MELO3C032790 (gene) Melon (DHL92) v4

Overview
NameMELO3C032790
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr07: 19539788 .. 19541085 (+)
RNA-Seq ExpressionMELO3C032790
SyntenyMELO3C032790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGGACATGTTTGGAGCCAGCTGAGGCAGAAGTGAGTACGAGCCGCTTTAACTTCAGGCTCAACGATATAGAGTTAAAGTTGGACCGTACGGACTCCAAATTGGATCGCATGGAGTCCTTTAAGTTCGAATTATTAATCATAAAGGAGTTGCTGACGACCTTAATTGCGGTATGTTTTTTAATATTGCTTTTTCCTATTGTTTAATTTAATTGATTAATTAATGTTTAATGTAATTTTCTATTTCTTGAAGAGTGTGTCTCATAATCCTCCATCAACAACTAGGGACACCAACATTGACAAGGACCACGAAGAAGGAGGTGGTGAGGATAGGGGTACAAATGAGAACCCCGACGTACACATCATCGATCCCACTGTGGTCCTAGACGTTGATATCTGAAAAACCAAGAAGAAGAGTCGACAAGCGCAACGATAGACACATCAGAGGTCTCTATTGAAAATGTCGTTGTGCCCATGGATTGTAGCGATATTGAAGATGGTGTGTCACTTCTTCCAATTCTTCCATCTGACAAGCTACAATTCGAGGAGTTACATTTCAACATACAAAGCCTCACCTCCTCTACAACGATTGAACCATCCGAAGAGCTAAAAAAGGATGAGGTATTTAAAATTATTTTAGGGTTACCTTGTAGGGTTTAGGGCTTAGGGTTTATGTTTTATGGTATAGTTACAGAATTAAATTTTGATGTATTGAAGGACAAGGAAACACCTTTACCCTAACCTAAGAGGAAGAACCCGATCAAATTCCCTCCCCCTGCTTGATGATGCAAAGAAACATAAGGAACCGATTGATGATTCCTTGTAAATAGTATCGATTCTAGAAGTCATTAAAAGGGTTGAACCGACATACGACCCCCTTTGGCTGGTTAATGTGGATGTGTGCAAGGTGTACTTGTCATGGAGGGAAAATCCAAGGACAAAGCATGAGGAGCGAACTGTTGTCTACTCCTTTCGGAAAAAGGATTTCTTCCAAACACTCAAGAAGAACACTTGTGTCTTCGGAGATGTAAGTTTGGGGTTAAGACTTAATTTTCTTTTTATTTAAATCATGAGGAGCAATTTACTTGTCCTACACGTTCAACAGAAGATGCACTCGAAAGCATATTTGTGCAAATGCGAATTTACGGTATTAGACACATCATTCATGGTTAGTTTTTGCACTTGGCATTTATATTGTCTTCATTTGATTAGTGCGACTTGTTTATATTTTTGTCAGTGTTTTGTAAGGATTCAATTCAACAAAATACAACCTTCGTTGAATGTCTCGATGACGAATGA

mRNA sequence

CTTGGACATGTTTGGAGCCAGCTGAGGCAGAAGTGAGTACGAGCCGCTTTAACTTCAGGCTCAACGATATAGAGTTAAAGTTGGACCGTACGGACTCCAAATTGGATCGCATGGAGTCCTTTAAGTTCGAATTATTAATCATAAAGGAGTTGCTGACGACCTTAATTGCGAGTGTGTCTCATAATCCTCCATCAACAACTAGGGACACCAACATTGACAAGGACCACGAAGAAGGAGGTGGTGAGGATAGGGGTACAAATGAGAACCCCGACGTACACATCATCGATCCCACTGTGGTCCTAGACGTTGATATCTGAAAAACCAAGAAGAAGAGTCGACAAGCGCAACGATAGACACATCAGAGGTCTCTATTGAAAATGTCGTTGTGCCCATGGATTGTAGCGATATTGAAGATGGTGTGTCACTTCTTCCAATTCTTCCATCTGACAAGCTACAATTCGAGGAGTTACATTTCAACATACAAAGCCTCACCTCCTCTACAACGATTGAACCATCCGAAGAGCTAAAAAAGGATGAGGTGTACTTGTCATGGAGGGAAAATCCAAGGACAAAGCATGAGGAGCGAACTGTTGTCTACTCCTTTCGGAAAAAGGATTTCTTCCAAACACTCAAGAAGAACACTTGTGTCTTCGGAGATGATTCAATTCAACAAAATACAACCTTCGTTGAATGTCTCGATGACGAATGA

