MELO3C011846 (gene) Melon (DHL92) v4

Overview


Name	MELO3C011846
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Transcription termination factor MTERF5
Location	chr10: 4340087 .. 4341503 (-)
RNA-Seq Expression	MELO3C011846
Synteny	MELO3C011846

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAAAACCCTAACCAAAGCCCTTACTTGATTTTCTTCAATCCCATCCCGAAATGTTCAAATTTTCCTCCACATTTCTTCTACATTTCATCCAAAAACGTTTTCTCAATACCGTTTCTACTTCTACCTTGCCTTTAGCCTCCGTTTCTACCATCCAATTCCTCACAAATTCATGTGGCCTTTCTTCAGGATCTCCTATTTCCAGAGGTCGAAAGCTCCAATTCGATGAAGAAAACCTCCAGCAGTACGGAGCCGTTATCGGTTTCTTCAAATCACATGGATTCGAGGATTCACAGATCGCCAAGTTGGTCTCGAGGAAACCTTCAATCCTTCACTCCACGGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGATCGTCGGTCCTTTACTTACTAAGCTAATACTATCGAACTATATGATTCTTTTTAGGAGCTTAGATTCTCAGTTGAAACCAACATTTCGCCTCATTAAGGAAATGCTTGGATCGGATAAAAAGGTAACTGCTGCTATTTGTCGTACTTCGTGGCTTCTAACTTCTAATTCCAATGGTACTGTGCGATCTAACATCGATGTTTTGGTCAGTGAAGGAGTACCTTCTACGAATATAGCGCAAATCATTGCATTGAACCCTAGAAGTGTTATGCGAAAGGTTGATAGAATGATTCGTGCAGTGAAAACGGTTAAAGAATTAGGCGTTGAACCAAAGGATGGTATGTTTGTTTATGCAGTTAGTGTGGCGGTTTCGATGAGTGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGCATTTAAGAGATTTCCACGTTTTTTAACTTGTTCAGAGGAGAAAATGAGGGATATTGCAGATTTCTGTCTCAACACTGCAAAGTTGGATCCAGGAACTCTAATTTCTTACCCTCAGTTCTTCAATTATTCCGTCCACAAGCGGCTGCAACCAAGGTACAAAGTTCTTGAGGTTTTAAAGATGAAAAATCTTCTTAAAACCAAAAATATCGGTTTGTTATTTGTGGAAGGGGAGAGAAGATTTGTGGAGAAATATATTGTTAAGCATTTTGATAAAATCCCAAATCTGATAGACATATACCTGGGCAATGTGAAAGCCGAAACCAAATCTGTTCTATAGGACTGGAAAGTTGTAAGTTAATAACGTTCTTATAGTTTAAATTTGAGCGTCATGATCTTCAAATGGGAGAGCATTTTTTATGTTACTTCTTGAGCTTTTCAAGATCTTTCTCTCTGTGTGTTTTCAGGTAGGAAAGTTGTGTTGTCTTCCATCCAAATGAAGGCAGTTAGTTAGGTAAATCTATTTGGTGTATATTTGTTCATAGACATGTTAATCCTGAAGTTGAATCCAATGATGATGTT

