MELO3C004826 (gene) Melon (DHL92) v4

Overview


Name	MELO3C004826
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Pentatricopeptide repeat-containing protein
Location	chr12: 9175049 .. 9180764 (+)
RNA-Seq Expression	MELO3C004826
Synteny	MELO3C004826

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGGCCTCTCAATCTCTATTCTCAGGTTGCATCTTTCTCACTCAGCTCAGTAACTCACCTTCACGACTTCATCCTCACGGCGGCCGTCGCTCCACCTCTCCATTGCTCATTATCCCACTCTCAGATTTTCACCTCTCTTGACTCAGACTCACGTTCACGTCCTCCACCAGTGACCGACTACCGCTCCTCCTCTGTCTCACGCTCACCCCTCTGACTCTCACCTCACGGCTCCAAATCGCAGAGAGCCGTCCATTAAAACGGTTTTTGCAGCTTTTTTCTCCCTTCAGTTCCCCTCTTGAATAGAAGATTCTTGTGGGCATTTGTTGCTTTGAAGAATATCTTCAAAATTTGAATCTTATAATCAATTTTATTTATGGTATGGCTTCTTCTGTTGTCTTTCATCATTGTGTTGCCTTGAAGTATGTTCCTCAAAATACAAGTTTGAAAATGTCTATCGGACTTTGTTCCATTTCGTACTTCACATATGTTTTCAGTATTGTTTATAGTCTGCTGCACTGCATTCTTGTTATTTCTGGGGTAGTCGAACAAATCCAAACCATGGTGGATTTGTGTGTCTTTTATTAAGTTAGAGTTGAAGTGTTTGGTGCAGATAGTTATTTTATATGTCATTTTCTTGTGAAATTCATGGTTGTTTCTTCCATAGGACAAATTCGAAGCAAGGCCAAGGAGCTAGAGGAAGAAGCTAGAACGAGACCAAGGGGCTACAATGTATAAAAGAGACGAGAGAGAGAGAAGACCGAAGGGAAACAGAATGTATCATTGATGCTACAAATTGGATAGGTTCATGTAGTTTTGTTGTCACTTGTAAGGTCAAGTTTTGGTAGAAAACTATTTTGATAACCCCGTGGAGTCTTTACTTTGCACCTTCAAAGCTTCGCTCTCAGAATTATGCATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGATTACGATGGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCCAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTGACCCTGCCGTCAACCAATTCTTGAACAACAAAACCTCTGCCCCTTCCCCATCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTTATGATTATACCAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCATCACTCTTCCAAGGGAGAATCCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTGCCACACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAACGGTGTCTTCGCGTGCTTTGCTGTCTAAGAAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGCGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAAGACGTTCTGTTGGGTACAGGAACAACGTCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCACGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTGGAGGCAATGATGAGAGGGTTTATCAAAGGTGGGAGCTTAAATCTTGCTTGGAAGCTTCTTGTAGCTGCGAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACGTATTGGTTCTTACCTTACTGGAAGAGCTAGGACAAAGAGAAGCCTTGAAGTTGAACCAACAAGATAGTACAACTATAATTAAGGTCTGCACAAGGCTTCGTAAATTTGAAATTGCTGAGAAACTTTATTGCTGGTATGTTGAATCTGGACATGAACCGAGTATGGTTATGTATACTGCCTTAGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGCAAACTGTCCTTTTGATCTTCCTGCTTATAATGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATGATGTATATCGGAATATGATCACCATTTATTTAGTTTCAGGGAGGTTAGCCAAGTCTAAGGAAATTTATAAGGAAGCGGAGAATGCTGGATTTATCATGGATAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGATTCACCTGTGGCAAGAGATTTTTTTATCTATCACCGAGTTGCACCATCAGTTTGCATATCATCGAGTAGGTGAGTTGCTTTCAATGTATTGGAATTGCATTTCATCTGCACTAAATAAATTGTTAACGAATATTCTTTGTTTTCCCTAATCTACCACGTTCATATTGATTGCTCGATGGACAGATGCCATGTGCATGTGGTTGTGTATGGCAGTCCGGGTGCTTGTGTGTTTCAATAAAGAAAATTTATTGGTTGTCCTTTCTACTTAACCGTTAAATCATGGCATCTAACCTATGAATTTCAATAGTACATCTTAGAAAGTACTTGGTTTTTTGCTTCTGGATGTGTATACATACATATGATTCACATAATGTCTTATGGACTTCTTTTTTTGTTTGTTTGTTTTTTTCCTTTTGAAAACAAAGCATCAAGCTCAAATGCATTACGCCAGAAAACTCTGATTTGCCCCAATACATTGTGATAGCCAATCCAGCACATCAGTAACCCAACAAGAGGAATCCCGACAAGAAAGAGCAAATTTGGCCAATTTGGGCCTCACTATTGCTCGTTCTGGGCAATTAATTAAAGTGAAAGCATCCTCGTAAATAACCTCATATGCAGTTAAGGAGAAGTCGAAAGAATGTCTCCTGGACTAATAATATACATCATACAAACTCAACGACGATTTTGACATATACTGACCAACAATTCTTATTCTCATCTAGCTTCTATAGATTCTTTGTTCCACTATTCAATGAAGTAACTCAATGCTTTGTCCTTCAAGTGCCTGTTTCTAGATAAGTCTCATAAAAGTGTACCATTCCTGTTGTAGTTATAGTCATTACAGTTGTGCTTCTGGTACCAAAACATCCCTGTTGCTGTTTCTAGTGGTTGAGAAGGTTTGAATTACATATTGCTGTTTCTAGTGGTTATGCTGTATCTGTTTATGACTTTGTGAACATAATCTCAGGCATATGATATTTGCATTTCAAAAAATCTTTTTGGGAGCAGGTCTCTATTCCTGGAAGAATGGGAAACGCAAAACAAGCCCTTGCTGTCATCATTGATAAATTAGGAGATATAGAAGAGGTACTGGCATTATCTTTTGACTGAAGGCAGTTTGGCTTCCAGATAGCACGCAAATTTGCATTTGAGTTCTCTTTTCGCTTTTGAGTTGTGGTTACGAACTAGTTATAAAATCTTGTTGTCATCATGGACAGGCAGTGGAGTTTGTTAGTCTCCAACATGATGATGAGCTCTGGGCAGAACTGATAAAGCTGTCTTCACAAGGCTGAAATGGTATCAATAAGTGCTCTTCTCTTATTGTCTAATTTTCCATACACTGATTTATTTTTAAGGGTTTGTCCTCTATTATTGTCAGCTTGGCATGTTATTGGAGCACACAGTTGGCAATCTATATCCTCTTTGTATTGTCAACATGGTTCCTGATGGTTTAGAGATACCTTGCTTTTCTTCATTTTCTGAAATCTTTAGTTTTCAATTTCTGTGGTGTTTATATCTGTTGTCTTTCTATTGCAAGTGGCATATATCCCTTTAAAAGGAACTGTGTTTCCCTTTCACTTGTATAATTCTATTTATTTAATGTTTTAATGTTGTCCAGCCTAGAATTACGTTAGTGGTGGGTTAGAAATCCAGGTCTATCACAATTCACAGTGCTTCTTCTTAAAACTACTTGAATGAATTCTGTAGTTGCTCCACCTTTCTATATTCTTAATTTTGGAAACGATTTGTATTTCCTGATTTGGTCTTGGTCATGTCTTTTATTGCACAAAATCCTCAGCATATTAAACTACTTCAAAAATTTTAGTCCTTGGGGCTATCGCTTCTCTTCTCTGAGACAACAGGTTGTGCATAGCATATAGCACTTATACTATTTGTTACTGGCAAAAAGTAGTAAAGAAAACCACATGGGAATCGGATCTTGGCGTTTTTTGTCGAATCAGCTAATGATTTCATATCGTTTTTTGATAATGCATGGTTTTGTATTGTTTATTGATAATGTCTCGTGTATTTATTCTTCTGTTGTCATTAATTTCTGCACAATTTACAAGGTTACTATTTATACGGTTAGTGTTTTGTAATGTGCGCCTATACTCAGTCCATGTAATCTCTGTTTGAAATTGTCTTAAGCTGTTTGTAGTTGATTTTTGATGCATTAAAACTGGGTTATCATCTTTCTTGCTACTTCCAGATATTTTTTTCTCAGATTTTTTAATTCTCTGACAGGTTGTGTCACAACGAGTCAGGAAACTAAGCATTTTAACCACCAGTTTTGTTGTCAGATTACAGGTTGCGCCTGCATTTAAACAAATTGAACGTATGTGAAATTAGATTTATCATTCGTATTTGGATGTTCATTGGTCTAATATCCTTCCCTTGTGTCTATTTCAGCCTCCGGGATCGGCTAGTTAAAATCATTACTGATTACAGGACGGAAACCAGTCTTAGACATGGATGCAATGATATTTTAAAGGTATTTTCATGCGAGAAATTTTCTTGCTTCACTAGAACTGAGCCTTGTGCTATCAAGATAGTAATGCGTGATTTCTAACAGCCCGACACTGAGTCTACTCGTTAAGTACTACAAATAGGCCAGACATGGAATTTACTTGAGCAATGAAGAAGATGAAGTACATGGGAAGAGGAATGGAAATAAGGTTTCTCGATCAATTAAAAACCTTCAAATGTTAAAATGATGGAGGTTTAAGTAGAAAACTCGGGGAGGCACTCGAGGCTCATATGATCCATTTTTAATACAAAACATATCCGTCGTCCTGTTCTTTTGCTGCCATGTGTATCACGAGACTTGTCTCATAGAATCAACCTCCAATCTTGATGCTAAGAAAGGGACTGGAGACATAGAGGATGACGAAGACGGTGAGGACAATACAGATGTGGGCCAACTGCTTCTTCCGAGACTTGACAATGCTTTGTGCCATCATGGTTTTCGTTATTTTTCTTCGTCTTTGTTGGGCTTTTTGAATTTGTTTATGAGCATGCTAATATGTACAGGCCATCGTCCCTTTCCTCGCATCGCTATTTGTTACTCTTTTTTTTCCTTTTATCAAAGTCTCTATAATTAGTTGGAAGATTTTGGTTGATGGGTTGTATCCATTTTCTTTTTCATACAAAGCTTTTTAAGTTATGCCCAGGTTTGTAGTCGAGTTTTGTTAGGTTAGCTGATTTATAAATTACAAAAGGTAATCAACATTTGTATATTTCTTTTTTCAACTTCAGTTCTTCTGAGAATTGTAACCTCTTATAATCTCAATAATATATATTCATGAATAATATCTGTGACGAAAAGTGCATCCGA

