MELO3C013601 (gene) Melon (DHL92) v4

Overview
NameMELO3C013601
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr11: 17870815 .. 17871156 (-)
RNA-Seq ExpressionMELO3C013601
SyntenyMELO3C013601
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGAAAACAAAGCTTTAGTCGAAGAAGCCCTTAAAAAGTACAAAGCTAGCAACCCTCAAGATGATACTAAACGAGTTCGTTCTGACGGCCTTATGTCGGAACAAGCACAACCAAACACCATGACCCACGATTCTAAAGGTCTTAGATCAAGTCAAAGGGTCAAAATAAAGATATTAAAGCCAATCATCATCAATGGCATAGAACTGCAGATGACAGAAGTGAACACAGAAGCCATGCTTAGAATGCTCTTTGAAGAAAAGGTGAGAAGAGAAGGGTTGAAGAAGGAAGAAGAGGAAGAAGAAAAAAGAAGAGGAAAAGGAAAAGGCGAGAAAGGATAG

mRNA sequence

ATGTCTGAAAACAAAGCTTTAGTCGAAGAAGCCCTTAAAAAGTACAAAGCTAGCAACCCTCAAGATGATACTAAACGAGTTCGTTCTGACGGCCTTATGTCGGAACAAGCACAACCAAACACCATGACCCACGATTCTAAAGGTCTTAGATCAAGTCAAAGGGTCAAAATAAAGATATTAAAGCCAATCATCATCAATGGCATAGAACTGCAGATGACAGAAGTGAACACAGAAGCCATGCTTAGAATGCTCTTTGAAGAAAAGGTGAGAAGAGAAGGGTTGAAGAAGGAAGAAGAGGAAGAAGAAAAAAGAAGAGGAAAAGGAAAAGGCGAGAAAGGATAG

Coding sequence (CDS)

ATGTCTGAAAACAAAGCTTTAGTCGAAGAAGCCCTTAAAAAGTACAAAGCTAGCAACCCTCAAGATGATACTAAACGAGTTCGTTCTGACGGCCTTATGTCGGAACAAGCACAACCAAACACCATGACCCACGATTCTAAAGGTCTTAGATCAAGTCAAAGGGTCAAAATAAAGATATTAAAGCCAATCATCATCAATGGCATAGAACTGCAGATGACAGAAGTGAACACAGAAGCCATGCTTAGAATGCTCTTTGAAGAAAAGGTGAGAAGAGAAGGGTTGAAGAAGGAAGAAGAGGAAGAAGAAAAAAGAAGAGGAAAAGGAAAAGGCGAGAAAGGATAG

Protein sequence

MSENKALVEEALKKYKASNPQDDTKRVRSDGLMSEQAQPNTMTHDSKGLRSSQRVKIKILKPIIINGIELQMTEVNTEAMLRMLFEEKVRREGLKKEEEEEEKRRGKGKGEKG
Homology
[Close]
BLAST of MELO3C013601 vs. NCBI nr
Match: KGN57698.1 (hypothetical protein Csa_009837 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-06
Identity = 47/104 (45.19%), Postives = 67/104 (64.42%), Query Frame = 0 

Query: 16  KASNPQDDTKRVRSDGLMSEQAQPNTMTHDSKGLRSSQRVKI------KILKPIIINGIE 75
           K S   D+ ++VR +  MSEQA+ NTM HDS+G  S+Q V+       +  +P++INGIE
Sbjct: 10  KPSKSHDEFEKVRFEITMSEQAKVNTMIHDSEGTSSNQGVETEKNKGKEARRPLMINGIE 69

Query: 76  LQMTEVNTEAMLRMLFEEKVRREGLKKEEEEEEKRRGK-GKGEK 113
           +Q++E N  A+L  ++EEK  RE  KKE+EE+EK   K GK  K
Sbjct: 70  IQLSENNIYALLLRVYEEKKIREKEKKEKEEKEKAHKKEGKRTK 113

[Close]
BLAST of MELO3C013601 vs. ExPASy TrEMBL
Match: A0A0A0L7C6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G254040 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06
Identity = 47/104 (45.19%), Postives = 67/104 (64.42%), Query Frame = 0 

Query: 16  KASNPQDDTKRVRSDGLMSEQAQPNTMTHDSKGLRSSQRVKI------KILKPIIINGIE 75
           K S   D+ ++VR +  MSEQA+ NTM HDS+G  S+Q V+       +  +P++INGIE
Sbjct: 10  KPSKSHDEFEKVRFEITMSEQAKVNTMIHDSEGTSSNQGVETEKNKGKEARRPLMINGIE 69

Query: 76  LQMTEVNTEAMLRMLFEEKVRREGLKKEEEEEEKRRGK-GKGEK 113
           +Q++E N  A+L  ++EEK  RE  KKE+EE+EK   K GK  K
Sbjct: 70  IQLSENNIYALLLRVYEEKKIREKEKKEKEEKEKAHKKEGKRTK 113

The following BLAST results are available for this feature:
BLAST of MELO3C013601 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C013601 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57698.12.9e-0645.19hypothetical protein Csa_009837 [Cucumis sativus][more]
BLAST of MELO3C013601 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7C61.4e-0645.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G254040 PE=4 SV=1[more]
BLAST of MELO3C013601 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013601.1MELO3C013601.1mRNA