Cmc00g0000171 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc00g0000171
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cytochrome c biogenesis B
Location	CMiso1.1chr00: 133284 .. 133909 (+)
RNA-Seq Expression	Cmc00g0000171
Synteny	Cmc00g0000171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACGACTCTTTCTTTCACTATATCATAAACGGATCTTCCCCTCCACACCAATCACGAGTTTTTCTCCATTCCTCTCGTATATCGTCGTCACGCCCTTAATGCTAGGTTTTGAAAAAGACTTTTCATGTCATTCCCATTTAGGTCCGATTCGGATCCCTCCGTTGTTTCCTTTTCCTCCCGCACCTTTTCCTCGAAATGAGAAAGAAGATGGTACACTCGAATTGTATTATTTAAGTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACCGGGTTATTCAAATAAGTTGTCTTTTCTGTGGTTTTCCCATGTTCAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCCTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCAATTTCGGTCTCTCTGAGTTTACAAGATTGAATGGC

mRNA sequence

ATGAGACGACTCTTTCTTTCACTATATCATAAACGGATCTTCCCCTCCACACCAATCACGAGTTTTTCTCCATTCCTCTCGTATATCGTCGTCACGCCCTTAATGCTAGGTTTTGAAAAAGACTTTTCATGTCATTCCCATTTAGGTCCGATTCGGATCCCTCCGTTGTTTCCTTTTCCTCCCGCACCTTTTCCTCGAAATGAGAAAGAAGATGGTACACTCGAATTGTATTATTTAAGTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACCGGGTTATTCAAATAAGTTGTCTTTTCTGTGGTTTTCCCATGTTCAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCCTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCAATTTCGGTCTCTCTGAGTTTACAAGATTGAATGGC

Coding sequence (CDS)

ATGAGACGACTCTTTCTTTCACTATATCATAAACGGATCTTCCCCTCCACACCAATCACGAGTTTTTCTCCATTCCTCTCGTATATCGTCGTCACGCCCTTAATGCTAGGTTTTGAAAAAGACTTTTCATGTCATTCCCATTTAGGTCCGATTCGGATCCCTCCGTTGTTTCCTTTTCCTCCCGCACCTTTTCCTCGAAATGAGAAAGAAGATGGTACACTCGAATTGTATTATTTAAGTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACCGGGTTATTCAAATAAGTTGTCTTTTCTGTGGTTTTCCCATGTTCAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCCTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCAATTTCGGTCTCTCTGAGTTTACAAGATTGA

Protein sequence

MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFPPAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWFHVPSSIGYSSPFVSLFPISVSLSLQD

Homology

[Close]

BLAST of Cmc00g0000171 vs. NCBI nr
Match: AEN56106.1 (cytochrome c biogenesis B [Cucumis melo subsp. melo] >AZP40281.1 cytochrome c biogenesis B [Cucumis melo var. momordica])

HSP 1 Score: 418.7 bits (1075), Expect = 2.9e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60
           MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180

Query: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 207
           HVPSSIGYSSPFVSLFPISVSLSLQD
Sbjct: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 206

[Close]

BLAST of Cmc00g0000171 vs. NCBI nr
Match: YP_009913630.1 (cytochrome c biogenesis B [Luffa acutangula] >QLJ93004.1 cytochrome c biogenesis B [Luffa acutangula])

HSP 1 Score: 413.3 bits (1061), Expect = 1.2e-111
Identity = 202/206 (98.06%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60
           MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISC+FCGFPM KLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPT+SRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 180

Query: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 207
           HVPSSIGYSSPFVSLFPISVS+SLQD
Sbjct: 181 HVPSSIGYSSPFVSLFPISVSISLQD 206

[Close]

BLAST of Cmc00g0000171 vs. NCBI nr
Match: YP_004849329.1 (cytochrome c biogenesis B [Cucumis sativus] >ADZ10756.1 cytochrome c biogenesis B [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 7.9e-111
Identity = 202/206 (98.06%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60
           MRRLFL LYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLELYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQL+GH VIQISCLFCGFPM KLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLLGHWVIQISCLFCGFPMLKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180