mRNA sequence

ACGGCCTCTCAATCTCTATTCTCAGGTTGCATCTTTCTCACTCAGCTCAGTAACTCACCTTCACGACTTCATCCTCACGGCGGCCGTCGCTCCACCTCTCCATTGCTCATTATCCCACTCTCAGATTTTCACCTCTCTTGACTCAGACTCACGTTCACGTCCTCCACCAGTGACCGACTACCGCTCCTCCTCTGTCTCACGCTCACCCCTCTGACTCTCACCTCACGGCTCCAAATCGCAGAGAGCCGTCCATTAAAACGGTTTTTGCAGCTTTTTTCTCCCTTCAGTTCCCCTCTTGAATAGAAGATTCTTGTGGGCATTTGTTGCTTTGAAGAATATCTTCAAAATTTGAATCTTATAATCAATTTTATTTATGGACAAATTCGAAGCAAGGCCAAGGAGCTAGAGGAAGAAGCTAGAACGAGACCAAGGGGCTACAATGTATAAAAGAGACGAGAGAGAGAGAAGACCGAAGGGAAACAGAATGTATCATTGATGCTACAAATTGGATAGGTTCATGTAGTTTTGTTGTCACTTGTAAGGTCAAGTTTTGGTAGAAAACTATTTTGATAACCCCGTGGAGTCTTTACTTTGCACCTTCAAAGCTTCGCTCTCAGAATTATGCATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGATTACGATGGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCCAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTGACCCTGCCGTCAACCAATTCTTGAACAACAAAACCTCTGCCCCTTCCCCATCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTTATGATTATACCAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCATCACTCTTCCAAGGGAGAATCCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTGCCACACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAACGGTGTCTTCGCGTGCTTTGCTGTCTAAGAAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGCGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAAGACGTTCTGTTGGGTACAGGAACAACGTCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCACGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTGGAGGCAATGATGAGAGGGTTTATCAAAGGTGGGAGCTTAAATCTTGCTTGGAAGCTTCTTGTAGCTGCGAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACGTATTGGTTCTTACCTTACTGGAAGAGCTAGGACAAAGAGAAGCCTTGAAGTTGAACCAACAAGATAGTACAACTATAATTAAGGTCTGCACAAGGCTTCGTAAATTTGAAATTGCTGAGAAACTTTATTGCTGGTATGTTGAATCTGGACATGAACCGAGTATGGTTATGTATACTGCCTTAGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGCAAACTGTCCTTTTGATCTTCCTGCTTATAATGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATGATGTATATCGGAATATGATCACCATTTATTTAGTTTCAGGGAGGTTAGCCAAGTCTAAGGAAATTTATAAGGAAGCGGAGAATGCTGGATTTATCATGGATAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGATTCACCTGTGGCAAGAGATTTTTTTATCTATCACCGAGTTGCACCATCAGTTTGCATATCATCGAGTAGCATCAAGCTCAAATGCATTACGCCAGAAAACTCTGATTTGCCCCAATACATTGTGATAGCCAATCCAGCACATCAGTAACCCAACAAGAGGAATCCCGACAAGAAAGAGCAAATTTGGCCAATTTGGGCCTCACTATTGCTCGTTCTGGGCAATTAATTAAAGTGAAAGCATCCTCGTAAATAACCTCATATGCAGTTAAGGAGAAGTCGAAAGAATGTCTCCTGGACTAATAATATACATCATACAAACTCAACGACGATTTTGACATATACTGACCAACAATTCTTATTCTCATCTAGCTTCTATAGATTCTTTGTTCCACTATTCAATGAAGTAACTCAATGCTTTGTCCTTCAAGTGCCTGTTTCTAGATAAGTCTCATAAAAGTGTACCATTCCTGTTGTAGTTATAGTCATTACAGTTGTGCTTCTGGTACCAAAACATCCCTGTTGCTGTTTCTAGTGGTTGAGAAGGTCTCTATTCCTGGAAGAATGGGAAACGCAAAACAAGCCCTTGCTGTCATCATTGATAAATTAGGAGATATAGAAGAGGCAGTGGAGTTTGTTAGTCTCCAACATGATGATGAGCTCTGGGCAGAACTGATAAAGCTGTCTTCACAAGGCTGAAATGGTTGTGTCACAACGAGTCAGGAAACTAAGCATTTTAACCACCAGTTTTGTTGTCAGATTACAGCCTCCGGGATCGGCTAGTTAAAATCATTACTGATTACAGGACGGAAACCAGTCTTAGACATGGATGCAATGATATTTTAAAGCCCGACACTGAGTCTACTCGTTAAGTACTACAAATAGGCCAGACATGGAATTTACTTGAGCAATGAAGAAGATGAAGTACATGGGAAGAGGAATGGAAATAAGGTTTCTCGATCAATTAAAAACCTTCAAATGTTAAAATGATGGAGGTTTAAGTAGAAAACTCGGGGAGGCACTCGAGGCTCATATGATCCATTTTTAATACAAAACATATCCGTCGTCCTGTTCTTTTGCTGCCATGTGTATCACGAGACTTGTCTCATAGAATCAACCTCCAATCTTGATGCTAAGAAAGGGACTGGAGACATAGAGGATGACGAAGACGGTGAGGACAATACAGATGTGGGCCAACTGCTTCTTCCGAGACTTGACAATGCTTTGTGCCATCATGGTTTTCGTTATTTTTCTTCGTCTTTGTTGGGCTTTTTGAATTTGTTTATGAGCATGCTAATATGTACAGGCCATCGTCCCTTTCCTCGCATCGCTATTTGTTACTCTTTTTTTTCCTTTTATCAAAGTCTCTATAATTAGTTGGAAGATTTTGGTTGATGGGTTGTATCCATTTTCTTTTTCATACAAAGCTTTTTAAGTTATGCCCAGGTTTGTAGTCGAGTTTTGTTAGGTTAGCTGATTTATAAATTACAAAAGGTAATCAACATTTGTATATTTCTTTTTTCAACTTCAGTTCTTCTGAGAATTGTAACCTCTTATAATCTCAATAATATATATTCATGAATAATATCTGTGACGAAAAGTGCATCCGA

Coding sequence (CDS)

