCTCTATGACCAGCTCTTTCGGTTGAGGAGATAGGAAAGACCCCCACGTAGCGGGAGAGGATGCAGGCAGGAAAAGTCGCTTTTGACTTCGATCAGTAGGTAGGCTTTCCTTGTTCATTGATCTGATAACTGTTCTCATTAGCAAATTCTGAACTCTTATCTTCAAGAAAGAAATCCCTAGGCTTTTTTCTTAGAGGTCCTTAGATATCAGTTCCATTAACAAGTCCTTCGGACGGGCAAAGAAGCTTCAAACTGTTCTCAGCGAAAGGTCCCACCCGGGCCAGGCAGCTCGAACCAAGACAGATCGGATCGGGGAAGCTAGGGTGAAAGAGTCTCCCTCCGAGGCTCTTGCTAGGGGAAAGCCAAGACCAGAGGCTAAAGAAATTTCCTACTCTTTGAACCGGTACGTGGTAGTTTAATTGCTCTTCTTGCTTAGTTTAGTTATGCCTTATTCATTCCTTATTCATGCATTGGCGCGAGGCTGATTTCTCTTCATCCTGTTCCCGTAAGACCCGAAAGATGATGATTCGGAGTTAGAGTAAGAAGAAAAAGGAGAATAGGCTCGATGCTGGGTAGGTTTAGGATGCGACCGAGTACCCTTATTCGTTATGCTCCTTGACCGAAGTTTCTCTCTTTCCTGATTTTCTAGAAAAATGAATAGGTTTCCGAATAGGAAGAAGTACGTACTTGAAGTTCTAATAAGCCTCATCTCTTCTAAGGGAACTAAATAATAGGTTTAGGGGCTGCTATCCCTAGGTCGGGGAATCGGGCAAGGTCACATCTTCAGACTGAGTCTGCTCTCTCCCTTTCATCAGAGTCTGGTTGGGATCAGGTCGGAGCTCTATTCTCAGTCTCGGAATCGGTTAGGGTCGGACAAGCATTCCCGAGTCGAGTACGGAACTGAAATAGGTCGGAGGTCGGTTAAGTGCTCTTTCTTAGTATTCTCTCTTTCATAGGATTTGGAAGCCAGACCAGACCGACCGGCTAGGTTCTTTCGTCGGATTAGGAGTCTTCCTTCCCGGGGACATGGGTCTTCCCACTACGCCTTTTCTCTCTTTCATCAGTCTTCTCAGAAGCTAGACCGACCGGCCGAGTTGGAGCAGCCGAGACCGAGTCTGAGGAAGAGTCCTACCTTCCATTATCATAAAGAGGAATGAGAAAGAATTCTCTCTTTCCGTCAGTCTGTCTCCATGGGACTCTGATAGGGTAGGGAATGAGTTCTAATTCTCTAAGTTCAGTTAGCTTTCTTACTCAGAAGGTAGAATACGACCGTAAAGCCGCTATCCTGGTTCGGGGCTAAGCTGTGCTTTACCGAGAAAGAGCTGCTGAGTTGGAGTTTGACAGGTAACTGAAATCGGACGAAAGGGAAGAGAAGGCTCCGTAAGGCGCGAAGCGAAACGACTGTGAAGGAGTGCATTATGTTTATATGGATTTCTTTCGTTGCACTCCTGAATTCTAATATAAAGAAGGAGCGAAGTCAAAAGTAGTTTCAGATATAGGAGAGGAGCGAAGGTACTCGTAGTTTCAAATATAGGAGAGGAGCCCGACGATTATTATGTATTATGAAATTCTTTATATGGATTTCTTTCGTTGCACTCCTTCAATAATTCAGTCGTTTCGCCTCAAATTCTTTGACCCTCTCCTCTCCTTATCAGTCGAGTTTCTTCGAACCTTATTATTTGGAGAGCTATTTCATAATGCACTCCTTCTTTAAATCAGTCGTTTCGCTTCTCCCCTCTCCTTATTATTTTGAGAGCTATTGAATAATACCACTCCTTCAATAATACAGTCGTTTCGCTTCTCCCCTCTCCTTACAGTCGAGCTATTTCATAACCTCCGGACGACTCCAGAATCAAGTCAAAGACTGATCTCAGTCTTAATTAAAGACTTCCTTATTTAGAAGGAGCCCGACGATGGACCTTTGCCCCTCTCCTATATCTGAAACTACGAGCACCTAGCTAGGAGCAAAGAATTTGCGAAAAACCACTCAAAAAAGTCCGAAGGAGGGACGTAGGACCAGACCACTCAAACCCGCTCCGTAGTGGGCATTGACTGCCGATGCGTATGATTGGTAGAGCTTTCCTTGATCCTCTTGGTGGGGAGTCCCTAGCCTCTGTCCTTGTCCCATAACTAATACTGATTGATGAATCCCTTATTTCATCCTACTCCTCGTTCATTCATTCTACGAGAGAAAAGAAATAGCAAAGCGGATGAAGCATGAAACCACTGAATCAAGAGCAAGCCCTTGAAACCCCAACTTCCACAACTGGCCTAAACCAGAGGGAGAACTGCCTTGTGAGGGTAGAGGAGAGGATTGAATTTCAGTATTGGGTAAAAGAGCTGAGCTCCGAAAGAAGGTCAGAGAGCTCGCCCCGATTGTCTTGTGAGATGGGTTCTTTTGACATCAAATAAAGAAAGCAAATGACATCAAATAAAGAAAGCAAAAACGGTAAGTAGGTTTTAGTAGGTTCGTCTTCTCTGGCTTCTTGCTGTTAGTAGAAAGCGATGGTGAACAAGCTGAAAGAGGGACTTTCCATTCACTTCTGAACTTGAGAAAAGTCTTTATTCACTGACTTTCTTTATTCACTTCAATGAACAAGGTCTCGACTGAAAGGAGAGAAACCCATTATCTGAATATGGGATTCTTTCTGGAGCGGGAATCTTTCTTCAATTCTTTGTTCTCATCATCCCATTTTGACCGGCGTAGAAGGAGACCTCTCATGGCTGATTATTCGACGAAGTCGGATTCCTTTCTTATTGCAGACTTTTGAGTCCTCCGTCTGACCTTTCTTCCACAGGTTGAATCACCTTCACTGAAAATGAGATATCTGGAATCATGTGAAAGGTAGATAAAGAGAAGTTAGCATTTGAAGATGAAATTCGGAAAGATCAATCATCCTCACCTTCTCCTCTTAGCACTCCTTTACAGTCCAAATTGACTATCATTTTTTTCTTCTTTCTCTCGCACTCCTATTCTTTGAGTTCCATTCTGAGTTGCACTCCTTCAAATTTCAAGGATAAGGACCCACAAATTCTTTGCGCCTCGCCTTTCAGTCGAGCCTCTCCTATATCTGAAACTACGAGTACCTTCGCACCTTTCAGTCGCAAATTCTTTGCTCCTACTCCGCCTTGCGCTCCATCTTTGACTTAGTGGATCAAAGAGGCTCAAAGGATTTGAGTCGCTTCGATCATTCCACTAAAAGACTAGTCACCTGGACCTTTGAAATTCAAGCAGTGAGGACTAGCTTAATTAGTTTCCATATTCACAAATCTACCATATTCACGAACCTTGTCTTCTTCTTTCACCTTCCTCTTCTGAAACCTCTTTAGATAAAAAAGATCTTTTTCTTCCGTCTGCTCTTATTTCATCTGAAACTCTAAGATCAAGCCCTTGTTCATTGAGTTGTCTTTCTTCTTTGTATCTTCCTTTCTAGTTTTTTCTAGGCTTTCTTTTCTTCCTTTTATCTTCCTTTAAGCCCAAAAAGTAGGTTCATATGGACGACTTGACTCTCGTATAGGTCGGATGTTTCCGTGAACAGTAAGCAGCGGATCTCCCCTGATTTTGGGAAAGCTGGTGGCCGCGTGTGAATTCTTTCAAGGCAAGGGGCCTGATCGACATTCTTGTTTACTCTGATCCGGTCGAGGTGGTTTTCCTTTACCAGCGCGTAGGTGGTCTCAGTTCCTATGACCGAGTCTTTCTGGCCCCTGTGAACATCTTTTTTTCATGTATTAAAGAGGGCCTCTCTAACCGGTGAAAAGTGGTGGGTGTCCACTAACGGCCATTCCTGGCTCGGCTCCGATAATGCAATTCCGGGAGGAGTCGGTAGTTGGGCACTGGATCCCTTCGGACCTGGAGAACGTGGGACGCTGGGTCGGGGTTTGGTGAACCGGTCGCTCTTCTCCTTGACAGTTGAGTTGCTTTGCTCCTGTAAAGAGAGAATGAAAGATCGAATTCAGAGATCATGAAAGATCAAGTCTTTTTTTCTCTTTCTCTTTCTTTCTCTACAACTCTCATCTCAAAAGGGTCGAGTTCCTTCGCTCTGCGACTCGTCTTTCAGTATCGGGCCCCTTTTTCGTTGCCTAGGTTACACCTTCGGAATACCCCATCAGGGAATTTCGCTCTACTTCCCTCAATCTTCACTTTACGCCACGCCGACTCCCCTTTCGTCATAAGGCGTGGAATTAGACCAAGGGGAATCTCCATAGGAACTAGTCCGATTTCGCACGTAGGAGATCGAGACACCAGGGCTATGGACAAAGATGTAGATCGATCGCCCTATCTCGACAACTACATAGAGGGTCTGACCTTGTATATATATACTTGGATTTCCCTACTTTCATCCTATATATTAGCCGACCTTCCGTTTGAGTTCCATGAATGAGTCCGACCGCTAAGTGGGAATATGGCCGGATTCAAGGACGGACCCATTTGATCCACTAAGGAAAAGATGGAACTCAAACTTCCGCCTCAATGGATCTGGATAGCTTTCTTTGCTTTCCTTTTGGACGGAGGCATCTCAAATTCTTTGAGCCTTGATTGAACCTTCTTTCTTGCTCTGGGAGTCCTACAGATAGGCTTGGAATTTCTTCCATTTTACTAAATCATTTCTTTCTCAGAAAGGAGATTTTGAGATATCGGTAGTTGTCCGGTCGTACCCAAACAGTAAGATTCCAGAGGAAAATGCACCTAAGATCAAATATTTCGAGCCGGCTTCCGTGGAAAATTCTGACTTTCTTTTTGATGCTGCCATCACATAAAAACATAAACTTTGAGGCTCAATAGCTAAATACATGGAAATTGAATCATGAGCCGAGATCATAAAGAGCATACTGCGAGTAGGAAGTGGAATTAATACAATGAATTCAAAAGCATCAAACCTCTCTTTAAAGAAAGAATCGAAACACATCGAAATGGTACCAGCCGTACTTAATAATAGAAGTATTTGGCAGAAATATGTCAAATTGTCCCTCCTCAAAAAATGATTCCAGAATAAATGGGCAATAGTTAGGAGAGGTGCGCCAGCGGCGAGCAGAAGCAAGGTTATTAGATACCGCCTCAATGAACAAGGCTCCGTAAGGAGTTGACGGCCAGAACCACACGTGCAAGTTTCCCTGCATGTGGCTCGTCCGTGATAACTTCTTCGGATTTGCGTGAACTAGCGGACCGATCTGGGGATGCTCCCTCCAGCATGAGCGAACCTTTTCGGAACTGGTTAGGAATGGGGGCCACGAGACCAGCCCGAATCCAGCCAGGTTCTATTTCTCATGTCCCCTTCCCAACAATTCTACCTTGTCTTGGGGCCTCTTTGGCTTGTAGAGAGAAAGCCCGCCTCCGCTCCGAAAAAAGTCTGTCTCTTCCCTTTGTTCAAAGAGGAGGTGCGTCCACAGAAGAGGAAAGAGCAATGCATCTTGCTCAGCAGGCGTAGCTTGGAGTGGGAGTGCTAATTAAACTACCACGGACCTAGGCTTGAACTTTCTGGGAGTCTGAATGGAAGGCAAACCGGCCTATTAAGCGCAGCTAAGCGACTAATTAAGCTAGCACGGACCGGAGAAAGCCAGGTGCCGGAGGTCAGCTCTATTCGGCCCGGAGCATTGATTCCCCATAACGAAGAGGCTAGCTCGAGATCTCAATTGCCTATCCTGTGCTCGAGAAGGTCCCCCAGTTCCTCGGCAGCACCTCGAGGTTCATTTTGATGTCTTAGATGAGACTCGGGATATTCCTCACTCCATGGCATGGCACCTTTCGCTCATCCATTCCGCCCGTCCAGACGCTGAGCCCTTTTTTCATTATCATCTACCGCCCTTTCTTTCCTCCCGGCTATTCACGCATGAAGATCGTCGTATGTATGCTCGACTTCGGTTGCCGGTGCTATAGGTAGGAGTACATTATGGCAGGATCAGTCACCCGGGCAAACCAACCCTCCTCCGATCAGAATTGTGCTATGCCCCCCCGATCCCTATAGAGCGAAAGAGCTGCCTGGTGATCCCTAGGTTGCAGCACGTCCGGTCGTGAACTCCTCCGCTGCCGCCGTTTCTAGGACCGACCGACGCCTCACCTGCACAGGTACCTACGTAGTGTAGTGTCGGTCGCACATTCAACATAGCGTTCGGACTCATGTGCCTTCCAGAACCAGGGGTCTTCGAGCCTGCTGCGTACGATTAGCCAGCCTTGCGGCGGCAAAAGGATTAGACGTCCCCCCATGCTACGGTTCCCTGCGGCCCGAACCCGGTCCCGCATTAGGTTAGGGAGTTGGGCGATAATAGCTCCTCCGCATCCCAAAGCGCGCTGCCCTCCTAGGCGCGCAACACTAAGTAATCCAAGCCAACCCACATTACTGACTAACGGTGGATAAGAATCTTTCTTAGAGGTACTAAATACAACTCCATGAATGAGCAAAATGAAAGTAGCATTAATTAGAAAGATCTCTGGGGAAACCGCTAAAAAAAGATTGAACATGTGGGATGGATGTGGGAGGATCCGAACGAATTCTGCTTTCATTTCCCCCGTATAGAGCACTGAGTTACTTACGTTACGGTCTTCAACAGGCAGGCTGCACTGACGACCAAGCAACAAAACTAGAACAAAAAAGAATACAATAAACTAACGAGTCTGATTTTTGATTGTAGTTTTGATTGTTGTTTGAGTGGATTGGGGCGGAGAGGGCGGCTAGGAGAGGAGGGATCGCTAGACCAGCAGCCAGACCAAGAATGAATGTGTAATGATTGTGATTCCACACCAAGAAAAAGAAAGAATTGAATGTCGAAAGGGGATCCTAAACGAAAAAGGAGTCCATGACCCCGCGTATAAGGAGAGGTCGAATTCCAAACAAAGCTTTCCCCTGAACCTCTACAACTCGGTAAAGCTGCTTCTAACCTTGAAACTAATAAGGAAACCCCTATACATGAATTTCAGGCGGATGAAAGGATAGGCTTGATTTAGTAGGTTTAGAAGTTGAAGTTCTCAAACTAGAGAAAGTTGGAAAGTTTCAGTTCCATAAAGGGAAAGCCTATCCAACAACTCAATTCCATAAATCAGTCCAAGGAAAGAGAAGTCCTAGTTCAGTTTGAGTTCCATCTTTTAGTGGTCCGAAGTGGAATATGGATTTCTGTTTTTTAGCCTTTATTCATTGATTCAGAATAAACAAGGGTCCGTCCGAAGGTTCAGGGAAGAACTCGACTCCCACGGGGCGGTTCTTTGAAAGTCGACTGATAAGGAGTCAATGAACAAGGAATTTCATAAAGAAAGCGAAAGGACTGAATTATCATATTTTCAGGAGCCCTTTATTTGAAGAAATAGCTCTCCAAATAATAAGGTTCGAAGAAAGTCGACTGATAAGGAGAGGAGAGGGTCAAAGATGAATAAAGAAAGCGAAGTCCTTATCCCTTATTTTGAGCCCTTAGATTAGAAATAACTCGACTCAAAAAGATAGGGTGCGAAGGTACTCGTAGTTTGAAATAGA