Query: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 207
           HVPSSIGYSSPFVSLFPISVSLSLQD
Sbjct: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 206

[Close]

BLAST of Cmc00g0000171 vs. NCBI nr
Match: QXE45588.1 (cytochrome c biogenesis B [Prosopis glandulosa])

HSP 1 Score: 398.7 bits (1023), Expect = 3.1e-107
Identity = 195/206 (94.66%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60
           MRRLFL LYHK+IFPSTPITSFSPFLSYIVVTPL+LGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLELYHKQIFPSTPITSFSPFLSYIVVTPLILGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISC+FCGFPM +LPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLQLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180
           MDRLNILLGSLVLTLLCGIHSR ALGITSS GWNSSQNPTTSPTSLPPT+SRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRLALGITSSSGWNSSQNPTTSPTSLPPTVSRTSIETEWF 180

Query: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 207
           HV SSIGYSSPFVSLFPISVS+SLQD
Sbjct: 181 HVLSSIGYSSPFVSLFPISVSISLQD 206

[Close]

BLAST of Cmc00g0000171 vs. NCBI nr
Match: YP_009498132.1 (cytochrome c biogenesis B [Senna tora] >YP_009504845.1 CcmB [Senna occidentalis] >YP_009559989.1 cytochrome c biogenesis B [Acacia ligulata] >YP_009704700.1 cytochrome c biogenesis B [Libidibia coriaria] >YP_009704741.1 cytochrome c biogenesis B [Haematoxylum brasiletto] >QEX95854.1 cytochrome c biogenesis B [Cercis canadensis] >QHE65824.1 cytochrome c biogenesis B [Castanospermum australe] >QXE45550.1 cytochrome c biogenesis B [Ceratonia siliqua] >AWW13934.1 cytochrome c biogenesis B [Senna tora] >AWW13966.1 CcmB [Senna occidentalis])

HSP 1 Score: 396.0 bits (1016), Expect = 2.0e-106
Identity = 194/206 (94.17%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60
           MRRLFL LYHK+IFPSTPITSFSPFLSYIVVTPL+LGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLELYHKQIFPSTPITSFSPFLSYIVVTPLILGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISC+FCGFPM +LPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLQLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180
           MDRLNI LGSLVLTLLCGIHSR ALGITSS GWNSSQNPTTSPTSLPPT+SRTSIETEWF
Sbjct: 121 MDRLNIPLGSLVLTLLCGIHSRLALGITSSSGWNSSQNPTTSPTSLPPTVSRTSIETEWF 180

Query: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 207
           HV SSIGYSSPFVSLFPISVS+SLQD
Sbjct: 181 HVLSSIGYSSPFVSLFPISVSISLQD 206

[Close]

BLAST of Cmc00g0000171 vs. ExPASy Swiss-Prot
Match: P93280 (Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMB PE=2 SV=2)

HSP 1 Score: 303.9 bits (777), Expect = 1.4e-81
Identity = 164/206 (79.61%), Postives = 169/206 (82.04%), Query Frame = 0


Query: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60
           MRRLF  LY+K IF STPITSFS FL YIVVTPLMLGFEKDF CH HLG I I  LF F 
Sbjct: 1   MRRLFFELYYKLIFSSTPITSFSLFLLYIVVTPLMLGFEKDFLCHFHLGLIWISLLFSFL 60

Query: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120
            A F RNEKEDGTLELYYLS YCLPKILLLQLVGH VIQISC+FCGFPM +L YQFGRSG
Sbjct: 61  SALFFRNEKEDGTLELYYLSTYCLPKILLLQLVGHWVIQISCVFCGFPMLQLLYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180
           MD LNILLGSLVLTLLCGIHS  ALGITSS GWNSSQN TT PT LP T+  TSIETEWF
Sbjct: 121 MDWLNILLGSLVLTLLCGIHSCLALGITSSSGWNSSQNLTTLPTLLPLTVFCTSIETEWF 180

Query: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 207
           HV   IGY   FVSLFPISVS+SLQD
Sbjct: 181 HVLLLIGYFFLFVSLFPISVSISLQD 206

[Close]

