MELO3C028299 (gene) Melon (DHL92) v4

Overview
NameMELO3C028299
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr05: 7504523 .. 7504795 (-)
RNA-Seq ExpressionMELO3C028299
SyntenyMELO3C028299
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTACCCCAGGACGAGAAAACTGAGTCCGGGGCATTCCCGCTCGCGTTTTCTTGGGACGAGCACCGGAAGTCCTCGAGCTCAGCCCGTTTCCTTCGCTGCAAGTGCATTTCCAGTGGTTTCTGACACCGGACGAGCGTTCGCCACTCGTTGGAAGCTTCGGCCATCTTTTGGACCGTTTTGGGTCGCACCACAGTTCTCCCTCCAACGAGCTCGCTTCCCGACCTATACCTCCGGAAAACGTGTCAGGGAGCATGCCAGGAGTGTGGGTTGA

mRNA sequence

TTTTACCCCAGGACGAGAAAACTGAGTCCGGGGCATTCCCGCTCGCGTTTTCTTGGGACGAGCACCGGAAGTCCTCGAGCTCAGACCGTTTTGGGTCGCACCACAGTTCTCCCTCCAACGAGCTCGCTTCCCGACCTATACCTCCGGAAAACGTGTCAGGGAGCATGCCAGGAGTGTGGGTTGA

Coding sequence (CDS)

TTTTACCCCAGGACGAGAAAACTGAGTCCGGGGCATTCCCGCTCGCGTTTTCTTGGGACGAGCACCGGAAGTCCTCGAGCTCAGACCGTTTTGGGTCGCACCACAGTTCTCCCTCCAACGAGCTCGCTTCCCGACCTATACCTCCGGAAAACGTGTCAGGGAGCATGCCAGGAGTGTGGGTTG

Protein sequence

FYPRTRKLSPGHSRSRFLGTSTGSPRAQTVLGRTTVLPPTSSLPDLYLRKTCQGACQECGL
Homology
BLAST of MELO3C028299 vs. NCBI nr
Match: KAA0062674.1 (uncharacterized protein E6C27_scaffold79G001940 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05
Identity = 28/32 (87.50%), Postives = 28/32 (87.50%), Query Frame = 0

Query: 30  VLGRTTVLPPTSSLPDLYLRKTCQGACQECGL 62
           VLGR  VLP TSSLPDLYLRKTCQGA QECGL
Sbjct: 444 VLGRAIVLPLTSSLPDLYLRKTCQGAWQECGL 475

BLAST of MELO3C028299 vs. NCBI nr
Match: TYK01208.1 (uncharacterized protein E5676_scaffold2044G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04
Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 0

Query: 30  VLGRTTVLPPTSSLPDLYLRKTCQGACQECGL 62
           VLGR  VLP TSSLPDLYL KTCQGA QECGL
Sbjct: 397 VLGRAIVLPLTSSLPDLYLWKTCQGAWQECGL 428

BLAST of MELO3C028299 vs. NCBI nr
Match: KAA0065855.1 (hypothetical protein E6C27_scaffold538G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 53.1 bits (126), Expect = 9.5e-04
Identity = 27/38 (71.05%), Postives = 29/38 (76.32%), Query Frame = 0

Query: 4  RTRKLSPGHSRSRFLGTSTGSPRAQTVLGRTTVLPPTS 42
          +TRKLSPGHSRSRFLGTSTGSPRAQ V    +  P  S
Sbjct: 14 KTRKLSPGHSRSRFLGTSTGSPRAQPVSFAASAFPVVS 51

BLAST of MELO3C028299 vs. NCBI nr
Match: KAA0046850.1 (hypothetical protein E6C27_scaffold19358G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 53.1 bits (126), Expect = 9.5e-04
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 1   FYPRTRKLSPGHSRSRFLGTSTGSPRAQTV 31
           FYPR RKL  GHSRSRFLGTSTGSPRA+ V
Sbjct: 188 FYPRMRKLGAGHSRSRFLGTSTGSPRAKPV 217

BLAST of MELO3C028299 vs. ExPASy TrEMBL
Match: A0A5A7V5Z6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001940 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.4e-06
Identity = 28/32 (87.50%), Postives = 28/32 (87.50%), Query Frame = 0

Query: 30  VLGRTTVLPPTSSLPDLYLRKTCQGACQECGL 62
           VLGR  VLP TSSLPDLYLRKTCQGA QECGL
Sbjct: 444 VLGRAIVLPLTSSLPDLYLRKTCQGAWQECGL 475

BLAST of MELO3C028299 vs. ExPASy TrEMBL
Match: A0A5A7V5Z6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001940 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.9e-02
Identity = 24/30 (80.00%), Postives = 24/30 (80.00%), Query Frame = 0

Query: 1  FYPRTRKLSPGHSRSRFLGTSTGSPRAQTV 31
          FY RTRKLSP HSRS FLGTST SPRA  V
Sbjct: 24 FYTRTRKLSPRHSRSHFLGTSTESPRALPV 53


HSP 2 Score: 55.8 bits (133), Expect = 7.1e-05
Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 0

Query: 30  VLGRTTVLPPTSSLPDLYLRKTCQGACQECGL 62
           VLGR  VLP TSSLPDLYL KTCQGA QECGL
Sbjct: 397 VLGRAIVLPLTSSLPDLYLWKTCQGAWQECGL 428

BLAST of MELO3C028299 vs. ExPASy TrEMBL
Match: A0A5D3BQ75 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00560 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.9e-02
Identity = 24/30 (80.00%), Postives = 24/30 (80.00%), Query Frame = 0

Query: 1  FYPRTRKLSPGHSRSRFLGTSTGSPRAQTV 31
          FY RTRKLSP HSRS FLGTST SPRA  V
Sbjct: 24 FYTRTRKLSPRHSRSHFLGTSTESPRALPV 53


HSP 2 Score: 53.1 bits (126), Expect = 4.6e-04
Identity = 27/38 (71.05%), Postives = 29/38 (76.32%), Query Frame = 0

Query: 4  RTRKLSPGHSRSRFLGTSTGSPRAQTVLGRTTVLPPTS 42
          +TRKLSPGHSRSRFLGTSTGSPRAQ V    +  P  S
Sbjct: 14 KTRKLSPGHSRSRFLGTSTGSPRAQPVSFAASAFPVVS 51

BLAST of MELO3C028299 vs. ExPASy TrEMBL
Match: A0A5A7TUM9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00010 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.6e-04
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 1   FYPRTRKLSPGHSRSRFLGTSTGSPRAQTV 31
           FYPR RKL  GHSRSRFLGTSTGSPRA+ V
Sbjct: 188 FYPRMRKLGAGHSRSRFLGTSTGSPRAKPV 217

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0062674.11.7e-0587.50uncharacterized protein E6C27_scaffold79G001940 [Cucumis melo var. makuwa][more]
TYK01208.11.5e-0484.38uncharacterized protein E5676_scaffold2044G00560 [Cucumis melo var. makuwa][more]
KAA0065855.19.5e-0471.05hypothetical protein E6C27_scaffold538G00010 [Cucumis melo var. makuwa][more]
KAA0046850.19.5e-0483.33hypothetical protein E6C27_scaffold19358G00010 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V5Z68.4e-0687.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V5Z61.9e-0280.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BQ751.9e-0280.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TUM94.6e-0483.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028299.1MELO3C028299.1mRNA