mRNA sequence

GGTAGTTTCATTCTTATCAATTCCATCGATCCAGGTCTCCTCATCCTATAGAATAGATAGGGAGAGAGAGAAAGAAGACCTGTGCTCTACTTTCTTTTCCCCATCCCGCCTCTGATTTTTCTTTGAATCCGAATTCAATGGCTTTCCCGATTCCGGGAAGGAATCTTTGAACCGCTCCGTGGGATCAATGCTTTTTCTATATTAGTCAAAATGCACAAAACCCACTCGGCTATAGGCGAGCGTAAATCATCTCAAATCCAACTAAATCATATGAGTTCGCTCTCAGTCCTGGTCGGATTAGTGAAAAGACCATTTTCAGAAGGGTATGGTATGAAATTGAGTTGAGGCTCAAAGAATATTGAGTTCGTCGACTGAAGGAAGGCTGAATCTAATTGAGAAGGGACGGAGTGGGAAGAGCCGTCCAAAAACAAAGGCGCAAAGAATTTGCGAAAAACCTCTCCTTGGACTTGTTAATTCCATACTTCTGCTTCCAAATTAGTAGGAAGAGTTGGTATGAAATAGACTAGGAAAGAGCTATTCAGAGAGAAATCGACCATAGAGATCTCGGAACTGAGTTCACCAGTCTTGGGGCTGGGTTTCAGGAAGTTTGAGGCATTAATGAAACTACCACGGACCGTAGCTCCTGAATCTGCCCTTGAAACTGAATCAGCTTTCCCGGAGCGTAGCTACTTAATCAGCTCTTGAAACTTCATGGAGCGTAGCTCCTGAATCTGCTTTCCTTGAAACTGAATCTCTACTTTCCCGGAGCGTAGCGACTGAATCCGCTTGGGACTGAATCTGCTTGGGTTAGGAGCGTAGCCCAGTAGTAGTTCCCCTTCCTTCTTGAGTAGTTCCCCTTCCTTCTTGCTTACCTCGGAAACCGAGACTGATCTCCACTGAGAATGAAAATCGGTCTCTGCCTTCTCCGAAGATCTACACATATCATACTAAGGATTGATCTGATGCTGCTTAATAGTACTTATCAATCCTTTCCCTCTTCGCTCTACGGATTCCTCTTTCTCTTTGACTTAGTCTAGCAAATCAATTCCTCAACCGATCATTGTGATAGCTTCCAATCCGGTCGGGATAGTCAATCCCTGTCTTCTTCTTAGTTCAGTTACCTCTGCCTCCCCCACTCTCCAACAAAGCAGGAACCCATCCTTTCCTCCAACAAAGCAGGAACCTACACTCGTATCCTTCTGAGAATGAGAACAGTTATTCATACAATTACCTCAAGACTCATAATCCTACTCTCGCGGCTTCTCAAATTCTTTGACCCTGCCCCGATCGAGACTGATTATGAAATGGGGCACAAGGGTCGATCTGACGCTTTAGGCTAGTCCCATTCTCTTACTCACTCAATCAGGGTTAGCTGCTGTAGACCTAGGGTTAGCTGGCCTTGTCGAGTGGCTTCTCCCCTATCCTTATGGGTCTCTTCCTCTTTCTTCCACTAAATCCGGTCTGGTCTGGCTGACAAGACCTATTTCTTCTTCGTAAATACCAGGAAGAGGATCAATGAAATATGATTGATGCCTCCTAATCATCTCAAAATGGAGGATTTGATGGCCAGTCAAATCAAAAAGATGAACTCAGGGATGGGACATCTTTCTATCTTAATCAATCCCTTTAATTAAGCCTATTTTGGGCAATAGAGATAGCTGCAAAAGCAGAAACTTCCCTTGAAACCGCAAGAAGGGCAACTGCCACTTCAACGGCTACTTCAACAACTGAGACTGATGCCGATACGGTCTCATGAAACCTCTAATTCCCTGTCTTCCTACAACCTATCCTCGTTCAGAAAGGGATGAAATCGTATGATCGGTCTCGCGTCTTTCCCGTTGAGATCTCTTGGGGAGCTAACCTGTCTGCCTCTTCGCGTGCGGGTCGAGCGCCTCGTCTCGAGTTTAGTTTCTTTCTCCGGCCTCTTTTGTCTAGTTTGTCCCAGATTCTACGGATTTGTCTTATTCATCCAGTCATCCTACCTACTCCTTCAGAAATTCTACTAGATAATAATGTCTTTGCAAGAAGGAAAGCCGTCAGTCAACGAACTCCTTCCCCTTTCTTATTCAACTGGGGGCTCACAGGGGTTTGATCTCATATCTAGTTCAGGCAGGGCAGTTCGATGAGATCTGATTTGATATTCTATTCGTCTCTGGGGGTGGTGGAGGTGGCCTCCTTTCTGATCTTGCACCGTAGGCTTTCTTTCTTCTTTTCTTGGCGGCTATATGCCTTTCTTTGTGGCCTATGCATCCTTTTTTCACGCCCTCTTCAATCTATCCTCGTCCTGGTCGAGCTATCACTACTGCTGGAGAGAACATTTCGTAGATCGGCTACTAGAGAGCAACTACTAGAAAGAGATTCTCCAATAGTGATCCTATATCCCGAAATGGGGAATGTTCTCAGAATGCTAATCTCCTTCTTTATCGCTCATCTGCTTGCTTCCTAAACTCTTTCTAGGGTCGGTATAGAGAGAGAAGCTACCCTTCCTAAGTAGGGAAGAGAGAAGAGGTTCGGGTGGGTCGGCTCTATGACCAGCTCTTTCGGTTGAGGAGATAGGAAAGACCCCCACGTAGCGGGAGAGGATGCAGGCAGGAAAAGTCGCTTTTGACTTCGATCAGTAGGTAGGCTTTCCTTGTTCATTGATCTGATAACTGTTCTCATTAGCAAATTCTGAACTCTTATCTTCAAGAAAGAAATCCCTAGGCTTTTTTCTTAGAGGTCCTTAGATATCAGTTCCATTAACAAGTCCTTCGGACGGGCAAAGAAGCTTCAAACTGTTCTCAGCGAAAGGTCCCACCCGGGCCAGGCAGCTCGAACCAAGACAGATCGGATCGGGGAAGCTAGGGTGAAAGAGTCTCCCTCCGAGGCTCTTGCTAGGGGAAAGCCAAGACCAGAGGCTAAAGAAATTTCCTACTCTTTGAACCGGTACGTGGTAGTTTAATTGCTCTTCTTGCTTAGTTTAGTTATGCCTTATTCATTCCTTATTCATGCATTGGCGCGAGGCTGATTTCTCTTCATCCTGTTCCCGTAAGACCCGAAAGATGATGATTCGGAGTTAGAGTAAGAAGAAAAAGGAGAATAGGCTCGATGCTGGGTAGGTTTAGGATGCGACCGAGTACCCTTATTCGTTATGCTCCTTGACCGAAGTTTCTCTCTTTCCTGATTTTCTAGAAAAATGAATAGGTTTCCGAATAGGAAGAAGTACGTACTTGAAGTTCTAATAAGCCTCATCTCTTCTAAGGGAACTAAATAATAGGTTTAGGGGCTGCTATCCCTAGGTCGGGGAATCGGGCAAGGTCACATCTTCAGACTGAGTCTGCTCTCTCCCTTTCATCAGAGTCTGGTTGGGATCAGGTCGGAGCTCTATTCTCAGTCTCGGAATCGGTTAGGGTCGGACAAGCATTCCCGAGTCGAGTACGGAACTGAAATAGGTCGGAGGTCGGTTAAGTGCTCTTTCTTAGTATTCTCTCTTTCATAGGATTTGGAAGCCAGACCAGACCGACCGGCTAGGTTCTTTCGTCGGATTAGGAGTCTTCCTTCCCGGGGACATGGGTCTTCCCACTACGCCTTTTCTCTCTTTCATCAGTCTTCTCAGAAGCTAGACCGACCGGCCGAGTTGGAGCAGCCGAGACCGAGTCTGAGGAAGAGTCCTACCTTCCATTATCATAAAGAGGAATGAGAAAGAATTCTCTCTTTCCGTCAGTCTGTCTCCATGGGACTCTGATAGGGTAGGGAATGAGTTCTAATTCTCTAAGTTCAGTTAGCTTTCTTACTCAGAAGGTAGAATACGACCGTAAAGCCGCTATCCTGGTTCGGGGCTAAGCTGTGCTTTACCGAGAAAGAGCTGCTGAGTTGGAGTTTGACAGGTAACTGAAATCGGACGAAAGGGAAGAGAAGGCTCCGTAAGGCGCGAAGCGAAACGACTGTGAAGGAGTGCATTATGTTTATATGGATTTCTTTCGTTGCACTCCTGAATTCTAATATAAAGAAGGAGCGAAGTCAAAAGTAGTTTCAGATATAGGAGAGGAGCGAAGGTACTCGTAGTTTCAAATATAGGAGAGGAGCCCGACGATTATTATGTATTATGAAATTCTTTATATGGATTTCTTTCGTTGCACTCCTTCAATAATTCAGTCGTTTCGCCTCAAATTCTTTGACCCTCTCCTCTCCTTATCAGTCGAGTTTCTTCGAACCTTATTATTTGGAGAGCTATTTCATAATGCACTCCTTCTTTAAATCAGTCGTTTCGCTTCTCCCCTCTCCTTATTATTTTGAGAGCTATTGAATAATACCACTCCTTCAATAATACAGTCGTTTCGCTTCTCCCCTCTCCTTACAGTCGAGCTATTTCATAACCTCCGGACGACTCCAGAATCAAGTCAAAGACTGATCTCAGTCTTAATTAAAGACTTCCTTATTTAGAAGGAGCCCGACGATGGACCTTTGCCCCTCTCCTATATCTGAAACTACGAGCACCTAGCTAGGAGCAAAGAATTTGCGAAAAACCACTCAAAAAAGTCCGAAGGAGGGACGTAGGACCAGACCACTCAAACCCGCTCCGTAGTGGGCATTGACTGCCGATGCGTATGATTGGTAGAGCTTTCCTTGATCCTCTTGGTGGGGAGTCCCTAGCCTCTGTCCTTGTCCCATAACTAATACTGATTGATGAATCCCTTATTTCATCCTACTCCTCGTTCATTCATTCTACGAGAGAAAAGAAATAGCAAAGCGGATGAAGCATGAAACCACTGAATCAAGAGCAAGCCCTTGAAACCCCAACTTCCACAACTGGCCTAAACCAGAGGGAGAACTGCCTTGTGAGGGTAGAGGAGAGGATTGAATTTCAGTATTGGGTAAAAGAGCTGAGCTCCGAAAGAAGGTCAGAGAGCTCGCCCCGATTGTCTTGTGAGATGGGTTCTTTTGACATCAAATAAAGAAAGCAAATGACATCAAATAAAGAAAGCAAAAACGGTAAGTAGGTTTTAGTAGGTTCGTCTTCTCTGGCTTCTTGCTGTTAGTAGAAAGCGATGGTGAACAAGCTGAAAGAGGGACTTTCCATTCACTTCTGAACTTGAGAAAAGTCTTTATTCACTGACTTTCTTTATTCACTTCAATGAACAAGGTCTCGACTGAAAGGAGAGAAACCCATTATCTGAATATGGGATTCTTTCTGGAGCGGGAATCTTTCTTCAATTCTTTGTTCTCATCATCCCATTTTGACCGGCGTAGAAGGAGACCTCTCATGGCTGATTATTCGACGAAGTCGGATTCCTTTCTTATTGCAGACTTTTGAGTCCTCCGTCTGACCTTTCTTCCACAGGTTGAATCACCTTCACTGAAAATGAGATATCTGGAATCATGTGAAAGGTAGATAAAGAGAAGTTAGCATTTGAAGATGAAATTCGGAAAGATCAATCATCCTCACCTTCTCCTCTTAGCACTCCTTTACAGTCCAAATTGACTATCATTTTTTTCTTCTTTCTCTCGCACTCCTATTCTTTGAGTTCCATTCTGAGTTGCACTCCTTCAAATTTCAAGGATAAGGACCCACAAATTCTTTGCGCCTCGCCTTTCAGTCGAGCCTCTCCTATATCTGAAACTACGAGTACCTTCGCACCTTTCAGTCGCAAATTCTTTGCTCCTACTCCGCCTTGCGCTCCATCTTTGACTTAGTGGATCAAAGAGGCTCAAAGGATTTGAGTCGCTTCGATCATTCCACTAAAAGACTAGTCACCTGGACCTTTGAAATTCAAGCAGTGAGGACTAGCTTAATTAGTTTCCATATTCACAAATCTACCATATTCACGAACCTTGTCTTCTTCTTTCACCTTCCTCTTCTGAAACCTCTTTAGATAAAAAAGATCTTTTTCTTCCGTCTGCTCTTATTTCATCTGAAACTCTAAGATCAAGCCCTTGTTCATTGAGTTGTCTTTCTTCTTTGTATCTTCCTTTCTAGTTTTTTCTAGGCTTTCTTTTCTTCCTTTTATCTTCCTTTAAGCCCAAAAAGTAGGTTCATATGGACGACTTGACTCTCGTATAGGTCGGATGTTTCCGTGAACAGTAAGCAGCGGATCTCCCCTGATTTTGGGAAAGCTGGTGGCCGCGTGTGAATTCTTTCAAGGCAAGGGGCCTGATCGACATTCTTGTTTACTCTGATCCGGTCGAGGTGGTTTTCCTTTACCAGCGCGTAGGTGGTCTCAGTTCCTATGACCGAGTCTTTCTGGCCCCTGTGAACATCTTTTTTTCATGTATTAAAGAGGGCCTCTCTAACCGGTGAAAAGTGGTGGGTGTCCACTAACGGCCATTCCTGGCTCGGCTCCGATAATGCAATTCCGGGAGGAGTCGGTAGTTGGGCACTGGATCCCTTCGGACCTGGAGAACGTGGGACGCTGGGTCGGGGTTTGGTGAACCGGTCGCTCTTCTCCTTGACAGTTGAGTTGCTTTGCTCCTGTAAAGAGAGAATGAAAGATCGAATTCAGAGATCATGAAAGATCAAGTCTTTTTTTCTCTTTCTCTTTCTTTCTCTACAACTCTCATCTCAAAAGGGTCGAGTTCCTTCGCTCTGCGACTCGTCTTTCAGTATCGGGCCCCTTTTTCGTTGCCTAGGTTACACCTTCGGAATACCCCATCAGGGAATTTCGCTCTACTTCCCTCAATCTTCACTTTACGCCACGCCGACTCCCCTTTCGTCATAAGGCGTGGAATTAGACCAAGGGGAATCTCCATAGGAACTAGTCCGATTTCGCACGTAGGAGATCGAGACACCAGGGCTATGGACAAAGATGTAGATCGATCGCCCTATCTCGACAACTACATAGAGGGTCTGACCTTGTATATATATACTTGGATTTCCCTACTTTCATCCTATATATTAGCCGACCTTCCGTTTGAGTTCCATGAATGAGTCCGACCGCTAAGTGGGAATATGGCCGGATTCAAGGACGGACCCATTTGATCCACTAAGGAAAAGATGGAACTCAAACTTCCGCCTCAATGGATCTGGATAGCTTTCTTTGCTTTCCTTTTGGACGGAGGCATCTCAAATTCTTTGAGCCTTGATTGAACCTTCTTTCTTGCTCTGGGAGTCCTACAGATAGGCTTGGAATTTCTTCCATTTTACTAAATCATTTCTTTCTCAGAAAGGAGATTTTGAGATATCGGTAGTTGTCCGGTCGTACCCAAACAGTAAGATTCCAGAGGAAAATGCACCTAAGATCAAATATTTCGAGCCGGCTTCCGTGGAAAATTCTGACTTTCTTTTTGATGCTGCCATCACATAAAAACATAAACTTTGAGGCTCAATAGCTAAATACATGGAAATTGAATCATGAGCCGAGATCATAAAGAGCATACTGCGAGTAGGAAGTGGAATTAATACAATGAATTCAAAAGCATCAAACCTCTCTTTAAAGAAAGAATCGAAACACATCGAAATGGTACCAGCCGTACTTAATAATAGAAGTATTTGGCAGAAATATGTCAAATTGTCCCTCCTCAAAAAATGATTCCAGAATAAATGGGCAATAGTTAGGAGAGGTGCGCCAGCGGCGAGCAGAAGCAAGGTTATTAGATACCGCCTCAATGAACAAGGCTCCGTAAGGAGTTGACGGCCAGAACCACACGTGCAAGTTTCCCTGCATGTGGCTCGTCCGTGATAACTTCTTCGGATTTGCGTGAACTAGCGGACCGATCTGGGGATGCTCCCTCCAGCATGAGCGAACCTTTTCGGAACTGGTTAGGAATGGGGGCCACGAGACCAGCCCGAATCCAGCCAGGTTCTATTTCTCATGTCCCCTTCCCAACAATTCTACCTTGTCTTGGGGCCTCTTTGGCTTGTAGAGAGAAAGCCCGCCTCCGCTCCGAAAAAAGTCTGTCTCTTCCCTTTGTTCAAAGAGGAGGTGCGTCCACAGAAGAGGAAAGAGCAATGCATCTTGCTCAGCAGGCGTAGCTTGGAGTGGGAGTGCTAATTAAACTACCACGGACCTAGGCTTGAACTTTCTGGGAGTCTGAATGGAAGGCAAACCGGCCTATTAAGCGCAGCTAAGCGACTAATTAAGCTAGCACGGACCGGAGAAAGCCAGGTGCCGGAGGTCAGCTCTATTCGGCCCGGAGCATTGATTCCCCATAACGAAGAGGCTAGCTCGAGATCTCAATTGCCTATCCTGTGCTCGAGAAGGTCCCCCAGTTCCTCGGCAGCACCTCGAGGTTCATTTTGATGTCTTAGATGAGACTCGGGATATTCCTCACTCCATGGCATGGCACCTTTCGCTCATCCATTCCGCCCGTCCAGACGCTGAGCCCTTTTTTCATTATCATCTACCGCCCTTTCTTTCCTCCCGGCTATTCACGCATGAAGATCGTCGTATGTATGCTCGACTTCGGTTGCCGGTGCTATAGGTAGGAGTACATTATGGCAGGATCAGTCACCCGGGCAAACCAACCCTCCTCCGATCAGAATTGTGCTATGCCCCCCCGATCCCTATAGAGCGAAAGAGCTGCCTGGTGATCCCTAGGTTGCAGCACGTCCGGTCGTGAACTCCTCCGCTGCCGCCGTTTCTAGGACCGACCGACGCCTCACCTGCACAGGTACCTACGTAGTGTAGTGTCGGTCGCACATTCAACATAGCGTTCGGACTCATGTGCCTTCCAGAACCAGGGGTCTTCGAGCCTGCTGCGTACGATTAGCCAGCCTTGCGGCGGCAAAAGGATTAGACGTCCCCCCATGCTACGGTTCCCTGCGGCCCGAACCCGGTCCCGCATTAGGTTAGGGAGTTGGGCGATAATAGCTCCTCCGCATCCCAAAGCGCGCTGCCCTCCTAGGCGCGCAACACTAAGTAATCCAAGCCAACCCACATTACTGACTAACGGTGGATAAGAATCTTTCTTAGAGGTACTAAATACAACTCCATGAATGAGCAAAATGAAAGTAGCATTAATTAGAAAGATCTCTGGGGAAACCGCTAAAAAAAGATTGAACATGTGGGATGGATGTGGGAGGATCCGAACGAATTCTGCTTTCATTTCCCCCGTATAGAGCACTGAGTTACTTACGTTACGGTCTTCAACAGGCAGGCTGCACTGACGACCAAGCAACAAAACTAGAACAAAAAAGAATACAATAAACTAACGAGTCTGATTTTTGATTGTAGTTTTGATTGTTGTTTGAGTGGATTGGGGCGGAGAGGGCGGCTAGGAGAGGAGGGATCGCTAGACCAGCAGCCAGACCAAGAATGAATGTGTAATGATTGTGATTCCACACCAAGAAAAAGAAAGAATTGAATGTCGAAAGGGGATCCTAAACGAAAAAGGAGTCCATGACCCCGCGTATAAGGAGAGGTCGAATTCCAAACAAAGCTTTCCCCTGAACCTCTACAACTCGGTAAAGCTGCTTCTAACCTTGAAACTAATAAGGAAACCCCTATACATGAATTTCAGGCGGATGAAAGGATAGGCTTGATTTAGTAGGTTTAGAAGTTGAAGTTCTCAAACTAGAGAAAGTTGGAAAGTTTCAGTTCCATAAAGGGAAAGCCTATCCAACAACTCAATTCCATAAATCAGTCCAAGGAAAGAGAAGTCCTAGTTCAGTTTGAGTTCCATCTTTTAGTGGTCCGAAGTGGAATATGGATTTCTGTTTTTTAGCCTTTATTCATTGATTCAGAATAAACAAGGGTCCGTCCGAAGGTTCAGGGAAGAACTCGACTCCCACGGGGCGGTTCTTTGAAAGTCGACTGATAAGGAGTCAATGAACAAGGAATTTCATAAAGAAAGCGAAAGGACTGAATTATCATATTTTCAGGAGCCCTTTATTTGAAGAAATAGCTCTCCAAATAATAAGGTTCGAAGAAAGTCGACTGATAAGGAGAGGAGAGGGTCAAAGATGAATAAAGAAAGCGAAGTCCTTATCCCTTATTTTGAGCCCTTAGATTAGAAATAACTCGACTCAAAAAGATAGGGTGCGAAGGTACTCGTAGTTTGAAATAGA