BLAST of Cmc00g0000171 vs. ExPASy Swiss-Prot
Match: P38454 (Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Marchantia polymorpha OX=3197 GN=CCMB PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 6.4e-55
Identity = 120/205 (58.54%), Postives = 147/205 (71.71%), Query Frame = 0


Query: 3   RLFLSLYHKRIF--PSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 62
           ++FL L+++ I    ST IT+FS FL YIVVTPLM+GF KDF CH HLG I I  LF F 
Sbjct: 69  KIFLKLFYQHILLNLSTLITTFSLFLLYIVVTPLMIGFSKDFLCHFHLGLIWICLLFSFL 128

Query: 63  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 122
           P  F +N+ EDGTLELYYLS YCL KILL +L GH V+QIS +FC FP+ +L YQF +S 
Sbjct: 129 PERFFQNDFEDGTLELYYLSGYCLQKILLSKLYGHWVLQISGVFCSFPVLQLLYQFDQSK 188

Query: 123 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 182
           M+   I++GS + TL+CGIHS  ALGITS+ GWNS QN TT PT LP  +  TSIETEWF
Sbjct: 189 MNWFTIIIGSQIFTLMCGIHSCLALGITSN-GWNSLQNLTTLPTLLPLIVFCTSIETEWF 248

Query: 183 HVPSSIGYSSPFVSLFPISVSLSLQ 206
           HV   +GY   F+  +PI VS++LQ
Sbjct: 249 HVILLMGYLLLFLFFYPILVSITLQ 272

[Close]

BLAST of Cmc00g0000171 vs. ExPASy TrEMBL
Match: G3EU22 (Cytochrome c biogenesis B OS=Cucumis melo subsp. melo OX=412675 GN=ccmB PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60
           MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180

Query: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 207
           HVPSSIGYSSPFVSLFPISVSLSLQD
Sbjct: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 206

[Close]

BLAST of Cmc00g0000171 vs. ExPASy TrEMBL
Match: A0A3Q9CS08 (Cytochrome c biogenesis B OS=Cucumis melo var. momordica OX=2034244 GN=ccmB PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60
           MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180

Query: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 207
           HVPSSIGYSSPFVSLFPISVSLSLQD
Sbjct: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 206

[Close]

BLAST of Cmc00g0000171 vs. ExPASy TrEMBL
Match: A0A7D6C7C3 (Cytochrome c biogenesis B OS=Luffa acutangula OX=56866 GN=ccmB PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 5.9e-112
Identity = 202/206 (98.06%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60
           MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISC+FCGFPM KLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPT+SRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWF 180

Query: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 207
           HVPSSIGYSSPFVSLFPISVS+SLQD
Sbjct: 181 HVPSSIGYSSPFVSLFPISVSISLQD 206

[Close]

BLAST of Cmc00g0000171 vs. ExPASy TrEMBL
Match: G3EIY1 (Cytochrome c biogenesis B OS=Cucumis sativus OX=3659 GN=ccmB PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 3.8e-111
Identity = 202/206 (98.06%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60
           MRRLFL LYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLELYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQL+GH VIQISCLFCGFPM KLPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLLGHWVIQISCLFCGFPMLKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180
           MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180

Query: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 207
           HVPSSIGYSSPFVSLFPISVSLSLQD
Sbjct: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 206

[Close]

BLAST of Cmc00g0000171 vs. ExPASy TrEMBL
Match: A0A3S5HWV9 (Cytochrome c biogenesis B OS=Acacia ligulata OX=138025 GN=ccmB PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.8e-107
Identity = 194/206 (94.17%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60
           MRRLFL LYHK+IFPSTPITSFSPFLSYIVVTPL+LGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLELYHKQIFPSTPITSFSPFLSYIVVTPLILGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120
           PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISC+FCGFPM +LPYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLQLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180
           MDRLNI LGSLVLTLLCGIHSR ALGITSS GWNSSQNPTTSPTSLPPT+SRTSIETEWF
Sbjct: 121 MDRLNIPLGSLVLTLLCGIHSRLALGITSSSGWNSSQNPTTSPTSLPPTVSRTSIETEWF 180