mRNA sequence

ATTCAAAACCCTAACCAAAGCCCTTACTTGATTTTCTTCAATCCCATCCCGAAATGTTCAAATTTTCCTCCACATTTCTTCTACATTTCATCCAAAAACGTTTTCTCAATACCGTTTCTACTTCTACCTTGCCTTTAGCCTCCGTTTCTACCATCCAATTCCTCACAAATTCATGTGGCCTTTCTTCAGGATCTCCTATTTCCAGAGGTCGAAAGCTCCAATTCGATGAAGAAAACCTCCAGCAGTACGGAGCCGTTATCGGTTTCTTCAAATCACATGGATTCGAGGATTCACAGATCGCCAAGTTGGTCTCGAGGAAACCTTCAATCCTTCACTCCACGGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGATCGTCGGTCCTTTACTTACTAAGGAAATGCTTGGATCGGATAAAAAGGTAACTGCTGCTATTTGTCGTACTTCGTGGCTTCTAACTTCTAATTCCAATGGTACTGTGCGATCTAACATCGATGTTTTGGTCAGTGAAGGAGTACCTTCTACGAATATAGCGCAAATCATTGCATTGAACCCTAGAAGTGTTATGCGAAAGGTTGATAGAATGATTCGTGCAGTGAAAACGGTTAAAGAATTAGGCGTTGAACCAAAGGATGGTATGTTTGTTTATGCAGTTAGTGTGGCGGTTTCGATGAGTGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGCATTTAAGAGATTTCCACGTTTTTTAACTTGTTCAGAGGAGAAAATGAGGGATATTGCAGATTTCTGTCTCAACACTGCAAAGTTGGATCCAGGAACTCTAATTTCTTACCCTCAGTTCTTCAATTATTCCGTCCACAAGCGGCTGCAACCAAGGTACAAAGTTCTTGAGGTTTTAAAGATGAAAAATCTTCTTAAAACCAAAAATATCGGTTTGTTATTTGTGGAAGGGGAGAGAAGATTTGTGGAGAAATATATTGTTAAGCATTTTGATAAAATCCCAAATCTGATAGACATATACCTGGGCAATGTGAAAGCCGAAACCAAATCTGTTCTATAGGACTGGAAAGTTGTAAGTTAATAACGTTCTTATAGTTTAAATTTGAGCGTCATGATCTTCAAATGGGAGAGCATTTTTTATGTTACTTCTTGAGCTTTTCAAGATCTTTCTCTCTGTGTGTTTTCAGGTAGGAAAGTTGTGTTGTCTTCCATCCAAATGAAGGCAGTTAGTTAGGTAAATCTATTTGGTGTATATTTGTTCATAGACATGTTAATCCTGAAGTTGAATCCAATGATGATGTT

Coding sequence (CDS)

ATGTTCAAATTTTCCTCCACATTTCTTCTACATTTCATCCAAAAACGTTTTCTCAATACCGTTTCTACTTCTACCTTGCCTTTAGCCTCCGTTTCTACCATCCAATTCCTCACAAATTCATGTGGCCTTTCTTCAGGATCTCCTATTTCCAGAGGTCGAAAGCTCCAATTCGATGAAGAAAACCTCCAGCAGTACGGAGCCGTTATCGGTTTCTTCAAATCACATGGATTCGAGGATTCACAGATCGCCAAGTTGGTCTCGAGGAAACCTTCAATCCTTCACTCCACGGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGATCGTCGGTCCTTTACTTACTAAGGAAATGCTTGGATCGGATAAAAAGGTAACTGCTGCTATTTGTCGTACTTCGTGGCTTCTAACTTCTAATTCCAATGGTACTGTGCGATCTAACATCGATGTTTTGGTCAGTGAAGGAGTACCTTCTACGAATATAGCGCAAATCATTGCATTGAACCCTAGAAGTGTTATGCGAAAGGTTGATAGAATGATTCGTGCAGTGAAAACGGTTAAAGAATTAGGCGTTGAACCAAAGGATGGTATGTTTGTTTATGCAGTTAGTGTGGCGGTTTCGATGAGTGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGCATTTAAGAGATTTCCACGTTTTTTAACTTGTTCAGAGGAGAAAATGAGGGATATTGCAGATTTCTGTCTCAACACTGCAAAGTTGGATCCAGGAACTCTAATTTCTTACCCTCAGTTCTTCAATTATTCCGTCCACAAGCGGCTGCAACCAAGGTACAAAGTTCTTGAGGTTTTAAAGATGAAAAATCTTCTTAAAACCAAAAATATCGGTTTGTTATTTGTGGAAGGGGAGAGAAGATTTGTGGAGAAATATATTGTTAAGCATTTTGATAAAATCCCAAATCTGATAGACATATACCTGGGCAATGTGAAAGCCGAAACCAAATCTGTTCTATAG

Protein sequence

MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEENLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVLVSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDSTWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQFFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDIYLGNVKAETKSVL

Homology

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BLAST of MELO3C011846 vs. NCBI nr
Match: XP_008446012.1 (PREDICTED: transcription termination factor MTERF5, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 662.9 bits (1709), Expect = 1.5e-186
Identity = 348/373 (93.30%), Postives = 348/373 (93.30%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60
           MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60

Query: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLT- 120
           NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLT 
Sbjct: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTK 120

Query: 121 ------------------------KEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180
                                   KEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL
Sbjct: 121 LILSNYMILFRSLDSQLKPTFRLIKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180

Query: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240
           VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS
Sbjct: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240

Query: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300
           TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ
Sbjct: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300

Query: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 349
           FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI
Sbjct: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 360

[Close]

BLAST of MELO3C011846 vs. NCBI nr
Match: KAA0034175.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15744.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 548.9 bits (1413), Expect = 3.2e-152
Identity = 288/314 (91.72%), Postives = 289/314 (92.04%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60
           MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60