ATGCATTCCATTGTCTCAGCAACTTCAGTGTCTTCCATTCTGGTGAAAGGAAATGGAGGAATTGGCTGCCAGATTACGATGGTTCATTTCAAGGCTAACTCCAGAAGACGCCCACCCAAAAACCTCCTCTGTCCACGACGGGCCAAGCTTCCTCCTGACCCTGCCGTCAACCAATTCTTGAACAACAAAACCTCTGCCCCTTCCCCATCCTTCACCGATTTGATTTCCTCTAAGATTTTCCAAGATGAGCATGAAGAAATCCATGCTTATGATTATACCAAGGATACTGATGTTGTTTGGGATTCAGATGAAATTGAAGCTATTTCATCACTCTTCCAAGGGAGAATCCCTCAGAAACCTGGTAAATTGAATCGGGAGAGACCTCTTCCTCTCCCACTGCCACACAAGCTACGACCACCAAGACTTCCTAACCCTAAAATCCGCCCAACAACAACGGTGTCTTCGCGTGCTTTGCTGTCTAAGAAAGTCTACAAGCGTCCTGATTTTCTTATTGGCCTTGCTAGGGCGATTAGAGATCTATCCCCAGAGGAAAATGTGTCCAAGGTTCTCAATCGGTGGGGTCCGTTTTTGCAGAAGGGATCTCTTTCATTGACAATCAAGGAACTAGGGCATATGGGTCTTCCTGATAGAGCTCTAAAGACGTTCTGTTGGGTACAGGAACAACGTCGACTCTTTCCAGATGATCGTGTTTTGGCCTCAACCGTTGAGGTCCTTTCAAGGAACCACGAACTGAAGGTACCTGTAAACTTGGAAGAGTTCACTAAACTTGCAAGTCGTGGTGTGCTGGAGGCAATGATGAGAGGGTTTATCAAAGGTGGGAGCTTAAATCTTGCTTGGAAGCTTCTTGTAGCTGCGAAGAAGGGTAAGAGAATGTTGGATCCCAGCGTCTATGTGAAGTTGATATTGGAGCTTGGTAAAAACCCTGATAAAAACGTATTGGTTCTTACCTTACTGGAAGAGCTAGGACAAAGAGAAGCCTTGAAGTTGAACCAACAAGATAGTACAACTATAATTAAGGTCTGCACAAGGCTTCGTAAATTTGAAATTGCTGAGAAACTTTATTGCTGGTATGTTGAATCTGGACATGAACCGAGTATGGTTATGTATACTGCCTTAGTTCATAGTCGCTACTCAGACAGGAAATATAGGGAGGCATTATCTTTAGTGTGGGAAATGGAGTCTGCAAACTGTCCTTTTGATCTTCCTGCTTATAATGTAGTGATAAAGCTTTTTGTTGCTCTTGGTGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTTCCCCTACATATGATGTATATCGGAATATGATCACCATTTATTTAGTTTCAGGGAGGTTAGCCAAGTCTAAGGAAATTTATAAGGAAGCGGAGAATGCTGGATTTATCATGGATAAACAAATTACTTCAATGTTGTTGCAAGCAAAAAGATGA

Protein sequence

MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFLNNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQITSMLLQAKR

Homology

[Close]

BLAST of MELO3C004826 vs. ExPASy Swiss-Prot
Match: Q5XET4 (Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana OX=3702 GN=EMB975 PE=2 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 7.9e-136
Identity = 264/475 (55.58%), Postives = 341/475 (71.79%), Query Frame = 0


Query: 19  GGIGCQITMVH-FKANSRRRPPKNLLCPRRAKLPPDPAVNQFLNNKTSAPSPSFTDLISS 78
           G IG  +T V+  + N  ++  KNL  PRR KLPPD  VN FL      P          
Sbjct: 23  GNIG--VTRVNASQRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEP---------- 82

Query: 79  KIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHKL 138
            +  D+ E++       D  VVW+ +EIEAISSLFQ RIPQKP K +R RPLPLP PHKL
Sbjct: 83  LVIDDDDEQVQESVNDDDDAVVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHKL 142

Query: 139 RPPRLPNPKIRPTTTVSSRAL--LSKKVYKRPDFLIGLARAIRDL-SPEENVSKVLNRWG 198
           RP  LP PK      + S AL  +SK+VYK P FLIGLAR I+ L S + +VS VLN+W 
Sbjct: 143 RPLGLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWV 202

Query: 199 PFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLASTVEVLSRNHELKVP 258
            FL+KGSLS TI+ELGHMGLP+RAL+T+ W ++   L PD+R+LAST++VL+++HELK+ 
Sbjct: 203 SFLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL- 262

Query: 259 VNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKN 318
             L+    LAS+ V+EAM++G I+GG LNLA KL++ +K   R+LD SVYVK+ILE+ KN
Sbjct: 263 --LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKN 322

Query: 319 PDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKLYCWYVESGHEPSMV 378
           PDK  LV+ LLEEL +RE LKL+QQD T+I+K+C +L +FE+ E L+ W+  S  EPS+V
Sbjct: 323 PDKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVV 382

Query: 379 MYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDLSRAVRYFAKL 438
           MYT ++HSRYS++KYREA+S+VWEME +NC  DLPAY VVIKLFVAL DL RA+RY++KL
Sbjct: 383 MYTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKL 442

Query: 439 KEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQITSMLLQAKR 490
           KEAGFSPTYD+YR+MI++Y  SGRL K KEI KE E+AG  +DK  +  LLQ ++
Sbjct: 443 KEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479

[Close]

BLAST of MELO3C004826 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 5.0e-13
Identity = 69/322 (21.43%), Postives = 146/322 (45.34%), Query Frame = 0


Query: 173 LARAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLF 232
           L   +  L P  ++++ L+ +   L     +L  KE    G   R+L+ F ++Q Q    
Sbjct: 79  LINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCK 138

Query: 233 PDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGV------LEAMMRGFIKGGSLNLAW 292
           P++ +    + +L R  E  +   LE F ++ S+GV        A++  + + G    + 
Sbjct: 139 PNEHIYTIMISLLGR--EGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 198

Query: 293 KLLVAAKKGKRMLDPSV--YVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTI 352
           +LL   K  K  + PS+  Y  +I    +       +L L  E+ + E ++ +     T+
Sbjct: 199 ELLDRMKNEK--ISPSILTYNTVINACARGGLDWEGLLGLFAEM-RHEGIQPDIVTYNTL 258

Query: 353 IKVCTRLRKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANC 412
           +  C      + AE ++    + G  P +  Y+ LV +    R+  +   L+ EM S   
Sbjct: 259 LSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 318

Query: 413 PFDLPAYNVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKE 472
             D+ +YNV+++ +   G +  A+  F +++ AG +P  + Y  ++ ++  SGR    ++
Sbjct: 319 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 378

Query: 473 IYKEAENAGFIMDKQITSMLLQ 487
           ++ E +++    D    ++L++
Sbjct: 379 LFLEMKSSNTDPDAATYNILIE 395

[Close]

BLAST of MELO3C004826 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.1e-11
Identity = 66/291 (22.68%), Postives = 126/291 (43.30%), Query Frame = 0


Query: 197 LQKGSLSLTIKELGHMGLPDRALKTFCWV---QEQRRLFPDDRVLASTVEVLSRNHELKV 256
           L +  L   +K L   G  +RA+  F W+        L  D +V+   V +L R  +  V
Sbjct: 134 LLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSV 193

