Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCCACTGGTTGCGAATCGTTGGCTAGAAGTCCTGAGAACTTGGTAGATGTAATATCAGGAAAACAGGTTCATCTCTTTCCATTCAATTGGTTTCTATCTTGTAAACAATTTTATGGATATGCATTCTTATTCTACAGGACCTTACATTGGGTGAGATTTCAAGAGAGTTCTTTCTAACGGGCATTGAGATTCCAGAATGGTTCAGTTATAAGTCTACTACAAATTCTGTGACTGCTAGCATTCGTCACTATCCAGATATGGAAAGGACTTTGGCTGCCTGTGTTAGTTTCACAGTGAATGGAGATTCGTCTACAAGGGGAGCCCTAATTTCATGCAATATATTCATCTGCAATCAACTCTATTGTTCTTTTTCAAGATCATTTCTTCCATCAAAATCAGAGTATATGTGGTTAGTAACAACTTCTCTAGCTCGGGAATCCATGGAGGTGCAGGATTGGAATAAAGTTTTGATCTGGTTTGAAGCACAAGATGAGGTGAATGTAACTATGAGAAGCTGTGGTGTCCATGTCACAGAAGAGCTCCATGGGTTACAAACGGATCTCAACTGGCCGGTGGTAACTTTTGCTGATTTTTATCAACCGGAGAAATTGCCAGATCTGTAA
mRNA sequence
ATGGATGCCACTGGTTGCGAATCGTTGGCTAGAAGTCCTGAGAACTTGGTAGATGTAATATCAGGAAAACAGGACCTTACATTGGGTGAGATTTCAAGAGAGTTCTTTCTAACGGGCATTGAGATTCCAGAATGGTTCAGTTATAAGTCTACTACAAATTCTGTGACTGCTAGCATTCGTCACTATCCAGATATGGAAAGGACTTTGGCTGCCTGTGTTAGTTTCACAGTGAATGGAGATTCGTCTACAAGGGGAGCCCTAATTTCATGCAATATATTCATCTGCAATCAACTCTATTGTTCTTTTTCAAGATCATTTCTTCCATCAAAATCAGAGTATATGTGGTTAGTAACAACTTCTCTAGCTCGGGAATCCATGGAGGTGCAGGATTGGAATAAAGTTTTGATCTGGTTTGAAGCACAAGATGAGGTGAATGTAACTATGAGAAGCTGTGGTGTCCATGTCACAGAAGAGCTCCATGGGTTACAAACGGATCTCAACTGGCCGGTGGTAACTTTTGCTGATTTTTATCAACCGGAGAAATTGCCAGATCTGTAA
Coding sequence (CDS)
ATGGATGCCACTGGTTGCGAATCGTTGGCTAGAAGTCCTGAGAACTTGGTAGATGTAATATCAGGAAAACAGGACCTTACATTGGGTGAGATTTCAAGAGAGTTCTTTCTAACGGGCATTGAGATTCCAGAATGGTTCAGTTATAAGTCTACTACAAATTCTGTGACTGCTAGCATTCGTCACTATCCAGATATGGAAAGGACTTTGGCTGCCTGTGTTAGTTTCACAGTGAATGGAGATTCGTCTACAAGGGGAGCCCTAATTTCATGCAATATATTCATCTGCAATCAACTCTATTGTTCTTTTTCAAGATCATTTCTTCCATCAAAATCAGAGTATATGTGGTTAGTAACAACTTCTCTAGCTCGGGAATCCATGGAGGTGCAGGATTGGAATAAAGTTTTGATCTGGTTTGAAGCACAAGATGAGGTGAATGTAACTATGAGAAGCTGTGGTGTCCATGTCACAGAAGAGCTCCATGGGTTACAAACGGATCTCAACTGGCCGGTGGTAACTTTTGCTGATTTTTATCAACCGGAGAAATTGCCAGATCTGTAA
Protein sequence
MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIRHYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTSLARESMEVQDWNKVLIWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPEKLPDL
Homology
BLAST of MELO3C004302 vs. NCBI nr
Match:
KAA0063682.1 (TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0
Query: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR
Sbjct: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
Query: 61 HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
HYPDMERTLAACVSFTVNGDSSTR ALISCNIFICN+LYCSFSRSFLPSKSEYMWLVTTS
Sbjct: 61 HYPDMERTLAACVSFTVNGDSSTRVALISCNIFICNRLYCSFSRSFLPSKSEYMWLVTTS 120
Query: 121 LARESMEVQDWNKVLIWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180
LARESMEVQDWNKVL+WFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE
Sbjct: 121 LARESMEVQDWNKVLVWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180
Query: 181 KLPDL 186
KLPDL
Sbjct: 181 KLPDL 185
BLAST of MELO3C004302 vs. NCBI nr
Match:
TYK18345.1 (TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0
Query: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR
Sbjct: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
Query: 61 HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
HYPDMERTLAACVSFTVNGDSSTR ALISCNIFICN+LYCSFSRSFLPSKSEYMWLVTTS
Sbjct: 61 HYPDMERTLAACVSFTVNGDSSTRVALISCNIFICNRLYCSFSRSFLPSKSEYMWLVTTS 120
Query: 121 LARESMEVQDWNKVLIWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180
LARESMEVQDWNKVL+WFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE
Sbjct: 121 LARESMEVQDWNKVLVWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180
Query: 181 KLPDL 186
KLPDL
Sbjct: 181 KLPDL 185
BLAST of MELO3C004302 vs. NCBI nr
Match:
XP_008455151.1 (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo])
HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 145/188 (77.13%), Postives = 162/188 (86.17%), Query Frame = 0
Query: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
MDA+GCESLAR+P+N+VD+IS KQDLTLGEISREF LTGIEIPEWFSYK+T+N VTAS R
Sbjct: 1006 MDASGCESLARNPDNIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTSNLVTASFR 1065
Query: 61 HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
HYPDMERTLAACVSF VNGDSS RGA ISC+IFIC++L+ SFSR FLPSKSEYMWLVTTS
Sbjct: 1066 HYPDMERTLAACVSFKVNGDSSKRGAQISCSIFICSKLHSSFSRPFLPSKSEYMWLVTTS 1125
Query: 121 LARESMEVQDWNKVLIWF---EAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFY 180
LA SMEV DWNKVL+WF EA EVN T+ CGVHVTEELHG+Q D+ WP+V +ADFY
Sbjct: 1126 LAWGSMEVNDWNKVLVWFEVHEAHSEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFY 1185
Query: 181 QPEKLPDL 186
Q EKL L
Sbjct: 1186 QLEKLQSL 1193
BLAST of MELO3C004302 vs. NCBI nr
Match:
XP_008455159.1 (PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis melo])
HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 145/188 (77.13%), Postives = 162/188 (86.17%), Query Frame = 0
Query: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
MDA+GCESLAR+P+N+VD+IS KQDLTLGEISREF LTGIEIPEWFSYK+T+N VTAS R
Sbjct: 819 MDASGCESLARNPDNIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTSNLVTASFR 878
Query: 61 HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
HYPDMERTLAACVSF VNGDSS RGA ISC+IFIC++L+ SFSR FLPSKSEYMWLVTTS
Sbjct: 879 HYPDMERTLAACVSFKVNGDSSKRGAQISCSIFICSKLHSSFSRPFLPSKSEYMWLVTTS 938
Query: 121 LARESMEVQDWNKVLIWF---EAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFY 180
LA SMEV DWNKVL+WF EA EVN T+ CGVHVTEELHG+Q D+ WP+V +ADFY
Sbjct: 939 LAWGSMEVNDWNKVLVWFEVHEAHSEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFY 998
Query: 181 QPEKLPDL 186
Q EKL L
Sbjct: 999 QLEKLQSL 1006
BLAST of MELO3C004302 vs. NCBI nr
Match:
XP_038877835.1 (LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida])
HSP 1 Score: 298.9 bits (764), Expect = 3.0e-77
Identity = 144/188 (76.60%), Postives = 164/188 (87.23%), Query Frame = 0
Query: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
+DA+GCESLARSP N+VD+IS KQDLTLGEISREF LT IEIPEWF YK+TTN ++AS R
Sbjct: 978 LDASGCESLARSPNNIVDIISKKQDLTLGEISREFLLTDIEIPEWFGYKTTTNLISASFR 1037
Query: 61 HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
HYPDMERTLAACV+F VNGDSS R AL+SC+IFICN+L+CSF+R FLPSKSEYMWLVTTS
Sbjct: 1038 HYPDMERTLAACVNFKVNGDSSKRVALVSCSIFICNRLHCSFTRPFLPSKSEYMWLVTTS 1097