Coding sequence (CDS)

ATGAAAGATCAAGTCTTTTTTTCTCTTTCTCTTTCTTTCTCTACAACTCTCATCTCAAAAGGGTCGAGTTCCTTCGCTCTGCGACTCGTCTTTCAGTATCGGGCCCCTTTTTCGTTGCCTAGGTTACACCTTCGGAATACCCCATCAGGGAATTTCGCTCTACTTCCCTCAATCTTCACTTTACGCCACGCCGACTCCCCTTTCGTCATAAGGCGTGGAATTAGACCAAGGGGAATCTCCATAGGAACTAGTCCGATTTCGCACGTAGGAGATCGAGACACCAGGGCTATGGACAAAGATGTAGATCGATCGCCCTATCTCGACAACTACATAGAGGGTCTGACCTTGTATATATATACTTGGATTTCCCTACTTTCATCCTATATATTAGCCGACCTTCCGTTTGAGTTCCATGAATGA

Protein sequence

MKDQVFFSLSLSFSTTLISKGSSSFALRLVFQYRAPFSLPRLHLRNTPSGNFALLPSIFTLRHADSPFVIRRGIRPRGISIGTSPISHVGDRDTRAMDKDVDRSPYLDNYIEGLTLYIYTWISLLSSYILADLPFEFHE
Homology
[Close]
BLAST of Cmc00g0001701.1 vs. NCBI nr
Match: TYK27104.1 (hypothetical protein E5676_scaffold77438G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 1.6e-54
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MKDQVFFSLSLSFSTTLISKGSSSFALRLVFQYRAPFSLPRLHLRNTPSGNFALLPSIFT 60
           MKDQVFFSLSLSFSTTLISKGSSSFALRLVFQYRAPFSLPRLHLRNTPSGNFALLPSIFT
Sbjct: 1   MKDQVFFSLSLSFSTTLISKGSSSFALRLVFQYRAPFSLPRLHLRNTPSGNFALLPSIFT 60

Query: 61  LRHADSPFVIRRGIRPRGISIGTSPISHVGDRDTRAMDKDVDRSPYLDNYIE 113
           LRHADSPFVIRRGIRPRGISIGTSPISHVGDRDTRAMDKDVDRSPYLDNYIE
Sbjct: 61  LRHADSPFVIRRGIRPRGISIGTSPISHVGDRDTRAMDKDVDRSPYLDNYIE 112

[Close]
BLAST of Cmc00g0001701.1 vs. NCBI nr
Match: KAF3452206.1 (hypothetical protein FNV43_RR08304 [Rhamnella rubrinervis])

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-19
Identity = 55/68 (80.88%), Postives = 55/68 (80.88%), Query Frame = 0 

