Sgr025898 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr025898
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Isp1
Location	tig00153016: 1477836 .. 1478132 (+)
RNA-Seq Expression	Sgr025898
Synteny	Sgr025898

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACCAAGATGTGTGCAGACGCCAATCACGATAAGCCACTCTGGATCCTTAACTCTCTCACCATCCTGTTGTGGGTCGCGAAGAGATCCAATGTCCACACTATTTGCTAACTTGATATCGTCCTCAGTTCGTCGCCTGATGAATACTGGTTTTCCACGCCACTTAACGGTCACGGTGGAACCAGGCTCGATGCTTGAGAGGTCAACCTCAATTGAGGCCAGGGCAAGAACATCCTTACTGGCTGACATGCTAAGAACAAATTTGAGAACAAGGAGTCGAATCAGAGAAGCATAG

mRNA sequence

ATGCAACCAAGATGTGTGCAGACGCCAATCACGATAAGCCACTCTGGATCCTTAACTCTCTCACCATCCTGTTGTGGGTCGCGAAGAGATCCAATGTCCACACTATTTGCTAACTTGATATCGTCCTCAGTTCGTCGCCTGATGAATACTGGTTTTCCACGCCACTTAACGGTCACGGTGGAACCAGGCTCGATGCTTGAGAGGTCAACCTCAATTGAGGCCAGGGCAAGAACATCCTTACTGGCTGACATGCTAAGAACAAATTTGAGAACAAGGAGTCGAATCAGAGAAGCATAG

Coding sequence (CDS)

ATGCAACCAAGATGTGTGCAGACGCCAATCACGATAAGCCACTCTGGATCCTTAACTCTCTCACCATCCTGTTGTGGGTCGCGAAGAGATCCAATGTCCACACTATTTGCTAACTTGATATCGTCCTCAGTTCGTCGCCTGATGAATACTGGTTTTCCACGCCACTTAACGGTCACGGTGGAACCAGGCTCGATGCTTGAGAGGTCAACCTCAATTGAGGCCAGGGCAAGAACATCCTTACTGGCTGACATGCTAAGAACAAATTTGAGAACAAGGAGTCGAATCAGAGAAGCATAG

Protein sequence

MQPRCVQTPITISHSGSLTLSPSCCGSRRDPMSTLFANLISSSVRRLMNTGFPRHLTVTVEPGSMLERSTSIEARARTSLLADMLRTNLRTRSRIREA

Homology

[Close]

BLAST of Sgr025898 vs. NCBI nr
Match: KAF7801863.1 (hypothetical protein G2W53_040974 [Senna tora])

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-12
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 0


Query: 19 TLSPSCCGSRRDPMSTLFANLISSSVRRLMNTGFPRHLTVTVEPGSMLERSTSIEAR 76
          +LS S CGSRRD +STLFANL+SSSV   MNTGFPRHLTVTV P SMLERSTS EA+
Sbjct: 39 SLSASSCGSRRDSISTLFANLMSSSVLLRMNTGFPRHLTVTVVPVSMLERSTSSEAK 95

[Close]

BLAST of Sgr025898 vs. ExPASy TrEMBL
Match: A0A0A9JEF6 (UCRI OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13
Identity = 46/59 (77.97%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 40 ISSSVRRLMNTGFPRHLTVTVEPGSMLERSTSIEARARTSLLADMLRTNLRTRSRIREA 99
          +SSSVRRLMNTGFPRH TVTV PGS+LERSTSIEARA TSLLAD+LRTN   R R  +A
Sbjct: 1  MSSSVRRLMNTGFPRHFTVTVVPGSILERSTSIEARASTSLLADILRTNFNMRRRSSDA 59

[Close]

BLAST of Sgr025898 vs. ExPASy TrEMBL
Match: A0A0A9GHA4 (Isp1 OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.7e-13
Identity = 47/67 (70.15%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 32 MSTLFANLISSSVRRLMNTGFPRHLTVTVEPGSMLERSTSIEARARTSLLADMLRTNLRT 91
          MSTL A+L+SSSV RLM TG P H TVTV PGSMLERSTS EA A TSLLAD+LRTN + 
Sbjct: 1  MSTLLASLMSSSVLRLMKTGLPLHFTVTVGPGSMLERSTSREASASTSLLADILRTNFKM 60

Query: 92 RSRIREA 99
            R +EA
Sbjct: 61 SKRSKEA 67

[Close]

BLAST of Sgr025898 vs. ExPASy TrEMBL
Match: A0A0A9EPE6 (Isp1 OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.7e-13
Identity = 47/67 (70.15%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 32 MSTLFANLISSSVRRLMNTGFPRHLTVTVEPGSMLERSTSIEARARTSLLADMLRTNLRT 91
          MSTL A+L+SSSV RLM TG P H TVTV PGSMLERSTS EA A TSLLAD+LRTN + 
Sbjct: 1  MSTLLASLMSSSVLRLMKTGLPLHFTVTVVPGSMLERSTSREASASTSLLADILRTNFKM 60

Query: 92 RSRIREA 99
            R +EA
Sbjct: 61 SKRSKEA 67

[Close]

BLAST of Sgr025898 vs. ExPASy TrEMBL
Match: A0A0A9I9R1 (Isp1 OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 9.7e-12
Identity = 46/67 (68.66%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 32 MSTLFANLISSSVRRLMNTGFPRHLTVTVEPGSMLERSTSIEARARTSLLADMLRTNLRT 91
          MSTL A+L+SSSV RLM TG P   TVTV PGSMLERSTS EA A TSLLAD+LRTN + 
Sbjct: 1  MSTLLASLMSSSVLRLMKTGLPLPFTVTVVPGSMLERSTSREASASTSLLADILRTNFKM 60

Query: 92 RSRIREA 99
            R +EA
Sbjct: 61 SKRSKEA 67

The following BLAST results are available for this feature:

BLAST of Sgr025898 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF7801863.1	2.4e-12	77.19	hypothetical protein G2W53_040974 [Senna tora]	[more]

BLAST of Sgr025898 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr025898 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A9JEF6	1.3e-13	77.97	UCRI OS=Arundo donax OX=35708 PE=4 SV=1	[more]
A0A0A9GHA4	6.7e-13	70.15	Isp1 OS=Arundo donax OX=35708 PE=4 SV=1	[more]
A0A0A9EPE6	6.7e-13	70.15	Isp1 OS=Arundo donax OX=35708 PE=4 SV=1	[more]
A0A0A9I9R1	9.7e-12	68.66	Isp1 OS=Arundo donax OX=35708 PE=4 SV=1	[more]

BLAST of Sgr025898 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr025898.1	Sgr025898.1	mRNA