Sgr019771 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr019771
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	30S ribosomal protein 2, chloroplastic
Location	tig00153414: 104094 .. 110902 (+)
RNA-Seq Expression	Sgr019771
Synteny	Sgr019771

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTCGGCTTGAGTCCCCATCCAAACGGAGAGCATCAGCTCTACCCTGACACGGCCGCCGCCGCTGTTTTGGTTTTCGAGTTTATACCACTGGGAAGCAAGCTGACTGTCCGGCGGAATGCGGAGGGGAGCGTCGGAGATGCTCAGAACGACGCAGCCCAGCGCTGCGTCAGCGGAGGCCTTGTTGAATAAAGAGATTTCGACGTCGGTGGTCTGGATTCGATCTTCTGCAAATGCGAAAACCGTACCCCATTCTGGGTTTGCCGTTTTCTCGAAGAACTTGGTCGTTCCTTTGTAGTTTCCGAGCTTGACTTCGACGTAGGGGTCGCAAGGTTCCGGCAAGTCGCGGGCTCTTTCGACTTTCACGTAAAGAAATAGCATCTGTTCGACGAGATCGAAGGCCGTTTTCAGCCCGACGGAGGATTTGCCGCCATTGATGTTCGGCGAGGTCTCCTTCAGAGAGAAATCTTCCTGTGGCTTCTTTGGGGTTGCCTGGTTCTTATTCCCCATTGAAGAAAAGCTTCAAGAACTGGTTCCAATCCCCCAATGGCCTGCATGACAATGAAGAACAAAAACTATTAAAAACAGAACAATTTCGTTTGTAAACAGAGGAATCATAGAATCAGAGAGAAGTGTACCAGAGAGAGAGCAGAGAAGAGATGAGAAGCGTTGTGGGTTCGAAAGCTTAGAGACATGGAAGGCGTTTGCAGAGCTTGAAAGGGAAAGAGCTGTAAATGGAAAACTTTGAAAATGGTAACTGATGGAGAAGAAAGAGAGAGAAACAGGGAGTGACAGAGAGGACAATCCGGGAAACAAATCGAGCTCTGTAATTCTCTCTCTCTCTCTCTCTCTGTAATATAATGTATAGTATCATGCTTTAATTCCAGCATTTATAACTCCCTTTTAATTTCAAAAGATCTTGAAATTTTCTATTTTGATTTTACAGTTAATGAGATTTTAAACGATGCCATTATTATTATTTTTTCAATTCTACAATTAATTTAAGATTTTGTCGACCAAATTATGCAACGTTGTAATCAAAATCTTGATTATAACATGTGTTTTGTTATAAATATTGATTGAAAAGAAAAACTATAAGAAGAGTATTTATTTTTCATAAAATTCGTGAATTTATCTAATAGGTATACTATGTTAGCTTTTTGTTAAACACGCTAATTTTCTATCTTGTCGGAAGTTGTTGTGAACAAAGACATTTTTTCATGTTATTTCAAAATGAAGTTGGTACATTGTATACATCTTGAATTGTATACATAATTAATTGATTTAGAGCAATCCTAATCACATCTCGGACTATAATGGGGCAGGAATCCTCATTTCTGCTTGAAATTTGCCCTCAGCATATTTCATATTAGATAGTAACTTCTTTTATTTTTGTTAATAATTTTAGTTAGGCAGTTAATTTTCTGTTTTTGCTTATGTAGTTTAACCACATGGCAATTAGTTGGTATGTACACACTATATATACATGGATTGTAAACTATGAAAGTCGAATAAGAAATTCTCCACGTCTCCAGCTTAATATTTCATTTTATTATTATGAGAATAAAATCTATTACTTCTATTACTAAAGTTTTCACATTTGAGTCTTAAATTATGGTCCTGTACTACACGAAGGAACAAGAAAGCTAAAGAAAAGAGCTTAAACCAAAATACTTAATAGCATGACATTGTACATTTATACCAAACTTCTACCCATTTGTGCAGGTTCCAACTATAACTCAAATGATTCAATTGGCGTTCATTATTCTATAAAATTGGTTGGATTTGTAATTTTATATTTTAATTCACAAACCTATTAGATACAAAATTGAAAAAACATGACGTATTAGATACAAATCTGAAAATTTAAGACTATACTTGTAATTTACTGATTTTTAAAATTAAAGAAATTAAAGAAATTAAATTTACAATTTAATTCTTAACAAAAAAAAAAACAAAAAAAAAAAAACAATTGTAATGCCACGTGCGGGCTACACGATTTAGCTCAACCTCTGTTCTTGTCGACTGGATAAACCTCTGGCCTCACCTCAGGGTTCTATAACTCTCTCTCTCTCTCCCTCGCACCTCAAGCTTTACAGACCAAAAATGGCTTCTGTCTCGTCCATATTATCGCCACCGAATCTCATCTACAGCTCCACAAAATCGACTGAAACCCCACAAAAATTATCCAATCGATTTCTCCGACCAATCTCATTTCATCGCCGTCCAAACCTCCTCCGGCTTTCTCCCGGCCTTCTTACCTCTACCGCCAAAAACCCCACGAGGCTCTTCGCCGTCGCAGAAGCGGCGGTTACTGCTCAGGATCCCACTTCAGTGGCTGCCAGGAGACTCTACATTGGCAACATACCCAGAAATGTGGATAACAAGGAGCTCGCTCGGATTGTCGAAGAACATGGGGCTGTGGAGAAGGCCGAGGTGGGTAATTTCTGCTTTAAATTGTTCATGTTTTTCCATCATCTTCTCTTGGGGATTTTGAATTTTGATTTGTCCTATAATTTATTAATGGTTATCTAGCTCTGATACCCAACATCTTATCATTGCTTATTTCGTCTCAAAAAATCGCATTGATTGAATTTACTTGTCCATAAATTTATCAAAACTGCTGACTGTAGCCTGGCTTTGGGCTAAATTTGTTGACCATTACTTCCAAATGGAGTTTGCAGAATGTTATCCACGAAGGAAGATAGAGAAAACTTTGAACCCTTCTTTTACTTTAGTTTTGGGGAAGCTTTCAAGGAGTTTTTAGTTTTTGAGGTTGGATTCGGTTCTTGTCATCTATGAATCGAACCAAATCGATTTTCTCCTCTAGAATATGATAAGATGTACTTCAATAATTGCTAAGATAACACAAGGTAATCCTTGTTTATCGCTTATATATGGTTTTCAAACTGTTCATTCCAACTTGAATATCTTATGTCATCCTCATCAGAGCATGCCCATGGAGCCAATCACACGAGTTTCTCAGAAATCGGGATCTTGTTTAGGGGCCACGGGTAAGTTTTGCCTCTTTAAGGAGAGGGAAGAGTTCATAGGAGGTGAGGTGGAAGGACAGTTACATTCTGTTAGTTACAGTAAGCAACCATGCATTAAAGGCTATGAGAGTGTAGAGAAAGTCAGAAAGATGTTAGGAGAAAAGAGGATCGAATTCTCTAAAATGCCTGCCATTGGCTCGTAGAAATTCCATAGGTTTCATTTCAATTCTTGCTGCTTTCCGAGTTCTGTCAGGGTCATTGCGTTTTTACGAGAATATCTAAGATAAGTTCCTGGCTTTTCAGTCTGCTAATTGCAGCTGCAGCTGATCTTTAGCTAGTATCTTCTTGGTGACAAATCCAATGGGAAACTACTTTTGCCACCAGAAAGTTAAATGCCATAGACACTAGCATTTGGTTTACTTTGGTCGTTACCGACTCATGGAGATATTTATCAATCTTGAACCCAATTCTTCCTTGTTAGAAAAGTTACAAGCTAATTTATACTATTAGAAAAAGGATATCAATGTAATGTTTATCATTCTGAAAAACTAGCTAGTTCTTTCTATTAAGGTCAGAATTTCACCCAGCAAGGCACTTGAACCAAAAAGTCCTTAAATCAAGAAGTTAGCGACATTCTTGGAAAAAAATGTTTTTTGCAATCAATTTGCATGAAGAATTCTAGCATATCCTTGTTCTTAATCTTTACCTGCTGGCTGTTGGTGTTGCCTTTAAGACTCCAATTTTGTTCCATTTCCAGGTCATGTATGACAAATACTCTGGAAGGAGCCGCAGATTTGCCTTCGTTACCATGAAGTCTGTTGACGATGCAAATGCAGTAATTGAGAAACTGAATGAGACAGTAAGTTAGCACCTACGAAGTGCAACAAATATTGAAAAAGAAAATGAAAAAAAACAAAAAAAATCATTTCTTACTGTTCACTATATCAGTTGTGCTGACAATATCATTCCAACGACAGGATGTTGGAGGACGGACGATTAAAGTTAATATAACCGAAAAACCTTTGGTTACAGTCGATTTTTCACTTCTTCAGGCAGAGGAATCCCAGTTCATCGACAGTCCCTACAAAGTTTACGTAGGAAATATTTCAAGTACAGTTTCTACTGAAACACTCAAAAACTTATTCTCCGGGAAGGGTCAAGTTCTCAGTGCAAAGGTTTCACGGGTTCCTGGTACCTCGAAATCAAGTGGCTATGGTTTTGTTACCTTTTCTTCAGAGGAGGAAGTTGAAACCGCAATTTCATCTTTTAACAATGCTGTAAGTAACTTGCTCCCTTTCTCTGTTACATAAAATGCTGCTATACCGATACCAATTTACTCAGATTCTCTCTCACTTTCGGGGTCCATATCACATAAAGTTTCTTGGTTCGGGATTCTTGCATCGATGACATTCTTTCTCCTGTTTGGTATACATGGTTTAGTAGAGCATTCTTGGCTTCATTTTCTGTTTCCCTAAACAAGTGCATCTAGTAACATTCCTAATCACTAACTTGAAAGAAACGTTTCTAAATCTAGTTGAACATCTTCAGTAGTTATCGATACTACTTAACGGTTGGACGAGCTATGTTCTCGAAGAATGCCATACTAACCCGAACTCTCATACAGATTTTCGTTTTCGATTGGTTGGAAGAAGCTTGAGGCTGATATGTGTTTTTCTTTGCTGCAGTTGTTGGAAGGCCAACGAATCCGTGTAAACAAGGCTTGATTTTGTAGGGTTCTTTTGTAACAAAATGTATGGAAATTTCACATTTGCCTCTTGGCATGATATTGATGAACGGCACAGCAGGGGGCAGCTTTTTCACTCAATTTCTCTGTATTGATCATAAATGTATAATCTTGTTTATTTTTCTGTTTAAGCTCAATATTAGACTAAGATAAAAACAAATCTTTGATTGTATTTCTGCATTTTTTTCACAATAATTAATTATTCATCTATAACATATATCAAAATAAATAAGTGAAATAGGAAATGTGGTTCTATAAACTTATTTATATATTTTTTTTAATTTTAATATCTAACTTTTACACGTGTTGTTATAGACATTCGACCTCCAAATGTTATATAAAAAGTAATTTTAGTACTTCATTACATTTTGATTAATCATCTAAAAAAAATTAAATCTACTTTAAGATGTCACGTTTGAAACAATACACTTGACTTTAAATATTTACTCACTGGTAATAATTTTTCCCATATAAAGTTGAGAGAGTGAAATAAAACATTTGAAAGAGTAAACGCATGAAAATTCAAAAAATAAAATAAAATCCAAACCTAAATGGGATTAGAAGTAAAAAGAAAATTCATATTCATTTTATTCTTTTTTCTCTGAGAATTCATTTAACATTTTTTGTCTTCAATTAAATAAATATAGTAGTTCTTTTATGATGATTACAAAAAAATCTTTCAATTGGTATTAATTAAAAAGTAATATCGTTACAAAACAAATTAGAGGAGAAAAGAAGATAGACATCATAAAACTAACAAAATGAATGATTTTTATAATCCCCCAACAAGATTCTATAATTTATTTTGAGCCAAATCTTCAAAAAACTTGTTTAAAAAGTATTTTATATTAATTTTTTTAAAAAAATATTGACATTTTTAGCCTCCCTAATAGTCATCATTTTTTTAAACAAGAAATAATAGAAAATTGGAACAGTCATTTGCTATTGTCACACACACAAAAAAGACACATTTTCAAATAAAAAAACAATTAAAAATATTAGTCTGCAAAACAAAATTTGAAAGATATATAAGTTTTAAATTCAACTTTCAACCTATTTTTTCATCTTGATGTCTATTTTAGTCTCTAAATTTTTAAGTTTATTATATTTCAGTCTATAAACTTTTAAATTGCCTATTTTAGTCCTATAACTTAAAAAAAAAAATAACTATTTCGATTGTTATTTTGATTTTTTGTTTTAACAAATGGACAATGTATCTTTGAGGATGTGTATTAACTTGCAAATATAAAAATGAATTGGAGCCACAAAAGTTGACTAAAGTGAGTATTAAGTGAACGGATATTAAAAGACAAAATAATAACAATGACCAAAATTATAAATTTTTTAAAGTTGAAACTGAAATAGATATTTTAAAAGTTTAGGAGACTAAAATAATTACTTTTTAAAAATTTGAGATTATAATAGATATTTTAAAAATTTAAAGATCAAAATAAAAAAATATTGAAAGATCGAACTAGAATTATATTTAAACTTAAATTTAAATAACCTTTTTAAGTTACGAAAAATGACAACGAACCCGTTAAATCCTTGTTTAATTCTTAAATAATTAAAAAATATATTTTTTTAAATATCACATCATACGGCGGTGGGATCACTTGGCAAATGCATTAGAGGCTAATTACTTGAGGAGCAAGCAAATTGAACCAAGATTTTCCAGGAAAATGAACCTCTAGTATAAGGAAAGCTGCTTACCTGTAAAAATTGAGTAGAATCTGATTTGCAGGCCGCTTGTTGAGCAAGCAATTGGACCAACAGATTCCATTTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCACATTCTATAAATTCAACATGAATTGCAGCTTCATTTTCCATCAATACACGACGAACTTACAGCGCGATCTCGTTAGGGCAAAACAAGAAGGCGATTGCTATGGGTTTCTTCTCAGAAATGTTCGGCCGTCACTTCTCCTCCCGAGTCTCCGCCGACGTCGTCAAGGAGCCGCCGACGAAGAACCAAGAATCGAAGCAGAAATTGGCGGAGCCTTCGCGAGCTCCGATTGTTGTGCCTTATTTTCCTGTTAA

