Sgr027733 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr027733
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	protein DCL homolog, chloroplastic-like
Location	tig00153055: 2135828 .. 2148344 (+)
RNA-Seq Expression	Sgr027733
Synteny	Sgr027733

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCGAAGACCAACACAAGCTACCGAAGCGACGTGAAATATTGTCAAATCCAAAAGTTTTCTTGAATAGAAATTTCACTGCACTACTTTGAATACCCATTAGATTGCTGCATATCTGATTAATGGATGTTCACAAGATCATGGGATTCTGGGGAGGAATGCAAAGGCCAACACAGCTGCTTGAGGTCACAGGCACGTTACTTTTAGGCTGCTAATGGAGGGAGAAATATCAGACCTTCTTCTGCATCTTCCGCTTGAATTTGACTCTTTTGTTTTTTTTCTTCCATTGATTCTGCAGTTGTTGGATGCTACAACTTGGAGGACAGATGGCCGGTTGCGACCGAATACTCCTGCGTCCTTCTTGAATATGGTGGTTCCACAAAGAGGACCAAGCCATGCCAAGGTATGTGCTTTGTATTGTCTTTGTTCTTTCAAGCTTCTGGGTTTGGATTCAAATGAAATCACTCTGAGTTGAATGGTTAGGTGGAGGCAAACACCTTGTGTTCGAGGAGAAAGTTGTTTTCGAATTCACTGAAGGAGTTCGAGAACTGAAAGTTGCAGTCTGGACCAGTCAACCCCCAGGAAACGATGGAGTCATTGGCTTCCTGAGGTATAAAACTCAGCCTTCTGATGAGCTATCAATTCATTTTCAATTACCCTTTTTTTCTCTCTCTCTCTCTCTCTCTATGTTTCCAAGATATGATTTTGTGATGATATATAACAAGCTTGCTCGTCTTTAGTGTACAGCTCCAACAAGTCCTTTCCGATGGTTATGTTGACTCTACCTGGACTTTGCAGAGGAAAGATGGCAGGTACAAATTCATTCGACAACAGTTTTACGATCATCTTCTTTTCTGGGTTATTTGCATTGTTTCGCTGTAAACTAAGTTTGCTTTCATGGCAGGCCTGCAGGCCATATACGACTCATATTGCAATTTCCCAGTTCCAGTTCTACAGTAATCTCCATCTCTTATATTTCTTTATTGACCAAACGACAAGCTATAGTTGTTTCTGCAATCTATTTTTGCGCTCCCTTGTTTACATTCATAGTTTGGTGCAGTTTCAACGACAAAACTCAAGTTACACTGCGCCATCGTTGAATTCTGCTGCTCCTCTGACACCCAATACAACCCAACCGCCAATATTGTCCCAACTCCTACCGTATGATTCCTTTCGCCGACGTCGCCGGCAGTTCCTCGGCCAAATGCTACATATCCTTGCACCACGTATCCTCCCAACTCAGCTCCGCCACCACAACCTCTGTACCCTCCCACTCAGCCAACGCAACCGAATGCCACCGGACCGGCCGCTCTATGGTCCCAACTCCTACCGTATGGTTCGTCTACGGCGGCAGTTCCTCCACCAGCTGCCCCTGCCTACAATGTTCCATATCCTTCAGACCCATACCCTAAGACTCAACCAACGAGCAGCTACTGTGCAAGCACCAGCCCGCCTGCAGGATACCCTCGGAATCCTCATCCTCATCCTCATCACCGTCAGTACCCAACTTATCCTCCGACCCCACCAGGTACATTTTCATTCTTGATTGTTTTTGTTATCATCCGCTGTTCTGATATTCAAACTAAAGCTTAATTGGGTGATTAAATTTCGGTGAACTTCTTCAGGCCCGTCGTCTAATATTTACCCGCCTCCATCGCACTGACGACTGACCTGACGTTGTCTGCCCAAAGAAAATAATACTGCGGTGTTTTCTGTGGGGAAACAAAATGTATCAACTCCCATTGGTTTTGCACGAAGAAGCAGTCGGTTTTGATTCAAACGTTTTTGTTAAATATAAAGCTGTAATAGTTGCACCAAAAAAAACCTTTTTAAATGCTCAAAAAAAGAAAAAATGGTGGGTATTTAATTCAATTGTGATGTAAAACTGTAGTGTTGGTTTTTAGCCGATGTATTATATGATTTTGACAAGGATGACTCTCATTAATGACATCAATAAGTTGATTTTGATTCACTGTTTGGAGTAAAAATTGAACTTTTCCTAATAATTAATTAGTTGGACTGCTGTTACAAAAGGATTCAAACGAAGTTGCTTTAAAAGAACCATTTATTTCCTTAATTGCAGAAGAGGAACTTAATACATTTGACAAAGATCCACTCTTAGATTTTTCCGGTATGGTTTCCTGGTTTAGACGTAGGGCACTAATGTCTGGACATCATATCATCTACTTGAAAATTGATAATCCATCATCTCAAAACTAACAAAATATTAATTCAATAACCAAAATCATTTTCTGTCAAAAAAAAAAAAAACCATCATCATTTAGATTCTGTTTAAATTAATTTGATAACCATAATCGTTTAGATTCTGCTTGATCATGCTCTTGATCTTGATCATTATGTTTAGATTCTGCTTGATCTATCCTGACATATATAGAACTTGTTATATAAATATGTCAAGAGTTGAAGAGTTCATCTTGTCAAAAAAAAAAAAAAAATGATTGAAGAGTTCGAAAACGTAGCCTTCGATTAATAGAACCTGTTTTACGTCTCTATTTATCCTAAATATTTTATAAATTTATTGTAATTTGAAAATTTCTATAAATCTAATTTGTTTAGTCCTACATTCATTTTAGAGCTGTTAAACTAAATCCAACGTAGTTTTTGATATAAAAAGGCTTCTTTTTTTTGTCACTTATAAAAAGATAAAAAGGTAATATTTTTTAAAACAAGAACATTGGACTAATAAAATTCAGACTAATTTTACAATTATTTTGAATATTTTACATTTTATAAATATTTTAGAAACCAAACTACGATTCATAGAAAAGTTCAATTTTTACCCTTGAACTTTAGGTAGTGAGTTGATTTTAACCTTAAACTTTCAATTTCTTCAATTTAATTTAGACCTTTAATTTGAATAAGTGTTGCAATTAATATCTCTTAAAAAATAAATTAGAAAACTGTAATACCTCTTCAAAATAAATTATAAATTGCCCAAGAATCAACTAATAAATCATACAAAATTCAACTAACAAAACCAACCAACATCATGTCACAAAAATACCCAAACTCAATCATGAAAATACTTAACATAGCCACAAAATCAAGTAGATAAAAAACATTCAAACTTAACAACAAAATGCCTAAATCTAAGTAATTAAAATCATCCAAGACATTGGAAGAACCTATACTTGCAGAAATAGTCTCATCTAATCATAAGAATACTTATAGCTAGTCACAAACCTTTAAAAAAATGAAAATTTAATTAATTGATGGTGTTATTACACCACTTATTCAATGTAGAGTTTAAATTGTAACCTTATTCAAATTTCAGGTTTAAATTGATAAAATTAGAAGTTTAATGTTAAAATGACTCTATGACCTCAAGGGTAAAAATTAAACTTTTCCTTCCAAATATCATTGAAATGAGCTGGGCCAAGTTTGTTTAATGGGCCATGTATTGGGCCCAAGTAAATAAGCCATTGGGAAATTTCCATAGATACCCCATAGGGTTAAGGCATTTATCCATATTGCCTCTACCATCTAATTTCTTCTAATACTATCCCTACAATAGAAAATAATGTTACACACACACACACACACACACACACACACACATATATATATATATATATAAATTCAAATAGCTTTGTAAATTAAAATCCACCATCTAATAGTCTGGATACTCAAAATCAGCACTTAAACCATGATTAAACTTATTTCGACGTTACAGAATAGGTTCCTAATGGAAAAAATCCTAGTACACTCGAATCAGTAACCTTAGTTCATGGCTTAACAACTCCAAGCTCGTTTGATTTTACAAGTACTCTTTGTTCTACATTCCTTCATTATTATGTTTATTTCCCTCTTCTTATAACATTCCAACCTCAACTTTTCTCTATAAAACATTGATATTTGATAACTTCAAACCAAAATAGTTTCTACGTGAATCAAAGCAATGCTTGCAATAATTAAAAAACTAAAAAGAGGCTGCTTTCGAACCAAAGAAATTCCAAAAAAGAAAAAAATTAGTGATCCTTTTATTAAAAAACAAACCTAACGATAATCTTTCACCTCATACTACAGAATAGGCTCCTAATATTAAAATTTTTGCAAAGAAAAAATAGCACTCTGCAATCAGCATCCTTCAATCCTAAGTCATGTCAGCTTCAAGTTATGCATATGACATGCTAGCATCTTTTAGGGAACACTTAATGAACATTTCTCAATACTTGATGAACATTTCTCAATACTCAGTTCACTTACAAAGAGTTATTTCTGGCGGAACCAGTGATGATAAGGGTATCTAATATGTGGTCTTCACTTGTTTCCTGTCGTGTCATGTCTACACTTTCTCCCTTGCACATGATAGCTTTCTATGCAGCTGGCACAAATGCTAGTTGTTGTATAGACATTGTAGTGGTTAATTGTTACACAGGACAATGTAATCTGAGAAAAAAGACTACACAATACAAAATATTAATACAAAGACAAAAGGTGAATTCTACAGTTTACGACTTGCTGCTCCTTCACCTCTGAAACGGAATCATGATTTAAGACCGCGAACAAAACCGTCCTAAATGTCCTCAACCATTTCTTGAACTACAACGACATTGTACTGTGAAAAAGATTCATACAATAATCAGACTAAGACCTCACAAGAGTTACCGCACCAATAAGATCCAATCCAACCACCTCATATAAATTTGCTCCTTGTGGGGGGACAAGCACCAGTTTCAATTCAAGCAAATATTAATGGGCTAGACGGCCTTACCCGTCTCTGTTATATTTATGTTGCAACTTACATCAAATTGTCTTAAAAAACAAGCAAACGGAGTTGCAATGTTTGACCACAGGACAAACTTGTAGGTCAGCATACTGCAACCCCATACCGGTCAAATGCATTAAAATACTCCCATAAATGCGGGCGAAGGGTTTTTTTTAATGCAGTATTGTCGATAAAGCGAACAGATACAAAGAAACTTAATAAAAATTTCGTGTATCAACAATGCAATTAACAAGAGGGGCAATAAAACCAACAAAATCAGGATGATATCTAAACTTCCCACCAAGTAATTTCATTGCAGATTCCATGGAAAAGCTCCATTTAGTCTCAGATGCAACTTTCCGTTAGGTACAACTTCATATACATCCAGGTAAAGTAAATACATGCTTCAAGTCAACGATACCTTCACAATTGAACACACAAGCAGAATTGAGGAACCCTCGATCTTCCGGTGAACAAATGAGTCCCCTATCACAGTTCCACTGAAAACGATAACAAATCTCTATGGAACATAAAGTAAAGTAAGCTGGAAGCTACCTTTATCTCCTTTACATAGAATCTTGTCAAAAAATTTCGGTGGTGATTCTTCACAAGTGTTAATGATGACCCAAATAAGATGGAGACGAATACACGGATCAAACATTTGAATATGGCAGAAGCCAGAAGGCAATGTTCTTTTTGTTTCTCCAAGATTAGAAACTGATAATATAGGCATCATCAGCATGTCGCCAGACTTCATAAAGATGCCATGCTAGCCTCCATTTGTGGATCAGTTCATAAAGGATGATAAAGCAAGTAATTCTTCCCAATTCCAACTAAAACATCTAGTGGAGTGATCATTTCACTAGTAGGAAAATGGTGTCATGTCTAGTATACTGAAACAAGCATATCAAAGGTCTTCACAACCACATGAGAGTAACTGGGCATGGTCAAGGCAGCACGGTGAGAAAGATAGTGAATACCGTGCATAAAACCATGTTATGTTACTGAAAATGGTCAATCAAAGAAACGAAGATTTATTGTCAAATGGTCATCAAAGAGAGGCACTCCCCACAAGGGGCATTGTTATAGCATTTAAAGATCTTAAGGAATGTAAAAGTTTTCTAGGTGCAATACGGCATTGACATTTTTTGAAAATAATCTTATACCTTCTAGGATGTTCCTGCAAGGGTTTGAAGTCGGATTCATAGCTACAAGAGTGTCTACCAATTACACCAGATATTTTCAACACTTGTCAATTAGTGGCGTGAAATTAGTAGACTCTGTCATGCACTAGACATCTATCATTAGCAAAGATTCCACATTATAAGAAAAAAGCGAGGAGCATGAATATTTGATTCCAAGACGAGCAATAAGCAGAGCACACAGCATGAAATTAAATACACTAAACACGGAATCAAGGCAATACAACCACAAAACAATGCAAAAGAACAAGACCAGAAGCGTTTATGTTTTGCAACTTGCTTCGTTCCTGATGTCTAATTATTAATTCGAGAACTGCTATTACCACCGGACCACCTTCTCAGTGTACAAGCAACTAAACCCCGCCCCGCGAAAAGGCCTAACCTTGACTTTAGTGACGAAGACCGCCCAGCACTACTTGATGCAATCATAGGAGGAGCAACTTGACTTGGAATCGGAGGAAAATCAACAACATTATCCTGCATCCCGCCATCACTTGCACTTGCATCCGGATGTTCAGGTTCACCACTGTCTAAATTCACGGCAAGCGATCCCCTACTCAACCTCAACGAATCTGCACCCTCGGGAGTTACTCCTCGACATTTCTTAACCTTCACTTTCACCAAATTTGGGCACCCTTCGGCAAGGGCTTCCATACCTTGATCAGAAACAGGACAACTTTTAATGCAGAGCTTTTTCAGTGCTATGCATTTTGAGGCAATGCATGAGATTTCGTTATCACCAACGGTATCGCTTCCACATAATGCCAACCGCTCTAAATTTCGGCAATTTGAGGCCAACATTTCCAGGCTTACGTTTGTGGGATTCACTCCGATGAGAACCAATTCCTGAAGGTTAGAGCAATTTTTGGCAACCGCTACTAAACCATCGTCACCAATCCTATTCGCCTTCCATCCATCAATGTGCAGCTTCCTCAAGAGCTTGCACCGTTCTGCTATCGCTACAATGCCCAGGTTGGTACACTCGGGGGTCTTAACGAGGTGCAGAATTTCCAGATCCAAACAATTCGAGATCGCTGAGAGGCCTACATCACTTACCTGAAGCCTTTCGAGATGGACTTCAACAAGACCAGTCACTCGGTCTGCTATAACTTTGAGCAACGTATCCCAATCACCTGAGCATCGGAAGAGTTTCAAAGTCCTCATATATTTCGCACCGATTACTAGCGGTCCGAAACATTGTGCATTGTAAAGATCTTTTAAGCAAATAGTTTTGAGTGATAACCCAGCTACGCCCGGCCCAATCGGCTCAGCAGCCGATTCAGTGATACCACGAAGCCGCTTCACTGATAATTCTTCGAGGGCAGAACAATTATCAAGAACTGCGTTCATTCCTTTGGCTCCAAATGTGCAAGATCCGCACGAGAGTTTTTTCAAACCCTTGCAGTTCTTGGCAAAAGCAGCCATGCCGACATCGGTCAATTCACGGCACGCACGAAGTTTGAGACGAGTCAAATTACGGCACCGAAGGGAAATGAGAATAAGCGCGTCGTCTCCGATGCTCGCAGATCTGCGGTCACACTTCAAAGCAAGTTTGGTGACGGCATCGAATCGAGTAAAGAGGGAAGGTATCATGGAGGAAAGATCTGCTTCTGCTTTAAGGGAGAGACGGTGACGGCTTTGTCCCTCAACTTTGAGCCAGCGCCGGCATACGAGAGAGCAGCCCTTCCGGTCGACGGAGCTAAGGGATTGGAAAATGCAAGCCAAGCACTCATCTGGAAGATCGGAAATGAAGTCGGAGGCTCCATGAACGATTTCCTGGAAGTCATCGGTTTCGTCCAGGTGCATCGGGGAGATCAAAGCCGTTGATTTGATCTTAGATCGATGGCTGTGATTGCTATCGCGGCGGCTAAGGATCGCAGCCGACGAAGCTGATTGGCCCATTCAGGGCGAGTTGAAGAAGGAATAATCTCGGTTTGAGCCCTTGGATTATTACCGATCATACGCAGGCAGTAGGCCGGAGTAGGTTGAGGGGCTCGGACGCCGTTGCTCAGTTGATTTCCGTTCCGGAGAGAGAGAGAGAGAGAGAGAGGGGAACAAGACGACGGACTTGAAAATAAATTCCAATTGGGCTTTTTGGAAAGTTTCTTTTATTTTGTTTCTTTTACAACTTTTTTGAATAGAATAGTCACCTCCAGTGTAAGAGAAAATGCGCAGCGGGGCGACCTCACGTGGTCTTCGTGGACTCCGATCCCCTGGCCCCTCTCTCCCCTGCGCTCACTATTTAACCAAACTTTGAATCCCTCTGCCCTCCTCTTTTCTAAAAAGAAAAAAAATAGTGCCCTTCTTCTTTTTCTTTTTCTTTTTCTTCCACTTCTGCAATTTTATACAAATAATCATAATGTAAATTAATTCATTTTCTTTTTAAAAAATACAGCGTTTGAAGCTATGCTACGTACCAAATCCGAGTTTGAAAAAGATAAAGATCCACCTGGAAAAGAGAAAGATGATTATGAAAGTAATAACTTTCCAAATCAATTTCATCCTCATCATCAATATTAAGTAATCTAATCTGACAGTCTATTCGTTTGTAATGTGAAATGGGCCTAACGGAGTGTTTCATCTTGGGCCCGTCCAAAATCATGAGGAATTGCTGCTACAGTCCCACAGGGCCCAATGCAGAGCTCCCAACAGAACAGACGAATGGAGCTTCGTTTACTCACTTCCCGCTCCAGCATAGACTTCACATTCCACCCATTGCTCTCCACATGGATATTTGATACTATGGCTGCTTCTTTGCTACTCAGGGGCATCCTCTCCTTCGGTTAGGACTCAGGCACCGCGGGCTATGTATTCGGATCGTACAGGTGCCTCGTCGGTCTTGTTGCACTGCGACGGCGGCGTCTACTCCACCAGACGGCAACGTAACATCTGCTGACAATACCACCGCAGTCTTGAGTGCCAGTGACCCACCCAAGTACCCAAGGTGGGATGAGCCTGATTATCGAAAGTGGAAGGACCAGGAAGAGGAAATTCTCAGCGACATCGAGCCTACCGTATCCCTCACAAAAGAGATCCTCCACTCCAATAGGTTTGTCCTGTTCTCGCAATTTACCCGGAAAGTTGATACTCTATATTATAGACATTATGTGTTTGCGTTTTAGTTGCTGAGAAACTCTGCGATAAAATAATGAAGGAAAAATGTGATTTCTTTATGAAGGACTGCTAGAAAAGAACCTTTTTAGCTTCGAACATTATATTATATCAAAGCGTAGATTTTTCTGTCTAAATGGAGACGACGCTTTTAGTTAAAATTCACAGACGGACATATAGAACATGTTTTGAGTCAAAACGTAGTAAGAAATTTCATTTAAAAGAAACCAAAGCATTTCCATCCAAGAAACATCTAGAATTCCCTTTACCCTTTACCCATGATAAATGTTCCTGAATCTATCTTCAGAAGTCGATTGGGTTAGATGGGAATGGGAAAGTACGTGAAAAGTCAACATGAAGCGGACACAATAACTTCTTAATGGCTGACTATCAGTTATAGGTTTTCTTTACTTCTAATTTGACTCAATTTGAAATGATATCTAGTATGTTTTTCATGGCAATGTGATAATCACTTTCGTAAGTCAACTCCCGCGATCACTTTAATTGGATCACTTGATAAATAGCACAACGCATTTGATATTTACATATGTGACCCTAGATGTTGAACTTTTTCAACAATAATAGCAACTACGGATATGCTTTCAAATACAATATATTAGAAAGAAAAATGAATATTGGAGTTAGGTTTAATGTCAGTGTGTTGTATATGCCCTTTCTTTGTTTTCTTTGTGGATTTGGGATCTGACGACTGTCTATTGCCTGAGCAAAGAATAAGGAGTGTGCCTTTGAGTTTACTTTATTGCATCAGAGGAGAATACTTCTCCATTATGCGTCAATTGTCATCTGCGTGCTTGTAGCTGAAAATTTGAAATTGTGGATTAAAGAATTTTATTTCTTGATTCTCACCCTCATCCTGTTCTTTTCATTCGGTCAATAAACCTAAGAATTAGATCCCAGCGAGAAAGGACTTGCAATATAAAAAATGTGGTTGTGACCTTACTAAAGTATTGATTGCAATGTAGAGCTTAGACCAGATCTTCACTACTGGTATATATGTAGTTTTGGAATGCAGGTGGTATTCTGATCTCTCTAGAACATGAAGTGCCTTCTTAATTAATGGGCTCATCTTTCAGTTTTAGGTTCCCCCAAAATTTTCTATAATGAAGTCTTATCTCCTTCATTCGATAAAGTATGAAAAATAACTTAGCTGGCATGACTACAGAGTTGTGCTACCATGATGTTTTTGCTCAGCACTATGTAGCCCTTCTGCACATCACTGCTTAACTACACGCTCACATAAGATTAGTTTATTGTTTTTTTGCGATCGTCAATTATGCTTTTAAGCTCAAACTTTTTGGTCTATGTGAAGTTATATTGCCGTTTGACAATCTTGAATTCAAACTCCCAAATTTTGGTTTTTCTAACGGTAATTGATTTGCATGTTTATTCTGCTAACTCTTTTTGGTGTATCAGCTAGTTGGTCTATAATTACTGATATTTTTTTTCACTGGTAATTTGTTCCAATTCCACCCCCCCCCCCCCAATTTAATTAAGTTAATTGGTAACTAATATTATCTTAGAGACTTGATTAACTGAGAAAACCAGGCTGCTATATGTATGTTTCATGCTCTTGCCAATTTAATCCACTGAAATTGGGCTCCTTATTGATGGCATCCTTGCAATGGATATTTGATAGAATTGAGAGACCCCCGATCAAATACGGAAAAGAAAGCCTGAGGCTTGCCTATTTTTCCTTTTATTTTGTGCTCTTCGGGATTAGTAGACTCAGATTTCCATTGAAAATATTATCAATATTTCTTGACACAAAACATTTGCTAGGTTTTCTTCCATTTGGTTGCTTACTGGAGTCATGCTTGTAATCTTTATGCTCCTCTTTGAGCTTTTCTGTGAATTGATATATTAAACTTTCTTGTCCAATCATGTTATTTTATCTGTTTTCATTCATGATAGCTAGGTCATGTTTCTATAAAGGAAAAAGAAACACTAAAAGATCTTCCTTGGGGGAAAGAACAGGTGTTGTATTCCATTTTGAATAGTATTCAATGCATAATATTATGGCAATTAAGATCAGAAGTTATGTTCAGTGAGAACTAGTGGATGACTATGCACTTTTAACTGGTAAAAGCAGTGCTTTCCTCAATGTAGGGTAGGTTGCCAGGTTGCCATGTTCATGAGTTGGTCTCATTAGGCACTTTTCCATATAATATATGGCGCATGATTTTGTTTTACAATTACACTTAGCTCCTATGATATTATGCCACCTTACTTAAGGACCTCGATTTTTGATACTAGGTATGTGGATGGGGAGCGATTGACATCTGAGGACGAGAAAATTGTGGTTGACAGGCTTCTTGCTCATCATCCACATGCTGAAGATAAAATTGGATGTGGGCTCGAATCCATTATGGTATGCCGTATGCTTTGCTGCTGAATTAAATGGTTTAGAGTTCTTACCATGTGTCATATTGCTTACTTCACCTGGTCACTCAAGTATCAAATATGCAGTTTGCAAGGTTTTTTTTTTTTTTGTTAGGTCGTATGGAAGTAAAGCAGATAAAGAAACAAATGACATTTGGTATATGGATATTTCCAAAATTTCAAAATACAATTGGTGACCTCTACCTATACTCTAAAGGCCGTACAATAATTAATTTCTAACAAATTCACCCCTGTAGGCTATATGTGATAGACCTCAGAAAGTAGCTTTTTTTTTTTCTTTTTTTTTTTTTGTTGGGTAGGAAGATCTCATGAAGTAGCTTTACTAGAAGTCCAAGCATGTTAGCAGGATGAAAGACATTGTTGAGTGCAGCTGCATGGACTTCATGCTTGTGAGCTCCATGAACCTTGTGAAATGAATTGGACAACTCTAGCCCTCAAAAATGATTGGGAATTGTGAGAATGTGATAGGAACCAAGCTGATATTAGCCTTGAGATAAGAAAGGATTACAAAAGTTGGGGAAGAAATTTTGAGATCCCCTAACTCTCTCAATTCCAAGCTACTCGGAATCTGACGTGAAAGTCAATCACTTCTGCTATTCCAAACTAGTCTTGGTTAGCAATTCCAGAGTCGATTACAAATGAAAAATTGAGTAATTTCAAAAGTCTGCCCTACCAATTATTAGCTAAACGGAGCATAAAGATAGAGGTTGAAATTGTGAAATAAGTGCAGGGGGAACTAAGTTAAATGACAAAAATAGATGGTAGGGAGTTTCTGGCTCCACTTCAGAATCTTTACCAAAATACTTGCCTACCTCAATTCTCTAACTCCTTAATAACTACGGCTCTACAATTGCCCTGGTTAATGACTAATTTGCCCCTAATTACATTTCTAGCACACCTCCTCAAGTTGCTGCCCGTGTGGTTCAAGTAATGGCCTCCAATTGACACCCAACTCCTTCCCAATAAGGGGCACATTTGAAGTGTGCTTGAAGTCAGCAAGCAAGACCATATTAAGAGCAGCTCATACCATTCTAACACTGAAGCTTCTGTGA