Query: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLT- 120
           NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLT 
Sbjct: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTK 120

Query: 121 ------------------------KEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180
                                   KEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL
Sbjct: 121 LILSNYMILFRSLDSQLKPTFRLIKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180

Query: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240
           VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS
Sbjct: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240

Query: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 290
           TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ
Sbjct: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300

[Close]

BLAST of MELO3C011846 vs. NCBI nr
Match: KAA0034158.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15761.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 540.8 bits (1392), Expect = 8.6e-150
Identity = 283/372 (76.08%), Postives = 311/372 (83.60%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60
           MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDE+
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60

Query: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPL--- 120
           N+QQY AVIGFFKSHGFE+SQIAKLVSR+PSIL STVST+LKPKF+FLQEIGIVGPL   
Sbjct: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLPK 120

Query: 121 ----------------------LTKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180
                                 L KEML SD+KV AAICR SW+L++NS GT+RSNIDVL
Sbjct: 121 VILSNPGILFKSVNSQLKPTFCLIKEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180

Query: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240
           VSEGVPSTNIA++IALNPRS+MR VDR+I AVKTVKELGVEPKD  FVYAVS   SMSDS
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240

Query: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300
           +WKKKINVMKSLGWSE EIFTAFK+ P FLTCSEEKMRD+ADFC NTAKLDP ++I YP+
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300

Query: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 348
           FF  SV KRL+PRYKV EVLK+KNLLK KNI   F+ GER FVE  +VKH D+IPNL+DI
Sbjct: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 360

[Close]

BLAST of MELO3C011846 vs. NCBI nr
Match: XP_004135534.3 (transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus] >XP_011655533.2 transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus] >XP_031742293.1 transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus] >KAE8648643.1 hypothetical protein Csa_007858 [Cucumis sativus])

HSP 1 Score: 513.8 bits (1322), Expect = 1.1e-141
Identity = 262/373 (70.24%), Postives = 303/373 (81.23%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60
           MFK SSTFLLHFI KRFLNT+STSTLPL SVSTIQFLTNSCGLSSGSP S GR LQFD++
Sbjct: 1   MFKISSTFLLHFIHKRFLNTISTSTLPLRSVSTIQFLTNSCGLSSGSPSSNGRMLQFDDK 60

Query: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLL-- 120
           ++QQY +VIGF KSHGF++ QIA LVSR+P+IL S VSTNLKPKFEFLQEIG VGPLL  
Sbjct: 61  SIQQYESVIGFLKSHGFDNLQIANLVSRRPNILGSRVSTNLKPKFEFLQEIGFVGPLLPK 120

Query: 121 -----------------------TKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180
                                   KE+L SD++V AAIC +SWLLT +    ++ N+DVL
Sbjct: 121 IILANPPLLLRSLHSHLKPSLVFLKEILESDERVIAAICSSSWLLTYDFERVIKPNVDVL 180

Query: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240
            SEGVPS NIA++IAL+PR++M+KVDRMI AVKT KELG+EPK GMF+YAV V +SMSDS
Sbjct: 181 ASEGVPSRNIAKLIALDPRTIMQKVDRMIHAVKTAKELGIEPKSGMFIYAVVVRLSMSDS 240

Query: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300
            WKKKINVMKSLGWSE+EIFTA+K++P +L CSEEK+RD+ADFC NTAKLDPGTLI+YP 
Sbjct: 241 NWKKKINVMKSLGWSEDEIFTAYKKYPPYLNCSEEKLRDVADFCSNTAKLDPGTLITYPN 300

Query: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 349
           FF +SV KRLQPRY+VLEVLK+KNLLK K I   FVEGERRFVEKY+VKH D+IPNL+DI
Sbjct: 301 FFTFSVEKRLQPRYRVLEVLKLKNLLKNKKIAPFFVEGERRFVEKYVVKHLDEIPNLMDI 360

[Close]

BLAST of MELO3C011846 vs. NCBI nr
Match: KAA0034139.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15780.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 511.1 bits (1315), Expect = 7.3e-141
Identity = 271/374 (72.46%), Postives = 301/374 (80.48%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60
           MFK SSTFLLHFIQKR  NTVSTSTLPL SVSTIQFLTNSCGL S SP S+GRKLQF E+
Sbjct: 1   MFKISSTFLLHFIQKRSFNTVSTSTLPLPSVSTIQFLTNSCGLFSASPTSKGRKLQFHEK 60

Query: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPL--- 120
           N+Q+Y AVI +FKSHGFE+S IAKLVS++PSIL S VSTNLKPKF+FLQEIGIVGPL   
Sbjct: 61  NIQEYEAVICYFKSHGFENSHIAKLVSKQPSILQSIVSTNLKPKFDFLQEIGIVGPLLPK 120

Query: 121 ----------------------LTKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180
                                 L KEML SD+KVT AICR SW+L++NS GT+RSN DVL
Sbjct: 121 VILSNPGILFRSVNSQLKPTFRLIKEMLESDEKVTVAICRASWILSANSKGTMRSNFDVL 180

Query: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240
           VSEGVPSTNIA++IALNPRS+MR V RMI AVKTVKELGVEPKD  FVYAVS   SM+ S
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVGRMIHAVKTVKELGVEPKDRAFVYAVSAVGSMNHS 240

Query: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300
           +WKKKINVMKSLGWSE EIFTAFKR+P  LTCSEEKMRD+ADFC NTAKLDPGTLISYP 
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLL--FVEGERRFVEKYIVKHFDKIPNLI 348
           FFN SV KRL+PRYKVLEVLK+KNLLK K I L   F++GER FV+  +VKH D+IPNL+
Sbjct: 301 FFNLSVDKRLRPRYKVLEVLKVKNLLKNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLM 360

[Close]

BLAST of MELO3C011846 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.0e-07
Identity = 61/259 (23.55%), Postives = 116/259 (44.79%), Query Frame = 0


Query: 68  VIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTKEMLGSDK 127
           V+ F    G   S I  ++ ++P I   +++ NLKP   FL+ +GI            DK
Sbjct: 235 VVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGI------------DK 294

Query: 128 KVTAAICRTSWLLTSNSNGTVRSNIDVLVSEGVPSTNIAQIIALNPRSVMRKVDRMIR-A 187
              A I      + + S   + S ++ L   G+    I +I+   P  +   V+  +R  
Sbjct: 295 NQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPT 354

Query: 188 VKTVKELGVEPKDGMFVYAVSVAVSMSDSTWKKKINVMKSLGWSENEIFTAFKRFPRFLT 247
           ++  + L V+    +     +  +S+ +S  K         G+  +EI     R+    T
Sbjct: 355 MEYFRSLNVDVAVLLHRCPQTFGLSI-ESNLKPVTEFFLEKGFGLDEIGIMISRYGALYT 414

Query: 248 CS-EEKMRDIADFCLNTAKLDPGTLISYPQFFNYSVHKRLQPRYKVLEVLKMKNLLKTKN 307
            S +E +    D+   T       L+ +PQFF YS+ +R++PRY++++   ++ LL  + 
Sbjct: 415 FSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVR-LLLNQV 474

Query: 308 IGLLFVEGERRFVEKYIVK 325
           + L  +E E + V+K ++K
Sbjct: 475 LSLSGIEFE-KVVKKKMMK 477

[Close]

BLAST of MELO3C011846 vs. ExPASy Swiss-Prot
Match: Q9C6A1 (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.6e-05
Identity = 55/270 (20.37%), Postives = 113/270 (41.85%), Query Frame = 0


Query: 64  QYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTK--- 123
           ++   +   KS GF DS +++++S  P +L       ++ K EFL  IGI    + +   
Sbjct: 146 KFNECVRVLKSLGFCDSTVSRILSSFPGVL-LVNEIEIRRKIEFLVGIGIARDNIERFFH 205

Query: 124 ---EMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVLVSEGVPSTNIAQIIALNPRSVM 183
              E+LG                   +   ++  +D  +  G    ++ + IA  PR + 
Sbjct: 206 VFPEVLG-----------------IGTETRLKPLLDEFMKMGFSKDDVKKEIAREPRVLG 265

Query: 184 RKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDSTWKKKINVMKSLGWSENEIFTA 243
            ++  + R ++ +  L  + ++ + V  +S     +    K +++ +   G    + F  
Sbjct: 266 LELGELPRCLELINTL--KCREVIRVSIISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKV 325

Query: 244 FKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQFFNYSVHKRLQPRYKVLEVLKM 303
             + PR +    E +    +F  N        L   P++   ++ K++ PRY V++ LK+
Sbjct: 326 VWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKL 385

Query: 304 KNLLKTKNIGL--LFVEGERRFVEKYIVKH 326
           K  L   +IGL  L     +RF   Y++ +
Sbjct: 386 KGGLGC-DIGLKGLIKPSMKRFYNLYVMPY 394

[Close]

BLAST of MELO3C011846 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04
Identity = 43/175 (24.57%), Postives = 88/175 (50.29%), Query Frame = 0


Query: 139 LLTSNSNGTVRSNIDVLVSE-GVPSTNIAQIIALNPRSVMRKVDRMIR-AVKTVKELGVE 198
           LLTS+    +   +  L +E  +   +I + I+  PR ++  VD  +R A+  +K LG  
Sbjct: 92  LLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFV 151

Query: 199 PKDGMFVYAVSVAVSMSDSTWKKKINVM-KSLGWSENEIFTAFKRFPRFLTCS-EEKMRD 258
            +D +      + VS  + T   KI  + + LG++  E+     R P  LT S +  +  
Sbjct: 152 GRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVP 211

Query: 259 IADFCLNTAKLDPGTLISYPQFFNYSVHKRLQPRYKVLE----VLKMKNLLKTKN 306
             +F +   + D   L  +PQ+F++S+ ++++PR+++L+    ++ +  +LK  +
Sbjct: 212 KVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSD 266

[Close]

BLAST of MELO3C011846 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04
Identity = 50/228 (21.93%), Postives = 96/228 (42.11%), Query Frame = 0


Query: 69  IGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTKEMLGSDKK 128
           I + K  G    ++ +L++ KP ++  ++    KP  ++   +GI      KE +   K+
Sbjct: 356 INYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGI-----PKEGM---KR 415

Query: 129 VTAAICRTSWLLTSNSNGTVRSNIDVLVSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVK 188
           +         L   +   T+   +  L   G+P+  I  ++   P  +   + + IR V 
Sbjct: 416 ILVV---KPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVV 475

Query: 189 --TVKELGVEPKDGMFVYAVSVAVSMSDSTWKKKINVMK--SLGWSENEIFTAFKRFPRF 248
              +   GV  KD   V A+  A+       K + N+    SLG    ++      FP  
Sbjct: 476 IFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPML 535

Query: 249 LTCSEEKMRDIADFCLNTAKLDPGTLISYPQFFNYSVHKRLQPRYKVL 293
           L  + + +R    +   T       LI +P+FF+YS+ +R+ PR+ ++
Sbjct: 536 LRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIM 572

[Close]

BLAST of MELO3C011846 vs. ExPASy TrEMBL
Match: A0A1S3BEV9 (transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488866 PE=3 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 7.3e-187
Identity = 348/373 (93.30%), Postives = 348/373 (93.30%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60
           MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60

Query: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLT- 120
           NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLT 
Sbjct: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTK 120

Query: 121 ------------------------KEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180
                                   KEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL
Sbjct: 121 LILSNYMILFRSLDSQLKPTFRLIKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180

Query: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240
           VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS
Sbjct: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240

Query: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300
           TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ
Sbjct: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300

Query: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 349
           FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI
Sbjct: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 360

[Close]

BLAST of MELO3C011846 vs. ExPASy TrEMBL
Match: A0A5A7SY90 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002470 PE=3 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.5e-152
Identity = 288/314 (91.72%), Postives = 289/314 (92.04%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60
           MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60

Query: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLT- 120
           NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLT 
Sbjct: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTK 120

Query: 121 ------------------------KEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180
                                   KEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL
Sbjct: 121 LILSNYMILFRSLDSQLKPTFRLIKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180

Query: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240
           VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS
Sbjct: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240

Query: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 290
           TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ
Sbjct: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300

[Close]

BLAST of MELO3C011846 vs. ExPASy TrEMBL
Match: A0A5A7SU45 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002650 PE=3 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 4.2e-150
Identity = 283/372 (76.08%), Postives = 311/372 (83.60%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60
           MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDE+
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60

Query: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPL--- 120
           N+QQY AVIGFFKSHGFE+SQIAKLVSR+PSIL STVST+LKPKF+FLQEIGIVGPL   
Sbjct: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLPK 120

Query: 121 ----------------------LTKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180
                                 L KEML SD+KV AAICR SW+L++NS GT+RSNIDVL
Sbjct: 121 VILSNPGILFKSVNSQLKPTFCLIKEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180

Query: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240
           VSEGVPSTNIA++IALNPRS+MR VDR+I AVKTVKELGVEPKD  FVYAVS   SMSDS
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240