Query: 41  RLHLRNTPSGNFALLPSIFTLRHADSPFVIRRGIRPRGISIGTSPISHVGDR---DTRAM 100
           RLHLRNTP GNFALLPSIFTLRHADSPFVIRRGIRPRGISIGTSP      R     RAM
Sbjct: 105 RLHLRNTPEGNFALLPSIFTLRHADSPFVIRRGIRPRGISIGTSPSDFARRRSRHSPRAM 164

Query: 101 DKDVDRSP 106
            KDVDRSP
Sbjct: 165 GKDVDRSP 172

[Close]
BLAST of Cmc00g0001701.1 vs. NCBI nr
Match: GEX63639.1 (NADH dehydrogenase subunit 6, mitochondrial [Tanacetum cinerariifolium])

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-18
Identity = 52/67 (77.61%), Postives = 54/67 (80.60%), Query Frame = 0 

Query: 42  LHLRNTPSGNFALLPSIFTLRHADSPFVIRRGIRPRGISIGTSPISHVGDR---DTRAMD 101
           LHLRNTP GNF+LLP IFTLRHADSPFVIRRGIRPRGISIGTSP+     R     RAM 
Sbjct: 605 LHLRNTPEGNFSLLPPIFTLRHADSPFVIRRGIRPRGISIGTSPLDFAHGRSRHSPRAMG 664

Query: 102 KDVDRSP 106
           KDVDRSP
Sbjct: 665 KDVDRSP 671

[Close]
BLAST of Cmc00g0001701.1 vs. NCBI nr
Match: GEU45486.1 (reverse transcriptase domain-containing protein [Tanacetum cinerariifolium])

HSP 1 Score: 75.5 bits (184), Expect = 4.1e-10
Identity = 38/60 (63.33%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 49  SGNFALLPSIFTLRHADSPFVIRRGIRPRGISIGTSPISH---VGDRDTRAMDKDVDRSP 106
           S  F + P  FTLRH DSPFVIRRGIRPRGISIGTSP+     +     +AM KDVDRSP
Sbjct: 710 SDPFFVAPPFFTLRHVDSPFVIRRGIRPRGISIGTSPLDFTRGISRHSPKAMGKDVDRSP 769

[Close]
BLAST of Cmc00g0001701.1 vs. NCBI nr
Match: GFA94645.1 (hypothetical protein [Tanacetum cinerariifolium])

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-05
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0 

Query: 51  NFALLPSIFTLRHADSPFVIRRGIRPRGI 80
           NF+LLP IFTLRHADSPFVIRRGIRPRGI
Sbjct: 275 NFSLLPPIFTLRHADSPFVIRRGIRPRGI 303

[Close]
BLAST of Cmc00g0001701.1 vs. ExPASy TrEMBL
Match: A0A5D3DUC5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold77438G00020 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 7.7e-55
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MKDQVFFSLSLSFSTTLISKGSSSFALRLVFQYRAPFSLPRLHLRNTPSGNFALLPSIFT 60
           MKDQVFFSLSLSFSTTLISKGSSSFALRLVFQYRAPFSLPRLHLRNTPSGNFALLPSIFT
Sbjct: 1   MKDQVFFSLSLSFSTTLISKGSSSFALRLVFQYRAPFSLPRLHLRNTPSGNFALLPSIFT 60

Query: 61  LRHADSPFVIRRGIRPRGISIGTSPISHVGDRDTRAMDKDVDRSPYLDNYIE 113
           LRHADSPFVIRRGIRPRGISIGTSPISHVGDRDTRAMDKDVDRSPYLDNYIE
Sbjct: 61  LRHADSPFVIRRGIRPRGISIGTSPISHVGDRDTRAMDKDVDRSPYLDNYIE 112

[Close]
BLAST of Cmc00g0001701.1 vs. ExPASy TrEMBL
Match: A0A6L2K7V0 (Reverse transcriptase domain-containing protein OS=Tanacetum cinerariifolium OX=118510 GN=Tci_017464 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.0e-10
Identity = 38/60 (63.33%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 49  SGNFALLPSIFTLRHADSPFVIRRGIRPRGISIGTSPISH---VGDRDTRAMDKDVDRSP 106
           S  F + P  FTLRH DSPFVIRRGIRPRGISIGTSP+     +     +AM KDVDRSP
Sbjct: 710 SDPFFVAPPFFTLRHVDSPFVIRRGIRPRGISIGTSPLDFTRGISRHSPKAMGKDVDRSP 769

The following BLAST results are available for this feature:
BLAST of Cmc00g0001701.1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK27104.11.6e-54100.00hypothetical protein E5676_scaffold77438G00020 [Cucumis melo var. makuwa][more]
KAF3452206.11.7e-1980.88hypothetical protein FNV43_RR08304 [Rhamnella rubrinervis][more]
GEX63639.11.4e-1877.61NADH dehydrogenase subunit 6, mitochondrial [Tanacetum cinerariifolium][more]
GEU45486.14.1e-1063.33reverse transcriptase domain-containing protein [Tanacetum cinerariifolium][more]
GFA94645.13.0e-0593.10hypothetical protein [Tanacetum cinerariifolium][more]
BLAST of Cmc00g0001701.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc00g0001701.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DUC57.7e-55100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6L2K7V02.0e-1063.33Reverse transcriptase domain-containing protein OS=Tanacetum cinerariifolium OX=... [more]
BLAST of Cmc00g0001701.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc00g0001701Cmc00g0001701gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc00g0001701.1-exonCmc00g0001701.1-exon-CMiso1.1chr00:2111744..2121725exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc00g0001701.1-three_prime_utrCmc00g0001701.1-three_prime_utr-CMiso1.1chr00:2111744..2114821three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc00g0001701.1-cdsCmc00g0001701.1-cds-CMiso1.1chr00:2114822..2115241CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc00g0001701.1-five_prime_utrCmc00g0001701.1-five_prime_utr-CMiso1.1chr00:2115242..2121725five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc00g0001701.1Cmc00g0001701.1-proteinpolypeptide