mRNA sequence

ATGGATCGAAGACCAACACAAGCTACCGAAGCGACATCATGGGATTCTGGGGAGGAATGCAAAGGCCAACACAGCTGCTTGAGGTCACAGGCACTTGTTGGATGCTACAACTTGGAGGACAGATGGCCGGTTGCGACCGAATACTCCTGCGTCCTTCTTGAATATGGTGGTTCCACAAAGAGGACCAAGCCATGCCAAGGTGGAGGCAAACACCTTGTGTTCGAGGAGAAAGTTGTTTTCGAATTCACTGAAGGAGTTCGAGAACTGAAAGTTGCAGTCTGGACCAGTCAACCCCCAGGAAACGATGGAGTCATTGGCTTCCTGAGTGTACAGCTCCAACAAGTCCTTTCCGATGGTTATGTTGACTCTACCTGGACTTTGCAGAGGAAAGATGGCAGGCCTGCAGGCCATATACGACTCATATTGCAATTTCCCAGTTCCAGTTCTACATTTCAACGACAAAACTCAAGTTACACTGCGCCATCGTTGAATTCTGCTGCTCCTCTGACACCCAATACAACCCAACCGCCAATATTGTCCCAACTCCTACCGTATGATTCCTTTCGCCGACGTCGCCGGCAGTTCCTCGGCCAAATGCTACATATCCTTGCACCACGTATCCTCCCAACTCAGCTCCGCCACCACAACCTCTGTACCCTCCCACTCAGCCAACGCAACCGAATGCCACCGGACCGGCCGCTCTATGGTCCCAACTCCTACCGTATGGTTCGTCTACGGCGGCAGTTCCTCCACCAGCTGCCCCTGCCTACAATGTTCCATATCCTTCAGACCCATACCCTAAGACTCAACCAACGAGCAGCTACTGTGCAAGCACCAGCCCGCCTGCAGGATACCCTCGGAATCCTCATCCTCATCCTCATCACCGTCAGTACCCAACTTATCCTCCGACCCCACCAGGCTTACGTTTGTGGGATTCACTCCGATGAGAACCAATTCCTGAAGCTTCCTCAAGAGCTTGCACCGTTCTGCTATCGCTACAATGCCCAGGTTGGTACACTCGGGGGTCTTAACGAGGGCAGAACAATTATCAAGAACTGCGTTCATTCCTTTGGCTCCAAATGTGCAAGATCCGCACGAGAGTTTTTTCAAACCCTTGCAGTTCTTGGCAAAAGCAGCCATGCCGACATCGGTCAATTCACGGCACGCACGAAGTTTGAGACGAGTCAAATTACGGCACCGAAGGGAAATGAGAATAAGCGCGTCGTCTCCGATGCTCGCAGATCTGCGGTCACACTTCAAAGCAAGTTTGGTGACGGCATCGAATCGAGTAAAGAGGGAAGGTATCATGGAGGAAAGATCTGCTTCTGCTTTAAGGGAGAGACGGTGACGGCTTTGTCCCTCAACTTTGAGCCAGCGCCGGCATACGAGAGAGCAGCCCTTCCGGTCGACGGAGCTAAGGGATTGGAAAATGCAAGCCAAGCACTCATCTGGAAGATCGGAAATGAAGTCGGAGGCTCCATGAACGATTTCCTGGAAGTCATCGGTTTCGTCCAGGGGCATCCTCTCCTTCGGTTAGGACTCAGGCACCGCGGGCTATGTATTCGGATCGTACAGGTGCCTCGTCGGTCTTGTTGCACTGCGACGGCGGCGTCTACTCCACCAGACGGCAACGTAACATCTGCTGACAATACCACCGCAGTCTTGAGTGCCAGTGACCCACCCAAGTACCCAAGGTGGGATGAGCCTGATTATCGAAAGTGGAAGGACCAGGAAGAGGAAATTCTCAGCGACATCGAGCCTACCGTATCCCTCACAAAAGAGATCCTCCACTCCAATAGGTATGTGGATGGGGAGCGATTGACATCTGAGGACGAGAAAATTGTGGTTGACAGGCTTCTTGCTCATCATCCACATGCTGAAGATAAAATTGGATGTGGGCTCGAATCCATTATGCACACCTCCTCAAGTTGCTGCCCGTGTGGTTCAAGTAATGGCCTCCAATTGACACCCAACTCCTTCCCAATAAGGGGCACATTTGAAGTGTGCTTGAAGTCAGCAAGCAAGACCATATTAAGAGCAGCTCATACCATTCTAACACTGAAGCTTCTGTGA

Coding sequence (CDS)

ATGGATCGAAGACCAACACAAGCTACCGAAGCGACATCATGGGATTCTGGGGAGGAATGCAAAGGCCAACACAGCTGCTTGAGGTCACAGGCACTTGTTGGATGCTACAACTTGGAGGACAGATGGCCGGTTGCGACCGAATACTCCTGCGTCCTTCTTGAATATGGTGGTTCCACAAAGAGGACCAAGCCATGCCAAGGTGGAGGCAAACACCTTGTGTTCGAGGAGAAAGTTGTTTTCGAATTCACTGAAGGAGTTCGAGAACTGAAAGTTGCAGTCTGGACCAGTCAACCCCCAGGAAACGATGGAGTCATTGGCTTCCTGAGTGTACAGCTCCAACAAGTCCTTTCCGATGGTTATGTTGACTCTACCTGGACTTTGCAGAGGAAAGATGGCAGGCCTGCAGGCCATATACGACTCATATTGCAATTTCCCAGTTCCAGTTCTACATTTCAACGACAAAACTCAAGTTACACTGCGCCATCGTTGAATTCTGCTGCTCCTCTGACACCCAATACAACCCAACCGCCAATATTGTCCCAACTCCTACCGTATGATTCCTTTCGCCGACGTCGCCGGCAGTTCCTCGGCCAAATGCTACATATCCTTGCACCACGTATCCTCCCAACTCAGCTCCGCCACCACAACCTCTGTACCCTCCCACTCAGCCAACGCAACCGAATGCCACCGGACCGGCCGCTCTATGGTCCCAACTCCTACCGTATGGTTCGTCTACGGCGGCAGTTCCTCCACCAGCTGCCCCTGCCTACAATGTTCCATATCCTTCAGACCCATACCCTAAGACTCAACCAACGAGCAGCTACTGTGCAAGCACCAGCCCGCCTGCAGGATACCCTCGGAATCCTCATCCTCATCCTCATCACCGTCAGTACCCAACTTATCCTCCGACCCCACCAGGCTTACGTTTGTGGGATTCACTCCGATGAGAACCAATTCCTGAAGCTTCCTCAAGAGCTTGCACCGTTCTGCTATCGCTACAATGCCCAGGTTGGTACACTCGGGGGTCTTAACGAGGGCAGAACAATTATCAAGAACTGCGTTCATTCCTTTGGCTCCAAATGTGCAAGATCCGCACGAGAGTTTTTTCAAACCCTTGCAGTTCTTGGCAAAAGCAGCCATGCCGACATCGGTCAATTCACGGCACGCACGAAGTTTGAGACGAGTCAAATTACGGCACCGAAGGGAAATGAGAATAAGCGCGTCGTCTCCGATGCTCGCAGATCTGCGGTCACACTTCAAAGCAAGTTTGGTGACGGCATCGAATCGAGTAAAGAGGGAAGGTATCATGGAGGAAAGATCTGCTTCTGCTTTAAGGGAGAGACGGTGACGGCTTTGTCCCTCAACTTTGAGCCAGCGCCGGCATACGAGAGAGCAGCCCTTCCGGTCGACGGAGCTAAGGGATTGGAAAATGCAAGCCAAGCACTCATCTGGAAGATCGGAAATGAAGTCGGAGGCTCCATGAACGATTTCCTGGAAGTCATCGGTTTCGTCCAGGGGCATCCTCTCCTTCGGTTAGGACTCAGGCACCGCGGGCTATGTATTCGGATCGTACAGGTGCCTCGTCGGTCTTGTTGCACTGCGACGGCGGCGTCTACTCCACCAGACGGCAACGTAACATCTGCTGACAATACCACCGCAGTCTTGAGTGCCAGTGACCCACCCAAGTACCCAAGGTGGGATGAGCCTGATTATCGAAAGTGGAAGGACCAGGAAGAGGAAATTCTCAGCGACATCGAGCCTACCGTATCCCTCACAAAAGAGATCCTCCACTCCAATAGGTATGTGGATGGGGAGCGATTGACATCTGAGGACGAGAAAATTGTGGTTGACAGGCTTCTTGCTCATCATCCACATGCTGAAGATAAAATTGGATGTGGGCTCGAATCCATTATGCACACCTCCTCAAGTTGCTGCCCGTGTGGTTCAAGTAATGGCCTCCAATTGACACCCAACTCCTTCCCAATAAGGGGCACATTTGAAGTGTGCTTGAAGTCAGCAAGCAAGACCATATTAAGAGCAGCTCATACCATTCTAACACTGAAGCTTCTGTGA

Protein sequence

MDRRPTQATEATSWDSGEECKGQHSCLRSQALVGCYNLEDRWPVATEYSCVLLEYGGSTKRTKPCQGGGKHLVFEEKVVFEFTEGVRELKVAVWTSQPPGNDGVIGFLSVQLQQVLSDGYVDSTWTLQRKDGRPAGHIRLILQFPSSSSTFQRQNSSYTAPSLNSAAPLTPNTTQPPILSQLLPYDSFRRRRRQFLGQMLHILAPRILPTQLRHHNLCTLPLSQRNRMPPDRPLYGPNSYRMVRLRRQFLHQLPLPTMFHILQTHTLRLNQRAATVQAPARLQDTLGILILILITVSTQLILRPHQAYVCGIHSDENQFLKLPQELAPFCYRYNAQVGTLGGLNEGRTIIKNCVHSFGSKCARSAREFFQTLAVLGKSSHADIGQFTARTKFETSQITAPKGNENKRVVSDARRSAVTLQSKFGDGIESSKEGRYHGGKICFCFKGETVTALSLNFEPAPAYERAALPVDGAKGLENASQALIWKIGNEVGGSMNDFLEVIGFVQGHPLLRLGLRHRGLCIRIVQVPRRSCCTATAASTPPDGNVTSADNTTAVLSASDPPKYPRWDEPDYRKWKDQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHHPHAEDKIGCGLESIMHTSSSCCPCGSSNGLQLTPNSFPIRGTFEVCLKSASKTILRAAHTILTLKLL

Homology

[Close]

BLAST of Sgr027733 vs. NCBI nr
Match: XP_022135348.1 (uncharacterized protein LOC111007322 isoform X2 [Momordica charantia])

HSP 1 Score: 244.2 bits (622), Expect = 3.3e-60
Identity = 116/136 (85.29%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 504 VQGHPLLRLGLRHRGLCIRIVQVPRRSCCTATAASTPPDGNVTSADNTTAVLSASDPPKY 563
           ++GHPLLRLGLRHRGLC  IVQV RRSCCTATAA TPPDGN+TSA+N T+VLS+SDPPKY
Sbjct: 7   LRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKY 66

Query: 564 PRWDEPDYRKWKDQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHH 623
            RWDEPDYRKWKDQEEE+L+DIEP +SLTKEILHSNRYVDGERLTS DE+IVV+RLLAHH
Sbjct: 67  SRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHH 126

Query: 624 PHAEDKIGCGLESIMH 640
           PHAEDKIGCGLESIM+
Sbjct: 127 PHAEDKIGCGLESIMN 142

[Close]

BLAST of Sgr027733 vs. NCBI nr
Match: XP_022135338.1 (protein DCL, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 243.8 bits (621), Expect = 4.3e-60
Identity = 116/135 (85.93%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 504 VQGHPLLRLGLRHRGLCIRIVQVPRRSCCTATAASTPPDGNVTSADNTTAVLSASDPPKY 563
           ++GHPLLRLGLRHRGLC  IVQV RRSCCTATAA TPPDGN+TSA+N T+VLS+SDPPKY
Sbjct: 7   LRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKY 66

Query: 564 PRWDEPDYRKWKDQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHH 623
            RWDEPDYRKWKDQEEE+L+DIEP +SLTKEILHSNRYVDGERLTS DE+IVV+RLLAHH
Sbjct: 67  SRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHH 126

Query: 624 PHAEDKIGCGLESIM 639
           PHAEDKIGCGLESIM
Sbjct: 127 PHAEDKIGCGLESIM 141

[Close]

BLAST of Sgr027733 vs. NCBI nr
Match: KAG7037785.1 (Protein DCL-like, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 234.2 bits (596), Expect = 3.4e-57
Identity = 112/135 (82.96%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 504 VQGHPLLRLGLRHRGLCIRIVQVPRRSCCTATAASTPPDGNVTSADNTTAVLSASDPPKY 563
           ++GHPL+RLGLR+RGLC  IVQV RRSCCTA  ASTPP G ++SA+NTT+VLSA+DPPKY
Sbjct: 7   LRGHPLIRLGLRNRGLCTGIVQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSATDPPKY 66

Query: 564 PRWDEPDYRKWKDQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHH 623
            RWDEP YRKWK+QEEEILSDI+P +SLTKEILHSNRYVDGERLT EDEKIVVDRLLAHH
Sbjct: 67  QRWDEPGYRKWKNQEEEILSDIDPVISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHH 126

Query: 624 PHAEDKIGCGLESIM 639
           PHAEDKIGCGLESIM
Sbjct: 127 PHAEDKIGCGLESIM 141

[Close]

BLAST of Sgr027733 vs. NCBI nr
Match: KAG6608449.1 (Protein DCL-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 234.2 bits (596), Expect = 3.4e-57
Identity = 112/135 (82.96%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 504 VQGHPLLRLGLRHRGLCIRIVQVPRRSCCTATAASTPPDGNVTSADNTTAVLSASDPPKY 563
           ++GHPL+RLGLR+RGLC  IVQV RRSCCTA  ASTPP G ++SA+NTT+VLSA+DPPKY
Sbjct: 7   LRGHPLIRLGLRNRGLCTGIVQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSATDPPKY 66

Query: 564 PRWDEPDYRKWKDQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHH 623
            RWDEP YRKWK+QEEEILSDI+P +SLTKEILHSNRYVDGERLT EDEKIVVDRLLAHH
Sbjct: 67  QRWDEPGYRKWKNQEEEILSDIDPVISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHH 126

Query: 624 PHAEDKIGCGLESIM 639
           PHAEDKIGCGLESIM
Sbjct: 127 PHAEDKIGCGLESIM 141

[Close]

BLAST of Sgr027733 vs. NCBI nr
Match: XP_022940238.1 (protein DCL homolog, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 232.3 bits (591), Expect = 1.3e-56
Identity = 111/135 (82.22%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 504 VQGHPLLRLGLRHRGLCIRIVQVPRRSCCTATAASTPPDGNVTSADNTTAVLSASDPPKY 563
           ++GHPL+RLGLR+RGLC  IVQV RRSCCTA  ASTPP G ++SA+NTT+VLSA+DPPKY
Sbjct: 7   LRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKY 66

Query: 564 PRWDEPDYRKWKDQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHH 623
            RW+EP YRKWK+QEEEILSDI+P +SLTKEILHSNRYVDGERLT EDEKIVVDRLLAHH
Sbjct: 67  QRWNEPGYRKWKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHH 126

Query: 624 PHAEDKIGCGLESIM 639
           PHAEDKIGCGLESIM
Sbjct: 127 PHAEDKIGCGLESIM 141

[Close]

BLAST of Sgr027733 vs. ExPASy Swiss-Prot
Match: Q9C642 (Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DCL PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.0e-08
Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 576 DQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHHPHAEDKIGCGLE 635
           D E++IL    P V   + ILHS +Y + +RL+ E E+ +++ LL +HP  E KIGCG++
Sbjct: 99  DWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGID 158

Query: 636 SIM 639
            IM
Sbjct: 159 YIM 161

[Close]

BLAST of Sgr027733 vs. ExPASy Swiss-Prot
Match: Q42463 (Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.2e-08
Identity = 27/68 (39.71%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 570 DYRKWKDQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHHPHAEDK 629
           D   W D E++IL D  P V   + ILHS +Y  G+RL+ + ++ ++ RLL +HP  + K
Sbjct: 98  DGEGWVDWEDQILEDTVPLVGFVRMILHSGKYAIGDRLSPDHQRTILQRLLPYHPECDKK 157

Query: 630 IGCGLESI 638
           IG G++ I
Sbjct: 158 IGPGVDYI 165

[Close]

BLAST of Sgr027733 vs. ExPASy Swiss-Prot
Match: Q5D869 (DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-07
Identity = 26/74 (35.14%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 577  QEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHHPHAEDKIGCGLES 636
            +E+E+LSD+EP +   ++I+H + Y DG+ ++ +D+  V++++L  HP  E K+G G++ 
Sbjct: 1735 EEQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDF 1794

Query: 637  I---MHTSSSCCPC 648
            I    HT  S   C
Sbjct: 1795 ITVDKHTIFSDSRC 1808

[Close]

BLAST of Sgr027733 vs. ExPASy TrEMBL
Match: A0A6J1C4K2 (uncharacterized protein LOC111007322 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007322 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.6e-60
Identity = 116/136 (85.29%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 504 VQGHPLLRLGLRHRGLCIRIVQVPRRSCCTATAASTPPDGNVTSADNTTAVLSASDPPKY 563
           ++GHPLLRLGLRHRGLC  IVQV RRSCCTATAA TPPDGN+TSA+N T+VLS+SDPPKY
Sbjct: 7   LRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKY 66

Query: 564 PRWDEPDYRKWKDQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHH 623
            RWDEPDYRKWKDQEEE+L+DIEP +SLTKEILHSNRYVDGERLTS DE+IVV+RLLAHH
Sbjct: 67  SRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHH 126

Query: 624 PHAEDKIGCGLESIMH 640
           PHAEDKIGCGLESIM+
Sbjct: 127 PHAEDKIGCGLESIMN 142

[Close]

BLAST of Sgr027733 vs. ExPASy TrEMBL
Match: A0A6J1C4J4 (protein DCL, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007322 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.1e-60
Identity = 116/135 (85.93%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 504 VQGHPLLRLGLRHRGLCIRIVQVPRRSCCTATAASTPPDGNVTSADNTTAVLSASDPPKY 563
           ++GHPLLRLGLRHRGLC  IVQV RRSCCTATAA TPPDGN+TSA+N T+VLS+SDPPKY
Sbjct: 7   LRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKY 66

Query: 564 PRWDEPDYRKWKDQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHH 623
            RWDEPDYRKWKDQEEE+L+DIEP +SLTKEILHSNRYVDGERLTS DE+IVV+RLLAHH
Sbjct: 67  SRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHH 126

Query: 624 PHAEDKIGCGLESIM 639
           PHAEDKIGCGLESIM
Sbjct: 127 PHAEDKIGCGLESIM 141

[Close]

BLAST of Sgr027733 vs. ExPASy TrEMBL
Match: A0A6J1FNQ4 (protein DCL homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445919 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.3e-57
Identity = 111/135 (82.22%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 504 VQGHPLLRLGLRHRGLCIRIVQVPRRSCCTATAASTPPDGNVTSADNTTAVLSASDPPKY 563
           ++GHPL+RLGLR+RGLC  IVQV RRSCCTA  ASTPP G ++SA+NTT+VLSA+DPPKY
Sbjct: 7   LRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKY 66

Query: 564 PRWDEPDYRKWKDQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHH 623
            RW+EP YRKWK+QEEEILSDI+P +SLTKEILHSNRYVDGERLT EDEKIVVDRLLAHH
Sbjct: 67  QRWNEPGYRKWKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHH 126

Query: 624 PHAEDKIGCGLESIM 639
           PHAEDKIGCGLESIM
Sbjct: 127 PHAEDKIGCGLESIM 141

[Close]

BLAST of Sgr027733 vs. ExPASy TrEMBL
Match: A0A6J1J443 (protein DCL, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481165 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.4e-56
Identity = 110/135 (81.48%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 504 VQGHPLLRLGLRHRGLCIRIVQVPRRSCCTATAASTPPDGNVTSADNTTAVLSASDPPKY 563
           ++GHPL+RLGLR+RGLC  I+QV RRSCCTA  ASTPP G ++SA+NTT+VLS +DPPKY
Sbjct: 7   LRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKY 66

Query: 564 PRWDEPDYRKWKDQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHH 623
            RWDEP YRKWK+QEEEILSDI+P +SLTKEILHSNRYVDGERLT EDEKIVVDRLLAHH
Sbjct: 67  QRWDEPGYRKWKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHH 126

Query: 624 PHAEDKIGCGLESIM 639
           PHAEDKIGCGLESIM
Sbjct: 127 PHAEDKIGCGLESIM 141

[Close]

BLAST of Sgr027733 vs. ExPASy TrEMBL
Match: A0A6J1J4G4 (protein DCL homolog, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481165 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.4e-56
Identity = 110/135 (81.48%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 504 VQGHPLLRLGLRHRGLCIRIVQVPRRSCCTATAASTPPDGNVTSADNTTAVLSASDPPKY 563
           ++GHPL+RLGLR+RGLC  I+QV RRSCCTA  ASTPP G ++SA+NTT+VLS +DPPKY
Sbjct: 7   LRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKY 66

Query: 564 PRWDEPDYRKWKDQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHH 623
            RWDEP YRKWK+QEEEILSDI+P +SLTKEILHSNRYVDGERLT EDEKIVVDRLLAHH
Sbjct: 67  QRWDEPGYRKWKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHH 126

Query: 624 PHAEDKIGCGLESIM 639
           PHAEDKIGCGLESIM
Sbjct: 127 PHAEDKIGCGLESIM 141

[Close]

BLAST of Sgr027733 vs. TAIR 10
Match: AT4G34150.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-26
Identity = 66/156 (42.31%), Postives = 93/156 (59.62%), Query Frame = 0


Query: 32  LVGCYNLEDRWPVATEYSCVLLEYGGSTKRTKPCQGGGKHLVFEEKVVFEFTEGVRELKV 91
           +VGC  L+D    + +   V+LEYGG + RT+ C  GGK+ VF+EK +F   EG+R+LKV
Sbjct: 16  VVGCQKLKDTEWFSRQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTLIEGLRDLKV 75

Query: 92  AVWTSQPPGNDGVIGFLSVQLQQVLSDGYVDSTWTLQRKDGRPAGHIRLILQFPSSSSTF 151
           AVW S     D  IG  ++QLQ+VLS  Y D TWTLQ K GR AG ++L+L +  +    
Sbjct: 76  AVWNSNTLSTDDFIGNATIQLQKVLSQEYDDCTWTLQSKTGRFAGEVQLLLHYAGA---- 135

Query: 152 QRQNSSYTAPSLNSAAPLTPNTTQPPILSQLLPYDS 188
            ++++  +APS    AP  P  + PP  S   PY +
Sbjct: 136 -KKHNYGSAPSA-PYAPHVPQYSAPPSAS---PYST 162

[Close]

BLAST of Sgr027733 vs. TAIR 10
Match: AT3G46630.1 (Protein of unknown function (DUF3223) )

HSP 1 Score: 107.1 bits (266), Expect = 5.9e-23
Identity = 54/100 (54.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 539 TPPDGNVTSADNTTAVLSASDPPKYPRWDEPDYRKWKDQEEEILSDIEPTVSLTKEILHS 598
           +P +G+  +A N T+ +  +      R+++PDYRKWK+ E EIL DIEP   L KEILHS
Sbjct: 56  SPVEGSGAAAMNVTSPVVDNS----WRYEDPDYRKWKNLEAEILRDIEPISLLAKEILHS 115

Query: 599 NRYVDGERLTSEDEKIVVDRLLAHHPHAEDKIGCGLESIM 639
           +RY+DGERL  EDEKIV+++LL +HP+++DKIGCGL+ IM
Sbjct: 116 DRYLDGERLDFEDEKIVMEKLLPYHPYSKDKIGCGLDFIM 151

[Close]

BLAST of Sgr027733 vs. TAIR 10
Match: AT1G45230.1 (Protein of unknown function (DUF3223) )

HSP 1 Score: 62.0 bits (149), Expect = 2.2e-09
Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 576 DQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHHPHAEDKIGCGLE 635
           D E++IL    P V   + ILHS +Y + +RL+ E E+ +++ LL +HP  E KIGCG++
Sbjct: 99  DWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGID 158

Query: 636 SIM 639
            IM
Sbjct: 159 YIM 161

[Close]

BLAST of Sgr027733 vs. TAIR 10
Match: AT1G45230.2 (Protein of unknown function (DUF3223) )

HSP 1 Score: 62.0 bits (149), Expect = 2.2e-09
Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 576 DQEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHHPHAEDKIGCGLE 635
           D E++IL    P V   + ILHS +Y + +RL+ E E+ +++ LL +HP  E KIGCG++
Sbjct: 99  DWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGID 158

Query: 636 SIM 639
            IM
Sbjct: 159 YIM 161

[Close]

BLAST of Sgr027733 vs. TAIR 10
Match: AT2G40030.1 (nuclear RNA polymerase D1B )

HSP 1 Score: 58.2 bits (139), Expect = 3.1e-08
Identity = 26/74 (35.14%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 577  QEEEILSDIEPTVSLTKEILHSNRYVDGERLTSEDEKIVVDRLLAHHPHAEDKIGCGLES 636
            +E+E+LSD+EP +   ++I+H + Y DG+ ++ +D+  V++++L  HP  E K+G G++ 
Sbjct: 1735 EEQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDF 1794

Query: 637  I---MHTSSSCCPC 648
            I    HT  S   C
Sbjct: 1795 ITVDKHTIFSDSRC 1808

The following BLAST results are available for this feature:

BLAST of Sgr027733 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135348.1	3.3e-60	85.29	uncharacterized protein LOC111007322 isoform X2 [Momordica charantia]	[more]
XP_022135338.1	4.3e-60	85.93	protein DCL, chloroplastic isoform X1 [Momordica charantia]	[more]
KAG7037785.1	3.4e-57	82.96	Protein DCL-like, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG6608449.1	3.4e-57	82.96	Protein DCL-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022940238.1	1.3e-56	82.22	protein DCL homolog, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Sgr027733 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C642	3.0e-08	42.86	Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DCL PE=2 S...	[more]
Q42463	5.2e-08	39.71	Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1	[more]
Q5D869	4.4e-07	35.14	DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1...	[more]

BLAST of Sgr027733 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4K2	1.6e-60	85.29	uncharacterized protein LOC111007322 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C4J4	2.1e-60	85.93	protein DCL, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1FNQ4	6.3e-57	82.22	protein DCL homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1J443	1.4e-56	81.48	protein DCL, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1J4G4	1.4e-56	81.48	protein DCL homolog, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Sgr027733 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34150.1	1.1e-26	42.31	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT3G46630.1	5.9e-23	54.00	Protein of unknown function (DUF3223)	[more]
AT1G45230.1	2.2e-09	42.86	Protein of unknown function (DUF3223)	[more]
AT1G45230.2	2.2e-09	42.86	Protein of unknown function (DUF3223)	[more]
AT2G40030.1	3.1e-08	35.14	nuclear RNA polymerase D1B	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.40		coord: 582..653 e-value: 1.8E-8 score: 36.7
None	No IPR available	PFAM	PF11523	DUF3223	coord: 593..639 e-value: 9.7E-10 score: 39.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..173
None	No IPR available	PANTHER	PTHR33415:SF4	DCL PROTEIN (DUF3223)	coord: 504..638
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 31..146 e-value: 2.6E-11 score: 46.0
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 34..145
IPR044673	Protein DCL-like	PANTHER	PTHR33415	FAMILY NOT NAMED	coord: 504..638

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr027733.1	Sgr027733.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:1901259	chloroplast rRNA processing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003729	mRNA binding