MELO3C034731.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C034731.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr11: 4545391 .. 4545582 (+)
Sequence length192
RNA-Seq ExpressionMELO3C034731.1
SyntenyMELO3C034731.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGATGCCACAAATACAACCATCAAATATTTCAAAGCTAATCCAATATATCATGACTTGAAGTTCAATTCAAACCAAAGCATTACGATTACAGCCATGGAACTAAAGGTAAAAGTTCATAATCATATTGCTTTTGAGCAGAGTGACAAGAAGAGACAGACAAAGGGAGAATATCCTTCAGCATTATAA

mRNA sequence

ATGCTGGATGCCACAAATACAACCATCAAATATTTCAAAGCTAATCCAATATATCATGACTTGAAGTTCAATTCAAACCAAAGCATTACGATTACAGCCATGGAACTAAAGGTAAAAGTTCATAATCATATTGCTTTTGAGCAGAGTGACAAGAAGAGACAGACAAAGGGAGAATATCCTTCAGCATTATAA

Coding sequence (CDS)

ATGCTGGATGCCACAAATACAACCATCAAATATTTCAAAGCTAATCCAATATATCATGACTTGAAGTTCAATTCAAACCAAAGCATTACGATTACAGCCATGGAACTAAAGGTAAAAGTTCATAATCATATTGCTTTTGAGCAGAGTGACAAGAAGAGACAGACAAAGGGAGAATATCCTTCAGCATTATAA

Protein sequence

MLDATNTTIKYFKANPIYHDLKFNSNQSITITAMELKVKVHNHIAFEQSDKKRQTKGEYPSAL
Homology
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BLAST of MELO3C034731.1 vs. NCBI nr
Match: KAE8651868.1 (hypothetical protein Csa_006090 [Cucumis sativus])

HSP 1 Score: 103.2 bits (256), Expect = 8.3e-19
Identity = 51/60 (85.00%), Postives = 52/60 (86.67%), Query Frame = 0 

Query: 1  MLDATNTTIKYFKANPIYHDLKFNSNQSITITAMELKVKVHNHIAFEQSDKKRQTKGEYP 60
          MLDAT TTIKYFKANPIYHDLKFNSNQSITITAMELKVKVHN IAFEQSDK  +T    P
Sbjct: 1  MLDATKTTIKYFKANPIYHDLKFNSNQSITITAMELKVKVHNQIAFEQSDKNEETDEAKP 60

The following BLAST results are available for this feature:
BLAST of MELO3C034731.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651868.18.3e-1985.00hypothetical protein Csa_006090 [Cucumis sativus][more]
BLAST of MELO3C034731.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034731.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034731.1 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C034731MELO3C034731gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034731.1:exon:311220MELO3C034731.1:exon:311220exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C034731.1:cdsMELO3C034731.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C034731.1MELO3C034731.1-proteinpolypeptide