mRNA sequence

ATGGCTGTCGGCTTGAGTCCCCATCCAAACGGAGAGCATCAGCTCTACCCTGACACGGCCGCCGCCGCTGTTTTGGTTTTCGAGTTTATACCACTGGGAAGCAAGCTGACTGTCCGGCGGAATGCGGAGGGGAGCGTCGGAGATGCTCAGAACGACGCAGCCCAGCGCTGCCATCTGTTCGACGAGATCGAAGGCCGTTTTCAGCCCGACGGAGGATTTGCCGCCATTGATGTTCGGCGAGGTCTCCTTCAGAGAGAAATCTTCCTGTGGCTTCTTTGGGGTTGCCTGGGTTCTATAACTCTCTCTCTCTCTCCCTCGCACCTCAAGCTTTACAGACCAAAAATGGCTTCTGTCTCGTCCATATTATCGCCACCGAATCTCATCTACAGCTCCACAAAATCGACTGAAACCCCACAAAAATTATCCAATCGATTTCTCCGACCAATCTCATTTCATCGCCGTCCAAACCTCCTCCGGCTTTCTCCCGGCCTTCTTACCTCTACCGCCAAAAACCCCACGAGGCTCTTCGCCGTCGCAGAAGCGGCGGTTACTGCTCAGGATCCCACTTCAGTGGCTGCCAGGAGACTCTACATTGGCAACATACCCAGAAATGTGGATAACAAGGAGCTCGCTCGGATTGTCGAAGAACATGGGGCTGTGGAGAAGGCCGAGGTCATGTATGACAAATACTCTGGAAGGAGCCGCAGATTTGCCTTCGTTACCATGAAGTCTGTTGACGATGCAAATGCAGTAATTGAGAAACTGAATGAGACAGATGTTGGAGGACGGACGATTAAAGTTAATATAACCGAAAAACCTTTGGTTACAGTCGATTTTTCACTTCTTCAGGCAGAGGAATCCCAGTTCATCGACAGTCCCTACAAAGTTTACGTAGGAAATATTTCAAGTACAGTTTCTACTGAAACACTCAAAAACTTATTCTCCGGGAAGGGTCAAGTTCTCAGTGCAAAGGTTTCACGGGTTCCTGGTACCTCGAAATCAAGTGGCTATGGTTTTGTTACCTTTTCTTCAGAGGAGGAAGTTGAAACCGCAATTTCATCTTTTAACAATGCTTTGAACATCTTCAGTAGTTATCGATACTACTTAACGGTTGGACGAGCTATGTTCTCGAAGAATGCCATACTAACCCGAACTCTCATACAGATTTTCGTTTTCGATTGGCCGCTTGTTGAGCAAGCAATTGGACCAACAGATTCCATTTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCACATTCTATAAATTCAACATGAATTGCAGCTTCATTTTCCATCAATACACGACGAACTTACAGCGCGATCTCGTTAGGGCAAAACAAGAAGGCGATTGCTATGGGTTTCTTCTCAGAAATGTTCGGCCGTCACTTCTCCTCCCGAGTCTCCGCCGACGTCGTCAAGGAGCCGCCGACGAAGAACCAAGAATCGAAGCAGAAATTGGCGGAGCCTTCGCGAGCTCCGATTGTTGTGCCTTATTTTCCTGTTAA

Coding sequence (CDS)