Coding sequence (CDS)

ATGGATTGTAGCGATATTGAAGATGGTGTGTCACTTCTTCCAATTCTTCCATCTGACAAGCTACAATTCGAGGAGTTACATTTCAACATACAAAGCCTCACCTCCTCTACAACGATTGAACCATCCGAAGAGCTAAAAAAGGATGAGGTGTACTTGTCATGGAGGGAAAATCCAAGGACAAAGCATGAGGAGCGAACTGTTGTCTACTCCTTTCGGAAAAAGGATTTCTTCCAAACACTCAAGAAGAACACTTGTGTCTTCGGAGATGATTCAATTCAACAAAATACAACCTTCGTTGAATGTCTCGATGACGAATGA

Protein sequence

MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKDEVYLSWRENPRTKHEERTVVYSFRKKDFFQTLKKNTCVFGDDSIQQNTTFVECLDDE
Homology
BLAST of MELO3C032790 vs. NCBI nr
Match: TYK16334.1 (hypothetical protein E5676_scaffold21G001160 [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 2.3e-42
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0

Query: 1   MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKDEVYLSWRENPRT 60
           MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKDEVYLSWRENPRT
Sbjct: 118 MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKDEVYLSWRENPRT 177

Query: 61  KHEERTVVYSFRKKDFFQTLKKNTCVFGDDSIQ 94
           KHEERTVVYSFRKKDFFQTLKKNTCVFGD  ++
Sbjct: 178 KHEERTVVYSFRKKDFFQTLKKNTCVFGDSVVR 210

BLAST of MELO3C032790 vs. NCBI nr
Match: KAA0063012.1 (hypothetical protein E6C27_scaffold468G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 176.8 bits (447), Expect = 9.8e-41
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0

Query: 1   MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKDEVYLSWRENPRT 60
           MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTI+PS+ELKKDEVYLSWRENPR 
Sbjct: 158 MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIKPSKELKKDEVYLSWRENPRM 217

Query: 61  KHEERTVVYSFRKKDFFQTLKKNTCVFGDDSIQ 94
           KHEERTVVYSFRKKDFFQTLKKNTCVFGD  ++
Sbjct: 218 KHEERTVVYSFRKKDFFQTLKKNTCVFGDSVVR 250

BLAST of MELO3C032790 vs. NCBI nr
Match: KAA0061244.1 (hypothetical protein E6C27_scaffold455G00800 [Cucumis melo var. makuwa] >TYK09373.1 hypothetical protein E5676_scaffold5463G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 2.2e-16
Identity = 55/88 (62.50%), Postives = 63/88 (71.59%), Query Frame = 0

Query: 15  ILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKDEV------------YLSWRENPRTKH 74
           ILPSD+LQ EE+ FNIQSLTS+T IEPS  L KD+             YLSWR N +TKH
Sbjct: 40  ILPSDELQAEEVRFNIQSLTSTTLIEPS--LDKDKYKKAFPPRDMWKEYLSWRGNSKTKH 99

Query: 75  EERTVVYSFRKKDFFQTLKKNTCVFGDD 91
           EERTVVYSF K DFF+TL+KNT V GD+
Sbjct: 100 EERTVVYSFWKNDFFKTLEKNTWVVGDN 125

BLAST of MELO3C032790 vs. NCBI nr
Match: KAA0036741.1 (hypothetical protein E6C27_scaffold20G00180 [Cucumis melo var. makuwa] >TYJ95808.1 hypothetical protein E5676_scaffold110G00910 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-06
Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 0

Query: 1   MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPS 43
           +DCS++EDG+   PI+PSD+LQFEE  FNIQSLTSST I+PS
Sbjct: 146 IDCSNVEDGMPPFPIIPSDELQFEEFCFNIQSLTSSTMIKPS 187

BLAST of MELO3C032790 vs. NCBI nr
Match: KAA0038039.1 (hypothetical protein E6C27_scaffold36G002390 [Cucumis melo var. makuwa] >TYK20563.1 hypothetical protein E5676_scaffold237G001530 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-05
Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 0