Query: 257 ------PVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKK---GKRMLDPSVY 316
                  + L+E+  L        ++  + + G    A  L    K+      ++  +V 
Sbjct: 194 AAKLLDKIPLQEY--LLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVI 253

Query: 317 VKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKLYCWY 376
           + +  ++G++  K   +L +L+E+ + + LK ++   +T++  C R      A++ +   
Sbjct: 254 LDVFGKMGRSWRK---ILGVLDEM-RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 313

Query: 377 VESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDL 436
              G+EP  V Y AL+        Y EALS++ EME  +CP D   YN ++  +V  G  
Sbjct: 314 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 373

Query: 437 SRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFI 476
             A      + + G  P    Y  +I  Y  +G+  ++ +++   + AG +
Sbjct: 374 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 418

[Close]

BLAST of MELO3C004826 vs. ExPASy Swiss-Prot
Match: Q8GZ63 (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX=3702 GN=At5g25630 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 1.0e-10
Identity = 34/109 (31.19%), Postives = 59/109 (54.13%), Query Frame = 0


Query: 357 AEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIK 416
           A+ ++    E+GH PS++ YT L+ +    ++Y    S+V E+E +    D   +N VI 
Sbjct: 64  AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123

Query: 417 LFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEI 466
            F   G++  AV+   K+KE G +PT   Y  +I  Y ++G+  +S E+
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSEL 172

[Close]

BLAST of MELO3C004826 vs. ExPASy Swiss-Prot
Match: Q66GP4 (Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g13770 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.0e-10
Identity = 59/237 (24.89%), Postives = 112/237 (47.26%), Query Frame = 0


Query: 257 LEEFTKLASRGVLEA------MMRGFIKGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILE 316
           LE   ++  +G+ E+      ++R F +   + +  KL   A   K + DP + +K++L 
Sbjct: 268 LEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM 327

Query: 317 LGKNPDKNVLVLTLLEELG--QREALKLNQQDSTTIIKVCTRLRKFEIAEKLYCWYVESG 376
             +  +      T LE +   ++  LK+       I+   ++ R F  A K+Y W ++  
Sbjct: 328 YVREGNME----TTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEE 387

Query: 377 HEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDLSRAV 436
            E   V Y   +++     KY +A  L  EM        + AY+ ++ ++     LS AV
Sbjct: 388 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 447

Query: 437 RYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDK-QITSML 485
           R  AK+K+ G  P   +Y ++I ++  +  L ++++I+KE + A  + DK   TSM+
Sbjct: 448 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMI 500

[Close]

BLAST of MELO3C004826 vs. NCBI nr
Match: XP_008462173.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_008462181.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_008462189.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_016902994.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] >XP_016902996.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo])

HSP 1 Score: 966.8 bits (2498), Expect = 6.8e-278
Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360
           PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420
           YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480

Query: 481 TSMLLQAKR 490
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of MELO3C004826 vs. NCBI nr
Match: XP_004139567.1 (pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >XP_011654198.1 pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >XP_031739920.1 pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >XP_031739926.1 pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >KGN64877.1 hypothetical protein Csa_022712 [Cucumis sativus])

HSP 1 Score: 918.3 bits (2372), Expect = 2.8e-263
Identity = 464/489 (94.89%), Postives = 474/489 (96.93%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           M SIVSATSVSSILVKGNGGIGCQ TMVHFKANSRRRPPKNLLCPRRAKLPP+PAVNQF 
Sbjct: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60

Query: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSP FTDLISSKIFQDEHEEIHA+DYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTT VSSRALLSK+VYKRPDFLIGLAR IRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRAL TFCW QEQ RLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKV VNLEEFTKLASRGVLEAMMRGFI+GGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360
           PSVYVKLILELGKNPDKN+LVLTLLEELGQREALKLNQQD TTI+KVCTRL KFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360

Query: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420
           Y WYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEMES NCPFDLPAY+VVIKLFVA
Sbjct: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTY+VYRNMITIYLVSGRLAK KEIYKEAENAGF+MDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480

Query: 481 TSMLLQAKR 490
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of MELO3C004826 vs. NCBI nr
Match: KAA0052071.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK00686.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 907.5 bits (2344), Expect = 4.9e-260
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360
           PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420
           YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSG 458
           LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSG
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSG 457

[Close]

BLAST of MELO3C004826 vs. NCBI nr
Match: XP_038893977.1 (pentatricopeptide repeat-containing protein At2g01860 [Benincasa hispida] >XP_038893978.1 pentatricopeptide repeat-containing protein At2g01860 [Benincasa hispida])

HSP 1 Score: 872.5 bits (2253), Expect = 1.8e-249
Identity = 448/495 (90.51%), Postives = 465/495 (93.94%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           M SI SATSVSSILVKGNGGIGCQ TM HFK NSRRR PKNLLCPRRAKLPPDPAVNQFL
Sbjct: 1   MDSIFSATSVSSILVKGNGGIGCQATMAHFKTNSRRRLPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPSFTDLISSKIFQ------DEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQG 120
            NKTSAPSPS TDLISS+IFQ      DEHEEIHAYDY KDTDVVWDSDEIEAISSLFQG
Sbjct: 61  KNKTSAPSPSLTDLISSEIFQLPKGEDDEHEEIHAYDY-KDTDVVWDSDEIEAISSLFQG 120

Query: 121 RIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLA 180
           RIPQKPGKLNR+RPLPLPLPHKLRP  LP+PKIRP   VSSRALLSK+VYKRPDFLIGLA
Sbjct: 121 RIPQKPGKLNRDRPLPLPLPHKLRPSGLPDPKIRPRIMVSSRALLSKQVYKRPDFLIGLA 180

Query: 181 RAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPD 240
           RAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTF W QEQ RLFPD
Sbjct: 181 RAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFSWAQEQPRLFPD 240

Query: 241 DRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKK 300
           DRVLASTVEVL+RNHELKVP++LEEFTKLASRGVLEAM+RGFIKGGSLNLAWKLLVAAKK
Sbjct: 241 DRVLASTVEVLARNHELKVPLDLEEFTKLASRGVLEAMVRGFIKGGSLNLAWKLLVAAKK 300