Query: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300
           +WKKKINVMKSLGWSE EIFTAFK+ P FLTCSEEKMRD+ADFC NTAKLDP ++I YP+
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300

Query: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 348
           FF  SV KRL+PRYKV EVLK+KNLLK KNI   F+ GER FVE  +VKH D+IPNL+DI
Sbjct: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 360

[Close]

BLAST of MELO3C011846 vs. ExPASy TrEMBL
Match: A0A5D3CWN7 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002840 PE=3 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 3.5e-141
Identity = 271/374 (72.46%), Postives = 301/374 (80.48%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60
           MFK SSTFLLHFIQKR  NTVSTSTLPL SVSTIQFLTNSCGL S SP S+GRKLQF E+
Sbjct: 1   MFKISSTFLLHFIQKRSFNTVSTSTLPLPSVSTIQFLTNSCGLFSASPTSKGRKLQFHEK 60

Query: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPL--- 120
           N+Q+Y AVI +FKSHGFE+S IAKLVS++PSIL S VSTNLKPKF+FLQEIGIVGPL   
Sbjct: 61  NIQEYEAVICYFKSHGFENSHIAKLVSKQPSILQSIVSTNLKPKFDFLQEIGIVGPLLPK 120

Query: 121 ----------------------LTKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180
                                 L KEML SD+KVT AICR SW+L++NS GT+RSN DVL
Sbjct: 121 VILSNPGILFRSVNSQLKPTFRLIKEMLESDEKVTVAICRASWILSANSKGTMRSNFDVL 180

Query: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240
           VSEGVPSTNIA++IALNPRS+MR V RMI AVKTVKELGVEPKD  FVYAVS   SM+ S
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVGRMIHAVKTVKELGVEPKDRAFVYAVSAVGSMNHS 240

Query: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300
           +WKKKINVMKSLGWSE EIFTAFKR+P  LTCSEEKMRD+ADFC NTAKLDPGTLISYP 
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLL--FVEGERRFVEKYIVKHFDKIPNLI 348
           FFN SV KRL+PRYKVLEVLK+KNLLK K I L   F++GER FV+  +VKH D+IPNL+
Sbjct: 301 FFNLSVDKRLRPRYKVLEVLKVKNLLKNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLM 360

[Close]

BLAST of MELO3C011846 vs. ExPASy TrEMBL
Match: A0A5D3CWA2 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002480 PE=3 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.4e-137
Identity = 262/373 (70.24%), Postives = 298/373 (79.89%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60
           MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVST++FLTNSCGLSSGSP S GRKLQFDE+
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLT- 120
           N+QQY AVIGF KSHG E+ QIAKLVSRKP IL S VSTNLKPKFEFLQEIG VGPLL+ 
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIGFVGPLLSK 120

Query: 121 ------------------------KEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180
                                   KE+L SD++VTAAI  + WLL S+  G ++SNIDVL
Sbjct: 121 LILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGILKSNIDVL 180

Query: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240
            SEGVPS NIA++I  N R++MRKVDRMI  VKTVKELG+EPK GMFV+A+ +  S+SDS
Sbjct: 181 ASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSDS 240

Query: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300
           TWKKKINVMKSLGWSE EIFTAFK+ P FL CSEEKMRD+ADFC NTAKLDPG++I  P+
Sbjct: 241 TWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICPK 300

Query: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 349
            F  SV KRLQPRYKVLEVLK+KNLLK  NI  + V+ ER FV+K++V+H D+IPNL+DI
Sbjct: 301 IFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMDI 360

[Close]

BLAST of MELO3C011846 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-38
Identity = 99/336 (29.46%), Postives = 166/336 (49.40%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPISRGRKLQFDEENLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSI 92
           T+ +L +SCGLS  S     RKL  D    ++   V+   + HGF  +QI+ LV ++P +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLDSP--ERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LHSTVSTNLKPKFEFLQEIGIVGPLLT-------------------------KEMLGSDK 152
           L +   + L PK  F   IG+   LL                          K +L SD+
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 KVTAAICRTSWLLTSNSNGTVRSNIDVLVSEGVPSTNIAQIIALNPRSVMRKVDRMIRAV 212
           K+ AA+ RT+W+   +    +  NI+ +   GVP   I  ++   P +VM+K        
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KTVKELGVEPKDGMFVYAV-SVAVSMSDSTWKKKINVMKSLGWSENEIFTAFKRFPRFLT 272
           K  +E+G  P+   FV A+ +++   + S W K   V +  GWSE++I  AFK+ P  + 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEEKMRDIADFCLNTAKLDPGTLISYPQFFNYSVHKRLQPRYKVLEVLKMKNLLKTK-N 332
            SE K+    ++ +N   + P ++   P    +S+ KR+ PR  V +VL    L+K   +
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IGLLFVEGERRFVEKYIVKHFDKIPNLIDIYLGNVK 342
           +  L V  E+ F+EK ++K+ +++P L+++YLG  K
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLGCTK 404

[Close]

BLAST of MELO3C011846 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 117.5 bits (293), Expect = 2.2e-26
Identity = 86/302 (28.48%), Postives = 147/302 (48.68%), Query Frame = 0


Query: 60  ENLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIG------- 119
           ++L+Q  +VI   KS+ F D+QI K +   P ++   V   L+PK  F ++IG       
Sbjct: 66  KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLG 125

Query: 120 --------IVGPLLTKEMLGS-----------DKKVTAAICRTSWLLTS-NSNGTVRSNI 179
                   +VG  L K+++ +            + +   + R  WLL S + N  +  NI
Sbjct: 126 KFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNI 185

Query: 180 DVLVSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSM 239
             L + G+  + +A ++   PR      +++   V    +LG      M V+AV    S+
Sbjct: 186 SYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSL 245

Query: 240 SDSTWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLIS 299
           S+ T+ +K+ +  + G+SE+EI    +R P  + CSE+K+    +F L    L+   L  
Sbjct: 246 SEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAK 305

Query: 300 YPQFFNYSVHKRLQPRYKVLEVLKMKNLL-----KTKNIGLLFVEGERRFVEKYIVKHFD 330
            P   +Y++ KR+ PR KVL++L+ K LL     K KN+  +    E  F+EKY+V+  D
Sbjct: 306 RPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGD 365

[Close]

BLAST of MELO3C011846 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 117.1 bits (292), Expect = 2.9e-26
Identity = 80/340 (23.53%), Postives = 151/340 (44.41%), Query Frame = 0


Query: 27  PLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEENLQQYGAVIGFFKSHGFEDSQIAKLV 86
           P     T+ +L +SCGLS  S  S  R ++    + ++  +V+  FK HGF + QI  ++
Sbjct: 52  PCLESFTVSYLVDSCGLSLESAKSNSRFVKL--VSSKKPDSVLALFKDHGFTNDQITSVI 111

Query: 87  SRKPSILHSTVSTNLKPKFEFLQEIGI----------VGPLL---------------TKE 146
              P +L  +    + PK  F   IG             P +                K 
Sbjct: 112 KSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKS 171

Query: 147 MLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVLVSEGVPSTNIAQIIALNPRSVMRKVD 206
           +L  ++ V   + R     +      V   + +    GVP  +I  ++  +P +   +  
Sbjct: 172 ILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRER 231

Query: 207 RMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDSTWKKKINVMKSLGWSENEIFTAFKRF 266
           R    +  V   G +PK   FV+A+      S+S  ++K  + +  GWS+ +   A  RF
Sbjct: 232 RFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRF 291

Query: 267 PRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQFFNYSVHKRLQPRYKVLEVLKMKNLL 326
           P  +T S+EK+    ++ +N   L    +++ P   + S+ KR++PR +V+ +L  K L+
Sbjct: 292 PNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLV 351

Query: 327 KTKNIGLLFV--EGERRFVEKYIVKHFDKIPNLIDIYLGN 340
           K ++I    +       F++K+++K+ D++P L+  +  N
Sbjct: 352 KKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of MELO3C011846 vs. TAIR 10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 113.2 bits (282), Expect = 4.1e-25
Identity = 97/388 (25.00%), Postives = 174/388 (44.85%), Query Frame = 0


Query: 13  IQKRFLNTVSTSTLPLASVS----------TIQFLTNSCGLSSGSPISRGRKLQFDEENL 72
           +Q  F+ + S S+   A VS          T+ +L +S GLS     S  RK+ F+++  
Sbjct: 24  VQNAFVLSNSFSSARAADVSIRDGRKGKNFTVSYLVDSLGLSKKLAESISRKVSFEDK-- 83

Query: 73  QQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTK-- 132
               +V+  F+S+GF DSQI+ +++  P +L +     L  K + LQ  G     +T+  
Sbjct: 84  VNPDSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIV 143

Query: 133 ----EMLGSD---------KKVTAAICRTSWLLTSNSNGTVRSNIDVLVSEGVPSTNIAQ 192
                +LG           K +  A   +S+ L   S G    N+  L   G+PS  +  
Sbjct: 144 STVPRILGKKSITVYYDAVKDIIVADTSSSYELPQGSQGNKIRNVSALRELGMPSRLLLP 203

Query: 193 IIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDSTWKKKINVMKSL 252
           ++    + V  K +    ++K V E+G +P    FV A+ +   MS+ T ++K+ V +SL
Sbjct: 204 LLVSKSQPVCGK-ENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSL 263

Query: 253 GWSENEIFTAFKRFPRFLTCSEEKMRDIA------------------------------- 312
           G++ ++++  FK+ P  L  S++K+   A                               
Sbjct: 264 GFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESV 323

Query: 313 ----DFCLNTAKLDPGTLISYPQFFNYSVHKRLQPRYKVLEVLKMKNLLKTKN----IGL 337
               +F +   K     L+ +PQ F YS+ KR+ PR  +LE L  K LL+  +    +  
Sbjct: 324 KKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSS 383

[Close]

BLAST of MELO3C011846 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 110.5 bits (275), Expect = 2.7e-24
Identity = 90/365 (24.66%), Postives = 166/365 (45.48%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPISRGRKLQFDEENLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSI 92
           T+ +L +S GL++    S  RK+ F+++N     +V+    SHGF  SQI+ ++   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LHSTVSTNLKPKFEFLQEIGIVGPLLTK------EMLGSDKKVTAAI------------- 152
           L +    +L PK +FLQ  G     +T+      E+LG     T ++             
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 CRTSWLLTSNSNGTVRS---NIDVLVSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTV 212
            +   L  S   G + +   N+ VL   G+P   +  ++  + + V  K ++    +K V
Sbjct: 174 SKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFEETLKKV 233

Query: 213 KELGVEPKDGMFVYAVSVAVSMSDSTWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEE 272
            E+G +P    FV A+ V   M++ T ++K+++ KSLG+   +++++FK++P  L  SE+
Sbjct: 234 VEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEK 293

Query: 273 KMRDI-----------------------------------ADFCLNTAKLDPGTLISYPQ 332
           KM D                                     +F +         ++S P 
Sbjct: 294 KMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPA 353

Query: 333 FFNYSVHKRLQPRYKVLEVLKMKNLLKTK--NIGLLFVEGERRFVEKYIVKHFDK--IPN 337
            F YS+ KR+ PR  V++ L  K L++ +  +I  + +  ++ F+ +Y+  H DK  +  
Sbjct: 354 VFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTE 413

The following BLAST results are available for this feature:

BLAST of MELO3C011846 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446012.1	1.5e-186	93.30	PREDICTED: transcription termination factor MTERF5, chloroplastic-like isoform X...	[more]
KAA0034175.1	3.2e-152	91.72	transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15744.1 t...	[more]
KAA0034158.1	8.6e-150	76.08	transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15761.1 t...	[more]
XP_004135534.3	1.1e-141	70.24	transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus] >X...	[more]
KAA0034139.1	7.3e-141	72.46	transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15780.1 t...	[more]

BLAST of MELO3C011846 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	1.0e-07	23.55	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9C6A1	1.6e-05	20.37	Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q84X53	1.3e-04	24.57	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
F4IHL3	1.3e-04	21.93	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of MELO3C011846 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BEV9	7.3e-187	93.30	transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumi...	[more]
A0A5A7SY90	1.5e-152	91.72	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SU45	4.2e-150	76.08	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CWN7	3.5e-141	72.46	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CWA2	1.4e-137	70.24	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of MELO3C011846 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	1.1e-38	29.46	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.2e-26	28.48	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	2.9e-26	23.53	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	4.1e-25	25.00	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	2.7e-24	24.66	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 83..114 e-value: 1.3E-4 score: 31.4 coord: 166..196 e-value: 150.0 score: 10.3 coord: 267..298 e-value: 0.053 score: 22.7 coord: 200..230 e-value: 110.0 score: 11.5 coord: 235..266 e-value: 18.0 score: 14.2 coord: 130..161 e-value: 450.0 score: 6.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 144..298 e-value: 2.5E-22 score: 79.2 coord: 70..196 e-value: 1.5E-12 score: 47.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 7..120 coord: 120..340
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 120..328 e-value: 8.1E-40 score: 138.6 coord: 54..119 e-value: 3.9E-11 score: 44.6
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 7..120 coord: 120..340

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011846.1	MELO3C011846.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding