MELO3C015800.1 (mRNA) Melon (DHL92) v4

Overview
NameMELO3C015800.1
TypemRNA
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionBI1-like protein
Locationchr01: 29268085 .. 29268348 (+)
Sequence length264
RNA-Seq ExpressionMELO3C015800.1
SyntenyMELO3C015800.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACGCGCCACCGATCGCCAGAGCAAAAACGATGTGGAACCACCCCTATCGGAAGCCTGAAGCCAGAGTGGGGCCCTGTTTCCCAGTAATGCTGGAGTCGCCGCCGCAACTCCGATGGCCTTCATCCGCGAGGGTTTATTATTCCTTCATTTCCGTTCAGTTGATAGCCACCGTCGTGTCAGTTCGTCCTATAGCGACGTTCGTCGTTTGTGATAGTGAGGATTGGGCTTCTATATTTTGGTCCGAATTGCGCCCTTTATAA

mRNA sequence

ATGCACGCGCCACCGATCGCCAGAGCAAAAACGATGTGGAACCACCCCTATCGGAAGCCTGAAGCCAGAGTGGGGCCCTGTTTCCCAGTAATGCTGGAGTCGCCGCCGCAACTCCGATGGCCTTCATCCGCGAGGGTTTATTATTCCTTCATTTCCGTTCAGTTGATAGCCACCGTCGTGTCAGTTCGTCCTATAGCGACGTTCGTCGTTTGTGATAGTGAGGATTGGGCTTCTATATTTTGGTCCGAATTGCGCCCTTTATAA

Coding sequence (CDS)

ATGCACGCGCCACCGATCGCCAGAGCAAAAACGATGTGGAACCACCCCTATCGGAAGCCTGAAGCCAGAGTGGGGCCCTGTTTCCCAGTAATGCTGGAGTCGCCGCCGCAACTCCGATGGCCTTCATCCGCGAGGGTTTATTATTCCTTCATTTCCGTTCAGTTGATAGCCACCGTCGTGTCAGTTCGTCCTATAGCGACGTTCGTCGTTTGTGATAGTGAGGATTGGGCTTCTATATTTTGGTCCGAATTGCGCCCTTTATAA

Protein sequence

MHAPPIARAKTMWNHPYRKPEARVGPCFPVMLESPPQLRWPSSARVYYSFISVQLIATVVSVRPIATFVVCDSEDWASIFWSELRPL
Homology
BLAST of MELO3C015800.1 vs. NCBI nr
Match: KAA0064032.1 (BI1-like protein [Cucumis melo var. makuwa] >TYK26183.1 BI1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 173.7 bits (439), Expect = 6.9e-40
Identity = 83/87 (95.40%), Postives = 83/87 (95.40%), Query Frame = 0

Query: 1  MHAPPIARAKTMWNHPYRKPEARVGPCFPVMLESPPQLRWPSSARVYYSFISVQLIATVV 60
          MHAPPIARA TMWNHPYRKPEA VGP F VMLESPPQLRWPSSARVYYSFISVQLIATVV
Sbjct: 1  MHAPPIARANTMWNHPYRKPEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIATVV 60

Query: 61 SVRPIATFVVCDSEDWASIFWSELRPL 88
          SVRPIATFVVCDSEDWASIFWSELRPL
Sbjct: 61 SVRPIATFVVCDSEDWASIFWSELRPL 87

BLAST of MELO3C015800.1 vs. NCBI nr
Match: XP_022155831.1 (BI1-like protein isoform X2 [Momordica charantia])

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-07
Identity = 43/70 (61.43%), Postives = 47/70 (67.14%), Query Frame = 0

Query: 12 MWNHPYRK--PEARVGPCFPVMLESPPQLRWPSSARVYYSFISVQLI------ATVVSVR 71
          MW+HPYRK   EA  GP F VMLE PP LRW +  R  YS ISVQL+      ATVVSVR
Sbjct: 2  MWSHPYRKVDAEAGAGPRFLVMLE-PPHLRW-AFIRKVYSIISVQLLATIAIAATVVSVR 61

Query: 72 PIATFVVCDS 74
          PI+TF V DS
Sbjct: 62 PISTFFVRDS 69

BLAST of MELO3C015800.1 vs. NCBI nr
Match: XP_022155830.1 (BI1-like protein isoform X1 [Momordica charantia])

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-07
Identity = 43/70 (61.43%), Postives = 47/70 (67.14%), Query Frame = 0

Query: 12 MWNHPYRK--PEARVGPCFPVMLESPPQLRWPSSARVYYSFISVQLI------ATVVSVR 71
          MW+HPYRK   EA  GP F VMLE PP LRW +  R  YS ISVQL+      ATVVSVR
Sbjct: 2  MWSHPYRKVDAEAGAGPRFLVMLE-PPHLRW-AFIRKVYSIISVQLLATIAIAATVVSVR 61

Query: 72 PIATFVVCDS 74
          PI+TF V DS
Sbjct: 62 PISTFFVRDS 69

BLAST of MELO3C015800.1 vs. NCBI nr
Match: XP_002524726.1 (protein LIFEGUARD 4 [Ricinus communis] >EEF37569.1 Transmembrane BAX inhibitor motif-containing protein, putative [Ricinus communis])

HSP 1 Score: 61.6 bits (148), Expect = 3.8e-06
Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 0

Query: 12 MWNHPYRKPEARVG--PCFPVMLESPPQLRWPSSARVYYSFISVQLIAT------VVSVR 71
          MW HPYRK +   G  P +P+MLES P+LRW S  R  YS + +QL+AT      VVSVR
Sbjct: 1  MWAHPYRKSDVEAGARPLYPMMLES-PELRW-SFIRKVYSILCIQLLATIAVASVVVSVR 60

BLAST of MELO3C015800.1 vs. NCBI nr
Match: XP_002307607.1 (protein LIFEGUARD 2 [Populus trichocarpa] >KAF9854427.1 hypothetical protein H0E87_006161 [Populus deltoides] >PNT37936.1 hypothetical protein POPTR_005G214000 [Populus trichocarpa])

HSP 1 Score: 58.2 bits (139), Expect = 4.2e-05
Identity = 35/65 (53.85%), Postives = 42/65 (64.62%), Query Frame = 0

Query: 12 MWNHPYRKPEARVG--PCFPVMLESPPQLRWPSSARVYYSFISVQLI------ATVVSVR 69
          MW HPYRK +  VG  P +P+MLES PQLRW +  R  YS ++ QL+      A VVSVR
Sbjct: 1  MWTHPYRKNDVEVGARPLYPMMLES-PQLRW-AFIRKVYSILAFQLLLTIAVAAVVVSVR 60

BLAST of MELO3C015800.1 vs. ExPASy TrEMBL
Match: A0A5A7V6R5 (BI1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001100 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.3e-40
Identity = 83/87 (95.40%), Postives = 83/87 (95.40%), Query Frame = 0

Query: 1  MHAPPIARAKTMWNHPYRKPEARVGPCFPVMLESPPQLRWPSSARVYYSFISVQLIATVV 60
          MHAPPIARA TMWNHPYRKPEA VGP F VMLESPPQLRWPSSARVYYSFISVQLIATVV
Sbjct: 1  MHAPPIARANTMWNHPYRKPEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIATVV 60

Query: 61 SVRPIATFVVCDSEDWASIFWSELRPL 88
          SVRPIATFVVCDSEDWASIFWSELRPL
Sbjct: 61 SVRPIATFVVCDSEDWASIFWSELRPL 87

BLAST of MELO3C015800.1 vs. ExPASy TrEMBL
Match: A0A6J1DSW9 (BI1-like protein isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022859 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.5e-08
Identity = 43/70 (61.43%), Postives = 47/70 (67.14%), Query Frame = 0

Query: 12 MWNHPYRK--PEARVGPCFPVMLESPPQLRWPSSARVYYSFISVQLI------ATVVSVR 71
          MW+HPYRK   EA  GP F VMLE PP LRW +  R  YS ISVQL+      ATVVSVR
Sbjct: 2  MWSHPYRKVDAEAGAGPRFLVMLE-PPHLRW-AFIRKVYSIISVQLLATIAIAATVVSVR 61

Query: 72 PIATFVVCDS 74
          PI+TF V DS
Sbjct: 62 PISTFFVRDS 69

BLAST of MELO3C015800.1 vs. ExPASy TrEMBL
Match: A0A6J1DNI0 (BI1-like protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022859 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.5e-08
Identity = 43/70 (61.43%), Postives = 47/70 (67.14%), Query Frame = 0

Query: 12 MWNHPYRK--PEARVGPCFPVMLESPPQLRWPSSARVYYSFISVQLI------ATVVSVR 71
          MW+HPYRK   EA  GP F VMLE PP LRW +  R  YS ISVQL+      ATVVSVR
Sbjct: 2  MWSHPYRKVDAEAGAGPRFLVMLE-PPHLRW-AFIRKVYSIISVQLLATIAIAATVVSVR 61

Query: 72 PIATFVVCDS 74
          PI+TF V DS
Sbjct: 62 PISTFFVRDS 69

BLAST of MELO3C015800.1 vs. ExPASy TrEMBL
Match: B9SFF7 (Transmembrane BAX inhibitor motif-containing protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0646030 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-06
Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 0

Query: 12 MWNHPYRKPEARVG--PCFPVMLESPPQLRWPSSARVYYSFISVQLIAT------VVSVR 71
          MW HPYRK +   G  P +P+MLES P+LRW S  R  YS + +QL+AT      VVSVR
Sbjct: 1  MWAHPYRKSDVEAGARPLYPMMLES-PELRW-SFIRKVYSILCIQLLATIAVASVVVSVR 60

BLAST of MELO3C015800.1 vs. ExPASy TrEMBL
Match: B9H8C7 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G214000 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.0e-05
Identity = 35/65 (53.85%), Postives = 42/65 (64.62%), Query Frame = 0

Query: 12 MWNHPYRKPEARVG--PCFPVMLESPPQLRWPSSARVYYSFISVQLI------ATVVSVR 69
          MW HPYRK +  VG  P +P+MLES PQLRW +  R  YS ++ QL+      A VVSVR
Sbjct: 1  MWTHPYRKNDVEVGARPLYPMMLES-PQLRW-AFIRKVYSILAFQLLLTIAVAAVVVSVR 60

BLAST of MELO3C015800.1 vs. TAIR 10
Match: AT4G02690.1 (Bax inhibitor-1 family protein )

HSP 1 Score: 43.5 bits (101), Expect = 1.0e-04
Identity = 30/68 (44.12%), Postives = 37/68 (54.41%), Query Frame = 0

Query: 13 WNHPYRKPEARVGP------CFPVMLESPPQLRWPSSARVYYSFISVQLI------ATVV 69
          WN PYRK +   G        +P M E+ P+LRW    R  YS I+ QL+      ATVV
Sbjct: 4  WNLPYRKDDVETGVSSRRPLLYPAMHEN-PELRW-GFIRKVYSIIAFQLLATVAVAATVV 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0064032.16.9e-4095.40BI1-like protein [Cucumis melo var. makuwa] >TYK26183.1 BI1-like protein [Cucumi... [more]
XP_022155831.11.6e-0761.43BI1-like protein isoform X2 [Momordica charantia][more]
XP_022155830.11.6e-0761.43BI1-like protein isoform X1 [Momordica charantia][more]
XP_002524726.13.8e-0655.22protein LIFEGUARD 4 [Ricinus communis] >EEF37569.1 Transmembrane BAX inhibitor m... [more]
XP_002307607.14.2e-0553.85protein LIFEGUARD 2 [Populus trichocarpa] >KAF9854427.1 hypothetical protein H0E... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V6R53.3e-4095.40BI1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001... [more]
A0A6J1DSW97.5e-0861.43BI1-like protein isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022859 PE=3 ... [more]
A0A6J1DNI07.5e-0861.43BI1-like protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022859 PE=3 ... [more]
B9SFF71.9e-0655.22Transmembrane BAX inhibitor motif-containing protein, putative OS=Ricinus commun... [more]
B9H8C72.0e-0553.85Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G214000 PE=3 ... [more]
Match NameE-valueIdentityDescription
AT4G02690.11.0e-0444.12Bax inhibitor-1 family protein [more]
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C015800MELO3C015800gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C015800.1:exon:31731MELO3C015800.1:exon:31731exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C015800.1:cdsMELO3C015800.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C015800.1MELO3C015800.1-proteinpolypeptide