Query: 301 GKRMLDPSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKF 360
            KR+LDPSVYVKLILELGKNPDKNVLVLTLL+ELGQREAL LNQQD+TTIIKVCTRL KF
Sbjct: 301 RKRLLDPSVYVKLILELGKNPDKNVLVLTLLDELGQREALTLNQQDTTTIIKVCTRLGKF 360

Query: 361 EIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVV 420
           EIAEKLY WYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEME+ANCPFDLPAY+V+
Sbjct: 361 EIAEKLYSWYVESGHEPSVVMYTALVHSRYSDRKYREALSLVWEMEAANCPFDLPAYSVM 420

Query: 421 IKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGF 480
           IKLFV LGDLSRAVRYFAKLKEAGF+PTYDVYR MITIYLVSGRLAK KEIYKEAENAGF
Sbjct: 421 IKLFVTLGDLSRAVRYFAKLKEAGFAPTYDVYRKMITIYLVSGRLAKCKEIYKEAENAGF 480

Query: 481 IMDKQITSMLLQAKR 490
           IMDKQITSMLLQ+KR
Sbjct: 481 IMDKQITSMLLQSKR 494

[Close]

BLAST of MELO3C004826 vs. NCBI nr
Match: KAG6585791.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 796.2 bits (2055), Expect = 1.6e-226
Identity = 406/501 (81.04%), Postives = 445/501 (88.82%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           M S+ S T++SSILVK NGGI CQI + HF+ NSRRRPPKNLL PRR KLPPDP VNQFL
Sbjct: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  NNKTSAPSP--SFTDLISSKIF------QDEHEEIHAYDY----TKDTDVVWDSDEIEAI 120
             +TS P P  SF DLISS+         DE EE  A +Y      D+DVVWDS+EIEAI
Sbjct: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120

Query: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPD 180
           +SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPK+RP T VSSRAL+SK+VYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQ 240
           FLIGLARAIRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 RRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKL 300
            RL+PDDRVLASTVEVL+RNHELK+P NL+EFTKLASRGVLEAMMRGFIKGG L+LAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVC 360
           LVAAK GKRMLDPSVYVKLILE+GKNPDKN+LVL LL+ELGQREAL LNQQD++ IIKV 
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLRKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDL 420
           TRL KFEIAE+LY WYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+ANCPFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420

Query: 421 PAYNVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKE 480
           PAY+VV+KLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAK KEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE 480

Query: 481 AENAGFIMDKQITSMLLQAKR 490
           AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of MELO3C004826 vs. ExPASy TrEMBL
Match: A0A1S3CGD0 (pentatricopeptide repeat-containing protein At2g01860 OS=Cucumis melo OX=3656 GN=LOC103500594 PE=4 SV=1)

HSP 1 Score: 966.8 bits (2498), Expect = 3.3e-278
Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360
           PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420
           YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480

Query: 481 TSMLLQAKR 490
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of MELO3C004826 vs. ExPASy TrEMBL
Match: A0A0A0LVM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G144300 PE=4 SV=1)

HSP 1 Score: 918.3 bits (2372), Expect = 1.3e-263
Identity = 464/489 (94.89%), Postives = 474/489 (96.93%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           M SIVSATSVSSILVKGNGGIGCQ TMVHFKANSRRRPPKNLLCPRRAKLPP+PAVNQF 
Sbjct: 1   MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60

Query: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSP FTDLISSKIFQDEHEEIHA+DYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPPFTDLISSKIFQDEHEEIHAHDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTT VSSRALLSK+VYKRPDFLIGLAR IRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPDFLIGLAREIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRAL TFCW QEQ RLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQHRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKV VNLEEFTKLASRGVLEAMMRGFI+GGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360
           PSVYVKLILELGKNPDKN+LVLTLLEELGQREALKLNQQD TTI+KVCTRL KFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVCTRLGKFEIAEKL 360

Query: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420
           Y WYVESGHEPS+VMYTALVHSRYSDRKYREALSLVWEMES NCPFDLPAY+VVIKLFVA
Sbjct: 361 YSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDLPAYSVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQI 480
           LGDLSRAVRYFAKLKEAGFSPTY+VYRNMITIYLVSGRLAK KEIYKEAENAGF+MDKQI
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKEAENAGFMMDKQI 480

Query: 481 TSMLLQAKR 490
           TSMLLQAKR
Sbjct: 481 TSMLLQAKR 489

[Close]

BLAST of MELO3C004826 vs. ExPASy TrEMBL
Match: A0A5D3BQZ3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00260 PE=4 SV=1)

HSP 1 Score: 907.5 bits (2344), Expect = 2.4e-260
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL
Sbjct: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60

Query: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120
           NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP
Sbjct: 61  NNKTSAPSPSFTDLISSKIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKP 120

Query: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180
           GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL
Sbjct: 121 GKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLIGLARAIRDL 180

Query: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240
           SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS
Sbjct: 181 SPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLAS 240

Query: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300
           TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD
Sbjct: 241 TVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLD 300

Query: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360
           PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL
Sbjct: 301 PSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKL 360

Query: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420
           YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA
Sbjct: 361 YCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVA 420

Query: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSG 458
           LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSG
Sbjct: 421 LGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSG 457

[Close]

BLAST of MELO3C004826 vs. ExPASy TrEMBL
Match: A0A6J1GIP2 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454537 PE=4 SV=1)

HSP 1 Score: 793.5 bits (2048), Expect = 5.0e-226
Identity = 406/501 (81.04%), Postives = 444/501 (88.62%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           M S+ S T++SSILVK NGGI CQI + HF+ NSRRRPPKNLL PRR KLPPDP VNQFL
Sbjct: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  NNKTSAPSP--SFTDLISSKIF------QDEHEEIHAYDY----TKDTDVVWDSDEIEAI 120
             +TS P P  SF DLISS+         DE EE  A +Y      D+DVVWDS+EIEAI
Sbjct: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120