Query: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 207
           HV SSIGYSSPFVSLFPISVS+SLQD
Sbjct: 181 HVLSSIGYSSPFVSLFPISVSISLQD 206

[Close]

BLAST of Cmc00g0000171 vs. TAIR 10
Match: ATMG00110.1 (cytochrome C biogenesis 206 )

HSP 1 Score: 373.2 bits (957), Expect = 1.3e-103
Identity = 188/206 (91.26%), Postives = 192/206 (93.20%), Query Frame = 0


Query: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60
           MRRLFL LYHK IF STPITSFS FLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP
Sbjct: 1   MRRLFLELYHKLIFSSTPITSFSSFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120
           PAPFPRNEKEDGTLELYYLS YCLPKILLLQLVGHRVIQIS +FCGFPM +L YQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSTYCLPKILLLQLVGHRVIQISRVFCGFPMLQLSYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTLSRTSIETEWF 180
           MDRLNI LGSLVLTLLCGIHSRSALGITSS GWNSSQNPTTSPT LP T+SRTSIETEWF
Sbjct: 121 MDRLNIPLGSLVLTLLCGIHSRSALGITSSSGWNSSQNPTTSPTLLPLTVSRTSIETEWF 180

Query: 181 HVPSSIGYSSPFVSLFPISVSLSLQD 207
           HV SSIGYSS FVSLFPISVS+SLQD
Sbjct: 181 HVLSSIGYSSLFVSLFPISVSISLQD 206

The following BLAST results are available for this feature:

BLAST of Cmc00g0000171 vs. NCBI nr


Match Name	E-value	Identity	Description
AEN56106.1	2.9e-113	100.00	cytochrome c biogenesis B [Cucumis melo subsp. melo] >AZP40281.1 cytochrome c bi...	[more]
YP_009913630.1	1.2e-111	98.06	cytochrome c biogenesis B [Luffa acutangula] >QLJ93004.1 cytochrome c biogenesis...	[more]
YP_004849329.1	7.9e-111	98.06	cytochrome c biogenesis B [Cucumis sativus] >ADZ10756.1 cytochrome c biogenesis ...	[more]
QXE45588.1	3.1e-107	94.66	cytochrome c biogenesis B [Prosopis glandulosa]	[more]
YP_009498132.1	2.0e-106	94.17	cytochrome c biogenesis B [Senna tora] >YP_009504845.1 CcmB [Senna occidentalis]...	[more]

BLAST of Cmc00g0000171 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93280	1.4e-81	79.61	Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Arabidopsis ...	[more]
P38454	6.4e-55	58.54	Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Marchantia p...	[more]

BLAST of Cmc00g0000171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
G3EU22	1.4e-113	100.00	Cytochrome c biogenesis B OS=Cucumis melo subsp. melo OX=412675 GN=ccmB PE=3 SV=...	[more]
A0A3Q9CS08	1.4e-113	100.00	Cytochrome c biogenesis B OS=Cucumis melo var. momordica OX=2034244 GN=ccmB PE=3...	[more]
A0A7D6C7C3	5.9e-112	98.06	Cytochrome c biogenesis B OS=Luffa acutangula OX=56866 GN=ccmB PE=3 SV=1	[more]
G3EIY1	3.8e-111	98.06	Cytochrome c biogenesis B OS=Cucumis sativus OX=3659 GN=ccmB PE=3 SV=1	[more]
A0A3S5HWV9	9.8e-107	94.17	Cytochrome c biogenesis B OS=Acacia ligulata OX=138025 GN=ccmB PE=3 SV=1	[more]

BLAST of Cmc00g0000171 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00110.1	1.3e-103	91.26	cytochrome C biogenesis 206	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..170
None	No IPR available	PANTHER	PTHR30070:SF2	CYTOCHROME C BIOGENESIS B	coord: 1..206
IPR003544	Cytochrome c-type biogenesis protein CcmB	PANTHER	PTHR30070	HEME EXPORTER PROTEIN B	coord: 1..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc00g0000171.1	Cmc00g0000171.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0015886	heme transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0015232	heme transmembrane transporter activity