Query: 1   MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKD 49
           M+CSD+EDGVS   ILP DKLQ +E  FNIQSLTSST IEP  ++  D
Sbjct: 110 MNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEPLLDMDTD 157

BLAST of MELO3C032790 vs. ExPASy TrEMBL
Match: A0A5D3CZE6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001160 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0

Query: 1   MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKDEVYLSWRENPRT 60
           MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKDEVYLSWRENPRT
Sbjct: 118 MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKDEVYLSWRENPRT 177

Query: 61  KHEERTVVYSFRKKDFFQTLKKNTCVFGDDSIQ 94
           KHEERTVVYSFRKKDFFQTLKKNTCVFGD  ++
Sbjct: 178 KHEERTVVYSFRKKDFFQTLKKNTCVFGDSVVR 210

BLAST of MELO3C032790 vs. ExPASy TrEMBL
Match: A0A5A7V440 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001140 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.8e-41
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0

Query: 1   MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKDEVYLSWRENPRT 60
           MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTI+PS+ELKKDEVYLSWRENPR 
Sbjct: 158 MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIKPSKELKKDEVYLSWRENPRM 217

Query: 61  KHEERTVVYSFRKKDFFQTLKKNTCVFGDDSIQ 94
           KHEERTVVYSFRKKDFFQTLKKNTCVFGD  ++
Sbjct: 218 KHEERTVVYSFRKKDFFQTLKKNTCVFGDSVVR 250

BLAST of MELO3C032790 vs. ExPASy TrEMBL
Match: A0A5A7V1R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5463G00040 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-16
Identity = 55/88 (62.50%), Postives = 63/88 (71.59%), Query Frame = 0

Query: 15  ILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKDEV------------YLSWRENPRTKH 74
           ILPSD+LQ EE+ FNIQSLTS+T IEPS  L KD+             YLSWR N +TKH
Sbjct: 40  ILPSDELQAEEVRFNIQSLTSTTLIEPS--LDKDKYKKAFPPRDMWKEYLSWRGNSKTKH 99

Query: 75  EERTVVYSFRKKDFFQTLKKNTCVFGDD 91
           EERTVVYSF K DFF+TL+KNT V GD+
Sbjct: 100 EERTVVYSFWKNDFFKTLEKNTWVVGDN 125

BLAST of MELO3C032790 vs. ExPASy TrEMBL
Match: A0A5D3BBS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00910 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.7e-07
Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 0

Query: 1   MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPS 43
           +DCS++EDG+   PI+PSD+LQFEE  FNIQSLTSST I+PS
Sbjct: 146 IDCSNVEDGMPPFPIIPSDELQFEEFCFNIQSLTSSTMIKPS 187

BLAST of MELO3C032790 vs. ExPASy TrEMBL
Match: A0A5D3DAH4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001530 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.5e-06
Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 0

Query: 1   MDCSDIEDGVSLLPILPSDKLQFEELHFNIQSLTSSTTIEPSEELKKD 49
           M+CSD+EDGVS   ILP DKLQ +E  FNIQSLTSST IEP  ++  D
Sbjct: 110 MNCSDVEDGVSPYSILPFDKLQTKEFCFNIQSLTSSTMIEPLLDMDTD 157

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK16334.12.3e-4295.70hypothetical protein E5676_scaffold21G001160 [Cucumis melo var. makuwa][more]
KAA0063012.19.8e-4192.47hypothetical protein E6C27_scaffold468G001140 [Cucumis melo var. makuwa][more]
KAA0061244.12.2e-1662.50hypothetical protein E6C27_scaffold455G00800 [Cucumis melo var. makuwa] >TYK0937... [more]
KAA0036741.11.6e-0669.05hypothetical protein E6C27_scaffold20G00180 [Cucumis melo var. makuwa] >TYJ95808... [more]
KAA0038039.11.3e-0564.58hypothetical protein E6C27_scaffold36G002390 [Cucumis melo var. makuwa] >TYK2056... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CZE61.1e-4295.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V4404.8e-4192.47Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V1R01.1e-1662.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BBS27.7e-0769.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DAH46.5e-0664.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032790.1MELO3C032790.1mRNA