Query: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPD 180
           +SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SK+VYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQ 240
           FLIGLARAIRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 RRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKL 300
            RL+PDDRVLASTVEVL+RNHELK+P NL+EFTKLASRGVLEAMMRGFIKGG L+LAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVC 360
           LVAAK GKRMLDPSVYVKLILE+GKNPDKN+LVL LL+ELGQREAL LNQQD++ IIKV 
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLRKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDL 420
           TRL KFEIAE+LY WYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+AN PFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420

Query: 421 PAYNVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKE 480
           PAY+VV+KLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAK KEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGFIMDKQITSMLLQAKR 490
           AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of MELO3C004826 vs. ExPASy TrEMBL
Match: A0A6J1DI37 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020698 PE=4 SV=1)

HSP 1 Score: 789.3 bits (2037), Expect = 9.4e-225
Identity = 403/495 (81.41%), Postives = 438/495 (88.48%), Query Frame = 0


Query: 1   MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
           M  I S++ VSSI+VKGNGGI CQI+M  F AN+RRR PKNLL PRR KLPPDP VNQFL
Sbjct: 1   MDCIFSSSIVSSIMVKGNGGISCQISMARFMANARRRLPKNLLNPRRTKLPPDPGVNQFL 60

Query: 61  NNKTSAPSPSFTDLISSKIFQ------DEHEEIHAYDY---TKDTDVVWDSDEIEAISSL 120
            N TS   PSFTD  SS+  +      D+HEE    +Y    KD +++WDSDEIEAISSL
Sbjct: 61  KNTTSGSGPSFTDFTSSEKIEFPEEEHDDHEEADTENYFVDDKDGEIIWDSDEIEAISSL 120

Query: 121 FQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPDFLI 180
           FQGRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIR  T V SRA LSK+VYKRPDFLI
Sbjct: 121 FQGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRARTGVPSRASLSKQVYKRPDFLI 180

Query: 181 GLARAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRL 240
           GLARAIRDLS EENVSKVLNRW PFL KGSLSLTI+ELGHMGL DRAL++FCW QEQ RL
Sbjct: 181 GLARAIRDLSREENVSKVLNRWAPFLLKGSLSLTIRELGHMGLADRALQSFCWAQEQPRL 240

Query: 241 FPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVA 300
           FPDDRVLASTVEVLSRNHELKVP+NLEEFT+LASRGVLEAM+RGFIKGGSLNLAWKLLV 
Sbjct: 241 FPDDRVLASTVEVLSRNHELKVPLNLEEFTRLASRGVLEAMIRGFIKGGSLNLAWKLLVV 300

Query: 301 AKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRL 360
           AKKG RMLDPSVYVKLILELGKNPDKN+LVLTLL+ELGQREALKLNQQD+T I+KVCTRL
Sbjct: 301 AKKGNRMLDPSVYVKLILELGKNPDKNMLVLTLLDELGQREALKLNQQDTTAIMKVCTRL 360

Query: 361 RKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAY 420
            KFEIAE+LY WYVES HEPS+VMYTAL+HSRYS++KYREALS+VWEME+ANCPFDLPAY
Sbjct: 361 GKFEIAERLYGWYVESVHEPSVVMYTALIHSRYSEKKYREALSVVWEMEAANCPFDLPAY 420

Query: 421 NVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAEN 480
           NVVIKLFVALGDLSRA RYFAKLKEAGF+PTYD+YRN+ITIYLVSGRLAK KEIYKEA+N
Sbjct: 421 NVVIKLFVALGDLSRAARYFAKLKEAGFAPTYDIYRNLITIYLVSGRLAKCKEIYKEAKN 480

Query: 481 AGFIMDKQITSMLLQ 487
           AGFI+DKQITS LLQ
Sbjct: 481 AGFIIDKQITSRLLQ 495

[Close]

BLAST of MELO3C004826 vs. TAIR 10
Match: AT2G01860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 485.3 bits (1248), Expect = 5.6e-137
Identity = 264/475 (55.58%), Postives = 341/475 (71.79%), Query Frame = 0


Query: 19  GGIGCQITMVH-FKANSRRRPPKNLLCPRRAKLPPDPAVNQFLNNKTSAPSPSFTDLISS 78
           G IG  +T V+  + N  ++  KNL  PRR KLPPD  VN FL      P          
Sbjct: 23  GNIG--VTRVNASQRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEP---------- 82

Query: 79  KIFQDEHEEIHAYDYTKDTDVVWDSDEIEAISSLFQGRIPQKPGKLNRERPLPLPLPHKL 138
            +  D+ E++       D  VVW+ +EIEAISSLFQ RIPQKP K +R RPLPLP PHKL
Sbjct: 83  LVIDDDDEQVQESVNDDDDAVVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHKL 142

Query: 139 RPPRLPNPKIRPTTTVSSRAL--LSKKVYKRPDFLIGLARAIRDL-SPEENVSKVLNRWG 198
           RP  LP PK      + S AL  +SK+VYK P FLIGLAR I+ L S + +VS VLN+W 
Sbjct: 143 RPLGLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWV 202

Query: 199 PFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLFPDDRVLASTVEVLSRNHELKVP 258
            FL+KGSLS TI+ELGHMGLP+RAL+T+ W ++   L PD+R+LAST++VL+++HELK+ 
Sbjct: 203 SFLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL- 262

Query: 259 VNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKKGKRMLDPSVYVKLILELGKN 318
             L+    LAS+ V+EAM++G I+GG LNLA KL++ +K   R+LD SVYVK+ILE+ KN
Sbjct: 263 --LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKN 322

Query: 319 PDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKLYCWYVESGHEPSMV 378
           PDK  LV+ LLEEL +RE LKL+QQD T+I+K+C +L +FE+ E L+ W+  S  EPS+V
Sbjct: 323 PDKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVV 382

Query: 379 MYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDLSRAVRYFAKL 438
           MYT ++HSRYS++KYREA+S+VWEME +NC  DLPAY VVIKLFVAL DL RA+RY++KL
Sbjct: 383 MYTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKL 442

Query: 439 KEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFIMDKQITSMLLQAKR 490
           KEAGFSPTYD+YR+MI++Y  SGRL K KEI KE E+AG  +DK  +  LLQ ++
Sbjct: 443 KEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479

[Close]

BLAST of MELO3C004826 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 77.4 bits (189), Expect = 3.5e-14
Identity = 69/322 (21.43%), Postives = 146/322 (45.34%), Query Frame = 0


Query: 173 LARAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQRRLF 232
           L   +  L P  ++++ L+ +   L     +L  KE    G   R+L+ F ++Q Q    
Sbjct: 79  LINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCK 138

Query: 233 PDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGV------LEAMMRGFIKGGSLNLAW 292
           P++ +    + +L R  E  +   LE F ++ S+GV        A++  + + G    + 
Sbjct: 139 PNEHIYTIMISLLGR--EGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 198

Query: 293 KLLVAAKKGKRMLDPSV--YVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTI 352
           +LL   K  K  + PS+  Y  +I    +       +L L  E+ + E ++ +     T+
Sbjct: 199 ELLDRMKNEK--ISPSILTYNTVINACARGGLDWEGLLGLFAEM-RHEGIQPDIVTYNTL 258

Query: 353 IKVCTRLRKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANC 412
           +  C      + AE ++    + G  P +  Y+ LV +    R+  +   L+ EM S   
Sbjct: 259 LSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 318

Query: 413 PFDLPAYNVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKE 472
             D+ +YNV+++ +   G +  A+  F +++ AG +P  + Y  ++ ++  SGR    ++
Sbjct: 319 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 378

Query: 473 IYKEAENAGFIMDKQITSMLLQ 487
           ++ E +++    D    ++L++
Sbjct: 379 LFLEMKSSNTDPDAATYNILIE 395

[Close]

BLAST of MELO3C004826 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 1.5e-12
Identity = 66/291 (22.68%), Postives = 126/291 (43.30%), Query Frame = 0


Query: 197 LQKGSLSLTIKELGHMGLPDRALKTFCWV---QEQRRLFPDDRVLASTVEVLSRNHELKV 256
           L +  L   +K L   G  +RA+  F W+        L  D +V+   V +L R  +  V
Sbjct: 134 LLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSV 193

Query: 257 ------PVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKLLVAAKK---GKRMLDPSVY 316
                  + L+E+  L        ++  + + G    A  L    K+      ++  +V 
Sbjct: 194 AAKLLDKIPLQEY--LLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVI 253

Query: 317 VKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVCTRLRKFEIAEKLYCWY 376
           + +  ++G++  K   +L +L+E+ + + LK ++   +T++  C R      A++ +   
Sbjct: 254 LDVFGKMGRSWRK---ILGVLDEM-RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 313

Query: 377 VESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIKLFVALGDL 436
              G+EP  V Y AL+        Y EALS++ EME  +CP D   YN ++  +V  G  
Sbjct: 314 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 373

Query: 437 SRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKEAENAGFI 476
             A      + + G  P    Y  +I  Y  +G+  ++ +++   + AG +
Sbjct: 374 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 418

[Close]

BLAST of MELO3C004826 vs. TAIR 10
Match: AT5G25630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 7.3e-12
Identity = 34/109 (31.19%), Postives = 59/109 (54.13%), Query Frame = 0


Query: 357 AEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIK 416
           A+ ++    E+GH PS++ YT L+ +    ++Y    S+V E+E +    D   +N VI 
Sbjct: 64  AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123

Query: 417 LFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEI 466
            F   G++  AV+   K+KE G +PT   Y  +I  Y ++G+  +S E+
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSEL 172

[Close]

BLAST of MELO3C004826 vs. TAIR 10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 7.3e-12
Identity = 34/109 (31.19%), Postives = 59/109 (54.13%), Query Frame = 0


Query: 357 AEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDLPAYNVVIK 416
           A+ ++    E+GH PS++ YT L+ +    ++Y    S+V E+E +    D   +N VI 
Sbjct: 64  AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123

Query: 417 LFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEI 466
            F   G++  AV+   K+KE G +PT   Y  +I  Y ++G+  +S E+
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSEL 172

The following BLAST results are available for this feature:

BLAST of MELO3C004826 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XET4	7.9e-136	55.58	Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana OX...	[more]
Q9S7Q2	5.0e-13	21.43	Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop...	[more]
O64624	2.1e-11	22.68	Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop...	[more]
Q8GZ63	1.0e-10	31.19	Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX...	[more]
Q66GP4	3.0e-10	24.89	Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidop...	[more]

BLAST of MELO3C004826 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462173.1	6.8e-278	100.00	PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo] ...	[more]
XP_004139567.1	2.8e-263	94.89	pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus] >XP_0116...	[more]
KAA0052071.1	4.9e-260	100.00	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK00686...	[more]
XP_038893977.1	1.8e-249	90.51	pentatricopeptide repeat-containing protein At2g01860 [Benincasa hispida] >XP_03...	[more]
KAG6585791.1	1.6e-226	81.04	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of MELO3C004826 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CGD0	3.3e-278	100.00	pentatricopeptide repeat-containing protein At2g01860 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0LVM0	1.3e-263	94.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G144300 PE=4 SV=1	[more]
A0A5D3BQZ3	2.4e-260	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1GIP2	5.0e-226	81.04	pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1DI37	9.4e-225	81.41	pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Momordica ch...	[more]

BLAST of MELO3C004826 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01860.1	5.6e-137	55.58	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G74850.1	3.5e-14	21.43	plastid transcriptionally active 2	[more]
AT2G18940.1	1.5e-12	22.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G25630.1	7.3e-12	31.19	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G25630.2	7.3e-12	31.19	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 316..489 e-value: 1.0E-24 score: 89.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 171..294 e-value: 5.1E-6 score: 28.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 395..453 e-value: 2.4E-5 score: 24.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 410..442 e-value: 1.6E-4 score: 19.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 407..441 score: 10.446177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..149
None	No IPR available	PANTHER	PTHR46128	MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1	coord: 72..464
None	No IPR available	PANTHER	PTHR46128:SF179	TETRATRICOPEPTIDE REPEAT-LIKE SUPERFAMILY PROTEIN	coord: 72..464

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004826.1	MELO3C004826.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding