MELO3C027772 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027772
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr08: 28045744 .. 28046757 (-)
RNA-Seq Expression	MELO3C027772
Synteny	MELO3C027772

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGAAAATGTTTGTTTTCTATGTCCATAGCCATTATGTCATATCGACCATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAATAACATCGCGGGAGGGTCATCATCTATGGGCGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTAACTTACAAATATTTCATGTTCTTTTTTCTAACTTTATATGTTATTGTCTATTTATTGAGCAGAGTCTTCTTCTCAACAAACGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGTCTTAAGTGGACGGACGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCCAGGTAATTAAATGCACTACACATTTATATATGATTCCATTTGAAACATATCTAACTTTAGCCAATCTAATGTGTTATGTTTGTAATGTGCAGCGATTCTTTGTGCTTGATTTCAATGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAAACATTTCAAAAAGTATTTGTCATGATTAATTATGATAACAAGTTTTTATATGTATAAGAAATAAACAATATAATTGTTTTAATGCAGGAGCAATCACGGACAAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGACAGCATGAGCTCGCTGAAAGAAGAGGGCAGCCGGTCGATCGTGTGGAATTGTTACGGGAAACACACGTTCGAGCTGGGACATTCGTGTCGCAAGCCGCCGAGGATGCGCATGTAAGTTATACCCTTATTAATTATCCACTTTTATTATATATTTTTGCGCGTTACCTAACATAATT

mRNA sequence

ATTGAAAATGTTTGTTTTCTATGTCCATAGCCATTATGTCATATCGACCATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAATAACATCGCGGGAGGGTCATCATCTATGGGCGACAATACGGAGTCTTCTTCTCAACAAACGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCGATAGGCGTGAGCAATCACGGACAAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGACAGCATGAGCTCGCTGAAAGAAGAGGGCAGCCGGTCGATCGTGTGGAATTGTTACGGGAAACACACGTTCGAGCTGGGACATTCGTGTCGCAAGCCGCCGAGGATGCGCATGTAAGTTATACCCTTATTAATTATCCACTTTTATTATATATTTTTGCGCGTTACCTAACATAATT

Coding sequence (CDS)

ATGTCCATAGCCATTATGTCATATCGACCATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAATAACATCGCGGGAGGGTCATCATCTATGGGCGACAATACGGAGTCTTCTTCTCAACAAACGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCGATAGGCGTGAGCAATCACGGACAAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGACAGCATGAGCTCGCTGAAAGAAGAGGGCAGCCGGTCGATCGTGTGGAATTGTTACGGGAAACACACGTTCGAGCTGGGACATTCGTGTCGCAAGCCGCCGAGGATGCGCATGTAAGTTATACCCTTATTAATTATCCACTTTTATTATATATTTTTGCGCGTTACCTAACATAA

Protein sequence

MSIAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSMGDNTESSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRDRREQSRTNKAARQKQPYNHSSGSKSFLQRQHELAERRGQPVDRVELLRETHVRAGTFVSQAAEDAHVSYTLINYPLLLYIFARYLT

Homology

[Close]

BLAST of MELO3C027772 vs. NCBI nr
Match: TYK22506.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 247.3 bits (630), Expect = 1.0e-61
Identity = 152/263 (57.79%), Postives = 157/263 (59.70%), Query Frame = 0


Query: 2   SIAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSMGDNTESSSQQTTPTPRRRAQSRL 61
           ++AIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSS+GDNTESSSQQTTPTPRRRAQSRL
Sbjct: 142 TLAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRL 201

Query: 62  LELERHVAINGRIPMTIAPGAEKPISPHAVR----------------------------- 121
           LELERHVAINGRIPMTIAPGAEKPISPHAVR                             
Sbjct: 202 LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIE 261

Query: 122 ---------------DR------------------------------------------- 160
                          D+                                           
Sbjct: 262 VVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNALV 321

[Close]

BLAST of MELO3C027772 vs. NCBI nr
Match: KAA0057011.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 247.3 bits (630), Expect = 1.0e-61
Identity = 142/212 (66.98%), Postives = 150/212 (70.75%), Query Frame = 0


Query: 2   SIAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSMGDNTESSSQQTTPTPRRRAQSRL 61
           ++AIMSYR SNFMET+DMFLQFEDDLDNNIAGGSSS+GDNTESSSQQ TPTPRRRAQSRL
Sbjct: 153 TLAIMSYRQSNFMETNDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQATPTPRRRAQSRL 212

Query: 62  LELERHVAINGRIPMTIAPGAEKPISPHAVR----------------------------- 121
           LELERHVAINGRIPMTIAPGAEKPISPH VR                             
Sbjct: 213 LELERHVAINGRIPMTIAPGAEKPISPHVVRFSQAIGVCVRKTFPVRCLKFVEHQMLTTF 272

Query: 122 -------------------------DRREQSRTNKAARQKQPYNHSSGSKSFLQRQHELA 160
                                    +  EQSRTNKAARQKQPYNHSSGSKSFLQRQ+ELA
Sbjct: 273 KEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSSGSKSFLQRQYELA 332

[Close]

BLAST of MELO3C027772 vs. NCBI nr
Match: TYK10126.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.9e-61
Identity = 151/262 (57.63%), Postives = 156/262 (59.54%), Query Frame = 0


Query: 3   IAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSMGDNTESSSQQTTPTPRRRAQSRLL 62
           ++IMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSS+GDNTESSSQQTTPTPRRRAQSRLL
Sbjct: 143 LSIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLL 202

Query: 63  ELERHVAINGRIPMTIAPGAEKPISPHAVR------------------------------ 122
           ELERHVAINGRIPMTIAPGAEKPISPHAVR                              
Sbjct: 203 ELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEV 262

Query: 123 --------------DR-------------------------------------------- 160
                         D+                                            
Sbjct: 263 VKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNALVG 322

[Close]

BLAST of MELO3C027772 vs. NCBI nr
Match: KAA0044722.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.9e-61
Identity = 151/263 (57.41%), Postives = 156/263 (59.32%), Query Frame = 0


Query: 2   SIAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSMGDNTESSSQQTTPTPRRRAQSRL 61
           ++AIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSS+GDNTESSSQQTTPTPRRRAQSRL
Sbjct: 85  TLAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRL 144

Query: 62  LELERHVAINGRIPMTIAPGAEKPISPHAVR----------------------------- 121
           LELERHVAINGRIPMTI PGAEKPISPHAVR                             
Sbjct: 145 LELERHVAINGRIPMTIVPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIE 204

Query: 122 ---------------DR------------------------------------------- 160
                          D+                                           
Sbjct: 205 VVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRADCHTHFKKYSDPEEARANPPNALV 264

[Close]

BLAST of MELO3C027772 vs. NCBI nr
Match: TYK17218.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.9e-61
Identity = 151/262 (57.63%), Postives = 156/262 (59.54%), Query Frame = 0


Query: 3   IAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSMGDNTESSSQQTTPTPRRRAQSRLL 62
           ++IMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSS+GDNTESSSQQTTPTPRRRAQSRLL
Sbjct: 142 LSIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLL 201

Query: 63  ELERHVAINGRIPMTIAPGAEKPISPHAVR------------------------------ 122
           ELERHVAINGRIPMTIAPGAEKPISPHAVR                              
Sbjct: 202 ELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEV 261

Query: 123 --------------DR-------------------------------------------- 160
                         D+                                            
Sbjct: 262 VKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNALVG 321

[Close]

BLAST of MELO3C027772 vs. ExPASy TrEMBL
Match: A0A5D3DFY2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00030 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.9e-62
Identity = 152/263 (57.79%), Postives = 157/263 (59.70%), Query Frame = 0


Query: 2   SIAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSMGDNTESSSQQTTPTPRRRAQSRL 61
           ++AIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSS+GDNTESSSQQTTPTPRRRAQSRL
Sbjct: 142 TLAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRL 201

Query: 62  LELERHVAINGRIPMTIAPGAEKPISPHAVR----------------------------- 121
           LELERHVAINGRIPMTIAPGAEKPISPHAVR                             
Sbjct: 202 LELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIE 261

Query: 122 ---------------DR------------------------------------------- 160
                          D+                                           
Sbjct: 262 VVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNALV 321

[Close]

BLAST of MELO3C027772 vs. ExPASy TrEMBL
Match: A0A5A7UU28 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G001930 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.9e-62
Identity = 142/212 (66.98%), Postives = 150/212 (70.75%), Query Frame = 0