ATGGCTGTCGGCTTGAGTCCCCATCCAAACGGAGAGCATCAGCTCTACCCTGACACGGCCGCCGCCGCTGTTTTGGTTTTCGAGTTTATACCACTGGGAAGCAAGCTGACTGTCCGGCGGAATGCGGAGGGGAGCGTCGGAGATGCTCAGAACGACGCAGCCCAGCGCTGCCATCTGTTCGACGAGATCGAAGGCCGTTTTCAGCCCGACGGAGGATTTGCCGCCATTGATGTTCGGCGAGGTCTCCTTCAGAGAGAAATCTTCCTGTGGCTTCTTTGGGGTTGCCTGGGTTCTATAACTCTCTCTCTCTCTCCCTCGCACCTCAAGCTTTACAGACCAAAAATGGCTTCTGTCTCGTCCATATTATCGCCACCGAATCTCATCTACAGCTCCACAAAATCGACTGAAACCCCACAAAAATTATCCAATCGATTTCTCCGACCAATCTCATTTCATCGCCGTCCAAACCTCCTCCGGCTTTCTCCCGGCCTTCTTACCTCTACCGCCAAAAACCCCACGAGGCTCTTCGCCGTCGCAGAAGCGGCGGTTACTGCTCAGGATCCCACTTCAGTGGCTGCCAGGAGACTCTACATTGGCAACATACCCAGAAATGTGGATAACAAGGAGCTCGCTCGGATTGTCGAAGAACATGGGGCTGTGGAGAAGGCCGAGGTCATGTATGACAAATACTCTGGAAGGAGCCGCAGATTTGCCTTCGTTACCATGAAGTCTGTTGACGATGCAAATGCAGTAATTGAGAAACTGAATGAGACAGATGTTGGAGGACGGACGATTAAAGTTAATATAACCGAAAAACCTTTGGTTACAGTCGATTTTTCACTTCTTCAGGCAGAGGAATCCCAGTTCATCGACAGTCCCTACAAAGTTTACGTAGGAAATATTTCAAGTACAGTTTCTACTGAAACACTCAAAAACTTATTCTCCGGGAAGGGTCAAGTTCTCAGTGCAAAGGTTTCACGGGTTCCTGGTACCTCGAAATCAAGTGGCTATGGTTTTGTTACCTTTTCTTCAGAGGAGGAAGTTGAAACCGCAATTTCATCTTTTAACAATGCTTTGAACATCTTCAGTAGTTATCGATACTACTTAACGGTTGGACGAGCTATGTTCTCGAAGAATGCCATACTAACCCGAACTCTCATACAGATTTTCGTTTTCGATTGGCCGCTTGTTGAGCAAGCAATTGGACCAACAGATTCCATTTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCACATTCTATAAATTCAACATGAATTGCAGCTTCATTTTCCATCAATACACGACGAACTTACAGCGCGATCTCGTTAGGGCAAAACAAGAAGGCGATTGCTATGGGTTTCTTCTCAGAAATGTTCGGCCGTCACTTCTCCTCCCGAGTCTCCGCCGACGTCGTCAAGGAGCCGCCGACGAAGAACCAAGAATCGAAGCAGAAATTGGCGGAGCCTTCGCGAGCTCCGATTGTTGTGCCTTATTTTCCTGTTAA

Protein sequence

MAVGLSPHPNGEHQLYPDTAAAAVLVFEFIPLGSKLTVRRNAEGSVGDAQNDAAQRCHLFDEIEGRFQPDGGFAAIDVRRGLLQREIFLWLLWGCLGSITLSLSPSHLKLYRPKMASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVTVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNALNIFSSYRYYLTVGRAMFSKNAILTRTLIQIFVFDWPLVEQAIGPTDSIFFFFFFFFFIFTFYKFNMNCSFIFHQYTTNLQRDLVRAKQEGDCYGFLLRNVRPSLLLPSLRRRRQGAADEEPRIEAEIGGAFASSDCCALFSC

Homology

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BLAST of Sgr019771 vs. NCBI nr
Match: XP_022153800.1 (30S ribosomal protein 2, chloroplastic [Momordica charantia])

HSP 1 Score: 402.1 bits (1032), Expect = 6.9e-108
Identity = 220/248 (88.71%), Postives = 229/248 (92.34%), Query Frame = 0


Query: 115 MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTR 174
           MAS+SSILSPPNLI+SSTK TETP KLSN+FLRPISFHRRP LLRLS  L TS AK+  R
Sbjct: 1   MASLSSILSPPNLIHSSTKPTETPHKLSNQFLRPISFHRRPPLLRLSSVLQTSAAKHTIR 60

Query: 175 LFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRS 234
           LFAVAEAAVTAQDP+S AARRLYIGNIPRNVDN++L RIVEEHGAVEKAEVMYDKYSGRS
Sbjct: 61  LFAVAEAAVTAQDPSSAAARRLYIGNIPRNVDNEQLTRIVEEHGAVEKAEVMYDKYSGRS 120

Query: 235 RRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVT---VDFSLLQAEESQFID 294
           RRFAFVTMK+VDDANAVIEKLNET+V GRTIKVNITEKPLVT   VD SLLQAEESQFID
Sbjct: 121 RRFAFVTMKTVDDANAVIEKLNETEVEGRTIKVNITEKPLVTTTSVDLSLLQAEESQFID 180

Query: 295 SPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETA 354
           SPYKVYVGNISSTVSTETLK LFS KG VLSAKVSRVPGTSKSSGYGFVTFSSEEEVETA
Sbjct: 181 SPYKVYVGNISSTVSTETLKKLFSEKGNVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETA 240

Query: 355 ISSFNNAL 360
           ISSFNNAL
Sbjct: 241 ISSFNNAL 248

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BLAST of Sgr019771 vs. NCBI nr
Match: XP_022954328.1 (30S ribosomal protein 2, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 395.2 bits (1014), Expect = 8.4e-106
Identity = 215/255 (84.31%), Postives = 229/255 (89.80%), Query Frame = 0


Query: 106 SHLKLYRPKMASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLL 165
           SH KL   KMAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R  LLR+SPGL 
Sbjct: 14  SHHKLCTAKMASISSILTPANLIHSSIKPTEIPQTLSTQFLRPISFHPRYTLLRVSPGLQ 73

Query: 166 TSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEV 225
           TS  K  TRLFAVAEAAV+ QDP+SVAAR+LYIGNIPRNV N+EL RIVEEHGAVEKAEV
Sbjct: 74  TSAGKRRTRLFAVAEAAVSVQDPSSVAARKLYIGNIPRNVGNEELTRIVEEHGAVEKAEV 133

Query: 226 MYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQA 285
           MYDKYSGRSRRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA
Sbjct: 134 MYDKYSGRSRRFAFVTMKTVDDANAVIEKLNDTEVGGRTIKVNITEKPLVNTVDMSLLQA 193

Query: 286 EESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSS 345
           +ESQFIDSPYKVYVGNISSTVSTETLKN FS KG+VLSAKVSRVPGTSKSSGYGFVTFSS
Sbjct: 194 DESQFIDSPYKVYVGNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSS 253

Query: 346 EEEVETAISSFNNAL 360
           EEEVE AISSFNNAL
Sbjct: 254 EEEVEAAISSFNNAL 268

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BLAST of Sgr019771 vs. NCBI nr
Match: XP_022991923.1 (30S ribosomal protein 2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 387.9 bits (995), Expect = 1.3e-103
Identity = 210/246 (85.37%), Postives = 224/246 (91.06%), Query Frame = 0


Query: 115 MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTR 174
           MAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R  LLR+SPGL TS  K  TR
Sbjct: 1   MASISSILTPANLIHSSIKPTEIPQNLSTQFLRPISFHPRYTLLRVSPGLQTSAGKRRTR 60

Query: 175 LFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRS 234
           LFAVAEAAV+ QDP+SVAAR+LYIGNIPRNV N+EL RIVEEHGAVEKAEVMYDKYSGRS
Sbjct: 61  LFAVAEAAVSVQDPSSVAARKLYIGNIPRNVGNEELTRIVEEHGAVEKAEVMYDKYSGRS 120

Query: 235 RRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSP 294
           RRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA+ESQFIDSP
Sbjct: 121 RRFAFVTMKTVDDANAVIEKLNDTEVGGRTIKVNITEKPLVNTVDMSLLQADESQFIDSP 180

Query: 295 YKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAIS 354
           YKVYVGNISSTVSTETLKN FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AIS
Sbjct: 181 YKVYVGNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAIS 240

Query: 355 SFNNAL 360
           SFNNAL
Sbjct: 241 SFNNAL 246

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BLAST of Sgr019771 vs. NCBI nr
Match: XP_022954329.1 (30S ribosomal protein 2, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 387.5 bits (994), Expect = 1.8e-103
Identity = 210/246 (85.37%), Postives = 224/246 (91.06%), Query Frame = 0


Query: 115 MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTR 174
           MAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R  LLR+SPGL TS  K  TR
Sbjct: 1   MASISSILTPANLIHSSIKPTEIPQTLSTQFLRPISFHPRYTLLRVSPGLQTSAGKRRTR 60

Query: 175 LFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRS 234
           LFAVAEAAV+ QDP+SVAAR+LYIGNIPRNV N+EL RIVEEHGAVEKAEVMYDKYSGRS
Sbjct: 61  LFAVAEAAVSVQDPSSVAARKLYIGNIPRNVGNEELTRIVEEHGAVEKAEVMYDKYSGRS 120

Query: 235 RRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSP 294
           RRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA+ESQFIDSP
Sbjct: 121 RRFAFVTMKTVDDANAVIEKLNDTEVGGRTIKVNITEKPLVNTVDMSLLQADESQFIDSP 180

Query: 295 YKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAIS 354
           YKVYVGNISSTVSTETLKN FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AIS
Sbjct: 181 YKVYVGNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAIS 240

Query: 355 SFNNAL 360
           SFNNAL
Sbjct: 241 SFNNAL 246

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BLAST of Sgr019771 vs. NCBI nr
Match: KAG6575671.1 (30S ribosomal protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014222.1 30S ribosomal protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 386.3 bits (991), Expect = 3.9e-103
Identity = 209/246 (84.96%), Postives = 223/246 (90.65%), Query Frame = 0


Query: 115 MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTR 174
           MAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R  LLR+SPGL TS  K  TR
Sbjct: 1   MASISSILTPANLIHSSIKPTEIPQNLSTQFLRPISFHPRYTLLRVSPGLQTSAGKRRTR 60

Query: 175 LFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRS 234
           LFAVAE AV+ QDP+SVAAR+LYIGNIPRNV N+EL RIVEEHGAVEKAEVMYDKYSGRS
Sbjct: 61  LFAVAEVAVSVQDPSSVAARKLYIGNIPRNVGNEELTRIVEEHGAVEKAEVMYDKYSGRS 120

Query: 235 RRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSP 294
           RRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA+ESQFIDSP
Sbjct: 121 RRFAFVTMKTVDDANAVIEKLNDTEVGGRTIKVNITEKPLVNTVDMSLLQADESQFIDSP 180

Query: 295 YKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAIS 354
           YKVYVGNISSTVSTETLKN FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AIS
Sbjct: 181 YKVYVGNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAIS 240

Query: 355 SFNNAL 360
           SFNNAL
Sbjct: 241 SFNNAL 246

[Close]

BLAST of Sgr019771 vs. ExPASy Swiss-Prot
Match: Q8VYM4 (30S ribosomal protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSRP2 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-63
Identity = 131/207 (63.29%), Postives = 160/207 (77.29%), Query Frame = 0


Query: 154 RPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARI 213
           R +  R  P  +T T + P  L           DP+S AARR+YIGNIPR V N++L ++
Sbjct: 47  RSSRTRFIPYAVTETEEKPAAL-----------DPSSEAARRVYIGNIPRTVTNEQLTKL 106

Query: 214 VEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKP 273
           VEEHGAVEK +VMYDKYSGRSRRF F TMKSV+DANAV+EKLN   V GR IKVNITEKP
Sbjct: 107 VEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKP 166

Query: 274 LV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTS 333
           +  + D S+LQ+E+S F+DSPYKVYVGN++ TV+ E L+NLFS KG+V+SAKVSRVPGTS
Sbjct: 167 IASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTS 226

Query: 334 KSSGYGFVTFSSEEEVETAISSFNNAL 360
           KS+G+GFVTFSSEE+VE AI + NN+L
Sbjct: 227 KSTGFGFVTFSSEEDVEAAIVALNNSL 242

[Close]

BLAST of Sgr019771 vs. ExPASy Swiss-Prot
Match: P82277 (30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP2 PE=1 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.4e-63
Identity = 137/249 (55.02%), Postives = 180/249 (72.29%), Query Frame = 0


Query: 115 MASVSSILSPPNLI-YSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPT 174
           MA++SSIL    L+ + S+ S+ +  K S++ L  +        L+L   + T+      
Sbjct: 1   MATISSILPCHGLLQHCSSSSSSSKPKFSSQNLVQLQSFSNGFGLKLKTRVSTNPPLLKV 60

Query: 175 RLFAVAEAAVTAQDPTS---VAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKY 234
           R     E + ++   +S     ARRLY+GNIPRN++N EL  IVEEHGA+E AEVMYDKY
Sbjct: 61  RAVVTEETSSSSTASSSSDGEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKY 120