Query: 121 LARESMEVQDWNKVLIWFEAQD---EVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFY 180
LA SMEVQDWNKVL+ FE + EVNVT+RS G+HVTEELHG+QTDL WPVV +ADFY
Sbjct: 1098 LAWGSMEVQDWNKVLVRFEVHEEHVEVNVTIRSYGIHVTEELHGMQTDLKWPVVNYADFY 1157
Query: 181 QPEKLPDL 186
Q EKL +L
Sbjct: 1158 QMEKLQNL 1165
BLAST of MELO3C004302 vs. ExPASy TrEMBL
Match:
A0A5D3D473 (TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00600 PE=4 SV=1)
HSP 1 Score: 376.7 bits (966), Expect = 5.5e-101
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0
Query: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR
Sbjct: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
Query: 61 HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
HYPDMERTLAACVSFTVNGDSSTR ALISCNIFICN+LYCSFSRSFLPSKSEYMWLVTTS
Sbjct: 61 HYPDMERTLAACVSFTVNGDSSTRVALISCNIFICNRLYCSFSRSFLPSKSEYMWLVTTS 120
Query: 121 LARESMEVQDWNKVLIWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180
LARESMEVQDWNKVL+WFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE
Sbjct: 121 LARESMEVQDWNKVLVWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180
Query: 181 KLPDL 186
KLPDL
Sbjct: 181 KLPDL 185
BLAST of MELO3C004302 vs. ExPASy TrEMBL
Match:
A0A5A7V617 (TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G002010 PE=4 SV=1)
HSP 1 Score: 376.7 bits (966), Expect = 5.5e-101
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0
Query: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR
Sbjct: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
Query: 61 HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
HYPDMERTLAACVSFTVNGDSSTR ALISCNIFICN+LYCSFSRSFLPSKSEYMWLVTTS
Sbjct: 61 HYPDMERTLAACVSFTVNGDSSTRVALISCNIFICNRLYCSFSRSFLPSKSEYMWLVTTS 120
Query: 121 LARESMEVQDWNKVLIWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180
LARESMEVQDWNKVL+WFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE
Sbjct: 121 LARESMEVQDWNKVLVWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180
Query: 181 KLPDL 186
KLPDL
Sbjct: 181 KLPDL 185
BLAST of MELO3C004302 vs. ExPASy TrEMBL
Match:
A0A1S3C088 (TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495388 PE=4 SV=1)
HSP 1 Score: 300.1 bits (767), Expect = 6.6e-78
Identity = 145/188 (77.13%), Postives = 162/188 (86.17%), Query Frame = 0
Query: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
MDA+GCESLAR+P+N+VD+IS KQDLTLGEISREF LTGIEIPEWFSYK+T+N VTAS R
Sbjct: 1006 MDASGCESLARNPDNIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTSNLVTASFR 1065
Query: 61 HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
HYPDMERTLAACVSF VNGDSS RGA ISC+IFIC++L+ SFSR FLPSKSEYMWLVTTS
Sbjct: 1066 HYPDMERTLAACVSFKVNGDSSKRGAQISCSIFICSKLHSSFSRPFLPSKSEYMWLVTTS 1125
Query: 121 LARESMEVQDWNKVLIWF---EAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFY 180
LA SMEV DWNKVL+WF EA EVN T+ CGVHVTEELHG+Q D+ WP+V +ADFY
Sbjct: 1126 LAWGSMEVNDWNKVLVWFEVHEAHSEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFY 1185
Query: 181 QPEKLPDL 186
Q EKL L
Sbjct: 1186 QLEKLQSL 1193
BLAST of MELO3C004302 vs. ExPASy TrEMBL
Match:
A0A1S3C093 (TMV resistance protein N-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495388 PE=4 SV=1)
HSP 1 Score: 300.1 bits (767), Expect = 6.6e-78
Identity = 145/188 (77.13%), Postives = 162/188 (86.17%), Query Frame = 0
Query: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
MDA+GCESLAR+P+N+VD+IS KQDLTLGEISREF LTGIEIPEWFSYK+T+N VTAS R
Sbjct: 819 MDASGCESLARNPDNIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTSNLVTASFR 878
Query: 61 HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
HYPDMERTLAACVSF VNGDSS RGA ISC+IFIC++L+ SFSR FLPSKSEYMWLVTTS
Sbjct: 879 HYPDMERTLAACVSFKVNGDSSKRGAQISCSIFICSKLHSSFSRPFLPSKSEYMWLVTTS 938
Query: 121 LARESMEVQDWNKVLIWF---EAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFY 180
LA SMEV DWNKVL+WF EA EVN T+ CGVHVTEELHG+Q D+ WP+V +ADFY
Sbjct: 939 LAWGSMEVNDWNKVLVWFEVHEAHSEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFY 998
Query: 181 QPEKLPDL 186
Q EKL L
Sbjct: 999 QLEKLQSL 1006
BLAST of MELO3C004302 vs. ExPASy TrEMBL
Match:
A0A0A0LJM0 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022270 PE=4 SV=1)
HSP 1 Score: 292.7 bits (748), Expect = 1.0e-75
Identity = 142/188 (75.53%), Postives = 158/188 (84.04%), Query Frame = 0
Query: 1 MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
MDA GCESLAR P+N+VD+IS KQDLT+GEISREF LTGIEIPEWFSYK+T+N V+AS R
Sbjct: 941 MDACGCESLARIPDNIVDIISKKQDLTMGEISREFLLTGIEIPEWFSYKTTSNLVSASFR 1000
Query: 61 HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
HYPDMERTLAACVSF VNG+SS RGA ISCNIF+CN+LY S SR FLPSKSEYMWLVTTS
Sbjct: 1001 HYPDMERTLAACVSFKVNGNSSERGARISCNIFVCNRLYFSLSRPFLPSKSEYMWLVTTS 1060
Query: 121 LARESMEVQDWNKVLIWF---EAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFY 180
LA SMEV DWNKVL+WF EA EVN T+ GVHVTEELH +QTD+ WP+V +ADFY
Sbjct: 1061 LALGSMEVNDWNKVLVWFEVHEAHSEVNATITRYGVHVTEELHAIQTDVKWPMVNYADFY 1120
Query: 181 QPEKLPDL 186
Q EKL L
Sbjct: 1121 QLEKLQSL 1128
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0063682.1 | 1.1e-100 | 98.38 | TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa] | [more] |
| TYK18345.1 | 1.1e-100 | 98.38 | TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa] | [more] |
| XP_008455151.1 | 1.4e-77 | 77.13 | PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo] | [more] |
| XP_008455159.1 | 1.4e-77 | 77.13 | PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis melo] | [more] |
| XP_038877835.1 | 3.0e-77 | 76.60 | LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3D473 | 5.5e-101 | 98.38 | TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| A0A5A7V617 | 5.5e-101 | 98.38 | TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| A0A1S3C088 | 6.6e-78 | 77.13 | TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495388... | [more] |
| A0A1S3C093 | 6.6e-78 | 77.13 | TMV resistance protein N-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495388... | [more] |
| A0A0A0LJM0 | 1.0e-75 | 75.53 | TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022270 PE=4 SV... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