Query: 2   SIAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSMGDNTESSSQQTTPTPRRRAQSRL 61
           ++AIMSYR SNFMET+DMFLQFEDDLDNNIAGGSSS+GDNTESSSQQ TPTPRRRAQSRL
Sbjct: 153 TLAIMSYRQSNFMETNDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQATPTPRRRAQSRL 212

Query: 62  LELERHVAINGRIPMTIAPGAEKPISPHAVR----------------------------- 121
           LELERHVAINGRIPMTIAPGAEKPISPH VR                             
Sbjct: 213 LELERHVAINGRIPMTIAPGAEKPISPHVVRFSQAIGVCVRKTFPVRCLKFVEHQMLTTF 272

Query: 122 -------------------------DRREQSRTNKAARQKQPYNHSSGSKSFLQRQHELA 160
                                    +  EQSRTNKAARQKQPYNHSSGSKSFLQRQ+ELA
Sbjct: 273 KEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSSGSKSFLQRQYELA 332

[Close]

BLAST of MELO3C027772 vs. ExPASy TrEMBL
Match: A0A5D3CI90 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002690 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.4e-61
Identity = 151/262 (57.63%), Postives = 156/262 (59.54%), Query Frame = 0


Query: 3   IAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSMGDNTESSSQQTTPTPRRRAQSRLL 62
           ++IMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSS+GDNTESSSQQTTPTPRRRAQSRLL
Sbjct: 143 LSIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLL 202

Query: 63  ELERHVAINGRIPMTIAPGAEKPISPHAVR------------------------------ 122
           ELERHVAINGRIPMTIAPGAEKPISPHAVR                              
Sbjct: 203 ELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEV 262

Query: 123 --------------DR-------------------------------------------- 160
                         D+                                            
Sbjct: 263 VKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNALVG 322

[Close]

BLAST of MELO3C027772 vs. ExPASy TrEMBL
Match: A0A5D3D141 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00680 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.4e-61
Identity = 151/262 (57.63%), Postives = 156/262 (59.54%), Query Frame = 0


Query: 3   IAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSMGDNTESSSQQTTPTPRRRAQSRLL 62
           ++IMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSS+GDNTESSSQQTTPTPRRRAQSRLL
Sbjct: 142 LSIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRLL 201

Query: 63  ELERHVAINGRIPMTIAPGAEKPISPHAVR------------------------------ 122
           ELERHVAINGRIPMTIAPGAEKPISPHAVR                              
Sbjct: 202 ELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEV 261

Query: 123 --------------DR-------------------------------------------- 160
                         D+                                            
Sbjct: 262 VKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNALVG 321

[Close]

BLAST of MELO3C027772 vs. ExPASy TrEMBL
Match: A0A5A7TN27 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00060 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.4e-61
Identity = 151/263 (57.41%), Postives = 156/263 (59.32%), Query Frame = 0


Query: 2   SIAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSMGDNTESSSQQTTPTPRRRAQSRL 61
           ++AIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSS+GDNTESSSQQTTPTPRRRAQSRL
Sbjct: 85  TLAIMSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTESSSQQTTPTPRRRAQSRL 144

Query: 62  LELERHVAINGRIPMTIAPGAEKPISPHAVR----------------------------- 121
           LELERHVAINGRIPMTI PGAEKPISPHAVR                             
Sbjct: 145 LELERHVAINGRIPMTIVPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIE 204

Query: 122 ---------------DR------------------------------------------- 160
                          D+                                           
Sbjct: 205 VVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRADCHTHFKKYSDPEEARANPPNALV 264

The following BLAST results are available for this feature:

BLAST of MELO3C027772 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK22506.1	1.0e-61	57.79	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0057011.1	1.0e-61	66.98	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK10126.1	2.9e-61	57.63	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0044722.1	2.9e-61	57.41	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK17218.1	2.9e-61	57.63	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C027772 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C027772 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DFY2	4.9e-62	57.79	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7UU28	4.9e-62	66.98	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3CI90	1.4e-61	57.63	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3D141	1.4e-61	57.63	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7TN27	1.4e-61	57.41	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of MELO3C027772 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004252	Probable transposase, Ptta/En/Spm, plant	PFAM	PF03004	Transposase_24	coord: 95..162 e-value: 7.0E-15 score: 55.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027772.1	MELO3C027772.1	mRNA