Query: 235 SGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVTVDFSLLQAEESQFI 294
           SGRSRRF FVTMK+V+DANAVIEKLN+T++GGR IKVNITEKPL  +D +  QAE+SQF+
Sbjct: 121 SGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFV 180

Query: 295 DSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVET 354
           +SPYKVY+GN++ TV+ E LK+ FS KG+VL AKV R PGTSKS+G+GFV+FSSEEEVE 
Sbjct: 181 ESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEA 240

Query: 355 AISSFNNAL 360
           AI + NN++
Sbjct: 241 AIQALNNSV 249

[Close]

BLAST of Sgr019771 vs. ExPASy Swiss-Prot
Match: Q39061 (RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.8e-27
Identity = 63/165 (38.18%), Postives = 103/165 (62.42%), Query Frame = 0


Query: 195 RLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEK 254
           RLY+GN+P  + + EL++I  E G V   +++YDK + RSR F FVTM S+++A   ++ 
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQM 176

Query: 255 LNETDVGGRTIKVNITEKPL---VTVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLK 314
            N + +GGRT+KVN  E P      V  + ++     ++DSP+KVY GN+   ++++ LK
Sbjct: 177 FNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLK 236

Query: 315 NLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFN 357
           + F  +  VL AKV     T +S G+GF++F S E V++A+++ N
Sbjct: 237 DAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMN 281

[Close]

BLAST of Sgr019771 vs. ExPASy Swiss-Prot
Match: P19684 (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.8e-26
Identity = 66/170 (38.82%), Postives = 107/170 (62.94%), Query Frame = 0


Query: 190 SVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDAN 249
           SV   RLY+GN+P ++ + +L+ I  E G V   E++YD+ + RSR FAFVTM SV++A 
Sbjct: 110 SVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAK 169

Query: 250 AVIEKLNETDVGGRTIKVNITEKPL---VTVDFSLLQAEESQFIDSPYKVYVGNISSTVS 309
             I   + + VGGRT+KVN  E P      V  + +++    F+DSP+K+YV N+S  ++
Sbjct: 170 EAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALT 229

Query: 310 TETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFN 357
           ++ L++ F+ +   +SAKV     + +S G+GF+TFSS E + +A+ + N
Sbjct: 230 SQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMN 279

[Close]

BLAST of Sgr019771 vs. ExPASy Swiss-Prot
Match: Q9ZUU4 (RNA-binding protein CP29B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP29B PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 6.4e-24
Identity = 68/178 (38.20%), Postives = 101/178 (56.74%), Query Frame = 0


Query: 195 RLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEK 254
           +L++GN+P NVD+ +LA++ E  G VE  EV+YDK +GRSR F FVTM SV +  A  ++
Sbjct: 92  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151

Query: 255 LNETDVGGRTIKVNITEKPLVTVDFSLLQAEESQF--------------IDSPYKVYVGN 314
            N  ++ GR ++VN    P    D    +   S F                S  +VYVGN
Sbjct: 152 FNGYELDGRPLRVNAGPPPPKRED-GFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGN 211

Query: 315 ISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNA 359
           +S  V    L++LFS +G+V+ A+V     + +S G+GFVT+ S +EV+ AI S + A
Sbjct: 212 LSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGA 268

[Close]

BLAST of Sgr019771 vs. ExPASy TrEMBL
Match: A0A6J1DHV7 (30S ribosomal protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021229 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 3.3e-108
Identity = 220/248 (88.71%), Postives = 229/248 (92.34%), Query Frame = 0


Query: 115 MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTR 174
           MAS+SSILSPPNLI+SSTK TETP KLSN+FLRPISFHRRP LLRLS  L TS AK+  R
Sbjct: 1   MASLSSILSPPNLIHSSTKPTETPHKLSNQFLRPISFHRRPPLLRLSSVLQTSAAKHTIR 60

Query: 175 LFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRS 234
           LFAVAEAAVTAQDP+S AARRLYIGNIPRNVDN++L RIVEEHGAVEKAEVMYDKYSGRS
Sbjct: 61  LFAVAEAAVTAQDPSSAAARRLYIGNIPRNVDNEQLTRIVEEHGAVEKAEVMYDKYSGRS 120

Query: 235 RRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVT---VDFSLLQAEESQFID 294
           RRFAFVTMK+VDDANAVIEKLNET+V GRTIKVNITEKPLVT   VD SLLQAEESQFID
Sbjct: 121 RRFAFVTMKTVDDANAVIEKLNETEVEGRTIKVNITEKPLVTTTSVDLSLLQAEESQFID 180

Query: 295 SPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETA 354
           SPYKVYVGNISSTVSTETLK LFS KG VLSAKVSRVPGTSKSSGYGFVTFSSEEEVETA
Sbjct: 181 SPYKVYVGNISSTVSTETLKKLFSEKGNVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETA 240

Query: 355 ISSFNNAL 360
           ISSFNNAL
Sbjct: 241 ISSFNNAL 248

[Close]

BLAST of Sgr019771 vs. ExPASy TrEMBL
Match: A0A6J1GQT6 (30S ribosomal protein 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456607 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 4.1e-106
Identity = 215/255 (84.31%), Postives = 229/255 (89.80%), Query Frame = 0


Query: 106 SHLKLYRPKMASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLL 165
           SH KL   KMAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R  LLR+SPGL 
Sbjct: 14  SHHKLCTAKMASISSILTPANLIHSSIKPTEIPQTLSTQFLRPISFHPRYTLLRVSPGLQ 73

Query: 166 TSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEV 225
           TS  K  TRLFAVAEAAV+ QDP+SVAAR+LYIGNIPRNV N+EL RIVEEHGAVEKAEV
Sbjct: 74  TSAGKRRTRLFAVAEAAVSVQDPSSVAARKLYIGNIPRNVGNEELTRIVEEHGAVEKAEV 133

Query: 226 MYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQA 285
           MYDKYSGRSRRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA
Sbjct: 134 MYDKYSGRSRRFAFVTMKTVDDANAVIEKLNDTEVGGRTIKVNITEKPLVNTVDMSLLQA 193

Query: 286 EESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSS 345
           +ESQFIDSPYKVYVGNISSTVSTETLKN FS KG+VLSAKVSRVPGTSKSSGYGFVTFSS
Sbjct: 194 DESQFIDSPYKVYVGNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSS 253

Query: 346 EEEVETAISSFNNAL 360
           EEEVE AISSFNNAL
Sbjct: 254 EEEVEAAISSFNNAL 268

[Close]

BLAST of Sgr019771 vs. ExPASy TrEMBL
Match: A0A6J1JXN0 (30S ribosomal protein 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111488418 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 6.5e-104
Identity = 210/246 (85.37%), Postives = 224/246 (91.06%), Query Frame = 0


Query: 115 MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTR 174
           MAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R  LLR+SPGL TS  K  TR
Sbjct: 1   MASISSILTPANLIHSSIKPTEIPQNLSTQFLRPISFHPRYTLLRVSPGLQTSAGKRRTR 60

Query: 175 LFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRS 234
           LFAVAEAAV+ QDP+SVAAR+LYIGNIPRNV N+EL RIVEEHGAVEKAEVMYDKYSGRS
Sbjct: 61  LFAVAEAAVSVQDPSSVAARKLYIGNIPRNVGNEELTRIVEEHGAVEKAEVMYDKYSGRS 120

Query: 235 RRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSP 294
           RRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA+ESQFIDSP
Sbjct: 121 RRFAFVTMKTVDDANAVIEKLNDTEVGGRTIKVNITEKPLVNTVDMSLLQADESQFIDSP 180

Query: 295 YKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAIS 354
           YKVYVGNISSTVSTETLKN FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AIS
Sbjct: 181 YKVYVGNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAIS 240

Query: 355 SFNNAL 360
           SFNNAL
Sbjct: 241 SFNNAL 246

[Close]

BLAST of Sgr019771 vs. ExPASy TrEMBL
Match: A0A6J1GSN8 (30S ribosomal protein 2, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456607 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 8.5e-104
Identity = 210/246 (85.37%), Postives = 224/246 (91.06%), Query Frame = 0


Query: 115 MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTR 174
           MAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R  LLR+SPGL TS  K  TR
Sbjct: 1   MASISSILTPANLIHSSIKPTEIPQTLSTQFLRPISFHPRYTLLRVSPGLQTSAGKRRTR 60

Query: 175 LFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRS 234
           LFAVAEAAV+ QDP+SVAAR+LYIGNIPRNV N+EL RIVEEHGAVEKAEVMYDKYSGRS
Sbjct: 61  LFAVAEAAVSVQDPSSVAARKLYIGNIPRNVGNEELTRIVEEHGAVEKAEVMYDKYSGRS 120

Query: 235 RRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSP 294
           RRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA+ESQFIDSP
Sbjct: 121 RRFAFVTMKTVDDANAVIEKLNDTEVGGRTIKVNITEKPLVNTVDMSLLQADESQFIDSP 180

Query: 295 YKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAIS 354
           YKVYVGNISSTVSTETLKN FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AIS
Sbjct: 181 YKVYVGNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAIS 240

Query: 355 SFNNAL 360
           SFNNAL
Sbjct: 241 SFNNAL 246

[Close]

BLAST of Sgr019771 vs. ExPASy TrEMBL
Match: A0A5A7UYL6 (30S ribosomal protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001110 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 8.8e-93
Identity = 196/246 (79.67%), Postives = 215/246 (87.40%), Query Frame = 0


Query: 115 MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTR 174
           MAS+SSIL+P NLI++S K TE  Q LS++FLRPISFH    LLR+SP      A+ PTR
Sbjct: 1   MASISSILTPTNLIHTSKKPTEISQALSSQFLRPISFHPPHILLRISP----VAARPPTR 60

Query: 175 LFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRS 234
           LFAVAEAA   Q  +SVA R+LYIGNIPRNV+N+EL RIV+EHGAVEKAEVMYDKYSGRS
Sbjct: 61  LFAVAEAA--TQGASSVAERKLYIGNIPRNVNNEELTRIVQEHGAVEKAEVMYDKYSGRS 120

Query: 235 RRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSP 294
           RRFAFVTMK+V+DANA IEKLNET+VGGR IKVNITEKP+V TVD S+LQAEESQFIDSP
Sbjct: 121 RRFAFVTMKTVEDANAAIEKLNETEVGGRKIKVNITEKPVVNTVDLSILQAEESQFIDSP 180

Query: 295 YKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAIS 354
           YKVYVGNISSTVSTETLKN FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AIS
Sbjct: 181 YKVYVGNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVEAAIS 240

Query: 355 SFNNAL 360
           SFNNAL
Sbjct: 241 SFNNAL 240

[Close]

BLAST of Sgr019771 vs. TAIR 10
Match: AT3G52150.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 245.7 bits (626), Expect = 7.7e-65
Identity = 131/207 (63.29%), Postives = 160/207 (77.29%), Query Frame = 0


Query: 154 RPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARI 213
           R +  R  P  +T T + P  L           DP+S AARR+YIGNIPR V N++L ++
Sbjct: 47  RSSRTRFIPYAVTETEEKPAAL-----------DPSSEAARRVYIGNIPRTVTNEQLTKL 106

Query: 214 VEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKP 273
           VEEHGAVEK +VMYDKYSGRSRRF F TMKSV+DANAV+EKLN   V GR IKVNITEKP
Sbjct: 107 VEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKP 166

Query: 274 LV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTS 333
           +  + D S+LQ+E+S F+DSPYKVYVGN++ TV+ E L+NLFS KG+V+SAKVSRVPGTS
Sbjct: 167 IASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTS 226

Query: 334 KSSGYGFVTFSSEEEVETAISSFNNAL 360
           KS+G+GFVTFSSEE+VE AI + NN+L
Sbjct: 227 KSTGFGFVTFSSEEDVEAAIVALNNSL 242

[Close]

BLAST of Sgr019771 vs. TAIR 10
Match: AT3G52150.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 245.7 bits (626), Expect = 7.7e-65
Identity = 131/207 (63.29%), Postives = 160/207 (77.29%), Query Frame = 0


Query: 154 RPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARI 213
           R +  R  P  +T T + P  L           DP+S AARR+YIGNIPR V N++L ++
Sbjct: 47  RSSRTRFIPYAVTETEEKPAAL-----------DPSSEAARRVYIGNIPRTVTNEQLTKL 106

Query: 214 VEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKP 273
           VEEHGAVEK +VMYDKYSGRSRRF F TMKSV+DANAV+EKLN   V GR IKVNITEKP
Sbjct: 107 VEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKP 166

Query: 274 LV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTS 333
           +  + D S+LQ+E+S F+DSPYKVYVGN++ TV+ E L+NLFS KG+V+SAKVSRVPGTS
Sbjct: 167 IASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTS 226

Query: 334 KSSGYGFVTFSSEEEVETAISSFNNAL 360
           KS+G+GFVTFSSEE+VE AI + NN+L
Sbjct: 227 KSTGFGFVTFSSEEDVEAAIVALNNSL 242

[Close]

BLAST of Sgr019771 vs. TAIR 10
Match: AT3G52380.1 (chloroplast RNA-binding protein 33 )

HSP 1 Score: 124.8 bits (312), Expect = 2.0e-28
Identity = 63/165 (38.18%), Postives = 103/165 (62.42%), Query Frame = 0


Query: 195 RLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEK 254
           RLY+GN+P  + + EL++I  E G V   +++YDK + RSR F FVTM S+++A   ++ 
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQM 176

Query: 255 LNETDVGGRTIKVNITEKPL---VTVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLK 314
            N + +GGRT+KVN  E P      V  + ++     ++DSP+KVY GN+   ++++ LK
Sbjct: 177 FNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLK 236

Query: 315 NLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFN 357
           + F  +  VL AKV     T +S G+GF++F S E V++A+++ N
Sbjct: 237 DAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMN 281

[Close]

BLAST of Sgr019771 vs. TAIR 10
Match: AT1G60000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 123.2 bits (308), Expect = 5.7e-28
Identity = 82/252 (32.54%), Postives = 137/252 (54.37%), Query Frame = 0


Query: 122 LSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRL---SPGLLTSTAKNPTRLFAV 181
           ++  +++ S  KS   P       L   ++     LLR    +P  L  ++++ +R F V
Sbjct: 1   MAASSVLLSCFKSHHQP-----NLLHGCNYSSNQTLLRFNFSTPKPLLISSRSCSRRFRV 60

Query: 182 AEAAVTAQ--------------DPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAE 241
               +T +              DP +    +LY GN+P NVD+  LA+I+++    E  E
Sbjct: 61  LSETITVKLEEEEKDDGASAVLDPPAAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVE 120

Query: 242 VMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVTVDFSLLQA 301
           V+Y++ +G+SR FAFVTM +V+D N +I+ L+ T+  GR +KVN  +KP           
Sbjct: 121 VLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADKPKPN-------- 180

Query: 302 EESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSS 357
           +E  + ++ +K++VGN+S TV++E+L   F   G V+ A+V     T +S GYGFV +SS
Sbjct: 181 KEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSS 239

[Close]

BLAST of Sgr019771 vs. TAIR 10
Match: AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 113.6 bits (283), Expect = 4.5e-25
Identity = 68/178 (38.20%), Postives = 101/178 (56.74%), Query Frame = 0


Query: 195 RLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEK 254
           +L++GN+P NVD+ +LA++ E  G VE  EV+YDK +GRSR F FVTM SV +  A  ++
Sbjct: 92  KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151

Query: 255 LNETDVGGRTIKVNITEKPLVTVDFSLLQAEESQF--------------IDSPYKVYVGN 314
            N  ++ GR ++VN    P    D    +   S F                S  +VYVGN
Sbjct: 152 FNGYELDGRPLRVNAGPPPPKRED-GFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGN 211

Query: 315 ISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNA 359
           +S  V    L++LFS +G+V+ A+V     + +S G+GFVT+ S +EV+ AI S + A
Sbjct: 212 LSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGA 268

The following BLAST results are available for this feature:

BLAST of Sgr019771 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153800.1	6.9e-108	88.71	30S ribosomal protein 2, chloroplastic [Momordica charantia]	[more]
XP_022954328.1	8.4e-106	84.31	30S ribosomal protein 2, chloroplastic-like isoform X1 [Cucurbita moschata]	[more]
XP_022991923.1	1.3e-103	85.37	30S ribosomal protein 2, chloroplastic-like [Cucurbita maxima]	[more]
XP_022954329.1	1.8e-103	85.37	30S ribosomal protein 2, chloroplastic-like isoform X2 [Cucurbita moschata]	[more]
KAG6575671.1	3.9e-103	84.96	30S ribosomal protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of Sgr019771 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYM4	1.1e-63	63.29	30S ribosomal protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSRP2 ...	[more]
P82277	1.4e-63	55.02	30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP2 PE=...	[more]
Q39061	2.8e-27	38.18	RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 ...	[more]
P19684	1.8e-26	38.82	33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=...	[more]
Q9ZUU4	6.4e-24	38.20	RNA-binding protein CP29B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP29...	[more]

BLAST of Sgr019771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHV7	3.3e-108	88.71	30S ribosomal protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1GQT6	4.1e-106	84.31	30S ribosomal protein 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1JXN0	6.5e-104	85.37	30S ribosomal protein 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1GSN8	8.5e-104	85.37	30S ribosomal protein 2, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A5A7UYL6	8.8e-93	79.67	30S ribosomal protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sgr019771 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52150.1	7.7e-65	63.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52150.2	7.7e-65	63.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52380.1	2.0e-28	38.18	chloroplast RNA-binding protein 33	[more]
AT1G60000.1	5.7e-28	32.54	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G37220.1	4.5e-25	38.20	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 295..372 e-value: 5.3E-14 score: 62.5 coord: 195..268 e-value: 1.9E-24 score: 97.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 296..357 e-value: 8.9E-15 score: 54.3 coord: 196..266 e-value: 1.3E-17 score: 63.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 194..272 score: 17.642843
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 294..374 score: 14.658149
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 168..274 e-value: 1.7E-24 score: 88.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 282..379 e-value: 1.8E-18 score: 68.8
None	No IPR available	PANTHER	PTHR48025:SF4	30S RIBOSOMAL PROTEIN 2, CHLOROPLASTIC	coord: 115..359
None	No IPR available	PANTHER	PTHR48025	OS02G0815200 PROTEIN	coord: 115..359
None	No IPR available	CDD	cd12399	RRM_HP0827_like	coord: 195..272 e-value: 5.97704E-32 score: 115.403
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 194..358

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr019771.1	Sgr019771.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding